Citrus Sinensis ID: 037274

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
Protein Sequence
VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHccccccccEEEEEEEccEEEEEEcccccccHHHHHHcccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEcccccEEEEcccccccccccccHHHHHHcccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccHHcccccHHHHHHHHHHHHHcccccEEEEEEcEEccccEEEEEEccccccHHHHHHcccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccEcccHHEEEEcccccEEEEEcccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEccccccccccccccHHHcccccccccHHHHHHHHHHHcccccccccHHHHHHccccccc
Coil and Loop (DISEMBL)
VIDINHQAEEYAKLAREIYRYKhlshpniipIYKTMISQRQLFYAEIACMIGsldsimtyrplnspaaTQLIMSNRHRYGITVDCLAIAHKETLKGLsylqgeglfhknisaghilhnifnddtrnwisssssittwaaapevvnfgddyyscksdiWLIGITalqfpcgglpvsrrqDLDIMTKMLmkqpkstslqvapnedtthgtrTLSKNFWNMVKIclapdpakrpAAEAQVLQEMWHFR
Flexible Loop (DISEMBL)
VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMkqpkstslqvapnedtthgtRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR
Low Complexity Region (SEG)
VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNwisssssittwaaaPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR
Disordered region (IsUnstruct)
*********EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIM**************************TLSKNFWNMVKICLA*********************
Disordered Region (DISOPRED)
VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKS****************TLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR
Disordered Region (DISEMBL)
VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQ***************HGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV********
Disordered Region (DISPRO)
VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP******************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	245	2.2.26 [Sep-21-2011]
Q9UEW8	545	STE20/SPS1-related prolin	yes	no	0.861	0.387	0.261	9e-16
O88506	553	STE20/SPS1-related prolin	yes	no	0.861	0.381	0.261	9e-16
Q9Z1W9	556	STE20/SPS1-related prolin	yes	no	0.861	0.379	0.261	9e-16
Q863I2	529	Serine/threonine-protein	no	no	0.840	0.389	0.263	1e-15
Q5R495	527	Serine/threonine-protein	yes	no	0.840	0.390	0.263	2e-15
Q6P9R2	527	Serine/threonine-protein	no	no	0.840	0.390	0.263	2e-15
O95747	527	Serine/threonine-protein	no	no	0.840	0.390	0.263	2e-15
Q55GC2	1142	Serine/threonine-protein	yes	no	0.816	0.175	0.258	2e-10
P08458	490	Sporulation-specific prot	yes	no	0.836	0.418	0.274	2e-10
Q8BPM2	847	Mitogen-activated protein	no	no	0.820	0.237	0.266	3e-10

>sp|Q9UEW8|STK39_HUMAN STE20/SPS1-related proline-alanine-rich protein kinase OS=Homo sapiens GN=STK39 PE=1 SV=3

 Score = 84.0 bits (206), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 34/245 (13%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           +L +EI      SHPN++  Y + + + +L+        GS+  I+ Y          ++
Sbjct: 105 ELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKY----------IV 154

Query: 73  MSNRHRYGITVDCL-AIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
               H+ G+  + + A   KE L+GL YL   G  H+++ AG+IL               
Sbjct: 155 NRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVS 214

Query: 119 ----IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                  D TRN +  +   T    APEV+     Y   K+D+W  GITA++   G  P 
Sbjct: 215 AFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADMWSFGITAIELATGAAPY 273

Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
            +   + ++   L   P +    V   E      +   K+F  ++ +CL  DP+KRP A 
Sbjct: 274 HKYPPMKVLMLTLQNDPPTLETGVEDKE----MMKKYGKSFRKLLSLCLQKDPSKRPTA- 328

Query: 235 AQVLQ 239
           A++L+
Sbjct: 329 AELLK 333

May act as a mediator of stress-activated signals.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O88506|STK39_RAT STE20/SPS1-related proline-alanine-rich protein kinase OS=Rattus norvegicus GN=Stk39 PE=2 SV=2

 Score = 84.0 bits (206), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 34/245 (13%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           +L +EI      SHPN++  Y + + + +L+        GS+  I+ Y          ++
Sbjct: 114 ELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKY----------IV 163

Query: 73  MSNRHRYGITVDCL-AIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
               H+ G+  + + A   KE L+GL YL   G  H+++ AG+IL               
Sbjct: 164 NRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVS 223

Query: 119 ----IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                  D TRN +  +   T    APEV+     Y   K+D+W  GITA++   G  P 
Sbjct: 224 AFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADMWSFGITAIELATGAAPY 282

Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
            +   + ++   L   P +    V   E      +   K+F  ++ +CL  DP+KRP A 
Sbjct: 283 HKYPPMKVLMLTLQNDPPTLETGVEDKE----MMKKYGKSFRKLLSLCLQKDPSKRPTA- 337

Query: 235 AQVLQ 239
           A++L+
Sbjct: 338 AELLK 342

May act as a mediator of stress-activated signals.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Z1W9|STK39_MOUSE STE20/SPS1-related proline-alanine-rich protein kinase OS=Mus musculus GN=Stk39 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 34/245 (13%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           +L +EI      SHPN++  Y + + + +L+        GS+  I+ Y          ++
Sbjct: 117 ELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKY----------IV 166

Query: 73  MSNRHRYGITVDCL-AIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
               H+ G+  + + A   KE L+GL YL   G  H+++ AG+IL               
Sbjct: 167 NRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVS 226

Query: 119 ----IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                  D TRN +  +   T    APEV+     Y   K+D+W  GITA++   G  P 
Sbjct: 227 AFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADMWSFGITAIELATGAAPY 285

Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
            +   + ++   L   P +    V   E      +   K+F  ++ +CL  DP+KRP A 
Sbjct: 286 HKYPPMKVLMLTLQNDPPTLETGVEDKE----MMKKYGKSFRKLLSLCLQKDPSKRPTA- 340

Query: 235 AQVLQ 239
           A++L+
Sbjct: 341 AELLK 345

May act as a mediator of stress-activated signals.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q863I2|OXSR1_PIG Serine/threonine-protein kinase OSR1 OS=Sus scrofa GN=OXSR1 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 33/239 (13%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct: 59  ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query: 73  MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
               H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL               
Sbjct: 109 AKGEHKSGVLDEATIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query: 119 ----IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                  D TRN +  +   T    APEV+     Y   K+DIW  GITA++   G  P 
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
            +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A
Sbjct: 228 HKYPPMKVLMLTLQNDPPSLETGVQDKE----MLKKYGKSFRKMISLCLQKDPEKRPTA 282

Regulates downstream kinases in response to environmental stress. May also have a function in regulating the actin cytoskeleton.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5R495|OXSR1_PONAB Serine/threonine-protein kinase OSR1 OS=Pongo abelii GN=OXSR1 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 33/239 (13%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct: 59  ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query: 73  MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
               H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL               
Sbjct: 109 AKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query: 119 ----IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                  D TRN +  +   T    APEV+     Y   K+DIW  GITA++   G  P 
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
            +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A
Sbjct: 228 HKYPPMKVLMLTLQNDPPSLETGVQDKE----MLKKYGKSFRKMISLCLQKDPEKRPTA 282

Regulates downstream kinases in response to environmental stress. May also have a function in regulating the actin cytoskeleton.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6P9R2|OXSR1_MOUSE Serine/threonine-protein kinase OSR1 OS=Mus musculus GN=Oxsr1 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 33/239 (13%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct: 59  ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query: 73  MSNRHRYGITVD-CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
               H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL               
Sbjct: 109 AKGEHKSGVLDEPTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query: 119 ----IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                  D TRN +  +   T    APEV+     Y   K+DIW  GITA++   G  P 
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
            +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A
Sbjct: 228 HKYPPMKVLMLTLQNDPPSLETGVQDKE----MLKKYGKSFRKMISLCLQKDPEKRPTA 282

Regulates downstream kinases in response to environmental stress. May also have a function in regulating the actin cytoskeleton.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O95747|OXSR1_HUMAN Serine/threonine-protein kinase OSR1 OS=Homo sapiens GN=OXSR1 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 33/239 (13%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct: 59  ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query: 73  MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
               H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL               
Sbjct: 109 AKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query: 119 ----IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                  D TRN +  +   T    APEV+     Y   K+DIW  GITA++   G  P 
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
            +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A
Sbjct: 228 HKYPPMKVLMLTLQNDPPSLETGVQDKE----MLKKYGKSFRKMISLCLQKDPEKRPTA 282

Regulates downstream kinases in response to environmental stress. May also have a function in regulating the actin cytoskeleton.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q55GC2|DST2_DICDI Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 96/240 (40%), Gaps = 40/240 (16%)

Query: 7   QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSP 66
           + E +  L  EI      +H NI+  Y + +   +LF A   C  GS+  I  Y+ LN P
Sbjct: 55  EDETFEDLVVEIDILNRCNHNNIVKYYGSWVKGDELFIAMECCGGGSITEI--YQELNIP 112

Query: 67  AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND---- 122
                I              A   +ETLKGL YL    + H+++   +IL     D    
Sbjct: 113 LNESQI--------------AYVCRETLKGLEYLHHTNVIHRDLKGANILLTESGDVKLA 158

Query: 123 --DTRNWISSSSSITTWAA-----APEVVNFGDD--YYSCKSDIWLIGITALQFPCGGLP 173
                  +  SS   T+       APEV+    +   Y  K+DIW +GIT ++      P
Sbjct: 159 DFGVSGLLDKSSKRNTFIGTPYWMAPEVIENRSNPVPYDTKADIWSLGITLIELAEAEPP 218

Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
           +S    + ++ ++  + P     Q              SK+F N ++ CL  DP +R  A
Sbjct: 219 LSEIHPMKVLFQIPYRDPPKLKNQ-----------ENYSKDFINFIQSCLQKDPNQRKTA 267

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P08458|SPS1_YEAST Sporulation-specific protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPS1 PE=1 SV=2

 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 39/244 (15%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           V+++ H  E+   LA+EI+    L  P I     TM+    ++     C  GS   ++  
Sbjct: 48  VVNLEHSDEDIELLAQEIFFLAELKSPLITNYIATMLEDVSMWIVMEYCGGGSCSDLLKR 107

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-- 118
             +N     ++                I H+ TL GL YL  +   H++I A +IL N  
Sbjct: 108 SYVNGLPEEKVSF--------------IIHEVTL-GLKYLHEQRKIHRDIKAANILLNEE 152

Query: 119 ----IFNDDTRNWISSSSSITTWAA-----APEVVNFGDDYYSCKSDIWLIGITALQFPC 169
               + +      I S+    T+       APEVV    D Y+ K+DIW +GIT  +   
Sbjct: 153 GMVKLGDFGVSGHIRSTLKRDTFVGTPYWMAPEVVCCEVDGYNEKADIWSLGITTYELLK 212

Query: 170 GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK 229
           G  P+S+   + +MT +  ++P    LQ  P  D        +K+F   V  CL   PA 
Sbjct: 213 GLPPLSKYDPMKVMTNLPKRKP--PKLQ-GPFSDA-------AKDF---VAGCLVKTPAD 259

Query: 230 RPAA 233
           RP+A
Sbjct: 260 RPSA 263

Serine/threonine protein kinase required for spore wall development.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8BPM2|M4K5_MOUSE Mitogen-activated protein kinase kinase kinase kinase 5 OS=Mus musculus GN=Map4k5 PE=2 SV=2

 Score = 65.5 bits (158), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 39/240 (16%)

Query: 8   AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPA 67
            ++++ + +EI+  K   H NI+  + + +S+ +L+     C  GSL  I     +  P 
Sbjct: 56  GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYH---VTGPL 112

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNW 127
           +   I              A   +ETL+GL+YL  +G  H++I   +IL     D     
Sbjct: 113 SEMQI--------------AYVCRETLQGLAYLHTKGKMHRDIKGANILLTDHGDVKLAD 158

Query: 128 ISSSSSITTWAA------------APEVVNF-GDDYYSCKSDIWLIGITALQFPCGGLPV 174
              ++ IT   A            APEV     +  Y+   DIW +GITA++      P+
Sbjct: 159 FGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELGELQPPM 218

Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
               DL  M  + +     ++ Q    +D T  + T    F N VKI L  +P KRP AE
Sbjct: 219 F---DLHPMRALFLMS--KSNFQPPKLKDKTKWSST----FHNFVKIALTKNPKKRPTAE 269

May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
297800792	476	kinase family protein [Arabidopsis lyrat	0.885	0.455	0.298	3e-18
15233460	487	protein kinase family protein [Arabidops	0.885	0.445	0.294	7e-18
356547349	566	PREDICTED: serine/threonine-protein kina	0.873	0.378	0.295	2e-17
449433273	531	PREDICTED: serine/threonine-protein kina	0.873	0.403	0.286	7e-17
296083588	453	unnamed protein product [Vitis vinifera]	0.869	0.470	0.290	1e-16
328769386	409	hypothetical protein BATDEDRAFT_19935 [B	0.889	0.533	0.260	6e-16
410968984	478	PREDICTED: STE20/SPS1-related proline-al	0.861	0.441	0.265	8e-16
301112264	377	protein kinase, putative [Phytophthora i	0.877	0.570	0.276	1e-15
325187964	375	protein kinase putative [Albugo laibachi	0.877	0.573	0.284	1e-15
348686320	377	protein kinase [Phytophthora sojae]	0.877	0.570	0.276	1e-15

>gi|297800792|ref|XP_002868280.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297314116|gb|EFH44539.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 112/255 (43%), Gaps = 38/255 (14%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
           ID++    ++  L RE      LSHPNI+  Y +    R L+        GSL SI++  
Sbjct: 47  IDLDQSRADFDSLRRETKTMSLLSHPNILNAYCSFTVDRCLWVVMPFMSCGSLHSIVSSS 106

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN 121
             N               G+  +C+++  KETL  +SYL  +G  H++I AG+IL +   
Sbjct: 107 FPN---------------GLPENCISVFLKETLSAISYLHDQGHLHRDIKAGNILVDSDG 151

Query: 122 DDTRNWISSSSSI----------------------TTWAAAPEVVNFGDDYYSCKSDIWL 159
                    S+SI                      T +  APEVV+     Y  K+DIW 
Sbjct: 152 SVKLADFGVSASIYEPVTSSSGTTSSSLRLTDIAGTPYWMAPEVVH-SHTGYGFKADIWS 210

Query: 160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMV 219
            GITAL+   G  P+S    L  +   + K+      ++  +  +  G +  SK F  MV
Sbjct: 211 FGITALELAHGRPPLSHLPPLKSLLMKITKRFHFADYEINTSGSSKKGNKKFSKAFREMV 270

Query: 220 KICLAPDPAKRPAAE 234
            +CL  DPAKRP+AE
Sbjct: 271 GLCLEQDPAKRPSAE 285

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15233460|ref|NP_193184.1| protein kinase family protein [Arabidopsis thaliana] gi|2244804|emb|CAB10227.1| kinase like protein [Arabidopsis thaliana] gi|7268154|emb|CAB78490.1| kinase like protein [Arabidopsis thaliana] gi|332658049|gb|AEE83449.1| protein kinase family protein [Arabidopsis thaliana]

 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 112/255 (43%), Gaps = 38/255 (14%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
           ID++    ++  L RE      LSHPNI+  Y +    R L+        GSL SI+   
Sbjct: 47  IDLDQSRADFDSLRRETKTMSLLSHPNILNAYCSFTVDRCLWVVMPFMSCGSLHSIV--- 103

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN 121
                       S+    G+  +C+++  KETL  +SYL  +G  H++I AG+IL +   
Sbjct: 104 ------------SSSFPSGLPENCISVFLKETLNAISYLHDQGHLHRDIKAGNILVDSDG 151

Query: 122 DDTRNWISSSSSI----------------------TTWAAAPEVVNFGDDYYSCKSDIWL 159
                    S+SI                      T +  APEVV+     Y  K+DIW 
Sbjct: 152 SVKLADFGVSASIYEPVTSSSGTTSSSLRLTDIAGTPYWMAPEVVH-SHTGYGFKADIWS 210

Query: 160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMV 219
            GITAL+   G  P+S    L  +   + K+   +  ++  +  +  G +  SK F  MV
Sbjct: 211 FGITALELAHGRPPLSHLPPLKSLLMKITKRFHFSDYEINTSGSSKKGNKKFSKAFREMV 270

Query: 220 KICLAPDPAKRPAAE 234
            +CL  DP KRP+AE
Sbjct: 271 GLCLEQDPTKRPSAE 285

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547349|ref|XP_003542076.1| PREDICTED: serine/threonine-protein kinase fray2-like [Glycine max]

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 113/254 (44%), Gaps = 40/254 (15%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
           ID++    +   + RE      LSHPNI+  + +    R+L+                  
Sbjct: 57  IDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLW---------------VVM 101

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN 121
           P  +  + Q I+S+ H  G+T  C+A+  ++TL  LSYL G+G  H++I AG+IL +   
Sbjct: 102 PFMAAGSLQSIISHSHPNGLTEPCIAVVLRDTLNALSYLHGQGHLHRDIKAGNILVDTNG 161

Query: 122 DDTRNWISSSSSI--------------------TTWAAAPEVVNFGDDYYSCKSDIWLIG 161
                    S+SI                    T +  APEV++     YS K+DIW  G
Sbjct: 162 QVKLADFGVSASIYESTTTTSSSSSLKFTDVAGTPYWMAPEVIH-SHTGYSFKADIWSFG 220

Query: 162 ITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGT-RTLSKNFWNMVK 220
           ITAL+   G  P+S    L     M++K  K        ++    G  +  SK F +MV 
Sbjct: 221 ITALELAHGRPPLSH---LPPSKSMMLKITKRFRFSDDFDDKYRKGNGKKFSKAFKDMVA 277

Query: 221 ICLAPDPAKRPAAE 234
            CL  DP+KRP A+
Sbjct: 278 SCLDQDPSKRPTAD 291

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433273|ref|XP_004134422.1| PREDICTED: serine/threonine-protein kinase fray2-like [Cucumis sativus] gi|449528635|ref|XP_004171309.1| PREDICTED: serine/threonine-protein kinase fray2-like [Cucumis sativus]

 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 44/258 (17%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
           ID++    ++  + RE      LSHPNI+  + +    R+L+                  
Sbjct: 72  IDLDRSRADFDDIRREAKILSLLSHPNILNSHCSFTVDRRLW---------------VVM 116

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL----- 116
           P  S  + Q I+++    G+   C+AI  +E L  LSYL  +G  H++I AG+IL     
Sbjct: 117 PFMSAGSLQSIITSSFPDGLPEPCIAIVLREILHALSYLHDQGHLHRDIKAGNILIDSNG 176

Query: 117 ----------HNIFNDDTRNWIS---SSSSI-------TTWAAAPEVVNFGDDYYSCKSD 156
                      +IF  +++  +S    S+SI       T +  APEV++   + YS K+D
Sbjct: 177 SIKLADFGVSTSIFESNSKQGVSISPLSTSIMLKEVAGTPYWMAPEVIH-SHNGYSLKAD 235

Query: 157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFW 216
           IW  GITAL+   G  P+S    L     +L+K  +        N   +      SK F 
Sbjct: 236 IWSFGITALELAHGRPPLSH---LPPSKSLLLKITRRFRFSDYENHHNSKNKNKFSKGFK 292

Query: 217 NMVKICLAPDPAKRPAAE 234
            +V  CL P+P++RP AE
Sbjct: 293 ELVASCLDPEPSRRPCAE 310

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296083588|emb|CBI23577.3| unnamed protein product [Vitis vinifera]

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 28/241 (11%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
           ID++    +   + RE+     LSHPNI+  +               C       +    
Sbjct: 53  IDLDQSRADLDSVLREVKTMSLLSHPNILRAH---------------CSFAVDHRLWVVM 97

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-- 119
           P  S  + Q I+ +    G+   C+AI  KETL  LSYL  +G  H++I AG+IL +   
Sbjct: 98  PFMSAGSLQSIIGSSFPDGLPEPCIAIVLKETLNALSYLHDQGHLHRDIKAGNILVDSTG 157

Query: 120 ------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
                 F      + S++ + T +  APEV++     YS K+DIW  GITAL+   G  P
Sbjct: 158 TVKLADFGVSALIYESNTITGTPYWMAPEVIH-SHTGYSLKADIWSFGITALELAHGRPP 216

Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
           +S       +   + K+ + +  + + +E +       SK+F +MV  CL  DP+KRP+A
Sbjct: 217 LSHLPPSKSLVMKITKRFRFSDYEQSRSEQSP----KFSKSFKDMVASCLDQDPSKRPSA 272

Query: 234 E 234
           +
Sbjct: 273 D 273

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|328769386|gb|EGF79430.1| hypothetical protein BATDEDRAFT_19935 [Batrachochytrium dendrobatidis JAM81]

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 43/261 (16%)

Query: 1   VIDIN-HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGS-LDSIM 58
           VID++  +  +  +L REI       HPN++P+Y + ++  +LF        GS LD   
Sbjct: 143 VIDLDLFERNQIDELRREIQIMSLSKHPNLLPVYGSFVNGSKLFIVTPFLAGGSCLD--- 199

Query: 59  TYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-- 116
                        IM    + G     +A   K+ L+GL YL   GL H+++ AG++L  
Sbjct: 200 -------------IMKTSFKEGFDEVSIATILKQALQGLDYLHKNGLIHRDVKAGNLLID 246

Query: 117 -------------HNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGIT 163
                         ++ +   R  +  +   T    APEV+      Y+ K+DIW  GIT
Sbjct: 247 KDGLVQLADFGVSSSLMDAGDRRGLRKTFVGTPCWMAPEVME--QSGYNYKADIWSFGIT 304

Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL 223
           +L+      P ++   L ++   L  +P +       + D+T G    S+ F +M+ +CL
Sbjct: 305 SLELANAQAPYAKFPPLKVLMLTLQNEPPTL------DRDSTRG--RFSRQFKDMIDMCL 356

Query: 224 APDPAKRPAAEAQVLQEMWHF 244
             DPA+RP  E  +    + F
Sbjct: 357 KKDPARRPTTEKLLQHSFFKF 377

Source: Batrachochytrium dendrobatidis JAM81

Species: Batrachochytrium dendrobatidis

Genus: Batrachochytrium

Order: Rhizophydiales

Class: Chytridiomycetes

Phylum: Chytridiomycota

Superkingdom: Eukaryota

>gi|410968984|ref|XP_003990979.1| PREDICTED: STE20/SPS1-related proline-alanine-rich protein kinase [Felis catus]

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 34/245 (13%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           +L +EI      SHPN++  Y + + + +LF   ++  +GS+  I+ Y          ++
Sbjct: 39  ELLKEIQAMSQCSHPNVVTYYTSFVVKDELFSILLSLHLGSMLDIIKY----------IV 88

Query: 73  MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
               H+ G+  +  +A   KE L+GL YL   G  H+++ AG+IL               
Sbjct: 89  NRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGEDGSVQIADFGVS 148

Query: 119 ----IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                  D TRN +  +   T    APEV+      Y  K+D+W  GITA++   G  P 
Sbjct: 149 AFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADMWSFGITAIELATGAAPY 207

Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
            +   + ++   L   P +    V   E      +   K+F  ++ +CL  DP+KRP A 
Sbjct: 208 HKYPPMKVLMLTLQNDPPTLETGVEDKE----MMKKYGKSFRKLLSLCLQKDPSKRPTA- 262

Query: 235 AQVLQ 239
           A++L+
Sbjct: 263 AELLK 267

Source: Felis catus

Species: Felis catus

Genus: Felis

Family: Felidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301112264|ref|XP_002905211.1| protein kinase, putative [Phytophthora infestans T30-4] gi|262095541|gb|EEY53593.1| protein kinase, putative [Phytophthora infestans T30-4]

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 38/253 (15%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           ++D+      +  +  E+   K  +HPN++  Y + + + QL+        GS   +M  
Sbjct: 42  IMDLEKITTSFEDIRAEVQTMKMTNHPNVLKCYCSFVHKDQLWLVTQLMNKGSCLHVMN- 100

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL---- 116
                     L+       G+  + +A+   ETLKGL Y    G  H++I AG+IL    
Sbjct: 101 ----------LLKKKGLGEGLKEEFVAVILNETLKGLQYFHENGQIHRDIKAGNILLDSE 150

Query: 117 -HNIFND-----------DTRNWISSSSSITTWAAAPEVVN--FGDDYYSCKSDIWLIGI 162
            H +  D           D R    +      W A PEV+    G DY   K+DIW +GI
Sbjct: 151 GHVVIADFGVSGWMMEGGDRRKNRQTFVGTPCWMA-PEVMEQVRGYDY---KADIWSLGI 206

Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
           TAL+   G  P +R Q + ++   L + P   SL+   ++ + H      ++F ++VK+C
Sbjct: 207 TALELAKGYAPYARFQPMKVLLLTLQEDP--PSLRTYDDDGSGH---QFGRHFKDVVKLC 261

Query: 223 LAPDPAKRPAAEA 235
           L  DP+KRP   A
Sbjct: 262 LQKDPSKRPGTSA 274

Source: Phytophthora infestans T30-4

Species: Phytophthora infestans

Genus: Phytophthora

Order: Peronosporales

Superkingdom: Eukaryota

>gi|325187964|emb|CCA22508.1| protein kinase putative [Albugo laibachii Nc14]

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 38/253 (15%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           ++D+      +  +  E+   K  +HPN++  Y + + + QL+        GS   +M  
Sbjct: 43  IMDLEKITTSFEDIRAEVQTMKMTNHPNVLKCYCSFVHRDQLWLVTQLMNKGSCLHVMN- 101

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL---- 116
                     ++       G+  + LA+   ETLKGL Y    G  H++I AG+IL    
Sbjct: 102 ----------VLKKKGLGEGLKEEFLAVILHETLKGLQYFHENGQIHRDIKAGNILMDSQ 151

Query: 117 -HNIFND-----------DTRNWISSSSSITTWAAAPEVVN--FGDDYYSCKSDIWLIGI 162
            H +  D           D R    +      W  APEV+    G DY   K+DIW  GI
Sbjct: 152 GHVVIADFGVSGWMMEGGDRRKNRQTFVGTPCW-MAPEVMEQVRGYDY---KADIWSFGI 207

Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
           TAL+   G  P +R Q + ++   L + P   SL+   ++ T H     S++F ++VK C
Sbjct: 208 TALELAKGYAPYARFQPMKVLLLTLQEDP--PSLRTYDDDGTGH---EFSRHFRDVVKNC 262

Query: 223 LAPDPAKRPAAEA 235
           L  DP +RPA  A
Sbjct: 263 LQKDPTRRPATSA 275

Source: Albugo laibachii Nc14

Species: Albugo laibachii

Genus: Albugo

Family: Albuginaceae

Order: Albuginales

Superkingdom: Eukaryota

>gi|348686320|gb|EGZ26135.1| protein kinase [Phytophthora sojae]

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 38/253 (15%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           ++D+      +  +  E+   K  +HPN++  Y + + + QL+        GS   +M  
Sbjct: 42  IMDLEKITTSFEDIRAEVQTMKMTNHPNVLKCYCSFVHKDQLWLVTQLMNKGSCLHVMN- 100

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL---- 116
                     L+       G+  + +A+   ETLKGL Y    G  H++I AG+IL    
Sbjct: 101 ----------LLKKKGLGEGLKEEFVAVILHETLKGLQYFHENGQIHRDIKAGNILLDSE 150

Query: 117 -HNIFND-----------DTRNWISSSSSITTWAAAPEVVN--FGDDYYSCKSDIWLIGI 162
            H +  D           D R    +      W A PEV+    G DY   K+DIW +GI
Sbjct: 151 GHVVIADFGVSGWMMEGGDRRKNRQTFVGTPCWMA-PEVMEQVRGYDY---KADIWSLGI 206

Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
           TAL+   G  P +R Q + ++   L + P   SL+   ++ + H      ++F ++VK+C
Sbjct: 207 TALELAKGYAPYARFQPMKVLLLTLQEDP--PSLRTYDDDGSGH---QFGRHFKDVVKLC 261

Query: 223 LAPDPAKRPAAEA 235
           L  DP+KRP   A
Sbjct: 262 LQKDPSKRPGTSA 274

Source: Phytophthora sojae

Species: Phytophthora sojae

Genus: Phytophthora

Order: Peronosporales

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
TAIR|locus:2129780	487	AT4G14480 [Arabidopsis thalian	0.379	0.190	0.361	9.5e-17
UNIPROTKB|D4A6U6	457	Oxsr1 "Protein Oxsr1" [Rattus	0.861	0.461	0.268	7.5e-16
UNIPROTKB|F1MYV9	527	OXSR1 "Uncharacterized protein	0.861	0.400	0.265	5.6e-14
UNIPROTKB|E2RAI8	527	OXSR1 "Uncharacterized protein	0.861	0.400	0.265	7.2e-14
UNIPROTKB|Q863I2	529	OXSR1 "Serine/threonine-protei	0.861	0.398	0.261	1.2e-13
UNIPROTKB|C9JIG9	468	OXSR1 "Serine/threonine-protei	0.861	0.450	0.261	1.2e-13
UNIPROTKB|O95747	527	OXSR1 "Serine/threonine-protei	0.861	0.400	0.261	1.5e-13
UNIPROTKB|Q5R495	527	OXSR1 "Serine/threonine-protei	0.861	0.400	0.261	1.5e-13
MGI|MGI:1917378	527	Oxsr1 "oxidative-stress respon	0.861	0.400	0.261	1.5e-13
RGD|1310466	470	Oxsr1 "oxidative-stress respon	0.857	0.446	0.262	2e-13

TAIR|locus:2129780 AT4G14480 [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query:   141 PEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP 200
             PEVV+     Y  K+DIW  GITAL+   G  P+S    L  +   + K+   +  ++  
Sbjct:   193 PEVVH-SHTGYGFKADIWSFGITALELAHGRPPLSHLPPLKSLLMKITKRFHFSDYEINT 251

Query:   201 NEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
             +  +  G +  SK F  MV +CL  DP KRP+AE
Sbjct:   252 SGSSKKGNKKFSKAFREMVGLCLEQDPTKRPSAE 285

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|D4A6U6 Oxsr1 "Protein Oxsr1" [Rattus norvegicus (taxid:10116)]

 Score = 205 (77.2 bits), Expect = 7.5e-16, P = 7.5e-16
 Identities = 62/231 (26%), Positives = 99/231 (42%)

Query:    13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
             +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct:     3 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 52

Query:    73 MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF---NDDTRNXX 128
                 H+ G+  +  +A   +E L+GL YL   G  H+   AG++ H       D TRN  
Sbjct:    53 AKGEHKGGVLDESTIATILREVLEGLEYLHKNGQIHRCEGAGNLAHAFLATGGDITRNKV 112

Query:   129 XXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLM 188
                         PEV+     Y   K+DIW  GITA++   G  P  +   + ++   L 
Sbjct:   113 RKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ 171

Query:   189 KQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
               P S    V   E      +   K+F  M+ +CL  DP KRP A A++L+
Sbjct:   172 NDPPSLDTGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTA-AELLR 217

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1MYV9 OXSR1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 189 (71.6 bits), Expect = 5.6e-14, P = 5.6e-14
 Identities = 65/245 (26%), Positives = 103/245 (42%)

Query:    13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
             +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct:    59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query:    73 MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILH-------------N 118
                 H+ G+  +  +A   KE L+GL YL   G  H+++ AG+IL              +
Sbjct:   109 AKGEHKNGVLDEATIATILKEVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query:   119 IF----NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
              F     D TRN              PEV+     Y   K+DIW  GITA++   G  P 
Sbjct:   169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query:   175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
              +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A 
Sbjct:   228 HKYPPMKVLMLTLQNDPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTA- 282

Query:   235 AQVLQ 239
             A++L+
Sbjct:   283 AELLR 287

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|E2RAI8 OXSR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 188 (71.2 bits), Expect = 7.2e-14, P = 7.2e-14
 Identities = 65/245 (26%), Positives = 103/245 (42%)

Query:    13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
             +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct:    59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query:    73 MSNRHRYGITVD-CLAIAHKETLKGLSYLQGEGLFHKNISAGHILH-------------N 118
                 H+ G+  +  +A   KE L+GL YL   G  H+++ AG+IL              +
Sbjct:   109 AKGEHKSGVLDEPTIATILKEVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query:   119 IF----NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
              F     D TRN              PEV+     Y   K+DIW  GITA++   G  P 
Sbjct:   169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query:   175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
              +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A 
Sbjct:   228 HKYPPMKVLMLTLQNDPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTA- 282

Query:   235 AQVLQ 239
             A++L+
Sbjct:   283 AELLR 287

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

UNIPROTKB|Q863I2 OXSR1 "Serine/threonine-protein kinase OSR1" [Sus scrofa (taxid:9823)]

 Score = 186 (70.5 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 64/245 (26%), Positives = 103/245 (42%)

Query:    13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
             +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct:    59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query:    73 MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILH-------------N 118
                 H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL              +
Sbjct:   109 AKGEHKSGVLDEATIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query:   119 IF----NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
              F     D TRN              PEV+     Y   K+DIW  GITA++   G  P 
Sbjct:   169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query:   175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
              +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A 
Sbjct:   228 HKYPPMKVLMLTLQNDPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTA- 282

Query:   235 AQVLQ 239
             A++L+
Sbjct:   283 AELLR 287

GO:0007243 "intracellular protein kinase cascade" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|C9JIG9 OXSR1 "Serine/threonine-protein kinase OSR1" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 64/245 (26%), Positives = 103/245 (42%)

Query:    13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
             +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct:    59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query:    73 MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILH-------------N 118
                 H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL              +
Sbjct:   109 AKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query:   119 IF----NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
              F     D TRN              PEV+     Y   K+DIW  GITA++   G  P 
Sbjct:   169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query:   175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
              +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A 
Sbjct:   228 HKYPPMKVLMLTLQNDPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTA- 282

Query:   235 AQVLQ 239
             A++L+
Sbjct:   283 AELLR 287

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|O95747 OXSR1 "Serine/threonine-protein kinase OSR1" [Homo sapiens (taxid:9606)]

 Score = 185 (70.2 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 64/245 (26%), Positives = 103/245 (42%)

Query:    13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
             +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct:    59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query:    73 MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILH-------------N 118
                 H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL              +
Sbjct:   109 AKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query:   119 IF----NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
              F     D TRN              PEV+     Y   K+DIW  GITA++   G  P 
Sbjct:   169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query:   175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
              +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A 
Sbjct:   228 HKYPPMKVLMLTLQNDPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTA- 282

Query:   235 AQVLQ 239
             A++L+
Sbjct:   283 AELLR 287

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

UNIPROTKB|Q5R495 OXSR1 "Serine/threonine-protein kinase OSR1" [Pongo abelii (taxid:9601)]

 Score = 185 (70.2 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 64/245 (26%), Positives = 103/245 (42%)

Query:    13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
             +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct:    59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query:    73 MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILH-------------N 118
                 H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL              +
Sbjct:   109 AKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query:   119 IF----NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
              F     D TRN              PEV+     Y   K+DIW  GITA++   G  P 
Sbjct:   169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query:   175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
              +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A 
Sbjct:   228 HKYPPMKVLMLTLQNDPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTA- 282

Query:   235 AQVLQ 239
             A++L+
Sbjct:   283 AELLR 287

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0007243 "intracellular protein kinase cascade" evidence=ISS

MGI|MGI:1917378 Oxsr1 "oxidative-stress responsive 1" [Mus musculus (taxid:10090)]

 Score = 185 (70.2 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 64/245 (26%), Positives = 103/245 (42%)

Query:    13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
             +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct:    59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108

Query:    73 MSNRHRYGITVD-CLAIAHKETLKGLSYLQGEGLFHKNISAGHILH-------------N 118
                 H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL              +
Sbjct:   109 AKGEHKSGVLDEPTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168

Query:   119 IF----NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
              F     D TRN              PEV+     Y   K+DIW  GITA++   G  P 
Sbjct:   169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227

Query:   175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
              +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A 
Sbjct:   228 HKYPPMKVLMLTLQNDPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTA- 282

Query:   235 AQVLQ 239
             A++L+
Sbjct:   283 AELLR 287

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO

GO:0006979 "response to oxidative stress" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1310466 Oxsr1 "oxidative-stress responsive 1" [Rattus norvegicus (taxid:10116)]

 Score = 183 (69.5 bits), Expect = 2.0e-13, P = 2.0e-13
 Identities = 64/244 (26%), Positives = 102/244 (41%)

Query:    14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
             L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++ 
Sbjct:     3 LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IVA 52

Query:    74 SNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILH-------------NI 119
                H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL              + 
Sbjct:    53 KGEHKGGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA 112

Query:   120 F----NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVS 175
             F     D TRN              PEV+     Y   K+DIW  GITA++   G  P  
Sbjct:   113 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYH 171

Query:   176 RRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA 235
             +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A A
Sbjct:   172 KYPPMKVLMLTLQNDPPSLDTGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTA-A 226

Query:   236 QVLQ 239
             ++L+
Sbjct:   227 ELLR 230

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA;ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0006979 "response to oxidative stress" evidence=ISO

GO:0007243 "intracellular protein kinase cascade" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	245
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-24
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-23
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	1e-18
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-18
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-18
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-17
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-17
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-15
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-13
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-13
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-13
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-12
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-11
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	3e-11
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-11
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-11
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-10
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	4e-10
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	6e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	8e-10
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	8e-10
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-09
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	1e-09
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	3e-09
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-09
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	7e-09
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	7e-09
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-08
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	7e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-08
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-07
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-07
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	6e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	6e-07
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-06
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-06
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-06
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-06
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	5e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	7e-06
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-05
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-05
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-05
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-05
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	7e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	8e-05
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	8e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-04
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.001
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	0.001
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	0.001
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	0.001
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.002
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	0.002
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.002
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.003
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.003
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	0.003
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	0.004
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	0.004

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 95.7 bits (239), Expect = 7e-24
 Identities = 69/253 (27%), Positives = 102/253 (40%), Gaps = 52/253 (20%)

Query: 4   INHQ-AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIM--TY 60
           I  +  E+  K+  EI   K   HPNI+  Y + + + +L+     C  GSL  ++  T 
Sbjct: 33  IKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN 92

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
           + L                      +A   KE LKGL YL   G+ H++I A +IL    
Sbjct: 93  QTLTE------------------SQIAYVCKELLKGLEYLHSNGIIHRDIKAANIL---L 131

Query: 121 NDDTR---------NWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQ 166
             D             +S + +  T        APEV+N     Y  K+DIW +GITA++
Sbjct: 132 TSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVIN--GKPYDYKADIWSLGITAIE 189

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
              G  P S   +L  M  +        +    P           S  F + +K CL  +
Sbjct: 190 LAEGKPPYS---ELPPMKALFK-----IATNGPPGLRNPE---KWSDEFKDFLKKCLQKN 238

Query: 227 PAKRPAAEAQVLQ 239
           P KRP AE Q+L+
Sbjct: 239 PEKRPTAE-QLLK 250

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 95.5 bits (238), Expect = 1e-23
 Identities = 67/251 (26%), Positives = 103/251 (41%), Gaps = 41/251 (16%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            ID+        +L +E+      +HPN++  Y + +   +L+        GSL  IM  
Sbjct: 33  RIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKS 92

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL---- 116
                              G+    +A   KE LKGL YL   G  H++I AG+IL    
Sbjct: 93  SYPRG--------------GLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGED 138

Query: 117 -----------HNIFNDDTRNWISSSSSITT--WAAAPEVVNFGDDYYSCKSDIWLIGIT 163
                       ++ +   R      + + T  W  APEV+      Y  K+DIW  GIT
Sbjct: 139 GSVKIADFGVSASLADGGDRTRKVRKTFVGTPCW-MAPEVME-QVHGYDFKADIWSFGIT 196

Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL 223
           A++   G  P S+   + ++   L   P        P+ +T    +  SK+F  M+ +CL
Sbjct: 197 AIELATGAAPYSKYPPMKVLMLTLQNDP--------PSLETGADYKKYSKSFRKMISLCL 248

Query: 224 APDPAKRPAAE 234
             DP+KRP AE
Sbjct: 249 QKDPSKRPTAE 259

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 82.8 bits (205), Expect = 1e-18
 Identities = 68/271 (25%), Positives = 101/271 (37%), Gaps = 68/271 (25%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAA 68
           E+   L +EI   + L HPNI+P   + I   +L+        GS               
Sbjct: 41  EDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS--------------C 86

Query: 69  TQLIMSNRHRYGITVDCLAIAH--KETLKGLSYLQGEGLFHKNISAGHIL---------- 116
             L+       G+    LAIA   K+ L  L Y+  +G  H+++ A HIL          
Sbjct: 87  EDLL-KTHFPEGLPE--LAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLS 143

Query: 117 -----HNIFNDDTRNWI-----SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ 166
                 ++     R  +      SS     W + PEV+      Y+ KSDI+ +GITA +
Sbjct: 144 GLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLS-PEVLQQNLQGYNEKSDIYSVGITACE 202

Query: 167 FPCGGLPVSRRQDLDIMTKML---------------------MKQPKSTSLQVAPNEDTT 205
              G +P          T+ML                         +S S    PN   +
Sbjct: 203 LANGHVPFKDMPA----TQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDS 258

Query: 206 H---GTRTLSKNFWNMVKICLAPDPAKRPAA 233
                TRT S++F   V++CL  DP  RP+A
Sbjct: 259 VDHPYTRTFSEHFHQFVELCLQRDPESRPSA 289

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 81.5 bits (202), Expect = 2e-18
 Identities = 60/250 (24%), Positives = 95/250 (38%), Gaps = 58/250 (23%)

Query: 15  AREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI------GSLDSIMTYRPLNSPAA 68
            REI   + LSHPNI+ +      +  L       ++      G L   ++     S   
Sbjct: 46  RREIRILRRLSHPNIVRLIDAFEDKDHL------YLVMEYCEGGDLFDYLSRGGPLSEDE 99

Query: 69  TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT---- 124
            + I                   + L+GL YL   G+ H+++       NI  D+     
Sbjct: 100 AKKIA-----------------LQILRGLEYLHSNGIIHRDLK----PENILLDENGVVK 138

Query: 125 -------RNWISSSSSITT-----WAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
                  +  + SSSS+TT     W  APEV+  G+ Y   K D+W +G+   +   G  
Sbjct: 139 IADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGP-KVDVWSLGVILYELLTGKP 197

Query: 173 PVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
           P S    LD +  +                       + S+   +++K CL  DP+KRP 
Sbjct: 198 PFSGENILDQLQLIRRILGPPLEFDEPK-------WSSGSEEAKDLIKKCLNKDPSKRPT 250

Query: 233 AEAQVLQEMW 242
           AE ++LQ  W
Sbjct: 251 AE-EILQHPW 259

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 79.9 bits (198), Expect = 6e-18
 Identities = 56/257 (21%), Positives = 91/257 (35%), Gaps = 55/257 (21%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDS 56
           VI      ++  ++ REI   K L HPNI+ +Y     + +L+    Y    C  G L  
Sbjct: 31  VIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEY----CEGGDLFD 86

Query: 57  IMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHK-----NI- 110
           ++  R   S    +  +                 ++ L  L YL  +G+ H+     NI 
Sbjct: 87  LLKKRGRLSEDEARFYL-----------------RQILSALEYLHSKGIVHRDLKPENIL 129

Query: 111 --SAGHI------LHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGI 162
               GH+      L    +   +    ++   T    APEV+      Y    DIW +G+
Sbjct: 130 LDEDGHVKLADFGLARQLDPGEK---LTTFVGTPEYMAPEVLL--GKGYGKAVDIWSLGV 184

Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
              +   G  P      L  + K + K          P          +S    ++++  
Sbjct: 185 ILYELLTGKPPFPGDDQLLELFKKIGK----------PKPPFPPPEWDISPEAKDLIRKL 234

Query: 223 LAPDPAKRPAAEAQVLQ 239
           L  DP KR  AE + LQ
Sbjct: 235 LVKDPEKRLTAE-EALQ 250

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 78.5 bits (194), Expect = 2e-17
 Identities = 67/250 (26%), Positives = 98/250 (39%), Gaps = 58/250 (23%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIM--TYRPLNSP 66
           +++  + +EI   K   HPNI+  + + + + +L+     C  GSL  I   T  PL+  
Sbjct: 42  DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSE- 100

Query: 67  AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDD--- 123
                              +A   +ETLKGL+YL   G  H++I   +IL     +D   
Sbjct: 101 -----------------LQIAYVCRETLKGLAYLHETGKIHRDIKGANIL---LTEDGDV 140

Query: 124 -----------TRNWISSSSSITT--WAAAPEV--VNFGDDYYSCKSDIWLIGITALQFP 168
                      T       S I T  W  APEV  V     Y   K DIW +GITA++  
Sbjct: 141 KLADFGVSAQLTATIAKRKSFIGTPYW-MAPEVAAVERKGGYDG-KCDIWALGITAIELA 198

Query: 169 CGGLPVSR---RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP 225
               P+      + L +++K     PK   L+              S  F + +K CL  
Sbjct: 199 ELQPPMFDLHPMRALFLISKSNFPPPK---LKDKEK---------WSPVFHDFIKKCLTK 246

Query: 226 DPAKRPAAEA 235
           DP KRP A  
Sbjct: 247 DPKKRPTATK 256

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 78.6 bits (194), Expect = 2e-17
 Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 50/260 (19%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIM-- 58
           +I I  + EE      EI       HPNI+ +Y+    + +L+     C  G+LDSIM  
Sbjct: 37  IIQIESE-EELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLE 95

Query: 59  TYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
             R L  P              I   C     ++ L+ L++L    + H+++ AG+IL  
Sbjct: 96  LERGLTEPQ-------------IRYVC-----RQMLEALNFLHSHKVIHRDLKAGNILLT 137

Query: 119 IFND-----------DTRNWISSSSSITT--WAAAPEVV---NFGDDYYSCKSDIWLIGI 162
           +  D           +        + I T  W  APEVV    F D+ Y  K+DIW +GI
Sbjct: 138 LDGDVKLADFGVSAKNKSTLQKRDTFIGTPYW-MAPEVVACETFKDNPYDYKADIWSLGI 196

Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
           T ++      P     +L+ M ++L+K  KS      P  D        S +F + +K C
Sbjct: 197 TLIELAQMEPPHH---ELNPM-RVLLKILKSEP----PTLDQPSK---WSSSFNDFLKSC 245

Query: 223 LAPDPAKRPAAEAQVLQEMW 242
           L  DP  RP A A++L+  +
Sbjct: 246 LVKDPDDRPTA-AELLKHPF 264

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 73.4 bits (181), Expect = 2e-15
 Identities = 67/247 (27%), Positives = 102/247 (41%), Gaps = 46/247 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           VID+    +E   + +EI        P I   Y + +   +L+     C  GS   ++  
Sbjct: 33  VIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKP 92

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
             L+                      A   +E L GL YL  EG  H++I A +IL +  
Sbjct: 93  GKLDETYI------------------AFILREVLLGLEYLHEEGKIHRDIKAANILLSEE 134

Query: 121 ND----D-------TRNWISSSSSITT--WAAAPEVVNFGDDYYSCKSDIWLIGITALQF 167
            D    D       T      ++ + T  W A PEV+      Y  K+DIW +GITA++ 
Sbjct: 135 GDVKLADFGVSGQLTSTMSKRNTFVGTPFWMA-PEVIKQSG--YDEKADIWSLGITAIEL 191

Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
             G  P+S   DL  M ++L   PK+    +  N+         SK F + V +CL  DP
Sbjct: 192 AKGEPPLS---DLHPM-RVLFLIPKNNPPSLEGNK--------FSKPFKDFVSLCLNKDP 239

Query: 228 AKRPAAE 234
            +RP+A+
Sbjct: 240 KERPSAK 246

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 59/255 (23%), Positives = 94/255 (36%), Gaps = 63/255 (24%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI------GSLDSIM-TYR 61
           EE   L REI     L HPNI+  Y +   + +        +       GSL S++  + 
Sbjct: 41  EELEALEREIRILSSLQHPNIVRYYGSERDEEKNTL----NIFLEYVSGGSLSSLLKKFG 96

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN 121
            L  P   +                    ++ L+GL+YL   G+ H++I   +IL  + +
Sbjct: 97  KLPEPVIRKYT------------------RQILEGLAYLHSNGIVHRDIKGANIL--VDS 136

Query: 122 D--------------DTRNWISSSSSI--TTWAAAPEVVNFGDDYYSCKSDIWLIGITAL 165
           D                      + S+  T +  APEV+    + Y   +DIW +G T +
Sbjct: 137 DGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR--GEEYGRAADIWSLGCTVI 194

Query: 166 QFPCGGLPVSRRQDL-DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA 224
           +   G  P S   +    + K+      S      P   +      L K        CL 
Sbjct: 195 EMATGKPPWSELGNPMAALYKIGS----SGEPPEIPEHLSEEAKDFLRK--------CLR 242

Query: 225 PDPAKRPAAEAQVLQ 239
            DP KRP A+ ++LQ
Sbjct: 243 RDPKKRPTAD-ELLQ 256

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 66.5 bits (163), Expect = 3e-13
 Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 51/211 (24%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDS 56
           +I     +    +L REI   K L+HPNI+ +Y     +  L+    Y E     GSL  
Sbjct: 25  IIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCE----GGSLKD 80

Query: 57  IMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
           ++            L +                  + L+GL YL   G+ H+++   +IL
Sbjct: 81  LLKENEGKLSEDEILRIL----------------LQILEGLEYLHSNGIIHRDLKPENIL 124

Query: 117 HNIFNDDTR---------------NWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIG 161
             + +D+ +                 +  +   T    APE V  G  YYS KSDIW +G
Sbjct: 125 --LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPE-VLLGKGYYSEKSDIWSLG 181

Query: 162 ITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
           +   + P            D++ KML K P+
Sbjct: 182 VILYELPEL---------KDLIRKMLQKDPE 203

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 66.6 bits (162), Expect = 4e-13
 Identities = 66/245 (26%), Positives = 102/245 (41%), Gaps = 47/245 (19%)

Query: 7   QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSP 66
             ++++ + +EI+  K   H NI+  + + +S+ +L+     C  GSL  I         
Sbjct: 46  PGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIY-------- 97

Query: 67  AATQLIMSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR 125
                     H  G   +  +A   +ETL+GL+YL  +G  H++I   +IL     D   
Sbjct: 98  ----------HVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKL 147

Query: 126 NWISSSSSITTWAA------------APEVV----NFGDDYYSCKSDIWLIGITALQFPC 169
                ++ IT   A            APEV     N G   Y+   DIW +GITA++   
Sbjct: 148 ADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGG---YNQLCDIWAVGITAIELAE 204

Query: 170 GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK 229
              P+    DL  M  + +     ++ Q    +D T      S  F N VKI L  +P K
Sbjct: 205 LQPPMF---DLHPMRALFLMS--KSNFQPPKLKDKT----KWSSTFHNFVKISLTKNPKK 255

Query: 230 RPAAE 234
           RP AE
Sbjct: 256 RPTAE 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 64.8 bits (156), Expect = 4e-12
 Identities = 53/261 (20%), Positives = 97/261 (37%), Gaps = 36/261 (13%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLSHP-NIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
             +  +++E  +  REI     L+HP NI+ +Y     +  L+        GSL+ ++  
Sbjct: 32  KKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKK 91

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNIS--------- 111
                P      +S      I          + L  L YL  +G+ H++I          
Sbjct: 92  IGRKGP------LSESEALFIL--------AQILSALEYLHSKGIIHRDIKPENILLDRD 137

Query: 112 ----------AGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFG-DDYYSCKSDIWLI 160
                        +L +  +  +   + S+S  T    APEV+      Y S  SDIW +
Sbjct: 138 GRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSL 197

Query: 161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK 220
           GIT  +   G  P    ++    ++ L K           +  +      +SK   +++K
Sbjct: 198 GITLYELLTGLPPFEGEKNSSATSQTL-KIILELPTPSLASPLSPSNPELISKAASDLLK 256

Query: 221 ICLAPDPAKRPAAEAQVLQEM 241
             LA DP  R ++ + +  ++
Sbjct: 257 KLLAKDPKNRLSSSSDLSHDL 277

Length = 384

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 46/249 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSH---PNIIPIYKTMISQRQLFYAEIACMIGSLDSI 57
           +I+++   ++ + + RE+     L     PNI   Y + +   +L+        GS+ ++
Sbjct: 33  IINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTL 92

Query: 58  MTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL- 116
           M   P+                      +++  +E L  L Y+   G+ H++I A +IL 
Sbjct: 93  MKAGPIAEK------------------YISVIIREVLVALKYIHKVGVIHRDIKAANILV 134

Query: 117 ---HNIFNDD---TRNWISSSSSITTWAA-----APEVVNFGDDYYSCKSDIWLIGITAL 165
               N+   D         +SS  +T+       APEV+  G  YY  K+DIW +GIT  
Sbjct: 135 TNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGK-YYDTKADIWSLGITIY 193

Query: 166 QFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP 225
           +   G  P S       M  +   +P        P  +    ++ L + F   V  CL  
Sbjct: 194 EMATGNPPYSDVDAFRAMMLIPKSKP--------PRLEDNGYSKLL-REF---VAACLDE 241

Query: 226 DPAKRPAAE 234
           +P +R +AE
Sbjct: 242 EPKERLSAE 250

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 61.9 bits (150), Expect = 3e-11
 Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 82/293 (27%)

Query: 1   VIDINHQAEEYAK-LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIM- 58
           + D+ +  EE+ K L  E+       HPNI+  +    +   L+        GS +S++ 
Sbjct: 32  ITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLK 91

Query: 59  TYRPLN-SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHI-- 115
           TY P   S A    I+     +G             L+GL+YL   G  H+NI A HI  
Sbjct: 92  TYFPEGMSEALIGNIL-----FG------------ALRGLNYLHQNGYIHRNIKASHILI 134

Query: 116 -------------LHNIFNDDTR-----NWISSSSSITTWAAAPEVVNFGDDYYSCKSDI 157
                        L+++  +  +     ++   S+S+  W  +PE++      Y+ KSDI
Sbjct: 135 SGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPW-LSPELLRQDLYGYNVKSDI 193

Query: 158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK------------------------- 192
           + +GITA +   G +P    QD+ + T+ML+++ K                         
Sbjct: 194 YSVGITACELATGRVPF---QDM-LRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSG 249

Query: 193 -----STSLQVAPNEDT-------THGTRTLSKNFWNMVKICLAPDPAKRPAA 233
                  S+  A    T       T  ++T S  F N+V++CL  DP KRP+A
Sbjct: 250 VDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSA 302

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 72/252 (28%), Positives = 102/252 (40%), Gaps = 60/252 (23%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIM--TYRPLNSP 66
           E+  ++ +EI   K    P I+  Y +      L+     C  GS+  IM  T + L   
Sbjct: 40  EDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTE- 98

Query: 67  AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-------- 118
              + I              A    +TLKGL YL      H++I AG+IL N        
Sbjct: 99  ---EEI--------------AAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLA 141

Query: 119 ------IFNDDTRNWISSSSSITT--WAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
                    D        ++ I T  W A PEV+      Y+ K+DIW +GITA++   G
Sbjct: 142 DFGVSGQLTDTMA---KRNTVIGTPFWMA-PEVIQEIG--YNNKADIWSLGITAIEMAEG 195

Query: 171 GLPVSRRQDLDIMTKMLM---KQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
             P S   D+  M  + M   K P + S    P +         S  F + VK CL  DP
Sbjct: 196 KPPYS---DIHPMRAIFMIPNKPPPTLS---DPEK--------WSPEFNDFVKKCLVKDP 241

Query: 228 AKRPAAEAQVLQ 239
            +RP+A  Q+LQ
Sbjct: 242 EERPSAI-QLLQ 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 60.5 bits (147), Expect = 5e-11
 Identities = 59/258 (22%), Positives = 99/258 (38%), Gaps = 57/258 (22%)

Query: 1   VIDINHQAEEYAK-LAREIYRYKHLSHPNIIPIYKTMISQRQLF-YAEIACMIGSLDSIM 58
           + D     +E  K L +EI     L HPNI+    T   +  L+ + E+    GSL  ++
Sbjct: 35  LADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPG-GSLAKLL 93

Query: 59  TYRPLNSPAATQLIMSNRHRYGITVDCLAIAH-KETLKGLSYLQGEGLFHKNISAGHIL- 116
                              +YG   + +   + ++ L GL YL      H++I   +IL 
Sbjct: 94  ------------------KKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV 135

Query: 117 ---------------HNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIG 161
                            +     +++  S      W  APEV+      Y   +DIW +G
Sbjct: 136 DTNGVVKLADFGMAKQVVEFSFAKSFKGSPY----W-MAPEVIA-QQGGYGLAADIWSLG 189

Query: 162 ITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI 221
            T L+   G  P S+ + +  + K+     +S  L   P+         LS    + +  
Sbjct: 190 CTVLEMATGKPPWSQLEGVAAVFKI----GRSKELPPIPD--------HLSDEAKDFILK 237

Query: 222 CLAPDPAKRPAAEAQVLQ 239
           CL  DP+ RP A A++L+
Sbjct: 238 CLQRDPSLRPTA-AELLE 254

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 60.1 bits (145), Expect = 1e-10
 Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 27/161 (16%)

Query: 86  LAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIFNDDTRNWISSSSSI 134
           +A   KE LKGL YL  E   H++I A ++L             +    T   I  ++ +
Sbjct: 103 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV 162

Query: 135 -TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKS 193
            T +  APEV+      Y  K+DIW +GITA++   G  P S   D+  M ++L   PK+
Sbjct: 163 GTPFWMAPEVIQ--QSAYDSKADIWSLGITAIELAKGEPPNS---DMHPM-RVLFLIPKN 216

Query: 194 TSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
                  N  T  G    SK F   +  CL  DP+ RP A+
Sbjct: 217 -------NPPTLTG--EFSKPFKEFIDACLNKDPSFRPTAK 248

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 60.1 bits (145), Expect = 1e-10
 Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 41/247 (16%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR-PLNSPA 67
           E++  + +E+   + + HPN I      + +   +     C+  + D +  ++ PL    
Sbjct: 67  EKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE-- 124

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------IFN 121
                          V+  AI H   L+GL+YL    + H++I AG+IL        + +
Sbjct: 125 ---------------VEIAAITHG-ALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLAD 168

Query: 122 DDTRNWISSSSSI--TTWAAAPEVVNFGDD-YYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
             + +  S ++S   T +  APEV+   D+  Y  K D+W +GIT ++         R+ 
Sbjct: 169 FGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKP 222

Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL 238
            L  M  M      S    +A NE  T  +   S  F N V  CL   P  RP +E ++L
Sbjct: 223 PLFNMNAM------SALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSE-ELL 275

Query: 239 QEMWHFR 245
           + M+  R
Sbjct: 276 KHMFVLR 282

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 58/255 (22%), Positives = 98/255 (38%), Gaps = 63/255 (24%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIM-TYRPL 63
           E    + +EI   K+L HPNI+    ++ +   L+    YAE     GSL  I+  + P 
Sbjct: 41  EALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAEN----GSLRQIIKKFGPF 96

Query: 64  NSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN----- 118
                   +                   + L+GL+YL  +G+ H++I A +IL       
Sbjct: 97  PESLVAVYV------------------YQVLQGLAYLHEQGVIHRDIKAANILTTKDGVV 138

Query: 119 ---------IFNDDTRNWISSSSSITT--WAAAPEVVNFGDDYYSCKSDIWLIGITALQF 167
                      ND +++    +S + T  W  APEV+       S  SDIW +G T ++ 
Sbjct: 139 KLADFGVATKLNDVSKD---DASVVGTPYW-MAPEVIE--MSGASTASDIWSLGCTVIEL 192

Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
             G  P      +  + +++              +D       +S    + +  C   DP
Sbjct: 193 LTGNPPYYDLNPMAALFRIV-------------QDDHPPLPEGISPELKDFLMQCFQKDP 239

Query: 228 AKRPAAEAQVLQEMW 242
             RP A+ Q+L+  W
Sbjct: 240 NLRPTAK-QLLKHPW 253

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 27/170 (15%)

Query: 77  HRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISS--SSSI 134
           H+  +    +A      L+GL+YL      H++I AG+IL     +     ++   S+S+
Sbjct: 108 HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNIL---LTEPGTVKLADFGSASL 164

Query: 135 ---------TTWAAAPEVVNFGDD-YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMT 184
                    T +  APEV+   D+  Y  K D+W +GIT ++         R+  L  M 
Sbjct: 165 VSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKPPLFNMN 218

Query: 185 KMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
            M      S    +A N+  T  +   S  F N V  CL   P  RP++E
Sbjct: 219 AM------SALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSE 262

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 57.7 bits (139), Expect = 6e-10
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 27/161 (16%)

Query: 86  LAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIFNDDTRNWISSSSSI 134
           +A   +E LKGL YL  E   H++I A ++L             +    T   I  ++ +
Sbjct: 103 IATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV 162

Query: 135 -TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKS 193
            T +  APEV+      Y  K+DIW +GITA++   G  P S   DL  M ++L   PK+
Sbjct: 163 GTPFWMAPEVIK--QSAYDFKADIWSLGITAIELAKGEPPNS---DLHPM-RVLFLIPKN 216

Query: 194 TSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
           +     P  +  +     SK F   V+ CL  DP  RP A+
Sbjct: 217 SP----PTLEGQY-----SKPFKEFVEACLNKDPRFRPTAK 248

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 57.7 bits (139), Expect = 8e-10
 Identities = 57/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR-PLNSPA 67
           E++  + +E+   + L HPN I      + +   +     C+  + D +  ++ PL    
Sbjct: 63  EKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQE-- 120

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------I 119
                          V+  AI H   L+GL+YL    + H++I AG+IL           
Sbjct: 121 ---------------VEIAAITHG-ALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLAD 164

Query: 120 FNDDTRNWISSSSSITTWAAAPEVVNFGDD-YYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
           F   +++  ++S   T +  APEV+   D+  Y  K D+W +GIT ++         R+ 
Sbjct: 165 FGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKP 218

Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
            L  M  M      S    +A N+  T  +   + +F   V  CL   P +RPA+
Sbjct: 219 PLFNMNAM------SALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPAS 267

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 57.4 bits (138), Expect = 8e-10
 Identities = 69/250 (27%), Positives = 101/250 (40%), Gaps = 50/250 (20%)

Query: 8   AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPA 67
            E++A + +EI   K   H NI+  + + + + +L+     C  GSL  I  Y      +
Sbjct: 47  GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDI--YHVTGPLS 104

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL----------- 116
            +Q+               A   +ETL+GL YL  +G  H++I   +IL           
Sbjct: 105 ESQI---------------AYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLAD 149

Query: 117 HNIFNDDTRNWISSSSSI-TTWAAAPEVVNFG-DDYYSCKSDIWLIGITA-----LQFPC 169
             +    T       S I T +  APEV        Y+   DIW +GITA     LQ P 
Sbjct: 150 FGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPM 209

Query: 170 GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK 229
             L   R   L +MTK   + PK                   S +F + VK+ L  +P K
Sbjct: 210 FDLHPMRA--LFLMTKSNFQPPK------------LKDKMKWSNSFHHFVKMALTKNPKK 255

Query: 230 RPAAEAQVLQ 239
           RP AE ++LQ
Sbjct: 256 RPTAE-KLLQ 264

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 72/270 (26%), Positives = 112/270 (41%), Gaps = 61/270 (22%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIY------KTMISQRQLFYAEIACMIGSL 54
           ++DI    EE  K    I R K+ +HPNI   Y          +  QL+     C  GS 
Sbjct: 38  IMDIIEDEEEEIKEEYNILR-KYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGS- 95

Query: 55  DSIMTYRPLNSPAATQLIMSNRHRYG-ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAG 113
                         T L+   R +   +  + +A   +ETL+GL+YL    + H++I   
Sbjct: 96  -------------VTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQ 142

Query: 114 HIL--HNI------FN-----DDT---RNWISSSSSITT--WAAAPEVV---NFGDDYYS 152
           +IL   N       F      D T   RN     + I T  W A PEV+      D  Y 
Sbjct: 143 NILLTKNAEVKLVDFGVSAQLDSTLGRRN-----TFIGTPYWMA-PEVIACDEQPDASYD 196

Query: 153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLS 212
            +SD+W +GITA++   G  P+    D+  M + L K P++    +   E+        S
Sbjct: 197 ARSDVWSLGITAIELADGKPPLC---DMHPM-RALFKIPRNPPPTLKSPEN-------WS 245

Query: 213 KNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
           K F + +  CL  +  +RP  E ++L+  +
Sbjct: 246 KKFNDFISECLIKNYEQRPFME-ELLEHPF 274

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 56.9 bits (137), Expect = 1e-09
 Identities = 69/276 (25%), Positives = 107/276 (38%), Gaps = 72/276 (26%)

Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
           L  E++  K  +HPNI+P   T I+  +L+          + S M Y      +A  LI 
Sbjct: 46  LQGELHVSKLFNHPNIVPYRATFIADNELWV---------VTSFMAY-----GSAKDLIC 91

Query: 74  SNRHRYGITVDCLAIAH--KETLKGLSYLQGEGLFHKNISAGHIL--------------- 116
           ++   +   +  LAIA+  +  LK L Y+   G  H+++ A HIL               
Sbjct: 92  TH---FMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSN 148

Query: 117 HNIFNDDTR-----NWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGG 171
            ++ N   R     ++   S  +  W + PEV+      Y  KSDI+ +GITA +   G 
Sbjct: 149 LSMINHGQRLRVVHDFPKYSVKVLPWLS-PEVLQQNLQGYDAKSDIYSVGITACELANGH 207

Query: 172 LPVSRRQD---------------LDIMT---KMLMKQPKSTSLQVAPNEDTTHGT----- 208
           +P                     LD  T   + L  +P  +       E TT  T     
Sbjct: 208 VPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSN 267

Query: 209 ---------RTLSKNFWNMVKICLAPDPAKRPAAEA 235
                    RT S +F + V+ CL  +P  RP+A  
Sbjct: 268 GESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSAST 303

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 55.5 bits (133), Expect = 3e-09
 Identities = 62/246 (25%), Positives = 98/246 (39%), Gaps = 45/246 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           +ID+    +E   + +EI        P +   Y + +   +L+        GS   ++  
Sbjct: 36  IIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP 95

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL---- 116
            PL+    TQ+               A   +E LKGL YL  E   H++I A ++L    
Sbjct: 96  GPLDE---TQI---------------ATILREILKGLDYLHSEKKIHRDIKAANVLLSEH 137

Query: 117 -------HNIFNDDTRNWISSSSSI-TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFP 168
                    +    T   I  ++ + T +  APEV+      Y  K+DIW +GITA++  
Sbjct: 138 GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELA 195

Query: 169 CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA 228
            G  P S    +    K+L   PK+       N  T  G    SK     V+ CL  +P+
Sbjct: 196 KGEPPHSELHPM----KVLFLIPKN-------NPPTLEG--NYSKPLKEFVEACLNKEPS 242

Query: 229 KRPAAE 234
            RP A+
Sbjct: 243 FRPTAK 248

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 55.4 bits (133), Expect = 4e-09
 Identities = 66/256 (25%), Positives = 103/256 (40%), Gaps = 48/256 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           VID   + EE      EI       HPNI+ +      +  L+     C  G++D++M  
Sbjct: 37  VIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 95

Query: 61  --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
             RPL  P              I V C     K+TL+ L+YL    + H+++ AG+IL  
Sbjct: 96  LERPLTEPQ-------------IRVVC-----KQTLEALNYLHENKIIHRDLKAGNILFT 137

Query: 119 IFND-----------DTRNWISSSSSI-TTWAAAPEVV---NFGDDYYSCKSDIWLIGIT 163
           +  D           +TR      S I T +  APEVV      D  Y  K+D+W +GIT
Sbjct: 138 LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 197

Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL 223
            ++      P      + ++ K+   +P + +    P+          S  F + +K CL
Sbjct: 198 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLA---QPSR--------WSSEFKDFLKKCL 246

Query: 224 APDPAKRPAAEAQVLQ 239
             +   R     Q+LQ
Sbjct: 247 EKNVDARWTT-TQLLQ 261

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 54.7 bits (131), Expect = 7e-09
 Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 40/236 (16%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR-PLNSPA 67
           E++  + +E+   + L HPN I      + +   +     C+  + D +  ++ PL    
Sbjct: 57  EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE-- 114

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------IFN 121
                          V+  A+ H   L+GL+YL    + H+++ AG+IL +      + +
Sbjct: 115 ---------------VEIAAVTHG-ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGD 158

Query: 122 DDTRNWISSSSSI--TTWAAAPEVVNFGDD-YYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
             + + ++ ++    T +  APEV+   D+  Y  K D+W +GIT ++         R+ 
Sbjct: 159 FGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKP 212

Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
            L  M  M      S    +A NE     +   S+ F N V  CL   P  RP +E
Sbjct: 213 PLFNMNAM------SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 262

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 54.4 bits (131), Expect = 7e-09
 Identities = 56/249 (22%), Positives = 94/249 (37%), Gaps = 63/249 (25%)

Query: 12  AKLAREIYRYKHLSHPNIIPI--YKTMISQRQLFYAEIACMIGSLDSIM-TYRPLNSPAA 68
             L  EI   K L H NI+    ++T      +F   +    GS+ S + TY        
Sbjct: 53  KALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPG--GSIGSCLRTYGRFEEQLV 110

Query: 69  TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL------------ 116
                                 ++ L+GL+YL  +G+ H+++ A ++L            
Sbjct: 111 RFFT------------------EQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDF 152

Query: 117 ------HNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
                  +I+++D    +  S     W A PEV++     YS K DIW +G   L+   G
Sbjct: 153 GISKKSDDIYDNDQNMSMQGS---VFWMA-PEVIHSYSQGYSAKVDIWSLGCVVLEMFAG 208

Query: 171 GLPVSRRQDLDIMTKMLMKQ-----PKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP 225
             P S  + +  M K+  K+     P   S+ ++P          ++ +F N    C   
Sbjct: 209 RRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSP----------VALDFLNA---CFTI 255

Query: 226 DPAKRPAAE 234
           +P  RP A 
Sbjct: 256 NPDNRPTAR 264

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 55/249 (22%), Positives = 95/249 (38%), Gaps = 47/249 (18%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQR--QLFYAEIACMIGSLDSIMTYR--PLN 64
                L  EI  + +L H NI+    +       ++F  ++    GSL +++  +  PL 
Sbjct: 47  RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPG--GSLSALLRSKWGPLK 104

Query: 65  SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----- 119
               T                +    K+ L+GL YL    + H++I   ++L N      
Sbjct: 105 DNEQT----------------IIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVV 148

Query: 120 ----FNDDTR----NWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGG 171
               F    R    N  + + + T    APEV++ G   Y   +DIW +G T ++   G 
Sbjct: 149 KISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGK 208

Query: 172 LPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
            P              + +P++   +V   +       +LS    N +  C  PDP KR 
Sbjct: 209 PPFIE-----------LGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRA 257

Query: 232 AAEAQVLQE 240
           +A   +LQ+
Sbjct: 258 SA-HDLLQD 265

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 49/236 (20%), Positives = 86/236 (36%), Gaps = 67/236 (28%)

Query: 22  KHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRH 77
             LSHPN++ +Y     QR +F    Y    C++  L      R       T+ ++    
Sbjct: 54  MKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYL------RERKGKLGTEWLLDM-- 105

Query: 78  RYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN--------------DD 123
                  C  +      + + YL+  G  H++++A + L    N              DD
Sbjct: 106 -------CSDVC-----EAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD 153

Query: 124 TRNWISSSSSI--TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDL 180
              + SS  +     W A PEV ++    +S KSD+W  G+   + F  G +P  R  + 
Sbjct: 154 --QYTSSQGTKFPVKW-APPEVFDYSR--FSSKSDVWSFGVLMWEVFSEGKMPYERFSNS 208

Query: 181 DIMTKMLM----KQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
           +++  +       +PK    +V                 + ++  C    P  RPA
Sbjct: 209 EVVESVSAGYRLYRPKLAPTEV-----------------YTIMYSCWHEKPEDRPA 247

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 58/262 (22%), Positives = 92/262 (35%), Gaps = 56/262 (21%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACM-IGSLDSIMT 59
            I ++   E   +L RE+   +    P ++  Y     + ++    +  M  GSL  ++ 
Sbjct: 33  KIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIV-LEYMDGGSLADLLK 91

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYL-QGEGLFHKNISAGHILHN 118
                                I    LA   ++ LKGL YL     + H++I   ++L N
Sbjct: 92  KVG-----------------KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN 134

Query: 119 I--------FNDDTRNWISSSSSIT-----TW---AA--APEVVNFGDDYYSCKSDIWLI 160
                    F       IS     T     T+       +PE      + YS  +DIW +
Sbjct: 135 SKGEVKIADFG------ISKVLENTLDQCNTFVGTVTYMSPE--RIQGESYSYAADIWSL 186

Query: 161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK 220
           G+T L+   G  P             LM+          P E         S  F + + 
Sbjct: 187 GLTLLECALGKFPFLPPGQPSFFE--LMQAICDGPPPSLPAE-------EFSPEFRDFIS 237

Query: 221 ICLAPDPAKRPAAEAQVLQEMW 242
            CL  DP KRP+A A++LQ  +
Sbjct: 238 ACLQKDPKKRPSA-AELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 51.5 bits (123), Expect = 7e-08
 Identities = 58/255 (22%), Positives = 101/255 (39%), Gaps = 49/255 (19%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR------QLFYAEIACMIGSL 54
           V+D+    EE  KL   + + K+  H NI   Y   I +       QL+     C  GS+
Sbjct: 48  VMDVTEDEEEEIKLEINMLK-KYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSV 106

Query: 55  DSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGH 114
             ++     N+               +  D +A   +E L+GL++L    + H++I   +
Sbjct: 107 TDLVKNTKGNA---------------LKEDWIAYICREILRGLAHLHAHKVIHRDIKGQN 151

Query: 115 IL-----------HNIFNDDTRNWISSSSSI-TTWAAAPEVV---NFGDDYYSCKSDIWL 159
           +L             +     R     ++ I T +  APEV+      D  Y  +SDIW 
Sbjct: 152 VLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWS 211

Query: 160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMV 219
           +GITA++   G  P+    D+  M  + +         +  N      ++  SK F + +
Sbjct: 212 LGITAIEMAEGAPPLC---DMHPMRALFL---------IPRNPPPKLKSKKWSKKFIDFI 259

Query: 220 KICLAPDPAKRPAAE 234
           + CL  +   RP+ E
Sbjct: 260 EGCLVKNYLSRPSTE 274

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 51.4 bits (124), Expect = 8e-08
 Identities = 58/274 (21%), Positives = 93/274 (33%), Gaps = 99/274 (36%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDS 56
            + +  Q +E   +  EI   K   HPNI+  Y + +   +L+    Y +     GSL  
Sbjct: 51  KMRLRKQNKE--LIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG----GSLTD 104

Query: 57  IMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH--KETLKGLSYLQGEGLFHKNISAGH 114
           I+T           + M+             IA+  +E L+GL YL  + + H++I + +
Sbjct: 105 IITQ--------NFVRMNEPQ----------IAYVCREVLQGLEYLHSQNVIHRDIKSDN 146

Query: 115 ILHNIFNDDTRNWISSSSSI-----------------------TTWAAAPEVVNFGDDYY 151
           IL           +S   S+                       T +  APEV+      Y
Sbjct: 147 IL-----------LSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVI--KRKDY 193

Query: 152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQP-----------KSTSLQVAP 200
             K DIW +GI  ++                   M   +P              + +  P
Sbjct: 194 GPKVDIWSLGIMCIE-------------------MAEGEPPYLREPPLRALFLITTKGIP 234

Query: 201 NEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
                      S  F + +  CL  DP KRP+AE
Sbjct: 235 PLKNPEK---WSPEFKDFLNKCLVKDPEKRPSAE 265

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 51.0 bits (122), Expect = 1e-07
 Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 42/177 (23%)

Query: 86  LAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------IFND--DTRNWIS 129
           LA   ++ L G++YL    + H++I   ++L N              I     D  N   
Sbjct: 170 LADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCN--- 226

Query: 130 SSSSITTWA-AAPEVVN--FGDDYYS-CKSDIWLIGITALQFPCGGLP--VSRRQD-LDI 182
             SS+ T A  +PE +N       Y     DIW +G++ L+F  G  P  V R+ D   +
Sbjct: 227 --SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASL 284

Query: 183 MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
           M  + M QP       AP         T S+ F + +  CL  +PAKR +A  Q+LQ
Sbjct: 285 MCAICMSQPPE-----AP--------ATASREFRHFISCCLQREPAKRWSA-MQLLQ 327

Length = 353

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 50.6 bits (122), Expect = 2e-07
 Identities = 41/257 (15%), Positives = 80/257 (31%), Gaps = 68/257 (26%)

Query: 5   NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI------GSLDSIM 58
           +   EE     +E    K L HPN++ +      +  L       ++      G L   +
Sbjct: 34  DASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPL------YLVLEYMEGGDLLDYL 87

Query: 59  TYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
                  P+  +  +S +      +    IA     KG+ YL  +   H++++A     N
Sbjct: 88  RKSRPVFPSPEKSTLSLKDLLSFAIQ---IA-----KGMEYLASKKFVHRDLAA----RN 135

Query: 119 IFNDDTRN----------WISSSSSITT---------WAAAPEVVNFGDDYYSCKSDIWL 159
               +              +                 W  APE +  G   ++ KSD+W 
Sbjct: 136 CLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRW-MAPESLKDGI--FTSKSDVWS 192

Query: 160 IGITALQ-FPCGGLPVSRRQDLDIMTKML----MKQPKSTSLQVAPNEDTTHGTRTLSKN 214
            G+   + F  G  P     + +++  +     + +P+                      
Sbjct: 193 FGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYC-----------------PDE 235

Query: 215 FWNMVKICLAPDPAKRP 231
            + ++  C   DP  RP
Sbjct: 236 LYELMLSCWQLDPEDRP 252

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 49.9 bits (119), Expect = 2e-07
 Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 52/245 (21%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSI-MTYRPLNSPA 67
           +EY KL  E+   K L H NI+    T             C+  +  SI M + P  S  
Sbjct: 44  KEYEKLQEEVDLLKSLKHVNIVQYLGT-------------CLDDNTISIFMEFVPGGS-- 88

Query: 68  ATQLIMSNRHRYGITVDCLAIAH-KETLKGLSYLQGEGLFHKNISAGHIL---HNIFN-- 121
               I S  +R+G   + +   + K+ L G++YL    + H++I   +++   + I    
Sbjct: 89  ----ISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLI 144

Query: 122 -------------DDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFP 168
                          T + +  S   T +  APEV+N  +  Y  KSDIW IG T  +  
Sbjct: 145 DFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVIN--ESGYGRKSDIWSIGCTVFEMA 202

Query: 169 CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA 228
            G  P++    +D +  M         +   P+        + S    + V  CL  D  
Sbjct: 203 TGKPPLA---SMDRLAAMFYIGAHRGLMPRLPD--------SFSAAAIDFVTSCLTRDQH 251

Query: 229 KRPAA 233
           +RP+A
Sbjct: 252 ERPSA 256

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 48.9 bits (116), Expect = 6e-07
 Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 48/256 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           VI+   + EE      EI      +HP I+ +        +L+     C  G++D+IM  
Sbjct: 44  VIETKSE-EELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLE 102

Query: 61  --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
             R L  P              I V C     ++ L+ L YL    + H+++ AG++L  
Sbjct: 103 LDRGLTEPQ-------------IQVIC-----RQMLEALQYLHSMKIIHRDLKAGNVLLT 144

Query: 119 IFND-----------DTRNWISSSSSI-TTWAAAPEVV---NFGDDYYSCKSDIWLIGIT 163
           +  D           + +      S I T +  APEVV      D  Y  K+DIW +GIT
Sbjct: 145 LDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT 204

Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL 223
            ++      P      + ++ K+   +P + S    P++         S  F + +K  L
Sbjct: 205 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLS---QPSK--------WSMEFRDFLKTAL 253

Query: 224 APDPAKRPAAEAQVLQ 239
              P  RP+A AQ+L+
Sbjct: 254 DKHPETRPSA-AQLLE 268

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 48.7 bits (116), Expect = 6e-07
 Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 54/202 (26%)

Query: 24  LSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY 79
           LSHP ++ +Y     Q+ L+    + E  C++  L                     R R 
Sbjct: 56  LSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYL---------------------RQRQ 94

Query: 80  G-ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN---------------IFNDD 123
           G ++ D L    ++  +G+ YL+     H++++A + L +               + +D+
Sbjct: 95  GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154

Query: 124 TRNWISSSSSI--TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDL 180
              + SSS +     W+  PEV NF    YS KSD+W  G+   + F  G +P  ++ + 
Sbjct: 155 ---YTSSSGAKFPVKWSP-PEVFNF--SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY 208

Query: 181 DIMTKML----MKQPKSTSLQV 198
           +++  +     + +PK  S+ V
Sbjct: 209 EVVEMISRGFRLYRPKLASMTV 230

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 52/251 (20%), Positives = 93/251 (37%), Gaps = 46/251 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            I +        ++ RE+      + P I+  Y    +   +         GSLD I+  
Sbjct: 33  TIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKIL-- 90

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGE-GLFHKNISAGHILHNI 119
                            +  I    L       LKGL+YL  +  + H+++   +IL N 
Sbjct: 91  --------------KEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS 136

Query: 120 --------FNDDTR--NWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC 169
                   F    +  N ++ +   T+   APE +   D  YS KSDIW +G++ ++   
Sbjct: 137 RGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGND--YSVKSDIWSLGLSLIELAT 194

Query: 170 GGLPVSRRQD-----LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA 224
           G  P     D      +++  ++ + P        P+          S +F + V +CL 
Sbjct: 195 GRFPYPPENDPPDGIFELLQYIVNEPPP-----RLPSGK-------FSPDFQDFVNLCLI 242

Query: 225 PDPAKRPAAEA 235
            DP +RP+ + 
Sbjct: 243 KDPRERPSYKE 253

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 47.8 bits (113), Expect = 1e-06
 Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 51/256 (19%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSH-PNIIPIYKTMISQR------QLFYAEIACMIGS 53
           V+D+    EE  ++ +EI   K  SH  NI   Y   I +       QL+     C  GS
Sbjct: 38  VMDVTGDEEE--EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGS 95

Query: 54  LDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAG 113
           +  ++     N+               +  + +A   +E L+GLS+L    + H++I   
Sbjct: 96  VTDLIKNTKGNT---------------LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQ 140

Query: 114 HIL-----------HNIFNDDTRNWISSSSSI-TTWAAAPEVVNFG---DDYYSCKSDIW 158
           ++L             +     R     ++ I T +  APEV+      D  Y  KSD+W
Sbjct: 141 NVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLW 200

Query: 159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM 218
            +GITA++   G  P+    D+  M  + +         +  N      ++  SK F + 
Sbjct: 201 SLGITAIEMAEGAPPLC---DMHPMRALFL---------IPRNPAPRLKSKKWSKKFQSF 248

Query: 219 VKICLAPDPAKRPAAE 234
           ++ CL  + ++RP  E
Sbjct: 249 IESCLVKNHSQRPTTE 264

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 47.5 bits (114), Expect = 2e-06
 Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 39/164 (23%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP--LNSPAATQLIM 73
           REI   + L HPNI+ + + + S             GS+  +  Y    L       L+ 
Sbjct: 47  REIKLLQKLRHPNIVRLKEIVTS----------KGKGSIYMVFEYMDHDLTG-----LLD 91

Query: 74  SNRHRYGIT-VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND------D--- 123
           S   ++  + + C     K+ L+GL YL   G+ H++I   +IL N  ND      D   
Sbjct: 92  SPEVKFTESQIKCYM---KQLLEGLQYLHSNGILHRDIKGSNILIN--NDGVLKLADFGL 146

Query: 124 TRNWISSSSS------ITTWAAAPEVVNFGDDYYSCKSDIWLIG 161
            R +   +S+      IT W   PE++  G   Y  + D+W +G
Sbjct: 147 ARPYTKRNSADYTNRVITLWYRPPELL-LGATRYGPEVDMWSVG 189

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 60/258 (23%), Positives = 100/258 (38%), Gaps = 62/258 (24%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI---------GSLDSIMTYRPL 63
           ++ RE+   K    P I+  Y         F  E +  I         GSLDSI  Y+ +
Sbjct: 45  QILRELEINKSCKSPYIVKYYGA-------FLDESSSSIGIAMEYCEGGSLDSI--YKKV 95

Query: 64  NSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---- 119
                           G   + +       LKGLSYL    + H++I   +IL       
Sbjct: 96  KKRGG----RIGEKVLGKIAESV-------LKGLSYLHSRKIIHRDIKPSNILLTRKGQV 144

Query: 120 ------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ-----FP 168
                  + +  N ++ + + T++  APE +      YS  SD+W +G+T L+     FP
Sbjct: 145 KLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKP--YSITSDVWSLGLTLLEVAQNRFP 202

Query: 169 CGGLPVSRRQDL---DIMTKML-MKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA 224
               P      L   ++++ ++ M  P+   L+  P           S+ F + +K CL 
Sbjct: 203 ---FPPEGEPPLGPIELLSYIVNMPNPE---LKDEPGNG-----IKWSEEFKDFIKQCLE 251

Query: 225 PDPAKRPAAEAQVLQEMW 242
            DP +RP     +L+  W
Sbjct: 252 KDPTRRPTPW-DMLEHPW 268

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 60/241 (24%), Positives = 87/241 (36%), Gaps = 56/241 (23%)

Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQRQL-FYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           LAREI   K L H NI+    + +    L  + E             Y P  S AA   +
Sbjct: 53  LAREIALLKELQHENIVQYLGSSLDADHLNIFLE-------------YVPGGSVAA---L 96

Query: 73  MSNRHRYGITVDCLAIAH-KETLKGLSYLQGEGLFHKNISAGHIL--------------- 116
           ++N   YG   + L     ++ LKGL+YL   G+ H++I   +IL               
Sbjct: 97  LNN---YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS 153

Query: 117 ----HNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
                N  +  T     S      W  APEVV      Y+ K+DIW +G   ++   G  
Sbjct: 154 KKLEANSLSTKTNGARPSLQGSVFW-MAPEVVK--QTSYTRKADIWSLGCLVVEMLTGKH 210

Query: 173 PVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
           P      L  + K+        +    P+  ++     L K F          D  KRP 
Sbjct: 211 PFPDCTQLQAIFKI-----GENASPEIPSNISSEAIDFLEKTF--------EIDHNKRPT 257

Query: 233 A 233
           A
Sbjct: 258 A 258

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 46.1 bits (109), Expect = 5e-06
 Identities = 50/256 (19%), Positives = 94/256 (36%), Gaps = 49/256 (19%)

Query: 5   NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLN 64
           N  + E   L  E    K ++HP++I +Y        L         GSL S +      
Sbjct: 41  NASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKV 100

Query: 65  SPAATQLIMSNRHRYGITVDCLAIAHKETL-------KGLSYLQGEGLFHKNISAGHIL- 116
            P+      +    Y    D  A+   + +       +G+ YL    L H++++A ++L 
Sbjct: 101 GPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV 160

Query: 117 --------------HNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGI 162
                          +++ +D+    S       W  A E  +  D  Y+ +SD+W  G+
Sbjct: 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKW-MAIE--SLFDHIYTTQSDVWSFGV 217

Query: 163 TALQF------PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFW 216
              +       P  G+   R  +L + T   M++P++ S ++                 +
Sbjct: 218 LLWEIVTLGGNPYPGIAPERLFNL-LKTGYRMERPENCSEEM-----------------Y 259

Query: 217 NMVKICLAPDPAKRPA 232
           N++  C   +P KRP 
Sbjct: 260 NLMLTCWKQEPDKRPT 275

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 46.4 bits (110), Expect = 5e-06
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 34/154 (22%)

Query: 22  KHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI 81
           ++++HP++I +  T      L    I CM+     +  Y    S   T L   +R    +
Sbjct: 112 QNVNHPSVIRMKDT------LVSGAITCMV-----LPHYS---SDLYTYLTKRSRP---L 154

Query: 82  TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------------FNDDTRNWI 128
            +D   I  K+ L+GL YL  + + H+++   +I  N              F      ++
Sbjct: 155 PIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFL 214

Query: 129 SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGI 162
             + ++ T   APEV+    D Y+ K+DIW  GI
Sbjct: 215 GLAGTVET--NAPEVL--ARDKYNSKADIWSAGI 244

Length = 357

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 55/251 (21%)

Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
           +A E+   + L HPN++  Y   + + +++     C  G+L+ ++               
Sbjct: 46  IADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELL--------------- 90

Query: 74  SNRHRYGITVD--CLAIAHKETLKGLSYLQGEGLFHKNISAGHIL--HN---IFNDDTRN 126
                +G  +D   + +   + L+GL+YL   G+ H++I   +I   HN      D    
Sbjct: 91  ----EHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCA 146

Query: 127 WISSSSSIT------TWAA-----APEVVNFGD-DYYSCKSDIWLIGITALQFPCGGLPV 174
               +++ T      + A      APEV+  G    +   +DIW +G   L+   G  P 
Sbjct: 147 VKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPW 206

Query: 175 SR-RQDLDIMTKMLMKQPKS--TSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
           S    +  IM  +          SLQ++P            K+F   +  CL  DP KRP
Sbjct: 207 SELDNEFQIMFHVGAGHKPPIPDSLQLSP----------EGKDF---LDRCLESDPKKRP 253

Query: 232 AAEAQVLQEMW 242
            A +++LQ  +
Sbjct: 254 TA-SELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 55/250 (22%), Positives = 98/250 (39%), Gaps = 67/250 (26%)

Query: 13  KLAREIYRYKHLSH----PNIIPIYKTMISQRQLFYAEIACM----IGSLDSIMTYRPLN 64
            + ++I R   + H    P I+  Y   +++  +      CM     GSLD I  Y+   
Sbjct: 45  SVRKQILRELQIMHECRSPYIVSFYGAFLNENNI----CMCMEFMDCGSLDRI--YK--- 95

Query: 65  SPAATQLIMSNRHRYG-ITVDCLAIAHKETLKGLSYLQGE-GLFHKNI--------SAGH 114
                        + G I V+ L       ++GL+YL     + H++I        S G 
Sbjct: 96  -------------KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQ 142

Query: 115 ILHNIF--NDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
           I    F  + +  N I+ +   T+   +PE +  G   Y+ KSD+W +GI+ ++   G  
Sbjct: 143 IKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGK--YTVKSDVWSLGISIIELALGKF 200

Query: 173 PVSRRQD-----------LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI 221
           P +               LD++ +++ + P        P+ D         ++  + V  
Sbjct: 201 PFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL-----PSSD-------FPEDLRDFVDA 248

Query: 222 CLAPDPAKRP 231
           CL  DP +RP
Sbjct: 249 CLLKDPTERP 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 62/274 (22%), Positives = 101/274 (36%), Gaps = 65/274 (23%)

Query: 3   DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
           D+     +  ++ REI   + L HP+I+ I   M+   +  + +I  +   ++S +    
Sbjct: 35  DVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLH--- 91

Query: 63  LNSPAATQLIMSNRHRYGITVDCLAIAHK-----ETLKGLSYLQGEGLFHKNISAGHILH 117
                  Q+I +N        D L   H      + L+ L Y+    +FH+++   +IL 
Sbjct: 92  -------QVIKAN--------DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA 136

Query: 118 N---------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGI 162
           N                FND       +    T W  APE+       Y+   DIW IG 
Sbjct: 137 NADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 196

Query: 163 TALQ-------FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDT--------THG 207
              +       FP  G  V  +  LD++T +L   P   ++    NE             
Sbjct: 197 IFAEVLTGKPLFP--GKNVVHQ--LDLITDLLGT-PSPETISRVRNEKARRYLSSMRKKQ 251

Query: 208 TRTLSKNFWN-------MVKICLAPDPAKRPAAE 234
               S+ F N       +++  LA DP  RP AE
Sbjct: 252 PVPFSQKFPNADPLALRLLERLLAFDPKDRPTAE 285

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 53/267 (19%), Positives = 92/267 (34%), Gaps = 69/267 (25%)

Query: 16  REIYRYKHLSHPNIIPIYKTMIS-------QRQLFYAEIACMIGSLDSIMTYRPLN-SPA 67
           REI   K L HPN++P+    +        +R   Y     M   L  ++    +  + +
Sbjct: 56  REIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTES 115

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------- 118
             +  M                  + L+G++YL    + H++I A +IL +         
Sbjct: 116 QIKCYM-----------------LQLLEGINYLHENHILHRDIKAANILIDNQGILKIAD 158

Query: 119 -----IFNDDTRNWISSSSS---------ITTWAAAPEVVNFGDDYYSCKSDIWLIG-IT 163
                 ++    N                +T W   PE++  G+  Y+   DIW IG + 
Sbjct: 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELL-LGERRYTTAVDIWGIGCVF 217

Query: 164 ALQFPCGGLPVSR-RQDLDIMTKM--LMKQPKSTSLQVA-------PNEDTTHGTRTLSK 213
           A  F     P+ + + D+D +  +  L   P   +                T+  RTL +
Sbjct: 218 AEMFT--RRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE 275

Query: 214 NFWNMVKIC-------LAPDPAKRPAA 233
            F  +           L+ DP KR  A
Sbjct: 276 RFGKLGPEGLDLLSKLLSLDPYKRLTA 302

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 49/199 (24%), Positives = 79/199 (39%), Gaps = 41/199 (20%)

Query: 7   QAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQR-----QLFYAEIACMIGSLDSIMTY 60
           Q+E +AK A RE+   KH+ H N+I +     S       Q FY  +  M   L  IM +
Sbjct: 53  QSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGH 112

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
            PL+      L+                   + L GL Y+   G+ H+++  G++     
Sbjct: 113 -PLSEDKVQYLVY------------------QMLCGLKYIHSAGIIHRDLKPGNL---AV 150

Query: 121 NDDTRNWI------------SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFP 168
           N+D    I             +   +T W  APEV+     +Y+   DIW +G    +  
Sbjct: 151 NEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVI-LNWMHYNQTVDIWSVGCIMAEML 209

Query: 169 CGGLPVSRRQDLDIMTKML 187
            G      +  LD +T++L
Sbjct: 210 TGKTLFKGKDYLDQLTQIL 228

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 43/255 (16%), Positives = 84/255 (32%), Gaps = 73/255 (28%)

Query: 5   NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF-YAEIACMIGSLDSIMTYRPL 63
           +   ++  +  RE    + L HPN++ +      +  L+   E     G L S +     
Sbjct: 39  DASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEG-GDLLSYLRKNRP 97

Query: 64  NSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDD 123
               +  L              L IA     +G+ YL+ +   H++++A + L  +  + 
Sbjct: 98  KLSLSDLLSF-----------ALQIA-----RGMEYLESKNFIHRDLAARNCL--VGENL 139

Query: 124 T---------RNWISSSSSITT---------WAAAPEVVNFGDDYYSCKSDIWLIGITAL 165
                     R+                   W  APE +  G   ++ KSD+W  G+  L
Sbjct: 140 VVKISDFGLSRDL--YDDDYYRKRGGKLPIRW-MAPESLKEGK--FTSKSDVWSFGVL-L 193

Query: 166 -------QFPCGGLPVSRRQDL--DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFW 216
                  + P  G+     +++   +     + QP +                      +
Sbjct: 194 WEIFTLGEQPYPGMSN---EEVLEYLKNGYRLPQPPNC-----------------PPELY 233

Query: 217 NMVKICLAPDPAKRP 231
           +++  C A DP  RP
Sbjct: 234 DLMLQCWAEDPEDRP 248

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 64/275 (23%), Positives = 105/275 (38%), Gaps = 79/275 (28%)

Query: 9   EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYR---PL 63
           EE   L RE+   + L  HPNI+ + +      +L++  E   M G+L  +M  R   P 
Sbjct: 40  EECMNL-REVKSLRKLNEHPNIVKLKEVFRENDELYFVFE--YMEGNLYQLMKDRKGKPF 96

Query: 64  NSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDD 123
            S +  + I+                  + L+GL+++   G FH+++   ++L  +   +
Sbjct: 97  -SESVIRSII-----------------YQILQGLAHIHKHGFFHRDLKPENLL--VSGPE 136

Query: 124 T---------RNWISSSSSITT-----WAAAPEVVNFGDDYYSCKSDIWLIG-----ITA 164
                     R  I S    T      W  APE++      YS   DIW +G     +  
Sbjct: 137 VVKIADFGLARE-IRSRPPYTDYVSTRWYRAPEIL-LRSTSYSSPVDIWALGCIMAELYT 194

Query: 165 LQ--FP-----------CG--GLPVSRRQD--LDIMTKMLMKQPKSTSL---QVAPNEDT 204
           L+  FP           C   G P  +       + +K+  + P+       Q+ PN   
Sbjct: 195 LRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNA-- 252

Query: 205 THGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
                  S    +++K  L  DP KRP A +Q LQ
Sbjct: 253 -------SPEAIDLIKDMLRWDPKKRPTA-SQALQ 279

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 62/270 (22%), Positives = 97/270 (35%), Gaps = 62/270 (22%)

Query: 6   HQAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLN 64
            ++E   K A REI   K L+HPNII +   +   +   Y     M   L  ++  R   
Sbjct: 36  FESEGIPKTALREIKLLKELNHPNIIKL-LDVFRHKGDLYLVFEFMDTDLYKLIKDR--Q 92

Query: 65  SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-- 122
                 LI S  +              + L+GL++    G+ H+++   ++L N      
Sbjct: 93  RGLPESLIKSYLY--------------QLLQGLAFCHSHGILHRDLKPENLLINTEGVLK 138

Query: 123 ----------DTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIG-----ITALQ- 166
                      +     +   +T W  APE++  GD  YS   DIW +G     + + + 
Sbjct: 139 LADFGLARSFGSPVRPYTHYVVTRWYRAPELL-LGDKGYSTPVDIWSVGCIFAELLSRRP 197

Query: 167 -FPCGGLPVSRRQDLDIMTKML--------MKQPKSTSLQVAPNEDTTHGTR-TLSKNFW 216
            FP        + ++D + K+            PK TSL               L K F 
Sbjct: 198 LFP-------GKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFP 250

Query: 217 N-------MVKICLAPDPAKRPAAEAQVLQ 239
           N       ++   L  DP KR  AE Q L 
Sbjct: 251 NASPQALDLLSQMLHYDPHKRITAE-QALA 279

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 53/281 (18%), Positives = 97/281 (34%), Gaps = 77/281 (27%)

Query: 4   INHQAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIM 58
            +   E+  K A RE+   + L H NI+ + +    + +L+    Y E    +  L+ + 
Sbjct: 36  ESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVE--RTL--LELLE 91

Query: 59  TYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
                  P A +  +                  + L+ ++Y     + H++I   +IL  
Sbjct: 92  ASPGGLPPDAVRSYIW-----------------QLLQAIAYCHSHNIIHRDIKPENIL-- 132

Query: 119 IFNDDT---------RNWISSSSS------ITTWAAAPEVVNFGDDYYSCKSDIWLIGIT 163
           +              R   +  +S       T W  APE++  GD  Y    D+W IG  
Sbjct: 133 VSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELL-VGDTNYGKPVDVWAIGCI 191

Query: 164 ALQ-------FP--------------CGGLPVSRRQDLDIMTKMLMKQPKSTSLQV-APN 201
             +       FP               G LP S         ++    P+   +    P+
Sbjct: 192 MAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPS-------HQELFSSNPRFAGVAFPEPS 244

Query: 202 EDTTHGTR---TLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
           +  +   R    +S    + +K CL  DP +R   + ++LQ
Sbjct: 245 QPESLERRYPGKVSSPALDFLKACLRMDPKERLTCD-ELLQ 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 42.7 bits (100), Expect = 8e-05
 Identities = 51/236 (21%), Positives = 94/236 (39%), Gaps = 49/236 (20%)

Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
           L  E+   +   H N++ +Y + +   +L+        G+L  I+T+  +N         
Sbjct: 66  LFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------ 119

Query: 74  SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISS--- 130
                  I   CL++     L+ LSYL  +G+ H++I +  IL      D R  +S    
Sbjct: 120 -------IATVCLSV-----LRALSYLHNQGVIHRDIKSDSIL---LTSDGRIKLSDFGF 164

Query: 131 ----SSSI--------TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
               S  +        T +  APEV++     Y  + DIW +GI  ++   G  P     
Sbjct: 165 CAQVSKEVPKRKSLVGTPYWMAPEVISRLP--YGTEVDIWSLGIMVIEMIDGEPPYFNEP 222

Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
            L  M ++    P        P    +H   ++ + F +++   L  +P++R  A+
Sbjct: 223 PLQAMRRIRDNLP--------PRVKDSHKVSSVLRGFLDLM---LVREPSQRATAQ 267

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 42.5 bits (100), Expect = 8e-05
 Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 33/160 (20%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN 75
           REI   K L+HPNI+ +   + ++ +L Y     +   L   M   PL S     LI S 
Sbjct: 48  REISLLKELNHPNIVKLLDVIHTENKL-YLVFEFLHQDLKKFMDASPL-SGIPLPLIKSY 105

Query: 76  RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNI--------SAGHI------LHNIFN 121
                           + L+GL++     + H+++        + G I      L   F 
Sbjct: 106 LF--------------QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 151

Query: 122 DDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIG 161
              R +  +   +T W  APE++  G  YYS   DIW +G
Sbjct: 152 VPVRTY--THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLG 188

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 42/259 (16%), Positives = 83/259 (32%), Gaps = 80/259 (30%)

Query: 5   NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI------GSLDS-I 57
           +   ++  +  RE    + L HPNI+ +      +  L       ++      G L   +
Sbjct: 39  DASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPL------MIVMEYMPGGDLLDYL 92

Query: 58  MTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH 117
              RP     +  L              L IA     +G+ YL+ +   H++++A + L 
Sbjct: 93  RKNRPKELSLSDLLSF-----------ALQIA-----RGMEYLESKNFIHRDLAARNCL- 135

Query: 118 NIFNDDT---------RNWISSSSSITTWAA-------APEVVNFGDDYYSCKSDIWLIG 161
            +  +           R+ +                  APE +  G   ++ KSD+W  G
Sbjct: 136 -VGENLVVKISDFGLSRD-LYDDDYYKVKGGKLPIRWMAPESLKEGK--FTSKSDVWSFG 191

Query: 162 ITAL-------QFPCGGLPVSRRQDL--DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLS 212
           +  L       + P  G+      ++   +     + +P +                   
Sbjct: 192 VL-LWEIFTLGEEPYPGMSN---AEVLEYLKKGYRLPKPPNC-----------------P 230

Query: 213 KNFWNMVKICLAPDPAKRP 231
              + ++  C A DP  RP
Sbjct: 231 PELYKLMLQCWAEDPEDRP 249

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 34/170 (20%)

Query: 7   QAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQL-----FYAEIACMIGSLDSIMTY 60
           Q+E +AK A RE+   KH+ H N+I +         L     FY  +  M   L  +M +
Sbjct: 53  QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH 112

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-- 118
             L+      L+                   + LKGL Y+   G+ H+++  G++  N  
Sbjct: 113 EKLSEDRIQFLVY------------------QMLKGLKYIHAAGIIHRDLKPGNLAVNED 154

Query: 119 ----IFNDDTRNWISSSSS---ITTWAAAPEVVNFGDDYYSCKSDIWLIG 161
               I +        S  +   +T W  APEV+     +Y+   DIW +G
Sbjct: 155 CELKILDFGLARQTDSEMTGYVVTRWYRAPEVI-LNWMHYTQTVDIWSVG 203

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 38/225 (16%)

Query: 25  SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD 84
           +HPN++  Y        +FY     + G L  ++     N  + T+L+       G  +D
Sbjct: 77  NHPNVVKFYG-------MFYKADKLVGGQLWLVLEL--CNGGSVTELV-KGLLICGQRLD 126

Query: 85  CLAIAH--KETLKGLSYLQGEGLFHKNISAGHIL-----------HNIFNDDTRNWISSS 131
              I++     L GL +L    + H+++   +IL             +    T   +  +
Sbjct: 127 EAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRN 186

Query: 132 SSI-TTWAAAPEVVNFGDDY---YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKML 187
           +S+ T +  APEV+     Y   Y  + D+W +GITA++   G  P+     +    K L
Sbjct: 187 TSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV----KTL 242

Query: 188 MKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
            K P++          T        ++F + +  CL  D   RP+
Sbjct: 243 FKIPRNPP-------PTLLHPEKWCRSFNHFISQCLIKDFEARPS 280

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 28/156 (17%)

Query: 92  ETLKGLSYLQGEGLFHKNISAGHILHNIFN-------------DDTRNWISSSSSITTWA 138
           E L GL +L      H+++   +IL                    TR   ++S     W 
Sbjct: 132 EALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWM 191

Query: 139 AAPEVVNFG---DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS 195
           A PEV+      D  Y  + D+W +GITA++   G  P++   DL  M + L K P++  
Sbjct: 192 A-PEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLA---DLHPM-RALFKIPRNPP 246

Query: 196 LQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
                   T H     S  F + ++ CL  D  KRP
Sbjct: 247 -------PTLHQPELWSNEFNDFIRKCLTKDYEKRP 275

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 50/225 (22%)

Query: 26  HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC 85
           HPNI+ +Y + +   +L+        G+L  I+T+  +N                I   C
Sbjct: 75  HPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ-------------IATVC 121

Query: 86  LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISS-------SSSI---- 134
           LA+     LK LS+L  +G+ H++I +  IL      D R  +S        S  +    
Sbjct: 122 LAV-----LKALSFLHAQGVIHRDIKSDSIL---LTSDGRVKLSDFGFCAQVSKEVPRRK 173

Query: 135 ----TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQ 190
               T +  APEV++     Y  + DIW +GI  ++   G  P      L  M ++    
Sbjct: 174 SLVGTPYWMAPEVIS--RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL 231

Query: 191 PKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR-PAAE 234
           P        P     H      ++F   +   L  DPA+R  AAE
Sbjct: 232 P--------PKLKNLHKVSPRLRSF---LDRMLVRDPAQRATAAE 265

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 36/176 (20%)

Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI-GSLDSIMTYRPLNSPAATQLI 72
             +E+   K L H ++I ++  + S  +  Y     M  GSL +      L SP    L 
Sbjct: 49  FQKEVQALKRLRHKHLISLF-AVCSVGEPVYIITELMEKGSLLAF-----LRSPEGQVLP 102

Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL--------------HN 118
           +++       V           +G++YL+ +   H++++A +IL                
Sbjct: 103 VASLIDMACQV----------AEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLAR 152

Query: 119 IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLP 173
           +  +D   ++SS   I     APE  + G   +S KSD+W  GI   + F  G +P
Sbjct: 153 LIKEDV--YLSSDKKIPYKWTAPEAASHG--TFSTKSDVWSFGILLYEMFTYGQVP 204

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 48/236 (20%), Positives = 91/236 (38%), Gaps = 49/236 (20%)

Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
           L  E+   +   H N++ +YK+ +   +L+             +M +  L   A T ++ 
Sbjct: 65  LFNEVVIMRDYQHQNVVEMYKSYLVGEELWV------------LMEF--LQGGALTDIVS 110

Query: 74  SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISS--- 130
             R    +  + +A   +  L+ L YL  +G+ H++I +  IL  +   D R  +S    
Sbjct: 111 QTR----LNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL---DGRVKLSDFGF 163

Query: 131 ----SSSI--------TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
               S  +        T +  APEV++     Y  + DIW +GI  ++   G  P     
Sbjct: 164 CAQISKDVPKRKSLVGTPYWMAPEVIS--RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS 221

Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
            +  M ++    P        P     H    + ++F   +   L  +P +R  A+
Sbjct: 222 PVQAMKRLRDSPP--------PKLKNAHKISPVLRDFLERM---LTREPQERATAQ 266

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 60/231 (25%)

Query: 24  LSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV 83
           L H N+I +Y  +++   +   E+A + GSL        L   A    ++S    Y    
Sbjct: 53  LDHENLIRLYGVVLTHPLMMVTELAPL-GSL-----LDRLRKDALGHFLISTLCDY---- 102

Query: 84  DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT----------------RNW 127
             + IA      G+ YL+ +   H++++A +IL  + +DD                  ++
Sbjct: 103 -AVQIA-----NGMRYLESKRFIHRDLAARNIL--LASDDKVKIGDFGLMRALPQNEDHY 154

Query: 128 ISSSSSITTWA-AAPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDLDIMTK 185
           +        +A  APE +      +S  SD+W+ G+T  + F  G  P +      I+ K
Sbjct: 155 VMEEHLKVPFAWCAPESLRTRT--FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKK 212

Query: 186 M-----LMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
           +      +++P++    +                 +N++  C A +PA RP
Sbjct: 213 IDKEGERLERPEACPQDI-----------------YNVMLQCWAHNPADRP 246

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 18/103 (17%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN 75
           RE+   KHL H NII +    IS  +  Y     +   L  ++T RPL      Q  +  
Sbjct: 58  RELKLLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRPL-EKQFIQYFL-- 114

Query: 76  RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
              Y I            L+GL Y+   G+ H+++   +IL N
Sbjct: 115 ---YQI------------LRGLKYVHSAGVVHRDLKPSNILIN 142

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 21/154 (13%)

Query: 94  LKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTR--NWISSSSSITTWAAAPEV 143
           +KGL+YL    + H+++   ++L N         F   T+  N I+ +   T    APE 
Sbjct: 105 VKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPER 164

Query: 144 VNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQ--DLDIMTKMLMKQPKSTSLQVAPN 201
           ++   + Y   SD+W +GI+ ++   G  P  + Q     +M   L++        V P 
Sbjct: 165 IS--GEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPV 222

Query: 202 EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA 235
                     S+ F + +  C+   P +RPA E 
Sbjct: 223 GQ-------FSEKFVHFITQCMRKQPKERPAPEN 249

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 59/249 (23%), Positives = 96/249 (38%), Gaps = 45/249 (18%)

Query: 4   INHQAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
           IN Q +   +L   EI   K L +PNI+    + +   +LF        GSL  ++T   
Sbjct: 52  INLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETC 111

Query: 63  LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--- 119
           ++                     +A   +E L+ L +L    + H++I + ++L  +   
Sbjct: 112 MDEAQ------------------IAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGS 153

Query: 120 -------FNDDTRNWISSSSSI--TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
                  F        S  S++  T +  APEVV      Y  K DIW +GI A++   G
Sbjct: 154 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT--RKAYGPKVDIWSLGIMAIEMVEG 211

Query: 171 GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
             P      L  +   L+    +  LQ             LS  F + +  CL  D  KR
Sbjct: 212 EPPYLNENPLRAL--YLIATNGTPELQ---------NPEKLSPIFRDFLNRCLEMDVEKR 260

Query: 231 PAAEAQVLQ 239
            +A+ ++LQ
Sbjct: 261 GSAK-ELLQ 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 53/244 (21%), Positives = 96/244 (39%), Gaps = 49/244 (20%)

Query: 8   AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPA 67
           ++E + L  EI   K+L H  I+  Y  +  + +           +L   M Y P  S  
Sbjct: 45  SKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE----------KTLTIFMEYMPGGS-- 92

Query: 68  ATQLIMSNRHRYGITVDCLAIAH-KETLKGLSYLQGEGLFHKNI--------SAGHILHN 118
               +      YG   + +   + ++ L+G+SYL    + H++I        SAG++   
Sbjct: 93  ----VKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLG 148

Query: 119 IFNDDTR--------NWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
            F    R          I S +    W  +PEV++   + Y  K+D+W +G T ++    
Sbjct: 149 DFGASKRLQTICMSGTGIRSVTGTPYW-MSPEVIS--GEGYGRKADVWSLGCTVVEMLTE 205

Query: 171 GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
             P +  + +  + K +  QP +  L   P+  + H    L          C+  +   R
Sbjct: 206 KPPWAEYEAMAAIFK-IATQPTNPQL---PSHISEHARDFLG---------CIFVEARHR 252

Query: 231 PAAE 234
           P+AE
Sbjct: 253 PSAE 256

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 37.9 bits (89), Expect = 0.002
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 26/105 (24%)

Query: 140 APEVVNFGDDYYSCKSDIWLIG-----ITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST 194
           +PE+    +  Y+ KSDIW +G     +  L+ P  G        L++  K+L  Q    
Sbjct: 171 SPELCQ--NKPYNYKSDIWSLGCVLYELCTLKHPFEG-----ENLLELALKILKGQYPPI 223

Query: 195 SLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
             Q              S    N+V   L  DP +RP+  AQ+LQ
Sbjct: 224 PSQY-------------SSELRNLVSSLLQKDPEERPSI-AQILQ 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 13/94 (13%)

Query: 140 APEVVNFGDDY--YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQ 197
           APE +N   +   Y  KSD+W +GIT ++   G  P    +      K ++++P S  L 
Sbjct: 171 APERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP-SPQL- 228

Query: 198 VAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
             P E         S  F + V  CL  +  +RP
Sbjct: 229 --PAE-------KFSPEFQDFVNKCLKKNYKERP 253

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 44/188 (23%)

Query: 7   QAEEYAKLAREIYRYKHLSHPNIIPIYKTMI--SQRQLFYAEIACMIGSLDSIMTYRPLN 64
           Q E    L +EI     L+HP+II +       S   LF   +A   GS+  ++      
Sbjct: 43  QEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAG--GSVSHLL------ 94

Query: 65  SPAATQLIMSNRHRYGITVDCLAIAH-KETLKGLSYLQGEGLFHKNISAGHIL-----HN 118
                        +YG   + + I + ++ L+GLSYL    + H+++   ++L       
Sbjct: 95  ------------SKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQR 142

Query: 119 IFNDDTRNWISSSSSIT-----------TWA-AAPEVVNFGDDY-YSCKSDIWLIGITAL 165
           +   D       ++  T           T A  APEV+  G+ Y  SC  D+W +G   +
Sbjct: 143 LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLR-GEQYGRSC--DVWSVGCVII 199

Query: 166 QFPCGGLP 173
           +      P
Sbjct: 200 EMATAKPP 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 39/159 (24%)

Query: 96  GLSYLQGEGLFHKNISAGHIL---HNI-----------FNDDTRNWISSSSSITTWAAAP 141
           G++YL+ +   H++++A ++L   +NI             +D       +     W A P
Sbjct: 115 GMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTA-P 173

Query: 142 EVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPN 201
           E   +  + +S KSD+W  GI   +               I+T   M  P  T+ +V   
Sbjct: 174 EAALY--NRFSIKSDVWSFGILLTE---------------IVTYGRMPYPGMTNAEVLQQ 216

Query: 202 EDTTHGTR-----TLSKNFWNMVKICLAPDPAKRPAAEA 235
            D   G R        K  ++++  C   DP  RP  E 
Sbjct: 217 VD--QGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFET 253

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 47/233 (20%), Positives = 85/233 (36%), Gaps = 65/233 (27%)

Query: 24  LSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY 79
           LSHP ++ +Y     +  +     + E  C+    D +   R   S   T L M      
Sbjct: 56  LSHPKLVQLYGVCTERSPICLVFEFMEHGCLS---DYLRAQRGKFS-QETLLGM------ 105

Query: 80  GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL--------------HNIFNDDTR 125
                CL +      +G++YL+   + H++++A + L                   DD  
Sbjct: 106 -----CLDVC-----EGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155

Query: 126 NWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDLDIMT 184
              + +     W++ PEV +F    YS KSD+W  G+   + F  G  P   R + +++ 
Sbjct: 156 TSSTGTKFPVKWSS-PEVFSFSK--YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVV- 211

Query: 185 KMLMKQPKSTSLQVAPNEDTTHGTRTL-----SKNFWNMVKICLAPDPAKRPA 232
                            E    G R       S++ + +++ C    P  RP+
Sbjct: 212 -----------------ETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPS 247

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 14/95 (14%)

Query: 140 APEVVNFGD--DYYSCKSDIWLIGITALQFPCGGLPVSR-RQDLDIMTKMLMKQPKSTSL 196
           APE ++  D    Y  ++D+W +GI+ ++   G  P    + + +++TK+L ++P S   
Sbjct: 182 APERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLP- 240

Query: 197 QVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
              PNE         S +F + V +CL  D  KRP
Sbjct: 241 ---PNEG-------FSPDFCSFVDLCLTKDHRKRP 265

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 53/176 (30%)

Query: 82  TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSIT------ 135
           T   +A+   +   G+ +L      H++++A            RN + SS          
Sbjct: 116 TKQKVALCT-QIALGMDHLSNARFVHRDLAA------------RNCLVSSQREVKVSLLS 162

Query: 136 ---------------TWAA----APEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVS 175
                                  APE V   +D +S KSD+W  G+   + F  G LP  
Sbjct: 163 LSKDVYNSEYYKLRNALIPLRWLAPEAVQ--EDDFSTKSDVWSFGVLMWEVFTQGELPFY 220

Query: 176 RRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
              D +++ ++     ++  L++   E             + ++  C A +P  RP
Sbjct: 221 GLSDEEVLNRL-----QAGKLELPVPEGC-------PSRLYKLMTRCWAVNPKDRP 264

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	245
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	99.98
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.98
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.98
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.97
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.96
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.96
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.96
KOG3653	534	consensus Transforming growth factor beta/activin	99.96
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.96
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.95
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.95
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.94
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.94
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.94
KOG1152	772	consensus Signal transduction serine/threonine kin	99.94
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.93
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.92
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.9
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.9
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.86
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.85
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.84
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.84
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.83
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.79
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.79
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.78
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.74
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.71
PRK09188	365	serine/threonine protein kinase; Provisional	99.7
PRK12274	218	serine/threonine protein kinase; Provisional	99.69
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.68
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.68
PRK10345	210	hypothetical protein; Provisional	99.66
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.63
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.6
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.52
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.46
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.38
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.36
PRK14879	211	serine/threonine protein kinase; Provisional	99.34
KOG1243	690	consensus Protein kinase [General function predict	99.3
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.29
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.29
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.28
smart00090	237	RIO RIO-like kinase.	99.23
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.18
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.15
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.12
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.08
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.06
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.92
COG4248	637	Uncharacterized protein with protein kinase and he	98.86
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.85
KOG3087	229	consensus Serine/threonine protein kinase [General	98.8
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.76
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.68
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.64
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.59
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.5
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.46
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.37
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.32
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.1
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.06
PRK09902	216	hypothetical protein; Provisional	97.94
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.91
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.8
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.61
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.57
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.31
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.14
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.05
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.91
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.82
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.22
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.73
KOG1235	538	consensus Predicted unusual protein kinase [Genera	95.54
PLN02876	822	acyl-CoA dehydrogenase	94.78
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	94.61
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	94.43
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	94.11
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	93.89
PRK10593	297	hypothetical protein; Provisional	93.62
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	91.68
PHA03111	444	Ser/Thr kinase; Provisional	87.57
PF01636	239	APH: Phosphotransferase enzyme family This family	87.37
KOG1236	565	consensus Predicted unusual protein kinase [Genera	87.04
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	85.71
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	84.24
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	83.04
KOG2268	465	consensus Serine/threonine protein kinase [Signal	82.24
KOG2270	520	consensus Serine/threonine protein kinase involved	81.11
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	80.95
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	80.52

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-52  Score=322.18  Aligned_cols=207  Identities=23%  Similarity=0.280  Sum_probs=172.3

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ...+.+|+++|++|+|||||+++++|..++..|+|+||++||+|-+.+-.                 ...+.++..+.++
T Consensus       220 ~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~-----------------nk~l~ed~~K~~f  282 (475)
T KOG0615|consen  220 TRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVA-----------------NKYLREDLGKLLF  282 (475)
T ss_pred             hhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHh-----------------ccccccchhHHHH
Confidence            34478999999999999999999999999999999999999999655432                 4567788889999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecCC-CCCCCchh
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNFG-DDYYSCKS  155 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~-~~~~~~~~  155 (245)
                      .|++.|+.|||++||+||||||+|||++.           ||+++.....+   +.+|||.|.|||++... ...+..++
T Consensus       283 ~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kV  362 (475)
T KOG0615|consen  283 KQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKV  362 (475)
T ss_pred             HHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchh
Confidence            99999999999999999999999999876           99998775444   78899999999999873 33445689


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||+||+||-+++|.+||.+......+.+...........         .....++++..++|+.||..||++|||+++
T Consensus       363 DiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p---------~~w~~Iseea~dlI~~mL~VdP~~R~s~~e  433 (475)
T KOG0615|consen  363 DIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGP---------LQWDRISEEALDLINWMLVVDPENRPSADE  433 (475)
T ss_pred             eeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccC---------hhhhhhhHHHHHHHHHhhEeCcccCcCHHH
Confidence            99999999999999999999866655343333222111111         111678999999999999999999999999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +|+||||+
T Consensus       434 aL~hpW~~  441 (475)
T KOG0615|consen  434 ALNHPWFK  441 (475)
T ss_pred             HhcChhhh
Confidence            99999996

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-49  Score=300.48  Aligned_cols=211  Identities=24%  Similarity=0.372  Sum_probs=178.6

Q ss_pred             ccccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc-eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            2 IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR-QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         2 ~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      |....++...+++.+|+++++..+|||||.+||+|..++ ...++||||++|||++++..                 -..
T Consensus       112 I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~-----------------~g~  174 (364)
T KOG0581|consen  112 ILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR-----------------VGR  174 (364)
T ss_pred             ecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh-----------------cCC
Confidence            445667888999999999999999999999999999999 49999999999999776652                 256


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCcccccc--CCCCccccccccCceecCCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWI--SSSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~  149 (245)
                      +++..+..++.+|++||.|||+ .+|+||||||+|+|++.        ||.+.....  ..+..||..|||||.+.+  .
T Consensus       175 i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g--~  252 (364)
T KOG0581|consen  175 IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISG--E  252 (364)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhhhcC--C
Confidence            9999999999999999999996 89999999999999987        887665443  347788999999999998  6


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCC-----CchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRR-----QDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      .|+.++||||||++++|+++|+.||...     ...+.+.++....         ++..+   ...+|+++++||..||+
T Consensus       253 ~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p---------pP~lP---~~~fS~ef~~FV~~CL~  320 (364)
T KOG0581|consen  253 SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP---------PPRLP---EGEFSPEFRSFVSCCLR  320 (364)
T ss_pred             cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC---------CCCCC---cccCCHHHHHHHHHHhc
Confidence            7999999999999999999999999874     2234444444322         11111   12599999999999999


Q ss_pred             CCCCCCccHHHHhhccccc
Q 037274          225 PDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .||.+||++.++++|||..
T Consensus       321 Kdp~~R~s~~qLl~Hpfi~  339 (364)
T KOG0581|consen  321 KDPSERPSAKQLLQHPFIK  339 (364)
T ss_pred             CCcccCCCHHHHhcCHHHh
Confidence            9999999999999999964

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.1e-48  Score=312.24  Aligned_cols=204  Identities=23%  Similarity=0.361  Sum_probs=184.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+++.+||++.+.|+|||||+++++|++.++.|+|.|+|..++|..+++.                 ...+++.++
T Consensus        58 k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Kr-----------------rk~ltEpEa  120 (592)
T KOG0575|consen   58 KPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKR-----------------RKPLTEPEA  120 (592)
T ss_pred             CcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHh-----------------cCCCCcHHH
Confidence            566888999999999999999999999999999999999999999999666652                 577999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..+++||+.||.|||+.+|+|||||..|++++.        ||++......    .+.+|||.|.|||++..  ...++.
T Consensus       121 ry~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k--~gHsfE  198 (592)
T KOG0575|consen  121 RYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNK--SGHSFE  198 (592)
T ss_pred             HHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhcc--CCCCCc
Confidence            999999999999999999999999999999887        9998877643    37889999999999986  778999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||+||++|-++.|++||...+-.+.+..+....-              ..+..++.+..+||.++|++||.+|||++
T Consensus       199 vDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y--------------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~  264 (592)
T KOG0575|consen  199 VDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY--------------SMPSHLSAEAKDLIRKLLRPNPSERPSLD  264 (592)
T ss_pred             hhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc--------------ccccccCHHHHHHHHHHhcCCcccCCCHH
Confidence            9999999999999999999999888888888766541              12257899999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      +++.|+||.
T Consensus       265 ~vL~h~Ff~  273 (592)
T KOG0575|consen  265 EVLDHPFFK  273 (592)
T ss_pred             HHhcCHhhh
Confidence            999999993

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-46  Score=290.82  Aligned_cols=223  Identities=26%  Similarity=0.414  Sum_probs=181.1

Q ss_pred             ccccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            2 IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         2 ~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      +++++.....+.+++|++.|+.++||||++++..|..+..+|+||.++.+||+.++++               ..-...+
T Consensus        59 inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik---------------~~~~~Gl  123 (516)
T KOG0582|consen   59 INLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIK---------------TYYPDGL  123 (516)
T ss_pred             eehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHH---------------HHccccc
Confidence            6788888899999999999999999999999999999999999999999999976664               3334569


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc--------cCCCCccccccccCceec
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW--------ISSSSSITTWAAAPEVVN  145 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~--------~~~~~~~~~~y~aPE~~~  145 (245)
                      ++..|..+++++++||.|||.+|.+|||||+.|||++.        ||.+....        ...+..+|++|||||++.
T Consensus       124 ~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~  203 (516)
T KOG0582|consen  124 EEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLM  203 (516)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhh
Confidence            99999999999999999999999999999999999987        43321111        114667899999999965


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCC
Q 037274          146 FGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP  225 (245)
Q Consensus       146 ~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  225 (245)
                      .....|++|+||||||++..|+++|..||.....   ++-+..++........ ...........++..++++|..||+.
T Consensus       204 q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP---mkvLl~tLqn~pp~~~-t~~~~~d~~k~~~ksf~e~i~~CL~k  279 (516)
T KOG0582|consen  204 QQLHGYDFKADIWSFGITACELAHGHAPFSKYPP---MKVLLLTLQNDPPTLL-TSGLDKDEDKKFSKSFREMIALCLVK  279 (516)
T ss_pred             hcccCccchhhhhhhhHHHHHHhcCCCCcccCCh---HHHHHHHhcCCCCCcc-cccCChHHhhhhcHHHHHHHHHHhhc
Confidence            5456799999999999999999999999998544   4444444422221111 11112222366778999999999999


Q ss_pred             CCCCCccHHHHhhccccc
Q 037274          226 DPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       226 ~p~~Rpt~~~~l~~~~f~  243 (245)
                      ||.+|||++++++|+||+
T Consensus       280 DP~kRptAskLlkh~FFk  297 (516)
T KOG0582|consen  280 DPSKRPTASKLLKHAFFK  297 (516)
T ss_pred             CcccCCCHHHHhccHHHh
Confidence            999999999999999996

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-45  Score=280.62  Aligned_cols=205  Identities=19%  Similarity=0.249  Sum_probs=175.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+..|+.+|+.++|||||.+++++.+++..|+|||||.||+|.++++.                 ...+++..+
T Consensus        49 ~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~-----------------~~~l~e~t~  111 (429)
T KOG0595|consen   49 NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRR-----------------RGRLPEATA  111 (429)
T ss_pred             CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHH-----------------cCCCCHHHH
Confidence            567788899999999999999999999999999999999999999999888863                 347999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------------ccCccccccCC---CCccccccccCceecCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------------FNDDTRNWISS---SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~  149 (245)
                      ..++.|++.||++||+++||||||||+|||++.              ||+++......   +.+|+|.|||||++..  .
T Consensus       112 r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~--~  189 (429)
T KOG0595|consen  112 RHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMS--Q  189 (429)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHh--c
Confidence            999999999999999999999999999999875              78877665444   6788999999999987  6


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      .|+.|+|+||+|+++|++++|+.||...+..+....+.+...      .     ....+...+....+++...++.+|.+
T Consensus       190 ~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~------~-----~~~~~~~~s~~~~~Ll~~ll~~~~~~  258 (429)
T KOG0595|consen  190 QYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE------I-----VPVLPAELSNPLRELLISLLQRNPKD  258 (429)
T ss_pred             cccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc------c-----cCchhhhccCchhhhhhHHHhcCccc
Confidence            799999999999999999999999998777776654433221      1     11122556677789999999999999


Q ss_pred             CccHHHHhhccc
Q 037274          230 RPAAEAQVLQEM  241 (245)
Q Consensus       230 Rpt~~~~l~~~~  241 (245)
                      |.+.++.+.|++
T Consensus       259 ~~~~~~~~~~~~  270 (429)
T KOG0595|consen  259 RISFEDFFDHPF  270 (429)
T ss_pred             cCchHHhhhhhh
Confidence            999998888765

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-46  Score=295.72  Aligned_cols=203  Identities=25%  Similarity=0.369  Sum_probs=177.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+-+.+|+.+|+.++|+|||++++.+...+.+|+||||++||+|.+++.                  ...+++.++..+
T Consensus       313 ~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt------------------~~~~~E~qIA~I  374 (550)
T KOG0578|consen  313 KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVT------------------KTRMTEGQIAAI  374 (550)
T ss_pred             chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhh------------------cccccHHHHHHH
Confidence            45678999999999999999999999998999999999999999988776                  355899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +++++.||+|||.+||+|||||.+|||++.        ||+........    +..|||.|||||++..  ..|++++||
T Consensus       375 cre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtr--k~YG~KVDI  452 (550)
T KOG0578|consen  375 CREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTR--KPYGPKVDI  452 (550)
T ss_pred             HHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhh--cccCccccc
Confidence            999999999999999999999999999876        77766554433    6778999999999986  889999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||++++||+.|.+||...+....+..+.....-.           ...+..+|+.+++|+.+||+.|+.+|+++.++|
T Consensus       453 WSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~-----------lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL  521 (550)
T KOG0578|consen  453 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPK-----------LKNPEKLSPELKDFLDRCLVVDVEQRASAKELL  521 (550)
T ss_pred             hhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCC-----------cCCccccCHHHHHHHHHHhhcchhcCCCHHHHh
Confidence            999999999999999999866666666555443211           122378999999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +||||.
T Consensus       522 ~HpFl~  527 (550)
T KOG0578|consen  522 EHPFLK  527 (550)
T ss_pred             cChhhh
Confidence            999985

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-45  Score=288.11  Aligned_cols=203  Identities=21%  Similarity=0.309  Sum_probs=178.8

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ++..+.+..|-.+|.+| .||.|+++|..|.++..+|+|+||+++|+|.++|+.                 ...+++.+.
T Consensus       114 e~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K-----------------~Gsfde~ca  176 (604)
T KOG0592|consen  114 EKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKK-----------------YGSFDETCA  176 (604)
T ss_pred             hcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHH-----------------hCcchHHHH
Confidence            34556788899999999 799999999999999999999999999999887763                 467999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----------------CCCccccccccC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----------------SSSSITTWAAAP  141 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----------------~~~~~~~~y~aP  141 (245)
                      +.++.+|+.||.|||++|||||||||+|||++.        ||.++.....                 ..++||..|.+|
T Consensus       177 R~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSP  256 (604)
T KOG0592|consen  177 RFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSP  256 (604)
T ss_pred             HHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCH
Confidence            999999999999999999999999999999987        8876543221                 246789999999


Q ss_pred             ceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHH
Q 037274          142 EVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       142 E~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  221 (245)
                      |++..  ...++.+|+|+|||++|+|+.|.+||.+.++.-..++++....              .++.+.++.+++||++
T Consensus       257 ElL~~--~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y--------------~fp~~fp~~a~dLv~K  320 (604)
T KOG0592|consen  257 ELLND--SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDY--------------EFPEGFPEDARDLIKK  320 (604)
T ss_pred             HHhcC--CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcc--------------cCCCCCCHHHHHHHHH
Confidence            99998  6689999999999999999999999999999888888876541              2236788999999999


Q ss_pred             hcCCCCCCCccHHHHhhccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +|..||.+|+|+++|.+||||.
T Consensus       321 LLv~dp~~Rlt~~qIk~HpFF~  342 (604)
T KOG0592|consen  321 LLVRDPSDRLTSQQIKAHPFFE  342 (604)
T ss_pred             HHccCccccccHHHHhhCcccc
Confidence            9999999999999999999995

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.9e-46  Score=272.52  Aligned_cols=200  Identities=21%  Similarity=0.312  Sum_probs=168.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEE-EEEeCce-eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYK-TMISQRQ-LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~-~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      +.+..++...|+.+|++|+|||||++|+ .+..++. ++++||+|.+|+|..+++.             ...++..+++.
T Consensus        58 d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~-------------~K~qkr~ipE~  124 (375)
T KOG0591|consen   58 DAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKH-------------FKKQKRLIPEK  124 (375)
T ss_pred             cHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHH-------------HHhccccCchH
Confidence            4567788999999999999999999999 5666666 9999999999999998862             22346789999


Q ss_pred             HHHHHHHHHHHHHHHHHh--CC--cccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCC
Q 037274           85 CLAIAHKETLKGLSYLQG--EG--LFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~--~~--ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~  148 (245)
                      .+|.++.|++.||.++|+  .+  ++||||||.||+++.        ||+++......    ...|||.||+||.+.+  
T Consensus       125 ~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~--  202 (375)
T KOG0591|consen  125 TVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHE--  202 (375)
T ss_pred             HHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhc--
Confidence            999999999999999999  45  899999999999987        77766555443    5678999999999998  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ..|++++||||+||++|||+.-.+||.+.+-.+..+.+.+..       .+     .-+...+|.++..+|..|+.+||.
T Consensus       203 ~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd-------~~-----~~p~~~YS~~l~~li~~ci~vd~~  270 (375)
T KOG0591|consen  203 SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGD-------YP-----PLPDEHYSTDLRELINMCIAVDPE  270 (375)
T ss_pred             CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCC-------CC-----CCcHHHhhhHHHHHHHHHccCCcc
Confidence            779999999999999999999999999986666666554432       00     011167899999999999999999


Q ss_pred             CCccH
Q 037274          229 KRPAA  233 (245)
Q Consensus       229 ~Rpt~  233 (245)
                      .||+.
T Consensus       271 ~RP~t  275 (375)
T KOG0591|consen  271 QRPDT  275 (375)
T ss_pred             cCCCc
Confidence            99985

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-44  Score=274.88  Aligned_cols=203  Identities=19%  Similarity=0.211  Sum_probs=177.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+....|.++|..++||.||+++..|++.+.+|+|++|+.||.|-..+++                 ...++++.+..
T Consensus        67 ~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~-----------------eg~F~E~~arf  129 (357)
T KOG0598|consen   67 KEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQR-----------------EGRFSEDRARF  129 (357)
T ss_pred             hhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHh-----------------cCCcchhHHHH
Confidence            4678899999999999999999999999999999999999999999666652                 56799999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++..|+.||.|||+.|||||||||+|||++.        ||+++.....    .+.+||+.|||||.+.+  ..++..+|
T Consensus       130 YlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~--~gy~~~vD  207 (357)
T KOG0598|consen  130 YLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLG--KGYDKAVD  207 (357)
T ss_pred             HHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhc--CCCCcccc
Confidence            9999999999999999999999999999987        8888754433    35788999999999998  68999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc----c
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP----A  232 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----t  232 (245)
                      .||||+++|+|++|.+||.+.+.....+.+...-.      .       ..+..++.+.+++++++|..||++|.    +
T Consensus       208 WWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~------~-------~~p~~ls~~ardll~~LL~rdp~~RLg~~~d  274 (357)
T KOG0598|consen  208 WWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL------P-------LPPGYLSEEARDLLKKLLKRDPRQRLGGPGD  274 (357)
T ss_pred             hHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC------C-------CCCccCCHHHHHHHHHHhccCHHHhcCCCCC
Confidence            99999999999999999999887777777654430      1       11144889999999999999999996    6


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      +.++-+||||.
T Consensus       275 ~~~ik~HpfF~  285 (357)
T KOG0598|consen  275 AEEIKRHPFFK  285 (357)
T ss_pred             hHHhhcCcccc
Confidence            88999999995

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-44  Score=284.93  Aligned_cols=203  Identities=20%  Similarity=0.330  Sum_probs=173.9

Q ss_pred             HHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ...+.+.+|+.+++.+. ||||+++++++.+...+++||||+.+|+|.+++..                 ..++.+....
T Consensus        61 ~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-----------------~g~l~E~~ar  123 (370)
T KOG0583|consen   61 KLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-----------------KGRLKEDEAR  123 (370)
T ss_pred             ccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-----------------cCCCChHHHH
Confidence            45667779999999999 99999999999999999999999999999776652                 4678889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCcccc----ccCCCCccccccccCceecCCCC-CCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRN----WISSSSSITTWAAAPEVVNFGDD-YYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~-~~~~  153 (245)
                      .++.|++.|++|+|+.||+||||||+|+|++.         ||++...    ....+.+|++.|+|||++.+ +. .-+.
T Consensus       124 ~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~-~~~Y~g~  202 (370)
T KOG0583|consen  124 KYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSG-KGTYSGK  202 (370)
T ss_pred             HHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCC-CCCcCCc
Confidence            99999999999999999999999999999886         8887755    34557899999999999997 33 3368


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccc-cHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTL-SKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||+|++||-|++|+.||...+.......+.....     ..+         ..+ ++++.+++++||.+||.+|+|
T Consensus       203 ~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~-----~~p---------~~~~S~~~~~Li~~mL~~~P~~R~t  268 (370)
T KOG0583|consen  203 AADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF-----KIP---------SYLLSPEARSLIEKMLVPDPSTRIT  268 (370)
T ss_pred             hhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc-----cCC---------CCcCCHHHHHHHHHHcCCCcccCCC
Confidence            99999999999999999999999766666655433221     111         334 899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      +.+++.||||+
T Consensus       269 ~~~i~~h~w~~  279 (370)
T KOG0583|consen  269 LLEILEHPWFQ  279 (370)
T ss_pred             HHHHhhChhhc
Confidence            99999999997

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-44  Score=258.85  Aligned_cols=208  Identities=19%  Similarity=0.225  Sum_probs=176.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .+.+++.+|+++-+.|+||||+++.+...+.+..|+|+|+++|++|..=|               ..  +..+++..+..
T Consensus        52 ~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eI---------------V~--R~~ySEa~aSH  114 (355)
T KOG0033|consen   52 RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI---------------VA--REFYSEADASH  114 (355)
T ss_pred             ccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHH---------------HH--HHHHHHHHHHH
Confidence            37889999999999999999999999999999999999999999993222               11  24577888999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecCCCCCCCch
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +++||+++|.|+|++||||||+||+|+++..           ||++.....+.   ...|||.|||||++..  .+++..
T Consensus       115 ~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrk--dpy~kp  192 (355)
T KOG0033|consen  115 CIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKK--DPYSKP  192 (355)
T ss_pred             HHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhc--CCCCCc
Confidence            9999999999999999999999999999865           88887776444   3556999999999986  889999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|||+.|++||-++.|++||.+.+....++.++.....     .+.+     ....++++.++++++||..||.+|+|+.
T Consensus       193 vDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd-----~~~~-----~w~~is~~Ak~LvrrML~~dP~kRIta~  262 (355)
T KOG0033|consen  193 VDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD-----YPSP-----EWDTVTPEAKSLIRRMLTVNPKKRITAD  262 (355)
T ss_pred             chhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC-----CCCc-----ccCcCCHHHHHHHHHHhccChhhhccHH
Confidence            99999999999999999999997777777777655421     1111     1266889999999999999999999999


Q ss_pred             HHhhccccccC
Q 037274          235 AQVLQEMWHFR  245 (245)
Q Consensus       235 ~~l~~~~f~~~  245 (245)
                      |.|+|||-.-|
T Consensus       263 EAL~HpWi~~r  273 (355)
T KOG0033|consen  263 EALKHPWICNR  273 (355)
T ss_pred             HHhCCchhcch
Confidence            99999996543

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-44  Score=275.44  Aligned_cols=205  Identities=25%  Similarity=0.344  Sum_probs=164.1

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCc--eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQR--QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .+.+.+|+++|++|+|||||+++|......  .++++|||+.+|+|.+++..               .+. .+++..+..
T Consensus        58 ~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~---------------~g~-~l~E~~v~~  121 (313)
T KOG0198|consen   58 SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKR---------------YGG-KLPEPLVRR  121 (313)
T ss_pred             HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHH---------------cCC-CCCHHHHHH
Confidence            777999999999999999999999744443  69999999999999776652               223 699999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCcccccc-------CCCCccccccccCceecCCCCCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWI-------SSSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +.+||++||+|||++|++|+||||+|||++.         ||.++....       .....||+.|||||++..| ....
T Consensus       122 ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g-~~~~  200 (313)
T KOG0198|consen  122 YTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNG-EVAR  200 (313)
T ss_pred             HHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCC-CcCC
Confidence            9999999999999999999999999999965         887665542       2246679999999999841 2234


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++|||||||++.||+||+.||...  ................+         ..+..++++.++|+.+|++.||++|||
T Consensus       201 ~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~~~P---------~ip~~ls~~a~~Fl~~C~~~~p~~Rpt  269 (313)
T KOG0198|consen  201 RESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGREDSLP---------EIPDSLSDEAKDFLRKCFKRDPEKRPT  269 (313)
T ss_pred             ccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccCCCC---------CCCcccCHHHHHHHHHHhhcCcccCcC
Confidence            6999999999999999999999873  12222222222111111         223668999999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++|+|||-.
T Consensus       270 a~eLL~hpf~~  280 (313)
T KOG0198|consen  270 AEELLEHPFLK  280 (313)
T ss_pred             HHHHhhChhhh
Confidence            99999999864

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.6e-44  Score=262.13  Aligned_cols=208  Identities=18%  Similarity=0.247  Sum_probs=177.2

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +-.+...+|+.+|+++ .||||+++.+.++++...++|+|.++.|.|-|++..                 ...+++....
T Consensus        64 ~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts-----------------~VtlSEK~tR  126 (411)
T KOG0599|consen   64 EMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTS-----------------KVTLSEKETR  126 (411)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhh-----------------heeecHHHHH
Confidence            4567788999999999 599999999999999999999999999999777763                 4678999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecC----CCCCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNF----GDDYYS  152 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~----~~~~~~  152 (245)
                      .+++|+.+|++|||.++||||||||+|||+++        ||.+.....+.   ..+|||+|+|||.+..    +...|+
T Consensus       127 ~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs  206 (411)
T KOG0599|consen  127 RIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYS  206 (411)
T ss_pred             HHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCcc
Confidence            99999999999999999999999999999887        88887665544   5678999999998864    456789


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ..+|+|++|+++|.++.|.+||.-....-++.-++...   ..+..+.       ..+++....++|++||+.||.+|.|
T Consensus       207 ~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGk---yqF~spe-------Wadis~~~KdLIsrlLqVdp~~Rit  276 (411)
T KOG0599|consen  207 KEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGK---YQFRSPE-------WADISATVKDLISRLLQVDPTKRIT  276 (411)
T ss_pred             chhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcc---cccCCcc-------hhhccccHHHHHHHHHeeCchhccc
Confidence            99999999999999999999999866555555554433   2222111       1678899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      +++.|.||||.
T Consensus       277 ake~LaHpff~  287 (411)
T KOG0599|consen  277 AKEALAHPFFI  287 (411)
T ss_pred             HHHHhcChHHH
Confidence            99999999994

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-42  Score=275.61  Aligned_cols=202  Identities=22%  Similarity=0.346  Sum_probs=169.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc-eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQR-QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.|.+|+.+|.+|+|||||+++|++.+.. ..++||||+++|+|.+++...               .+..+++..+..
T Consensus        82 ~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~---------------~~~~l~~~~~l~  146 (362)
T KOG0192|consen   82 SRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKK---------------RKRKLPLKVRLR  146 (362)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhc---------------ccCCCCHHHHHH
Confidence            3779999999999999999999999998877 799999999999998877631               256799999999


Q ss_pred             HHHHHHHHHHHHHhCC-cccccCCCCceeccc---------ccCcccccc---CC-CCccccccccCceecCCCCCCCch
Q 037274           89 AHKETLKGLSYLQGEG-LFHKNISAGHILHNI---------FNDDTRNWI---SS-SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~-ivH~dlkp~nil~~~---------f~~~~~~~~---~~-~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ++.||+.|+.|||+++ ||||||||+|||++.         ||+++....   .. ...||+.|||||++.+....++.+
T Consensus       147 ~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K  226 (362)
T KOG0192|consen  147 IALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEK  226 (362)
T ss_pred             HHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCcc
Confidence            9999999999999999 999999999999886         888765543   22 256799999999998422579999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|||+||..||.................+..            .+..+++.+..++..||..||.+||++.
T Consensus       227 ~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~  294 (362)
T KOG0192|consen  227 SDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPP------------IPKECPPHLSSLMERCWLVDPSRRPSFL  294 (362)
T ss_pred             chhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC------------CCccCCHHHHHHHHHhCCCCCCcCCCHH
Confidence            9999999999999999999999777555555544432111            1144889999999999999999999999


Q ss_pred             HHhh
Q 037274          235 AQVL  238 (245)
Q Consensus       235 ~~l~  238 (245)
                      +++.
T Consensus       295 ei~~  298 (362)
T KOG0192|consen  295 EIVS  298 (362)
T ss_pred             HHHH
Confidence            8864

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-43  Score=277.42  Aligned_cols=212  Identities=21%  Similarity=0.275  Sum_probs=179.2

Q ss_pred             HHHHHHHHhhCC-CCCeeeEEEEEEeCc-eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           14 LAREIYRYKHLS-HPNIIPIYKTMISQR-QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        14 ~~~E~~~l~~l~-h~~Iv~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      =.+|+..|++|+ ||||+++.+.+.+.+ .+++||||++. +|+++++.               + +..+++..+..|+.
T Consensus        55 nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~---------------R-~r~fse~~irnim~  117 (538)
T KOG0661|consen   55 NLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKD---------------R-NRLFSESDIRNIMY  117 (538)
T ss_pred             HHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhh---------------c-CCcCCHHHHHHHHH
Confidence            467999999999 999999999988777 89999999986 99888763               2 56799999999999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC---CccccccccCceecCCCCCCCchhhHHHH
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS---SSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      ||++||+|+|.+|+.|||+||+|||++.        ||+++.......   +..|.+|+|||++.. ...|+.+.|+||+
T Consensus       118 QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLr-s~~Ys~pvD~wA~  196 (538)
T KOG0661|consen  118 QILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLR-SGYYSSPVDMWAV  196 (538)
T ss_pred             HHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhh-ccccCCchHHHHH
Confidence            9999999999999999999999999983        999998877663   445999999999875 5679999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCC----------------CCCCCCCcccccHHHHHHHHHhcC
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP----------------NEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      ||+++|+.+-++.|.+.++.+.+.++...+........+.                +..........+.++.++|.+|+.
T Consensus       197 GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~  276 (538)
T KOG0661|consen  197 GCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLA  276 (538)
T ss_pred             HHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhc
Confidence            9999999999999999999998888877665433322221                111111123478899999999999


Q ss_pred             CCCCCCccHHHHhhccccc
Q 037274          225 PDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .||.+|||+.+.++||||+
T Consensus       277 WDP~kRpTA~~al~~pffq  295 (538)
T KOG0661|consen  277 WDPDKRPTASQALQHPFFQ  295 (538)
T ss_pred             CCCccCccHHHHhcCcccc
Confidence            9999999999999999996

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-43  Score=260.61  Aligned_cols=203  Identities=19%  Similarity=0.205  Sum_probs=181.7

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .++.+...+|..+|+.+.||.++++++.+.+.+.+++||||++||.|.++++.                 ..++++...+
T Consensus        85 lKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk-----------------~~rF~e~~ar  147 (355)
T KOG0616|consen   85 LKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRK-----------------SGRFSEPHAR  147 (355)
T ss_pred             HHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHh-----------------cCCCCchhHH
Confidence            45788899999999999999999999999999999999999999999776653                 4679999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCchhhHH
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .++.||+.||+|||+.+|++|||||+|||++.        ||.++...... +.+|||.|+|||.+..  ..++.++|-|
T Consensus       148 FYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~s--k~ynkavDWW  225 (355)
T KOG0616|consen  148 FYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQS--KGYNKAVDWW  225 (355)
T ss_pred             HHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHhhc--CCCCcchhHH
Confidence            99999999999999999999999999999987        88888776554 5678999999999998  7899999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----cH
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----AA  233 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~  233 (245)
                      |||+++|||+.|.+||...+....++.+.....              ..+...+.++++|++.+|+.|-.+|.     ..
T Consensus       226 alGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v--------------~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~  291 (355)
T KOG0616|consen  226 ALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV--------------KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGV  291 (355)
T ss_pred             HHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc--------------cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCc
Confidence            999999999999999999999888888876542              12266889999999999999999993     57


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      .+|..||||+
T Consensus       292 ~dIk~H~wF~  301 (355)
T KOG0616|consen  292 EDIKNHPWFK  301 (355)
T ss_pred             cccccCcccc
Confidence            8899999996

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-43  Score=279.40  Aligned_cols=200  Identities=20%  Similarity=0.309  Sum_probs=174.1

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....++|.+|+++|++|+|+|||+++|.+..++.++|||||++.|+|.++++.               ..+..+....+.
T Consensus       242 ~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~---------------~~~~~l~~~~Ll  306 (468)
T KOG0197|consen  242 SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRT---------------REGGLLNLPQLL  306 (468)
T ss_pred             ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhh---------------cCCCccchHHHH
Confidence            44567889999999999999999999999988899999999999999776652               346778899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC-----CccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS-----SSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|||+|++||+++++|||||.+.|||++.        ||+++.......     ......|.|||.+..  ..++.+
T Consensus       307 ~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~--~~FS~k  384 (468)
T KOG0197|consen  307 DFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNY--GKFSSK  384 (468)
T ss_pred             HHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhh--CCcccc
Confidence            99999999999999999999999999999887        999995443332     122678999999998  569999


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +||||||++|+||.| |+.|+.+.+..+..+.+.+..      +.+.|       ..+|+++.+++..||..+|++|||+
T Consensus       385 SDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~Gy------Rlp~P-------~~CP~~vY~lM~~CW~~~P~~RPtF  451 (468)
T KOG0197|consen  385 SDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGY------RLPRP-------EGCPDEVYELMKSCWHEDPEDRPTF  451 (468)
T ss_pred             cceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccC------cCCCC-------CCCCHHHHHHHHHHhhCCcccCCCH
Confidence            999999999999998 889999999988888877666      45444       7799999999999999999999999


Q ss_pred             HHHh
Q 037274          234 EAQV  237 (245)
Q Consensus       234 ~~~l  237 (245)
                      +.+.
T Consensus       452 ~~L~  455 (468)
T KOG0197|consen  452 ETLR  455 (468)
T ss_pred             HHHH
Confidence            9664

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.5e-43  Score=285.27  Aligned_cols=204  Identities=20%  Similarity=0.305  Sum_probs=178.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ++.....+.+|+-+|+.+.|||++++|+.|++...+|+|.||+++|.|-+++-               .  ++++++.+.
T Consensus        52 s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv---------------~--kG~l~e~ea  114 (786)
T KOG0588|consen   52 SSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLV---------------R--KGPLPEREA  114 (786)
T ss_pred             ccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHH---------------h--hCCCCCHHH
Confidence            34466789999999999999999999999999999999999999999955553               2  578999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCCchh
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ..++.||+.|+.|+|..+|+||||||+|+|++.        ||.+.....+.   +.||.|.|+|||.+.| +...+.++
T Consensus       115 a~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G-~pYdG~~s  193 (786)
T KOG0588|consen  115 AHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSG-RPYDGRPS  193 (786)
T ss_pred             HHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcC-CCCCCCcc
Confidence            999999999999999999999999999999886        88877665544   7899999999999996 55567899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      ||||.|++||.+++|+.||++++....+.++.+...     .++         ..++.+.++|+++|+..||.+|.|.++
T Consensus       194 DVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f-----~MP---------s~Is~eaQdLLr~ml~VDp~~RiT~~e  259 (786)
T KOG0588|consen  194 DVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF-----EMP---------SNISSEAQDLLRRMLDVDPSTRITTEE  259 (786)
T ss_pred             ccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc-----cCC---------CcCCHHHHHHHHHHhccCccccccHHH
Confidence            999999999999999999998777666666554432     222         568999999999999999999999999


Q ss_pred             Hhhcccc
Q 037274          236 QVLQEMW  242 (245)
Q Consensus       236 ~l~~~~f  242 (245)
                      |++|||.
T Consensus       260 I~kHP~l  266 (786)
T KOG0588|consen  260 ILKHPFL  266 (786)
T ss_pred             HhhCchh
Confidence            9999995

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=2.8e-43  Score=280.73  Aligned_cols=207  Identities=21%  Similarity=0.321  Sum_probs=178.4

Q ss_pred             cccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      |-.+.++..+.+.+|+++++.|+||||+.++++|++...+|+|+||+.| +|..++..                 ...++
T Consensus        37 K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~-----------------d~~lp   98 (808)
T KOG0597|consen   37 KSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQ-----------------DGKLP   98 (808)
T ss_pred             hcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHh-----------------ccCCC
Confidence            4456677899999999999999999999999999999999999999997 99776653                 56799


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ++.+..++.+++.||.|||+++|.|||+||.|||+..        ||+++..+...    ...|||.|||||+..+  ..
T Consensus        99 Ee~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e--~p  176 (808)
T KOG0597|consen   99 EEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEE--QP  176 (808)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcC--CC
Confidence            9999999999999999999999999999999999987        77776555543    3467999999999997  77


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      |+..+|+|||||++||++.|++||....-....+.+....       .       .++...+..+.+++..+|..||.+|
T Consensus       177 yd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~-------v-------~~p~~~S~~f~nfl~gLL~kdP~~R  242 (808)
T KOG0597|consen  177 YDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDP-------V-------KPPSTASSSFVNFLQGLLIKDPAQR  242 (808)
T ss_pred             ccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCC-------C-------CCcccccHHHHHHHHHHhhcChhhc
Confidence            9999999999999999999999999855444444433221       1       1125788999999999999999999


Q ss_pred             ccHHHHhhccccc
Q 037274          231 PAAEAQVLQEMWH  243 (245)
Q Consensus       231 pt~~~~l~~~~f~  243 (245)
                      .|..+++.||||.
T Consensus       243 ltW~~Ll~HpF~k  255 (808)
T KOG0597|consen  243 LTWTDLLGHPFWK  255 (808)
T ss_pred             ccHHHHhcChHHh
Confidence            9999999999985

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.1e-42  Score=258.35  Aligned_cols=218  Identities=20%  Similarity=0.270  Sum_probs=175.4

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +...+-..+|++.|++|+|+|+|.+.+.|.....+++|+|||+..-|.+ ++.                ....++...+.
T Consensus        42 ~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~e-Le~----------------~p~G~~~~~vk  104 (396)
T KOG0593|consen   42 PVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHE-LER----------------YPNGVPSELVK  104 (396)
T ss_pred             HHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHH-HHh----------------ccCCCCHHHHH
Confidence            4456678999999999999999999999999999999999999844433 321                24668999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.|+.|+|+++++||||||+|||++.        ||+++......    ....|.+|.|||++.+ ..+|+..+
T Consensus       105 ~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvG-DtqYG~pV  183 (396)
T KOG0593|consen  105 KYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVG-DTQYGKPV  183 (396)
T ss_pred             HHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcc-cCcCCCcc
Confidence            99999999999999999999999999999987        88887766433    2344999999999985 77899999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCC--------------CccCCCCCCCCCCCC---cccccHHHHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK--------------STSLQVAPNEDTTHG---TRTLSKNFWNM  218 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~---~~~~~~~~~~l  218 (245)
                      ||||+||++.||++|.+.|.+.++.+.+..+......              ......+.+......   ....+.-+.++
T Consensus       184 DiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~  263 (396)
T KOG0593|consen  184 DIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDL  263 (396)
T ss_pred             cchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHH
Confidence            9999999999999999999998888877655443322              111122222111111   14456678999


Q ss_pred             HHHhcCCCCCCCccHHHHhhccccc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +..||..||.+|++.++++.|++|.
T Consensus       264 ~k~cL~~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  264 LKKCLKMDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             HHHHhcCCccccccHHHHhcChHHH
Confidence            9999999999999999999999983

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.8e-41  Score=266.82  Aligned_cols=217  Identities=20%  Similarity=0.273  Sum_probs=176.6

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ....-..+||.+|++|+||||+++.+...+.  +.+|+|+||++. +|.-++..                ....|++.++
T Consensus       158 ~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~----------------p~vkft~~qI  220 (560)
T KOG0600|consen  158 GFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSS----------------PGVKFTEPQI  220 (560)
T ss_pred             cchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcC----------------CCcccChHHH
Confidence            3445578999999999999999999998765  689999999997 88665542                2457999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ..++.|++.||+|+|++|++|||||.+|||++.        ||+++......     ....|.+|.|||++.| ...|+.
T Consensus       221 Kc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG-~t~Yg~  299 (560)
T KOG0600|consen  221 KCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLG-ATSYGT  299 (560)
T ss_pred             HHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcC-Cccccc
Confidence            999999999999999999999999999999987        99988555444     2334999999999996 678999


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCC-------------CCC--CCCCcccccHHHHHH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP-------------NED--TTHGTRTLSKNFWNM  218 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~l  218 (245)
                      .+|+||.||||.||++|++.|.+.++.+.+..++..-........+.             +..  .......++....+|
T Consensus       300 aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~L  379 (560)
T KOG0600|consen  300 AVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDL  379 (560)
T ss_pred             ceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHH
Confidence            99999999999999999999999999888887766432211111110             000  001125567888999


Q ss_pred             HHHhcCCCCCCCccHHHHhhccccc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +..+|..||.+|.|+.++|+++||.
T Consensus       380 l~~lL~ldP~kR~tA~~aL~seyF~  404 (560)
T KOG0600|consen  380 LEKLLSLDPDKRGTASSALQSEYFT  404 (560)
T ss_pred             HHHHhccCccccccHHHHhcCcccc
Confidence            9999999999999999999999993

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=3.2e-41  Score=264.68  Aligned_cols=216  Identities=18%  Similarity=0.219  Sum_probs=166.1

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .....+.+|++++++++||||+++++++.+++..++|+|++++ +|.+++..                ....+++..+..
T Consensus        45 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~----------------~~~~~~~~~~~~  107 (288)
T cd07871          45 GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDN----------------CGNLMSMHNVKI  107 (288)
T ss_pred             CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHh----------------cCCCCCHHHHHH
Confidence            3455778999999999999999999999999999999999985 88665542                123478889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||+|||++|++||||||+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.++|
T Consensus       108 ~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~D  186 (288)
T cd07871         108 FMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLG-STEYSTPID  186 (288)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcC-CcccCcHHH
Confidence            9999999999999999999999999999975        7765433221    13445889999999864 345789999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCC------------CC----CCCCCcccccHHHHHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP------------NE----DTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~----~~~~~~~~~~~~~~~li~  220 (245)
                      +|||||++|+|++|+.||.+.+..+....+............+.            +.    .........+.+..++++
T Consensus       187 iwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~  266 (288)
T cd07871         187 MWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLS  266 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHH
Confidence            99999999999999999988766655554443322111100000            00    000011346788999999


Q ss_pred             HhcCCCCCCCccHHHHhhcccc
Q 037274          221 ICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      +||+.||.+|||++++++||||
T Consensus       267 ~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         267 SLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             HhcCcCcccCCCHHHHhcCCCC
Confidence            9999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.7e-41  Score=270.22  Aligned_cols=202  Identities=19%  Similarity=0.238  Sum_probs=168.3

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .....+.+|+.++++++||||+++++++..++..++||||+++|+|.+++..                 ...+++..+..
T Consensus        37 ~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~   99 (323)
T cd05571          37 DEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-----------------ERVFSEDRARF   99 (323)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHHHHH
Confidence            4556788999999999999999999999999999999999999999665542                 34678899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.||+.||+|||+.|++||||||+||+++.        ||++.....    .....+|+.|+|||.+.+  ..++.++|
T Consensus       100 ~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D  177 (323)
T cd05571         100 YGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED--NDYGRAVD  177 (323)
T ss_pred             HHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcC--CCCCcccc
Confidence            9999999999999999999999999999975        777653221    123457999999999987  66899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----  231 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----  231 (245)
                      ||||||++|+|++|..||...+.......+.....              ..+..+++++.+++.+||..||.+||     
T Consensus       178 iwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~--------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~  243 (323)
T cd05571         178 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPE  243 (323)
T ss_pred             CcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC--------------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCC
Confidence            99999999999999999987665544444332210              11245789999999999999999999     


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      ++.++++||||.
T Consensus       244 ~~~~ll~h~~f~  255 (323)
T cd05571         244 DAKEIMEHRFFA  255 (323)
T ss_pred             CHHHHHcCCCcC
Confidence            899999999985

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.7e-41  Score=270.41  Aligned_cols=202  Identities=17%  Similarity=0.148  Sum_probs=169.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.+++.++||||+++++++.+++..++||||+.+|+|.+++..                 ...+++..+..
T Consensus        73 ~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-----------------~~~~~~~~~~~  135 (340)
T PTZ00426         73 KQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR-----------------NKRFPNDVGCF  135 (340)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHHHHH
Confidence            4566788999999999999999999999999999999999999999776642                 34588899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-CCCccccccccCceecCCCCCCCchhhHHH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      ++.|++.||.|||+.|++||||||+|||++.        ||.+...... ....+|+.|+|||.+.+  ..++.++|+||
T Consensus       136 ~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwS  213 (340)
T PTZ00426        136 YAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLN--VGHGKAADWWT  213 (340)
T ss_pred             HHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhC--CCCCccccccc
Confidence            9999999999999999999999999999975        7776544322 23457999999999986  56889999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----cHH
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----AAE  234 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~  234 (245)
                      |||++|+|++|..||...+.....+.+.....              ..+...++.+.+++++||+.||.+|+     +++
T Consensus       214 lGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~--------------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~  279 (340)
T PTZ00426        214 LGIFIYEILVGCPPFYANEPLLIYQKILEGII--------------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQ  279 (340)
T ss_pred             hhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--------------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHH
Confidence            99999999999999998766555555443221              01145678899999999999999995     899


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       280 ~~~~hp~f~  288 (340)
T PTZ00426        280 NVKEHPWFG  288 (340)
T ss_pred             HHHcCCCcC
Confidence            999999985

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-41  Score=266.35  Aligned_cols=202  Identities=21%  Similarity=0.201  Sum_probs=169.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++||||+++++.+.+++..++||||+++|+|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~  105 (291)
T cd05612          43 KQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN-----------------SGRFSNSTGLF  105 (291)
T ss_pred             HHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH-----------------cCCCCHHHHHH
Confidence            4566789999999999999999999999999999999999999999776642                 34578889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCchhhHHH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      ++.|++.||+|||++|++||||||+||+++.        ||++....... ...+++.|+|||.+.+  ..++.++||||
T Consensus       106 ~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwS  183 (291)
T cd05612         106 YASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQS--KGHNKAVDWWA  183 (291)
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHHHHcC--CCCCchhhHHH
Confidence            9999999999999999999999999999976        77665443322 3457899999999986  56889999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----HH
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----AE  234 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~  234 (245)
                      |||++|+|++|..||...+.......+.....              ..+...+..+.+++.+||+.||.+||+     ++
T Consensus       184 lG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~  249 (291)
T cd05612         184 LGILIYEMLVGYPPFFDDNPFGIYEKILAGKL--------------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGAD  249 (291)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc--------------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHH
Confidence            99999999999999998766655555443211              011446889999999999999999995     99


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      +++.||||.
T Consensus       250 ~~l~h~~~~  258 (291)
T cd05612         250 DVKNHRWFK  258 (291)
T ss_pred             HHhcCcccc
Confidence            999999984

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-41  Score=270.12  Aligned_cols=202  Identities=18%  Similarity=0.216  Sum_probs=168.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++||||+++++++..++..+++|||+.+|+|.+++..                 ...+++..+..
T Consensus        60 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~  122 (329)
T PTZ00263         60 KQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK-----------------AGRFPNDVAKF  122 (329)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH-----------------cCCCCHHHHHH
Confidence            3556789999999999999999999999999999999999999999766642                 34578888999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCchhhHHH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      ++.|++.||+|||++|++||||||+||+++.        ||.+....... ...+++.|+|||.+.+  ..++.++||||
T Consensus       123 ~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Diws  200 (329)
T PTZ00263        123 YHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQS--KGHGKAVDWWT  200 (329)
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcC--CCCCCcceeec
Confidence            9999999999999999999999999999975        77665443222 3457999999999987  56789999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----HH
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----AE  234 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~  234 (245)
                      |||++|+|++|..||.+.+.......+.....     .         .+..++..+.++|.+||+.||.+||+     ++
T Consensus       201 lG~il~elltg~~pf~~~~~~~~~~~i~~~~~-----~---------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~  266 (329)
T PTZ00263        201 MGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL-----K---------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVA  266 (329)
T ss_pred             hHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc-----C---------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHH
Confidence            99999999999999988665555544432210     1         11346788999999999999999997     79


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      +++.||||.
T Consensus       267 ~ll~hp~f~  275 (329)
T PTZ00263        267 DVKNHPYFH  275 (329)
T ss_pred             HHhcCCccC
Confidence            999999995

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=2.3e-40  Score=264.62  Aligned_cols=218  Identities=20%  Similarity=0.301  Sum_probs=167.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|++++++++||||+++++++..++..++||||+++++|.+++..                 ...+++..+
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~  105 (331)
T cd06649          43 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-----------------AKRIPEEIL  105 (331)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH-----------------cCCCCHHHH
Confidence            445677899999999999999999999999999999999999999999777642                 245788999


Q ss_pred             HHHHHHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCccccccC--CCCccccccccCceecCCCCCCCchh
Q 037274           87 AIAHKETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ..++.|++.||.|||+. +++|+||||+||+++.        ||++......  ....+++.|+|||.+.+  ..++.++
T Consensus       106 ~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~  183 (331)
T cd06649         106 GKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG--THYSVQS  183 (331)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhHhcC--CCCCchH
Confidence            99999999999999986 6999999999999975        7665433221  23456899999999987  5689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc---CCCC-------------------------------CC
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS---LQVA-------------------------------PN  201 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------------------~~  201 (245)
                      |||||||++|+|++|+.||......+..............   ....                               ..
T Consensus       184 DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (331)
T cd06649         184 DIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNE  263 (331)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhC
Confidence            9999999999999999999765543322211110000000   0000                               00


Q ss_pred             CCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          202 EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       202 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .........+++++.++|.+||+.||++|||+.++++||||.
T Consensus       264 ~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~  305 (331)
T cd06649         264 PPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK  305 (331)
T ss_pred             CCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence            000111234678999999999999999999999999999985

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=5.3e-41  Score=245.02  Aligned_cols=215  Identities=19%  Similarity=0.225  Sum_probs=182.6

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .-...+|+..|+.++|+||+.+.+.|...+.+.+|+||++. +|+.+++.                ....++...+..++
T Consensus        45 ~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vIkd----------------~~i~l~pa~iK~y~  107 (318)
T KOG0659|consen   45 NRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVIKD----------------KNIILSPADIKSYM  107 (318)
T ss_pred             cHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-cHHHHhcc----------------cccccCHHHHHHHH
Confidence            34578999999999999999999999999999999999996 99777763                24568889999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC----CccccccccCceecCCCCCCCchhhHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS----SSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .++++|++|+|++.|+||||||.|+|++.        ||+++.......    ...|-+|.|||++.| ...|+..+|+|
T Consensus       108 ~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfG-sr~Yg~~VDmW  186 (318)
T KOG0659|consen  108 LMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFG-SRQYGTGVDMW  186 (318)
T ss_pred             HHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhcc-chhcCCcchhh
Confidence            99999999999999999999999999985        998887765553    234899999999985 66799999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCC--------------CCCCcccccHHHHHHHHHhcC
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNED--------------TTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~  224 (245)
                      |.||++.|++.|.+-|.+.++.+.+..+++...+....+.+....              ........+.+..+++.+|+.
T Consensus       187 avGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~  266 (318)
T KOG0659|consen  187 AVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLT  266 (318)
T ss_pred             hHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhc
Confidence            999999999999999999999999999988876655443332110              111224456778999999999


Q ss_pred             CCCCCCccHHHHhhccccc
Q 037274          225 PDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .||.+|+|+.++++|+||.
T Consensus       267 ynP~~Rita~qaL~~~yf~  285 (318)
T KOG0659|consen  267 YNPKKRITASQALKHPYFK  285 (318)
T ss_pred             cCchhcccHHHHhcchhhh
Confidence            9999999999999999996

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=7.7e-41  Score=262.12  Aligned_cols=207  Identities=16%  Similarity=0.148  Sum_probs=166.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+.+|+.++++++|+||+++++++.+++..++++||+++|+|.+++..               .....+++..+..+
T Consensus        43 ~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~---------------~~~~~~~~~~~~~~  107 (285)
T cd05631          43 GEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYN---------------MGNPGFDEQRAIFY  107 (285)
T ss_pred             hHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHh---------------hCCCCCCHHHHHHH
Confidence            445678999999999999999999999999999999999999999665531               12345888999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      +.|++.||+|||+.|++||||||+||+++.        ||++......   ....+++.|+|||.+.+  ..++.++|||
T Consensus       108 ~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvw  185 (285)
T cd05631         108 AAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINN--EKYTFSPDWW  185 (285)
T ss_pred             HHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcC--CCCCcccCch
Confidence            999999999999999999999999999975        7776543222   23456899999999987  5689999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----H
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----A  233 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~  233 (245)
                      ||||++|+|++|+.||...................   .       ...+..+++++.+++++||+.||.+||+     +
T Consensus       186 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~  255 (285)
T cd05631         186 GLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED---Q-------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGA  255 (285)
T ss_pred             hHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc---c-------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCH
Confidence            99999999999999998765543333322222100   0       0112557889999999999999999997     8


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      +++++||||.
T Consensus       256 ~~~~~h~~~~  265 (285)
T cd05631         256 AGVKQHPIFK  265 (285)
T ss_pred             HHHhcCHhhc
Confidence            9999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.8e-41  Score=266.00  Aligned_cols=203  Identities=17%  Similarity=0.166  Sum_probs=168.3

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.++++++||||+++++++..++..++||||+++|+|.+++..                 ...+++..+.
T Consensus        34 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----------------~~~~~~~~~~   96 (312)
T cd05585          34 RSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-----------------EGRFDLSRAR   96 (312)
T ss_pred             hhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-----------------cCCCCHHHHH
Confidence            34567788999999999999999999999999999999999999999766642                 3457888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||+.|++||||||+||+++.        ||++.....    .....+|+.|+|||.+.+  ..++.++
T Consensus        97 ~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  174 (312)
T cd05585          97 FYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLG--HGYTKAV  174 (312)
T ss_pred             HHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcC--CCCCCcc
Confidence            99999999999999999999999999999975        776654322    123457999999999987  6689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---c
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---A  232 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t  232 (245)
                      |||||||++|+|++|..||...+.......+....              ...+..+++++.+++.+||+.||.+||   +
T Consensus       175 DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~  240 (312)
T cd05585         175 DWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP--------------LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNG  240 (312)
T ss_pred             ceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC--------------CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence            99999999999999999998866555544433211              011245788999999999999999997   5


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      +.++++||||.
T Consensus       241 ~~e~l~hp~~~  251 (312)
T cd05585         241 AQEIKNHPFFS  251 (312)
T ss_pred             HHHHHcCCCcC
Confidence            79999999986

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.5e-41  Score=267.24  Aligned_cols=204  Identities=18%  Similarity=0.216  Sum_probs=179.2

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCce-eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ-LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ........+|+.++++++|||||.+++.|..++. .+|+|+||+||++.+.+..               .++..++++.+
T Consensus        44 ~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~---------------~k~~~f~E~~i  108 (426)
T KOG0589|consen   44 EPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKE---------------QKGVLFPEERI  108 (426)
T ss_pred             chhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHH---------------HhhccccHHHH
Confidence            3345588999999999999999999999998888 9999999999999776652               23577999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.|+.|||+++|+|||||+.||+++.        ||+++......    +..|||.|++||.+.+  ..|+.+
T Consensus       109 ~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d--~pYn~K  186 (426)
T KOG0589|consen  109 LKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSD--IPYNEK  186 (426)
T ss_pred             HHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCC--CCCCcc
Confidence            999999999999999999999999999999887        88887665543    5678999999999998  889999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|||||||++|||++-+++|.+.+......++.+..      ..+.       +..++.+++.+|..|+..+|..||++.
T Consensus       187 SDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~------~~Pl-------p~~ys~el~~lv~~~l~~~P~~RPsa~  253 (426)
T KOG0589|consen  187 SDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL------YSPL-------PSMYSSELRSLVKSMLRKNPEHRPSAL  253 (426)
T ss_pred             CcchhhcchHHHHHhcccccCccchHHHHHHHhhcc------CCCC-------CccccHHHHHHHHHHhhcCCccCCCHH
Confidence            999999999999999999999988888877776655      1111       277899999999999999999999999


Q ss_pred             HHhhccc
Q 037274          235 AQVLQEM  241 (245)
Q Consensus       235 ~~l~~~~  241 (245)
                      ++|.+|.
T Consensus       254 ~LL~~P~  260 (426)
T KOG0589|consen  254 ELLRRPH  260 (426)
T ss_pred             HHhhChh
Confidence            9999875

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.3e-41  Score=259.28  Aligned_cols=209  Identities=17%  Similarity=0.257  Sum_probs=178.9

Q ss_pred             cccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      +..+++++.-.+.+|+++|..|+||||+.+|..|++.+...+||||..+|.|++++..                 ...++
T Consensus        89 dkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSe-----------------r~~Ls  151 (668)
T KOG0611|consen   89 DKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISE-----------------RGSLS  151 (668)
T ss_pred             hhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHH-----------------hcccc
Confidence            3445777888899999999999999999999999999999999999999999888863                 46799


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +.+...+++||+.|+.|+|.++++|||||.+|||++.        ||++.......   +++|+|.|.+||.+++ ...-
T Consensus       152 ErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG-~PY~  230 (668)
T KOG0611|consen  152 EREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNG-TPYK  230 (668)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCC-CCCC
Confidence            9999999999999999999999999999999999987        88877665444   7889999999999997 4455


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      ++.+|.||||++||-+++|..||++.+......++....-.+               ..-+.....+|+.||..+|++|.
T Consensus       231 GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE---------------P~~PSdA~gLIRwmLmVNP~RRA  295 (668)
T KOG0611|consen  231 GPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE---------------PETPSDASGLIRWMLMVNPERRA  295 (668)
T ss_pred             CCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC---------------CCCCchHHHHHHHHHhcCcccch
Confidence            789999999999999999999999977666555554332111               22345678999999999999999


Q ss_pred             cHHHHhhcccccc
Q 037274          232 AAEAQVLQEMWHF  244 (245)
Q Consensus       232 t~~~~l~~~~f~~  244 (245)
                      |++++..|=|-.|
T Consensus       296 TieDiAsHWWvNw  308 (668)
T KOG0611|consen  296 TIEDIASHWWVNW  308 (668)
T ss_pred             hHHHHhhhheeec
Confidence            9999999977655

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=9.4e-41  Score=250.96  Aligned_cols=212  Identities=18%  Similarity=0.260  Sum_probs=176.9

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      -.+||.+|.+.+|||||.+-....-  -+..|+|||||+. +|.++++..                +.+|...++..++.
T Consensus       122 sLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m----------------~q~F~~~evK~L~~  184 (419)
T KOG0663|consen  122 SLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETM----------------KQPFLPGEVKTLML  184 (419)
T ss_pred             hHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhc----------------cCCCchHHHHHHHH
Confidence            5789999999999999999888753  3569999999997 998877642                36789999999999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhHHH
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      |+++|++|||++.|+||||||+|+|++.        ||+++..+...    ....|.+|.|||++.+ ...|+...|+||
T Consensus       185 QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG-~~tyst~iDMWS  263 (419)
T KOG0663|consen  185 QLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLG-AKTYSTAVDMWS  263 (419)
T ss_pred             HHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcC-CcccCcchhhhh
Confidence            9999999999999999999999999886        99998877663    2334999999999996 677999999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCC-----------------CCCC-cccccHHHHHHHHH
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNED-----------------TTHG-TRTLSKNFWNMVKI  221 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-~~~~~~~~~~li~~  221 (245)
                      +||++.|++++++.|.+....+....+++..........+....                 ...+ ...+++...++++.
T Consensus       264 vGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~  343 (419)
T KOG0663|consen  264 VGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNK  343 (419)
T ss_pred             HHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHH
Confidence            99999999999999999999999999988765543322221111                 0111 12266888999999


Q ss_pred             hcCCCCCCCccHHHHhhccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +|.+||.+|.|+++.|+|+||+
T Consensus       344 llt~dP~kR~tA~~~L~h~~F~  365 (419)
T KOG0663|consen  344 LLTYDPGKRITAEDGLKHEYFR  365 (419)
T ss_pred             HhccCccccccHHHhhcccccc
Confidence            9999999999999999999996

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.7e-40  Score=263.15  Aligned_cols=206  Identities=18%  Similarity=0.207  Sum_probs=176.8

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .++.+.++.|-++|....+|+||++|.+|.+...+||||||++||++-.++..                 ...++++.+.
T Consensus       182 ~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~-----------------~~~L~e~~ar  244 (550)
T KOG0605|consen  182 KNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMR-----------------KDTLTEDWAR  244 (550)
T ss_pred             hhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHh-----------------cCcCchHHHH
Confidence            35778899999999999999999999999999999999999999999777653                 5679999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-------------------------C-----
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-------------------------S-----  129 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-------------------------~-----  129 (245)
                      .++.+++.|+..+|+.|++||||||+|+|++.        ||++.-...                         .     
T Consensus       245 fYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (550)
T KOG0605|consen  245 FYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTP  324 (550)
T ss_pred             HHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccc
Confidence            99999999999999999999999999999987        666421100                         0     


Q ss_pred             -C--------------------CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHh
Q 037274          130 -S--------------------SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLM  188 (245)
Q Consensus       130 -~--------------------~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~  188 (245)
                       .                    ...|||-|+|||++.+  ..|+..+|.||||||+|||+.|.+||.+.+..+....+..
T Consensus       325 ~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~--kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~n  402 (550)
T KOG0605|consen  325 RSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG--KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVN  402 (550)
T ss_pred             cchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc--CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence             0                    2356999999999998  6799999999999999999999999999999999988877


Q ss_pred             cCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc---HHHHhhccccc
Q 037274          189 KQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA---AEAQVLQEMWH  243 (245)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~~~l~~~~f~  243 (245)
                      .......+.          ....+++..+||.+||. ||++|..   ++||-+||||+
T Consensus       403 wr~~l~fP~----------~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~  449 (550)
T KOG0605|consen  403 WRETLKFPE----------EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFK  449 (550)
T ss_pred             HhhhccCCC----------cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccc
Confidence            653322211          15567999999999999 9999995   89999999996

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-40  Score=265.24  Aligned_cols=210  Identities=14%  Similarity=0.167  Sum_probs=171.6

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++||||+++++++..++..++||||+++|+|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-----------------~~~l~~~~~~~  105 (333)
T cd05600          43 NEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN-----------------LGVLSEDHARF  105 (333)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH-----------------cCCCCHHHHHH
Confidence            3566788999999999999999999999999999999999999999777642                 34578889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-CCCCccccccccCceecCCCCCCCchhhHHH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-SSSSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      ++.|++.||.|||+.|++||||||+||+++.        ||++..... .....+++.|+|||.+.+  ..++.++||||
T Consensus       106 ~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvws  183 (333)
T cd05600         106 YMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRG--KGYDFTVDYWS  183 (333)
T ss_pred             HHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChhHhcC--CCCCCccceec
Confidence            9999999999999999999999999999976        776654433 224557999999999987  57899999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      |||++|+|++|..||...+..+....+........   .+..   ......+++++.+++.+||..+|.+||+++++++|
T Consensus       184 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~---~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         184 LGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ---RPVY---DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             chHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc---CCCC---CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            99999999999999988766665554443221111   1100   01114578999999999999999999999999999


Q ss_pred             cccc
Q 037274          240 EMWH  243 (245)
Q Consensus       240 ~~f~  243 (245)
                      |||.
T Consensus       258 ~~~~  261 (333)
T cd05600         258 PFFK  261 (333)
T ss_pred             cccC
Confidence            9986

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-41  Score=261.10  Aligned_cols=204  Identities=22%  Similarity=0.347  Sum_probs=167.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ..+++.+||.+|++|.|||||++++...+  .+.+|||+|||..|.+..                 ....+.-+.+.+.+
T Consensus       151 ~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w-----------------~p~d~~els~~~Ar  213 (576)
T KOG0585|consen  151 PIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKW-----------------CPPDKPELSEQQAR  213 (576)
T ss_pred             cHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCcccc-----------------CCCCcccccHHHHH
Confidence            35789999999999999999999998755  456999999999988821                 11112238899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc---------CCCCccccccccCceecCCC--
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI---------SSSSSITTWAAAPEVVNFGD--  148 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~--  148 (245)
                      .++++++.||.|||.+||+||||||+|+|++.        ||.+.....         .....|||.|+|||++.++.  
T Consensus       214 ~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~  293 (576)
T KOG0585|consen  214 KYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSF  293 (576)
T ss_pred             HHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCc
Confidence            99999999999999999999999999999987        776553311         11457799999999998743  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ...+.+.||||+||+||-++.|+.||.+....+...++......     .+..       ..+.+.++++|.+||..||+
T Consensus       294 ~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~-----fP~~-------pe~~e~~kDli~~lL~KdP~  361 (576)
T KOG0585|consen  294 SYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLE-----FPEN-------PEINEDLKDLIKRLLEKDPE  361 (576)
T ss_pred             cccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCccc-----CCCc-------ccccHHHHHHHHHHhhcChh
Confidence            23468899999999999999999999998888888877654321     1111       35788999999999999999


Q ss_pred             CCccHHHHhhcccc
Q 037274          229 KRPAAEAQVLQEMW  242 (245)
Q Consensus       229 ~Rpt~~~~l~~~~f  242 (245)
                      +|.++.++..|||-
T Consensus       362 ~Ri~l~~ik~Hpwv  375 (576)
T KOG0585|consen  362 QRITLPDIKLHPWV  375 (576)
T ss_pred             heeehhhheeccee
Confidence            99999999999994

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.2e-40  Score=263.74  Aligned_cols=202  Identities=19%  Similarity=0.245  Sum_probs=167.7

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +....+.+|+++++.++||||+++++++...+..++||||+++|+|..++..                 ...+++..++.
T Consensus        37 ~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-----------------~~~~~~~~~~~   99 (323)
T cd05595          37 DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-----------------ERVFTEERARF   99 (323)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHHHHH
Confidence            4556778899999999999999999999999999999999999999665531                 34688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||++|++||||||+||+++.        ||++......    ....+++.|+|||.+.+  ..++.++|
T Consensus       100 ~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D  177 (323)
T cd05595         100 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED--NDYGRAVD  177 (323)
T ss_pred             HHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccC--CCCCchhc
Confidence            9999999999999999999999999999975        6665432111    13457899999999987  56899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----  231 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----  231 (245)
                      ||||||++|+|++|+.||...+.......+.....              ..+..+++++.+++.+||..||.+|+     
T Consensus       178 iwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~  243 (323)
T cd05595         178 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI--------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPS  243 (323)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--------------CCCCCCCHHHHHHHHHHccCCHHHhCCCCCC
Confidence            99999999999999999988666555544432211              11245789999999999999999998     


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      ++.++++|+||.
T Consensus       244 ~~~~~l~h~~~~  255 (323)
T cd05595         244 DAKEVMEHRFFL  255 (323)
T ss_pred             CHHHHHcCCCcC
Confidence            899999999985

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4.2e-40  Score=274.32  Aligned_cols=209  Identities=17%  Similarity=0.205  Sum_probs=172.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .......+.+|+.+++.++||||+++++++..++..++||||+++|+|.+++..          .   ......+++..+
T Consensus       105 ~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~----------~---~~~~~~l~~~~~  171 (478)
T PTZ00267        105 DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQ----------R---LKEHLPFQEYEV  171 (478)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHH----------H---HhccCCCCHHHH
Confidence            344556788899999999999999999999999999999999999999776642          1   112346888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||.|||+.|++||||||+|||++.        ||++......      ....||+.|+|||.+.+  ..++
T Consensus       172 ~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~  249 (478)
T PTZ00267        172 GLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWER--KRYS  249 (478)
T ss_pred             HHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCC--CCCC
Confidence            999999999999999999999999999999886        7776644322      23457999999999986  5689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++|||||||++|+|++|..||...+.......+......             ..+..++.++.++|.+||+.||++||+
T Consensus       250 ~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~-------------~~~~~~s~~~~~li~~~L~~dP~~Rps  316 (478)
T PTZ00267        250 KKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD-------------PFPCPVSSGMKALLDPLLSKNPALRPT  316 (478)
T ss_pred             cHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-------------CCCccCCHHHHHHHHHHhccChhhCcC
Confidence            9999999999999999999999886665555544332210             011457889999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      +++++.|+|++
T Consensus       317 ~~~~l~~~~~~  327 (478)
T PTZ00267        317 TQQLLHTEFLK  327 (478)
T ss_pred             HHHHHhCHHHH
Confidence            99999999875

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.5e-40  Score=254.04  Aligned_cols=207  Identities=19%  Similarity=0.236  Sum_probs=172.8

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+.....+.|-+||+.++||.+..+|+.|+++...|++||||+||+|..+.+               .+....+++..+.
T Consensus       118 rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~Lrq---------------kQp~~~fse~~aR  182 (459)
T KOG0610|consen  118 RKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQ---------------KQPGKRFSESAAR  182 (459)
T ss_pred             hhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHh---------------hCCCCccchhhHH
Confidence            4566778889999999999999999999999999999999999999966554               3446789999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccc----------------------------------
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTR----------------------------------  125 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~----------------------------------  125 (245)
                      .++..|+.||+|||..|||.|||||+|||+..        |.++..                                  
T Consensus       183 FYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~  262 (459)
T KOG0610|consen  183 FYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRC  262 (459)
T ss_pred             HHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccch
Confidence            99999999999999999999999999999765        111000                                  


Q ss_pred             --c------------------------ccCCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCc
Q 037274          126 --N------------------------WISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQD  179 (245)
Q Consensus       126 --~------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~  179 (245)
                        .                        ......+||-.|+|||++.+  ...+.++|-|+||+++|||++|..||.+.+.
T Consensus       263 ~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G--~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~  340 (459)
T KOG0610|consen  263 LSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG--EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN  340 (459)
T ss_pred             hccccccccccccccccchhhhcCCCCccccccccccccccceeeec--CCCCchhhHHHHHHHHHHHHhCCCCcCCCCc
Confidence              0                        00013455889999999998  7789999999999999999999999999998


Q ss_pred             hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc----HHHHhhccccc
Q 037274          180 LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA----AEAQVLQEMWH  243 (245)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~~l~~~~f~  243 (245)
                      .+....++......     +..       ...+..+++||+++|..||.+|..    ++||-+||||.
T Consensus       341 ~~Tl~NIv~~~l~F-----p~~-------~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~  396 (459)
T KOG0610|consen  341 KETLRNIVGQPLKF-----PEE-------PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFE  396 (459)
T ss_pred             hhhHHHHhcCCCcC-----CCC-------CcchhHHHHHHHHHhccChhhhhccccchHHhhcCcccc
Confidence            88877766543211     111       356789999999999999999998    99999999995

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=8.2e-40  Score=261.08  Aligned_cols=221  Identities=24%  Similarity=0.362  Sum_probs=162.3

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+++++.++||||+++++++..++..++|+||+++|+|.+++..               .....+++..++
T Consensus        40 ~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---------------~~~~~l~~~~~~  104 (327)
T cd08227          40 NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT---------------HFMDGMSELAIA  104 (327)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHh---------------hccCCCCHHHHH
Confidence            34556788899999999999999999999999999999999999999777642               112357889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc-----------cCCCCccccccccCceecCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW-----------ISSSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~  148 (245)
                      .++.|++.||.|||++|++|+||||+||+++.        |+......           ......++..|+|||.+.++.
T Consensus       105 ~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  184 (327)
T cd08227         105 YILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNL  184 (327)
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhccc
Confidence            99999999999999999999999999999975        22111100           011223467799999997533


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCC-ccCC-------------------C--------C-
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKS-TSLQ-------------------V--------A-  199 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~-------------------~--------~-  199 (245)
                      ..++.++|||||||++|++++|+.||................... ....                   .        . 
T Consensus       185 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (327)
T cd08227         185 QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPR  264 (327)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcC
Confidence            458899999999999999999999998644333222211111000 0000                   0        0 


Q ss_pred             ---CCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          200 ---PNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       200 ---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                         ...........+++.+.+++.+||+.||++|||++++++||||+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~  311 (327)
T cd08227         265 PSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK  311 (327)
T ss_pred             ccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhh
Confidence               00000011234577899999999999999999999999999995

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2e-40  Score=260.05  Aligned_cols=215  Identities=15%  Similarity=0.186  Sum_probs=164.4

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.++++++||||+++++++..++..++||||++++++..+..                 ....+++..+..
T Consensus        42 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----------------~~~~~~~~~~~~  104 (287)
T cd07848          42 EVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEE-----------------MPNGVPPEKVRS  104 (287)
T ss_pred             cchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHh-----------------cCCCCCHHHHHH
Confidence            456778899999999999999999999999999999999999877743322                 134588899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.||.|||+.|++|+||||+||+++.        ||.+.......     ...+++.|+|||.+.+  ..++.++
T Consensus       105 ~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~  182 (287)
T cd07848         105 YIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLG--APYGKAV  182 (287)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcC--CCCCCch
Confidence            9999999999999999999999999999875        77665433211     2346889999999986  5588999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCC--------------ccCCCCCCC----CCCCCcccccHHHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKS--------------TSLQVAPNE----DTTHGTRTLSKNFWN  217 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~----~~~~~~~~~~~~~~~  217 (245)
                      |+|||||++|+|++|+.||...+..+....+.......              .....+...    ........++.++.+
T Consensus       183 DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  262 (287)
T cd07848         183 DMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLD  262 (287)
T ss_pred             hHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHH
Confidence            99999999999999999998765544332222111000              000000000    000111346788999


Q ss_pred             HHHHhcCCCCCCCccHHHHhhcccc
Q 037274          218 MVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      ++.+||+.||++|||++++++||||
T Consensus       263 ll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         263 LMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             HHHHHccCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2.3e-40  Score=264.14  Aligned_cols=203  Identities=20%  Similarity=0.259  Sum_probs=167.2

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+....+.+|+++++.++||||+++++.+..++..++||||+++|+|.+.+..                 ...+++..+.
T Consensus        36 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----------------~~~l~~~~~~   98 (328)
T cd05593          36 KDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR-----------------ERVFSEDRTR   98 (328)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh-----------------cCCCCHHHHH
Confidence            34567788999999999999999999999999999999999999999655531                 3458899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.||+.||+|||++|++||||||+|||++.        ||++.....    .....+++.|+|||.+.+  ..++.++
T Consensus        99 ~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  176 (328)
T cd05593          99 FYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLED--NDYGRAV  176 (328)
T ss_pred             HHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcC--CCCCccC
Confidence            99999999999999999999999999999975        776653221    113457899999999986  5689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc----
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP----  231 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----  231 (245)
                      |||||||++|+|++|..||...+.......+....       .       ..+..+++++.+++++||+.||.+|+    
T Consensus       177 DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~-------~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~  242 (328)
T cd05593         177 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED-------I-------KFPRTLSADAKSLLSGLLIKDPNKRLGGGP  242 (328)
T ss_pred             CccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC-------c-------cCCCCCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence            99999999999999999998765544443332111       0       11255789999999999999999997    


Q ss_pred             -cHHHHhhccccc
Q 037274          232 -AAEAQVLQEMWH  243 (245)
Q Consensus       232 -t~~~~l~~~~f~  243 (245)
                       ++.++++|+||.
T Consensus       243 ~~~~~il~h~~~~  255 (328)
T cd05593         243 DDAKEIMRHSFFT  255 (328)
T ss_pred             CCHHHHhcCCCcC
Confidence             899999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-40  Score=262.94  Aligned_cols=210  Identities=21%  Similarity=0.310  Sum_probs=178.9

Q ss_pred             ccccccHH-HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            2 IDINHQAE-EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         2 ~~~~~~~~-~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      |++.+-.+ ....+.+|++.|+.++|||||++|+...+...+|+|+|.-++|+|.++|-.                ....
T Consensus        51 iDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImK----------------He~G  114 (864)
T KOG4717|consen   51 IDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMK----------------HEEG  114 (864)
T ss_pred             ecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHh----------------hhcc
Confidence            34443333 556799999999999999999999999999999999999999999888752                2466


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccCC---CCccccccccCceecCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWISS---SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~  148 (245)
                      +.+.....++.||+.|+.|+|+.++|||||||+|+.+..         ||++.....+.   +.+|...|.|||.+.+  
T Consensus       115 l~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLG--  192 (864)
T KOG4717|consen  115 LNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLG--  192 (864)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhc--
Confidence            899999999999999999999999999999999998765         77776655443   6788999999999997  


Q ss_pred             CCC-CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYY-SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~-~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..| -+++||||||++||.+++|.+||...++.+.+..++.--              ...+..++.+++++|..||..||
T Consensus       193 DsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK--------------YtvPshvS~eCrdLI~sMLvRdP  258 (864)
T KOG4717|consen  193 DSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK--------------YTVPSHVSKECRDLIQSMLVRDP  258 (864)
T ss_pred             CccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc--------------ccCchhhhHHHHHHHHHHHhcCc
Confidence            445 478999999999999999999999988888776655322              12237789999999999999999


Q ss_pred             CCCccHHHHhhccccc
Q 037274          228 AKRPAAEAQVLQEMWH  243 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~f~  243 (245)
                      .+|.+.++|..++|.+
T Consensus       259 kkRAslEeI~s~~Wlq  274 (864)
T KOG4717|consen  259 KKRASLEEIVSTSWLQ  274 (864)
T ss_pred             hhhccHHHHhcccccc
Confidence            9999999999999964

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.5e-40  Score=276.30  Aligned_cols=215  Identities=14%  Similarity=0.244  Sum_probs=181.4

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+.+..++|++|+.++..|+|||||+++|.|..++..|+|+||+..|+|.+|+.....-......-   ...+.+++..
T Consensus       527 ~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g---~~~~~~L~~~  603 (774)
T KOG1026|consen  527 KAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASG---QDTPPPLSTS  603 (774)
T ss_pred             cccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCC---CCCCCCCCHH
Confidence            3455588999999999999999999999999999999999999999999999998654332221000   0014568899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCcc------ccccccCceecCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSI------TTWAAAPEVVNFGDDY  150 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~------~~~y~aPE~~~~~~~~  150 (245)
                      +.+.|+.||+.|+.||-++++|||||-++|+|++.        ||+++.....+....      ..+|||||.+..  ..
T Consensus       604 q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly--~k  681 (774)
T KOG1026|consen  604 QFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY--GK  681 (774)
T ss_pred             HHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc--Cc
Confidence            99999999999999999999999999999999887        999887766654332      689999999998  56


Q ss_pred             CCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      ++.++||||+||+|||+++ |+.||.+..+.+.++.+.....      ...+       ..+|.++++++..||+.+|.+
T Consensus       682 FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l------L~~P-------e~CP~~vY~LM~~CW~~~P~~  748 (774)
T KOG1026|consen  682 FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL------LSCP-------ENCPTEVYSLMLECWNENPKR  748 (774)
T ss_pred             ccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc------ccCC-------CCCCHHHHHHHHHHhhcCccc
Confidence            9999999999999999987 9999999999998888766552      1122       779999999999999999999


Q ss_pred             CccHHHHh
Q 037274          230 RPAAEAQV  237 (245)
Q Consensus       230 Rpt~~~~l  237 (245)
                      ||++.+|-
T Consensus       749 RPsF~eI~  756 (774)
T KOG1026|consen  749 RPSFKEIH  756 (774)
T ss_pred             CCCHHHHH
Confidence            99999873

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.9e-40  Score=263.16  Aligned_cols=202  Identities=16%  Similarity=0.159  Sum_probs=166.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .....+.+|+.+++.++||||+++++.+..++..+++|||+.+++|.+++..                 ...+.+..+..
T Consensus        42 ~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~  104 (323)
T cd05584          42 KDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLER-----------------EGIFMEDTACF  104 (323)
T ss_pred             hhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHH-----------------cCCCCHHHHHH
Confidence            3455678999999999999999999999999999999999999999766642                 34577888888


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||++|++||||||+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.++|
T Consensus       105 ~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D  182 (323)
T cd05584         105 YLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMR--SGHGKAVD  182 (323)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccC--CCCCCcce
Confidence            9999999999999999999999999999975        776543221    113457899999999986  56789999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----  231 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----  231 (245)
                      |||||+++|+|++|+.||...+.......+.....     .         .+..+++.+.++|.+||+.+|++||     
T Consensus       183 iwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~-----~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  248 (323)
T cd05584         183 WWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL-----N---------LPPYLTPEARDLLKKLLKRNPSSRLGAGPG  248 (323)
T ss_pred             ecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-----C---------CCCCCCHHHHHHHHHHcccCHhHcCCCCCC
Confidence            99999999999999999988766555544432210     1         1145688999999999999999999     


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      +++++++||||.
T Consensus       249 ~~~~l~~h~~~~  260 (323)
T cd05584         249 DAAEVQSHPFFR  260 (323)
T ss_pred             CHHHHhcCCCcC
Confidence            899999999985

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=6.5e-40  Score=256.26  Aligned_cols=209  Identities=13%  Similarity=0.127  Sum_probs=166.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+..|++++++++|+||+++.+++..++..+++|||+++|+|..++...             ......+++..+..+
T Consensus        36 ~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~-------------~~~~~~l~~~~~~~~  102 (280)
T cd05608          36 GYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNV-------------DEENPGFPEPRACFY  102 (280)
T ss_pred             HHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhc-------------cccCCCCCHHHHHHH
Confidence            4567788999999999999999999999999999999999999997655310             112356889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||+.|++|+||||+||+++.        ||.+.......    ...+++.|+|||.+.+  ..++.++|+
T Consensus       103 ~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv  180 (280)
T cd05608         103 TAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQG--EEYDFSVDY  180 (280)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcC--CCCCccccH
Confidence            999999999999999999999999999875        67654332221    2356899999999987  568899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----c
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----A  232 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t  232 (245)
                      ||||+++|+|++|+.||...................   .       ...+..+++.+.+++.+||+.||.+||     +
T Consensus       181 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~  250 (280)
T cd05608         181 FALGVTLYEMIAARGPFRARGEKVENKELKQRILND---S-------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGN  250 (280)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc---C-------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCC
Confidence            999999999999999998754433222222221110   0       011245789999999999999999999     8


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       251 ~~~~l~h~~~~  261 (280)
T cd05608         251 CDGLRTHPLFR  261 (280)
T ss_pred             HHHHhcChhhh
Confidence            89999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-42  Score=268.84  Aligned_cols=210  Identities=27%  Similarity=0.423  Sum_probs=176.5

Q ss_pred             CccccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            1 VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         1 ~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      ||+++..++..+++++|+.+|.+++++||.++|+.+..+..++++||||.||++.++++.                 ...
T Consensus        45 ii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~-----------------~~~  107 (467)
T KOG0201|consen   45 IIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKS-----------------GNI  107 (467)
T ss_pred             EechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhcc-----------------CCC
Confidence            578888899999999999999999999999999999999999999999999999888763                 334


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~  148 (245)
                      +.+.++..++++++.|+.|||..+.+|||||+.||+++.        ||.+.....    ..+..|||.|||||++.+  
T Consensus       108 ~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~--  185 (467)
T KOG0201|consen  108 LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQ--  185 (467)
T ss_pred             CccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhcc--
Confidence            478888899999999999999999999999999999987        555433322    246788999999999996  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ..|+.++||||||++.+||++|.+|+........+   + .+.     ...+|...    ..+++.+++||+.||..||+
T Consensus       186 ~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl---f-lIp-----k~~PP~L~----~~~S~~~kEFV~~CL~k~P~  252 (467)
T KOG0201|consen  186 SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL---F-LIP-----KSAPPRLD----GDFSPPFKEFVEACLDKNPE  252 (467)
T ss_pred             ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE---E-ecc-----CCCCCccc----cccCHHHHHHHHHHhhcCcc
Confidence            77999999999999999999999999985552211   1 110     12222222    47889999999999999999


Q ss_pred             CCccHHHHhhcccc
Q 037274          229 KRPAAEAQVLQEMW  242 (245)
Q Consensus       229 ~Rpt~~~~l~~~~f  242 (245)
                      .||++.++++|+|-
T Consensus       253 ~RpsA~~LLKh~FI  266 (467)
T KOG0201|consen  253 FRPSAKELLKHKFI  266 (467)
T ss_pred             cCcCHHHHhhhHHH
Confidence            99999999999873

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=5.7e-40  Score=259.37  Aligned_cols=216  Identities=19%  Similarity=0.250  Sum_probs=160.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+.+|+.+++.++||||+++++++.+++..++||||+. ++|.+++..                ....+++..+..+
T Consensus        46 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----------------~~~~~~~~~~~~~  108 (303)
T cd07869          46 TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDK----------------HPGGLHPENVKLF  108 (303)
T ss_pred             cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHh----------------CCCCCCHHHHHHH
Confidence            34567889999999999999999999999999999999997 477554431                1345788899999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||+|||+.|++||||||+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.++|+
T Consensus       109 ~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di  187 (303)
T cd07869         109 LFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLG-STEYSTCLDM  187 (303)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcC-CCCCCcHHHH
Confidence            999999999999999999999999999876        6665432211    23445889999999864 3457889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCch-HHHHHHHhcCCCCccCC---------CCCCCC---------CCCCcccccHHHHHH
Q 037274          158 WLIGITALQFPCGGLPVSRRQDL-DIMTKMLMKQPKSTSLQ---------VAPNED---------TTHGTRTLSKNFWNM  218 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~---------~~~~~~~~~~~~~~l  218 (245)
                      |||||++|+|++|..||.+..+. .................         ..+...         ........+..+.++
T Consensus       188 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  267 (303)
T cd07869         188 WGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDL  267 (303)
T ss_pred             HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHH
Confidence            99999999999999999875442 22222222111000000         000000         000112345788999


Q ss_pred             HHHhcCCCCCCCccHHHHhhccccc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +++||+.||.+|||+.++++||||.
T Consensus       268 i~~mL~~dp~~R~s~~~~l~h~~f~  292 (303)
T cd07869         268 ASKLLQCFPKNRLSAQAALSHEYFS  292 (303)
T ss_pred             HHHHhccCchhccCHHHHhcCcccc
Confidence            9999999999999999999999996

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-40  Score=251.77  Aligned_cols=218  Identities=18%  Similarity=0.246  Sum_probs=174.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe-----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS-----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ..-..+...+|+.+|+.++|+||+.+++.+..     -+..|+|+|+++. +|...++.                 +..+
T Consensus        61 ~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMet-DL~~iik~-----------------~~~L  122 (359)
T KOG0660|consen   61 NQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMET-DLHQIIKS-----------------QQDL  122 (359)
T ss_pred             chHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhh-HHHHHHHc-----------------Cccc
Confidence            44577889999999999999999999999855     2458999999965 88777763                 3448


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFG  147 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~  147 (245)
                      +..-+..++.|++.||.|+|+.+++||||||+|++++.        ||+++.....      .....|.+|.|||.+.. 
T Consensus       123 ~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~-  201 (359)
T KOG0660|consen  123 TDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLN-  201 (359)
T ss_pred             cHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhc-
Confidence            88999999999999999999999999999999999986        9998877431      23445999999999864 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------CCC--CCCCCCCCccc
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------QVA--PNEDTTHGTRT  210 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~--~~~~~~~~~~~  210 (245)
                      ...|+...||||+||++.||++|++.|.+.+....++.+..........               +.+  ++..-......
T Consensus       202 ~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~  281 (359)
T KOG0660|consen  202 SSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPN  281 (359)
T ss_pred             cccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCC
Confidence            5679999999999999999999999999988777776665544332111               010  11110111246


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .++...+++++||..||.+|+|+++.|.|||+.
T Consensus       282 a~p~AidLlekmL~fdP~kRita~eAL~hPYl~  314 (359)
T KOG0660|consen  282 ANPLAIDLLEKMLVFDPKKRITAEEALAHPYLA  314 (359)
T ss_pred             CCHHHHHHHHHHhccCccccCCHHHHhcChhhh
Confidence            788999999999999999999999999999974

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1.5e-39  Score=259.89  Aligned_cols=218  Identities=20%  Similarity=0.294  Sum_probs=165.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|++++++++|+||+++++++.+++..++||||+++++|.+++..                 ...+++..+
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~  105 (333)
T cd06650          43 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-----------------AGRIPEQIL  105 (333)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHH-----------------cCCCCHHHH
Confidence            445667899999999999999999999999999999999999999999777642                 235788899


Q ss_pred             HHHHHHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCccccccC--CCCccccccccCceecCCCCCCCchh
Q 037274           87 AIAHKETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ..++.|++.||.|||+. +++|+||||+||+++.        ||++......  ....+++.|+|||.+.+  ..++.++
T Consensus       106 ~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~  183 (333)
T cd06650         106 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG--THYSVQS  183 (333)
T ss_pred             HHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcC--CCCCcHH
Confidence            99999999999999985 7999999999999975        6665433221  23456889999999986  5688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC--------------------------------CCCC
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA--------------------------------PNED  203 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~  203 (245)
                      |+|||||++|++++|+.||.........................                                ....
T Consensus       184 DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (333)
T cd06650         184 DIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPP  263 (333)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCC
Confidence            99999999999999999998654332221110000000000000                                0000


Q ss_pred             CCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          204 TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       204 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ........+.++.+++.+||+.||++|||+++++.|+||+
T Consensus       264 ~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~  303 (333)
T cd06650         264 PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIK  303 (333)
T ss_pred             ccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHh
Confidence            0011124678899999999999999999999999999985

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-39  Score=260.48  Aligned_cols=204  Identities=20%  Similarity=0.262  Sum_probs=176.1

Q ss_pred             HHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+.+|+++|++|+ |||||.+++.+++....++|||++.||.|.+.+..               .   .+++.....
T Consensus        78 ~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~---------------~---~~sE~da~~  139 (382)
T KOG0032|consen   78 DREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVK---------------K---HYSERDAAG  139 (382)
T ss_pred             cHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHH---------------c---cCCHHHHHH
Confidence            5689999999999998 99999999999999999999999999999665542               1   389999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc------------ccCcccccc---CCCCccccccccCceecCCCCCCCc
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWI---SSSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ++.|++.+++|||+.|++||||||+|+|+..            ||++.....   ....+||+.|+|||.+..  ..++.
T Consensus       140 ~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~--~~y~~  217 (382)
T KOG0032|consen  140 IIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGG--RPYGD  217 (382)
T ss_pred             HHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcC--CCCCc
Confidence            9999999999999999999999999999865            888876665   225677999999999987  77999


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      .+||||+|+++|.|++|.+||.+.+.......+.....   .+.       ......++..+.++|+.|+..||.+|+|+
T Consensus       218 ~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~---~f~-------~~~w~~is~~akd~i~~ll~~dp~~R~ta  287 (382)
T KOG0032|consen  218 EVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF---DFT-------SEPWDDISESAKDFIRKLLEFDPRKRLTA  287 (382)
T ss_pred             ccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC---CCC-------CCCccccCHHHHHHHHHhcccCcccCCCH
Confidence            99999999999999999999999887777665554432   111       11126679999999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      .++++|||..
T Consensus       288 ~~~L~HpWi~  297 (382)
T KOG0032|consen  288 AQALQHPWIK  297 (382)
T ss_pred             HHHhcCcccc
Confidence            9999999954

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.3e-39  Score=261.09  Aligned_cols=217  Identities=18%  Similarity=0.275  Sum_probs=160.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc-----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQR-----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      .....+.+|++++++++||||+++++++...+     ..++||||+. ++|.+++..                 ...+++
T Consensus        41 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~-----------------~~~~~~  102 (338)
T cd07859          41 SDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKA-----------------NDDLTP  102 (338)
T ss_pred             hhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHh-----------------cccCCH
Confidence            44567889999999999999999999875432     4799999996 588665542                 245889


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------CCCccccccccCceecCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------SSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~  148 (245)
                      ..+..++.|++.||.|||+.|++||||||+||+++.        ||.+......       ....+++.|+|||.+.+..
T Consensus       103 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  182 (338)
T cd07859         103 EHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF  182 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccc
Confidence            999999999999999999999999999999999976        7766533211       1235689999999986533


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc-----------------CCCCCCCCCCCCcccc
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS-----------------LQVAPNEDTTHGTRTL  211 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~  211 (245)
                      ..++.++|||||||++|+|++|+.||.+.+.......+.........                 .....+..........
T Consensus       183 ~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (338)
T cd07859         183 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNA  262 (338)
T ss_pred             cccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCC
Confidence            56889999999999999999999999876543332221111100000                 0000000000011346


Q ss_pred             cHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          212 SKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       212 ~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++.+.+++.+||+.||++|||++++++||||.
T Consensus       263 ~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~  294 (338)
T cd07859         263 DPLALRLLERLLAFDPKDRPTAEEALADPYFK  294 (338)
T ss_pred             ChHHHHHHHHHcCcCcccCCCHHHHhcCchhh
Confidence            78899999999999999999999999999995

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=9.5e-40  Score=264.41  Aligned_cols=206  Identities=17%  Similarity=0.244  Sum_probs=167.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+++.++||||+++++++.+++..++||||+++|+|.+++.                  ...+++..+..+
T Consensus        86 ~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~------------------~~~l~~~~~~~~  147 (370)
T cd05596          86 DSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMS------------------NYDIPEKWARFY  147 (370)
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHH------------------hcCCCHHHHHHH
Confidence            44567889999999999999999999999999999999999999977664                  234778888899


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----CCCccccccccCceecCC--CCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----SSSSITTWAAAPEVVNFG--DDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~~--~~~~~~~  154 (245)
                      +.|++.||+|||+.|++||||||+|||++.        ||.+......     ....||+.|+|||.+.+.  ...++.+
T Consensus       148 ~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  227 (370)
T cd05596         148 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE  227 (370)
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCc
Confidence            999999999999999999999999999975        7766543221     234579999999998752  1347899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC--Ccc
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK--RPA  232 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rpt  232 (245)
                      +|+|||||++|+|++|+.||.+.+.......+......   ...+       ....++.++.++|.+||+.+|.+  |++
T Consensus       228 ~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~---~~~~-------~~~~~s~~~~~li~~~L~~~p~r~~R~s  297 (370)
T cd05596         228 CDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS---LTFP-------DDIEISKQAKDLICAFLTDREVRLGRNG  297 (370)
T ss_pred             eeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc---CCCC-------CcCCCCHHHHHHHHHHccChhhccCCCC
Confidence            99999999999999999999987766555555432210   0111       11357899999999999999988  999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||+
T Consensus       298 ~~ell~h~~~~  308 (370)
T cd05596         298 VDEIKSHPFFK  308 (370)
T ss_pred             HHHHhcCcccC
Confidence            99999999985

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.9e-39  Score=262.34  Aligned_cols=205  Identities=15%  Similarity=0.157  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +....+.+|+.++++++|+||+++++.+.+++..++||||+++|+|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~l~~~~~~~  105 (363)
T cd05628          43 EQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK-----------------KDTLTEEETQF  105 (363)
T ss_pred             hHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh-----------------cCCCCHHHHHH
Confidence            4456788999999999999999999999999999999999999999776642                 34688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------------------------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------------------------------  129 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------------------------------  129 (245)
                      ++.|++.||.|||++|++||||||+|||++.        ||++......                               
T Consensus       106 ~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (363)
T cd05628         106 YIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETW  185 (363)
T ss_pred             HHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchh
Confidence            9999999999999999999999999999975        7766532210                               


Q ss_pred             --------CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCC
Q 037274          130 --------SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPN  201 (245)
Q Consensus       130 --------~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (245)
                              ....||+.|+|||.+.+  ..++.++|+|||||++|+|++|+.||.+.+..+....+...... .  ..+. 
T Consensus       186 ~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~--~~p~-  259 (363)
T cd05628         186 KRNRRQLAFSTVGTPDYIAPEVFMQ--TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKET-L--IFPP-  259 (363)
T ss_pred             hhccccccccccCCccccCHHHHcC--CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCc-c--cCCC-
Confidence                    12357999999999987  56889999999999999999999999987766665555432110 0  1111 


Q ss_pred             CCCCCCcccccHHHHHHHHHhcCCCCC---CCccHHHHhhccccc
Q 037274          202 EDTTHGTRTLSKNFWNMVKICLAPDPA---KRPAAEAQVLQEMWH  243 (245)
Q Consensus       202 ~~~~~~~~~~~~~~~~li~~~l~~~p~---~Rpt~~~~l~~~~f~  243 (245)
                            ...+++++.+++.+|+. +|.   .||+++++++||||.
T Consensus       260 ------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~  297 (363)
T cd05628         260 ------EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFE  297 (363)
T ss_pred             ------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCC
Confidence                  13467899999998664 344   468999999999995

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=8.6e-40  Score=260.05  Aligned_cols=202  Identities=17%  Similarity=0.252  Sum_probs=167.3

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+.+..|+.+++.+ +||||+++++++...+..++||||+++|+|.+++..                 ...+++..+.
T Consensus        37 ~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~-----------------~~~l~~~~~~   99 (320)
T cd05590          37 DDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK-----------------SRRFDEARAR   99 (320)
T ss_pred             cHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHH-----------------cCCCCHHHHH
Confidence            4566778899988876 699999999999999999999999999999666542                 3458889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||+.|++||||||+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.++
T Consensus       100 ~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  177 (320)
T cd05590         100 FYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQE--MLYGPSV  177 (320)
T ss_pred             HHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcC--CCCCCcc
Confidence            99999999999999999999999999999975        776553221    123457999999999986  6688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH--
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA--  233 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~--  233 (245)
                      |+|||||++|+|++|+.||...+.......+.....              ..+..++.++.+++++||+.||.+||++  
T Consensus       178 DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~--------------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~  243 (320)
T cd05590         178 DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV--------------VYPTWLSQDAVDILKAFMTKNPTMRLGSLT  243 (320)
T ss_pred             chhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC--------------CCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            999999999999999999998776665555433211              0114578899999999999999999998  


Q ss_pred             ----HHHhhccccc
Q 037274          234 ----EAQVLQEMWH  243 (245)
Q Consensus       234 ----~~~l~~~~f~  243 (245)
                          +++++||||.
T Consensus       244 ~~~~~~~~~h~~f~  257 (320)
T cd05590         244 LGGEEAILRHPFFK  257 (320)
T ss_pred             CCCHHHHHcCCCcC
Confidence                8999999985

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.1e-40  Score=265.12  Aligned_cols=205  Identities=18%  Similarity=0.205  Sum_probs=166.6

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.+++.++||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-----------------~~~l~~~~~~~  105 (364)
T cd05599          43 EQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK-----------------KDTFTEEETRF  105 (364)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH-----------------cCCCCHHHHHH
Confidence            4556788999999999999999999999999999999999999999776642                 34588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------------------------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------------------------------  129 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------------------------------  129 (245)
                      ++.|++.||.|||+.|++||||||+|||++.        ||++......                               
T Consensus       106 ~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (364)
T cd05599         106 YIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKA  185 (364)
T ss_pred             HHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999875        6655432111                               


Q ss_pred             -----------CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCC
Q 037274          130 -----------SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQV  198 (245)
Q Consensus       130 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  198 (245)
                                 ....||+.|+|||++..  ..++.++|||||||++|+|++|..||...+.......+.....   ....
T Consensus       186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~---~~~~  260 (364)
T cd05599         186 ETWKRNRRALAYSTVGTPDYIAPEVFLQ--TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKE---TLQF  260 (364)
T ss_pred             cchhhcccccccccccCccccCHHHHcC--CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCC---ccCC
Confidence                       02357999999999876  5689999999999999999999999998766555544432211   0111


Q ss_pred             CCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc---HHHHhhccccc
Q 037274          199 APNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA---AEAQVLQEMWH  243 (245)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~~~l~~~~f~  243 (245)
                      +.       ...+++++.++|.+|+. +|.+|++   ++++++||||.
T Consensus       261 ~~-------~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~  300 (364)
T cd05599         261 PD-------EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFK  300 (364)
T ss_pred             CC-------CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcC
Confidence            11       13578899999999997 8999998   99999999985

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-40  Score=239.60  Aligned_cols=203  Identities=18%  Similarity=0.192  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +...++.+|+++...|+||||+++|++|.++...|+++||...|++...+.               ......+++...+.
T Consensus        64 ~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~---------------~~~~~~f~e~~~a~  128 (281)
T KOG0580|consen   64 QVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQ---------------EGRMKRFDEQRAAT  128 (281)
T ss_pred             cchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHH---------------hcccccccccchhH
Confidence            355788999999999999999999999999999999999999999966554               22356789999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccc--ccCCCCccccccccCceecCCCCCCCchhhHH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRN--WISSSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      ++.|++.||.|+|..+++||||||+|+|++.        ||-+.-.  ....+.+||.-|.|||+..+  ...+..+|+|
T Consensus       129 Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~--~~hd~~Vd~w  206 (281)
T KOG0580|consen  129 YIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEG--RGHDKFVDLW  206 (281)
T ss_pred             HHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCC--CCccchhhHH
Confidence            9999999999999999999999999999886        6544322  22336788999999999998  7789999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      ++|++.||++.|.+||......+.++++.....              ..+..++.+..++|.+|+..+|.+|.+..+++.
T Consensus       207 ~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~--------------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  207 SLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL--------------KFPSTISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             HHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc--------------cCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence            999999999999999999887777777654431              112668899999999999999999999999999


Q ss_pred             cccc
Q 037274          239 QEMW  242 (245)
Q Consensus       239 ~~~f  242 (245)
                      |||-
T Consensus       273 hpwI  276 (281)
T KOG0580|consen  273 HPWI  276 (281)
T ss_pred             hHHH
Confidence            9994

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-39  Score=254.70  Aligned_cols=207  Identities=16%  Similarity=0.144  Sum_probs=166.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+.+|+.+++.++|+||+++++.+.+++..+++|||+++|+|.+++.               ......+++..+..+
T Consensus        43 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---------------~~~~~~~~~~~~~~~  107 (285)
T cd05605          43 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY---------------NMGNPGFDEERAVFY  107 (285)
T ss_pred             hHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHH---------------hcCcCCCCHHHHHHH
Confidence            34567889999999999999999999999999999999999999966553               222346889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCCchhhHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      +.|++.||.|||+.|++|+||||+||+++.        ||.+.......   ...+++.|+|||.+.+  ..++.++|+|
T Consensus       108 ~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Diw  185 (285)
T cd05605         108 AAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKN--ERYTFSPDWW  185 (285)
T ss_pred             HHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcC--CCCCccccch
Confidence            999999999999999999999999999875        66655432221   2356889999999986  5688999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----cH
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----AA  233 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~  233 (245)
                      |+|+++|++++|..||.+.........+....... .         ...+..++..+.+++.+||+.||.+||     ++
T Consensus       186 s~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~  255 (285)
T cd05605         186 GLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED-Q---------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGA  255 (285)
T ss_pred             hHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc-c---------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCH
Confidence            99999999999999998765544333332222110 0         011145788999999999999999999     89


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      +++++||||.
T Consensus       256 ~~l~~~~~~~  265 (285)
T cd05605         256 EEVKAHPFFR  265 (285)
T ss_pred             HHHhcCcCcc
Confidence            9999999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.2e-41  Score=255.29  Aligned_cols=219  Identities=17%  Similarity=0.229  Sum_probs=176.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc-----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQR-----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      +.+--.+|+++|+++.|||||++..+|....     ...+||||++. +|.++++.           +  ...+..++.-
T Consensus        60 d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~-----------~--~~~~~~mp~~  125 (364)
T KOG0658|consen   60 DKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRH-----------Y--TRANQRMPLL  125 (364)
T ss_pred             CCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHH-----------H--hhcCCCCcee
Confidence            3345568999999999999999988875432     36899999996 99777751           1  1224668888


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccCCC---CccccccccCceecCCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWISSS---SSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      .++-+..||..||+|||+.||+||||||+|+|++.         ||.++....+..   ...+-.|+|||++.+ ...|+
T Consensus       126 ~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifg-a~~Yt  204 (364)
T KOG0658|consen  126 EIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFG-ATEYT  204 (364)
T ss_pred             eeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcC-ccccC
Confidence            89999999999999999999999999999999987         998887766553   344889999999986 66899


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------CCCCCCCCCCCcccccHHHHH
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------QVAPNEDTTHGTRTLSKNFWN  217 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~  217 (245)
                      .+.||||.||++.||+-|++.|.+.+..+.+..+..-.......               +.....+........+++..+
T Consensus       205 ~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~d  284 (364)
T KOG0658|consen  205 TSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALD  284 (364)
T ss_pred             ceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHH
Confidence            99999999999999999999999988888877776554332211               111111222244678899999


Q ss_pred             HHHHhcCCCCCCCccHHHHhhccccc
Q 037274          218 MVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      |+.++|+++|.+|.++.+++.||||.
T Consensus       285 ll~~~L~Y~P~~R~~~~~~l~h~fFd  310 (364)
T KOG0658|consen  285 LLSKLLQYSPSKRLSALEALAHPFFD  310 (364)
T ss_pred             HHHHHhccChhhcCCHHHHhcchhhH
Confidence            99999999999999999999999995

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.1e-39  Score=248.14  Aligned_cols=202  Identities=22%  Similarity=0.295  Sum_probs=164.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++..++..++++|++++++|.+++..                 ...+++..+..+
T Consensus        47 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-----------------~~~~~~~~~~~~  109 (263)
T cd06625          47 EVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA-----------------YGALTETVTRKY  109 (263)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHH-----------------hCCCCHHHHHHH
Confidence            456789999999999999999999999999999999999999999776642                 235778888999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------CCCccccccccCceecCCCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.|++.||.|||+.|++|+||+|+||+++.        ||.+......       ....++..|+|||.+.+  ..++.+
T Consensus       110 ~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  187 (263)
T cd06625         110 TRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISG--EGYGRK  187 (263)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceecc--CCCCch
Confidence            999999999999999999999999999886        5655432211       12345778999999987  558899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|++++|+.||...+............   ..         ...+...+..+.+++.+||..+|.+|||+.
T Consensus       188 ~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  255 (263)
T cd06625         188 ADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP---TN---------PQLPSHVSPDARNFLRRTFVENAKKRPSAE  255 (263)
T ss_pred             hhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccC---CC---------CCCCccCCHHHHHHHHHHhhcCcccCCCHH
Confidence            999999999999999999998755444333322111   00         111255788999999999999999999999


Q ss_pred             HHhhcccc
Q 037274          235 AQVLQEMW  242 (245)
Q Consensus       235 ~~l~~~~f  242 (245)
                      ++++|+||
T Consensus       256 ~ll~~~~~  263 (263)
T cd06625         256 ELLRHFFV  263 (263)
T ss_pred             HHhhCCCC
Confidence            99999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.4e-39  Score=263.25  Aligned_cols=206  Identities=16%  Similarity=0.172  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++|+||+++++++.+.+..++||||+++|+|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~~~e~~~~~  105 (381)
T cd05626          43 NQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-----------------MEVFPEVLARF  105 (381)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHh-----------------cCCCCHHHHHH
Confidence            4567789999999999999999999999999999999999999999776642                 24578889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc--------------------------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI--------------------------------  128 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~--------------------------------  128 (245)
                      ++.|++.||.|||+.||+||||||+|||++.        ||++.....                                
T Consensus       106 ~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (381)
T cd05626         106 YIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRC  185 (381)
T ss_pred             HHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccccccccccc
Confidence            9999999999999999999999999999875        776432100                                


Q ss_pred             -------------------CCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhc
Q 037274          129 -------------------SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMK  189 (245)
Q Consensus       129 -------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~  189 (245)
                                         .....||+.|+|||.+.+  ..++.++|||||||++|+|++|..||...+.......+...
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~  263 (381)
T cd05626         186 GDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR--KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINW  263 (381)
T ss_pred             ccccchhhccccccccccccccccCCccccCHHHHcC--CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcc
Confidence                               012357899999999986  56889999999999999999999999886654444333321


Q ss_pred             CCCCccCCCCCCCCCCCCcccccHHHHHHHHHhc--CCCCCCCccHHHHhhccccc
Q 037274          190 QPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL--APDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l--~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..   ....+       ....+++++.++|.+|+  ..+|..|+++++++.||||.
T Consensus       264 ~~---~~~~~-------~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~  309 (381)
T cd05626         264 EN---TLHIP-------PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFS  309 (381)
T ss_pred             cc---ccCCC-------CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccC
Confidence            11   01111       11457899999999954  55566699999999999995

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-39  Score=265.00  Aligned_cols=205  Identities=16%  Similarity=0.197  Sum_probs=164.5

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|++++++++||||+++++++.+++..|+||||+++|+|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~~~~~~~~~  105 (377)
T cd05629          43 DQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK-----------------YDTFSEDVTRF  105 (377)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh-----------------cCCCCHHHHHH
Confidence            3556788999999999999999999999999999999999999999766642                 34578889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------------------------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------------------------------  129 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------------------------------  129 (245)
                      ++.|++.||.|||+.|++||||||+|||++.        ||++......                               
T Consensus       106 ~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (377)
T cd05629         106 YMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSIN  185 (377)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999865        7766421100                               


Q ss_pred             --------------------CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhc
Q 037274          130 --------------------SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMK  189 (245)
Q Consensus       130 --------------------~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~  189 (245)
                                          ....||+.|+|||.+.+  ..++.++|||||||++|+|++|..||...+..+....+...
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~  263 (377)
T cd05629         186 LTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ--QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINW  263 (377)
T ss_pred             ccccchhhhhhhhhcccccccccCCCccccCHHHHcc--CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHcc
Confidence                                01357899999999986  56899999999999999999999999886665555444322


Q ss_pred             CCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC---ccHHHHhhccccc
Q 037274          190 QPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR---PAAEAQVLQEMWH  243 (245)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R---pt~~~~l~~~~f~  243 (245)
                      ..   ....+       ....++.++.++|.+||. +|.+|   +++.++++||||.
T Consensus       264 ~~---~~~~p-------~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~  309 (377)
T cd05629         264 RE---TLYFP-------DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFR  309 (377)
T ss_pred             CC---ccCCC-------CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcC
Confidence            11   00111       113578899999999998 67665   5999999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=5.9e-40  Score=261.65  Aligned_cols=202  Identities=19%  Similarity=0.247  Sum_probs=166.7

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .....+..|+++++.++||||+++++++...+..++||||+++|+|..++..                 ...+++..+..
T Consensus        37 ~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-----------------~~~l~~~~~~~   99 (325)
T cd05594          37 DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-----------------ERVFSEDRARF   99 (325)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHh-----------------cCCCCHHHHHH
Confidence            4556778899999999999999999999999999999999999999665532                 34588999999


Q ss_pred             HHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.||.|||+ .|++||||||+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.++
T Consensus       100 ~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  177 (325)
T cd05594         100 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED--NDYGRAV  177 (325)
T ss_pred             HHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHcc--CCCCCcc
Confidence            99999999999997 79999999999999975        776543221    113457999999999987  5689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc----
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP----  231 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----  231 (245)
                      |||||||++|+|++|..||...+.......+.....              ..+..+++++.+++.+||+.||.+|+    
T Consensus       178 DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~--------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~  243 (325)
T cd05594         178 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--------------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGP  243 (325)
T ss_pred             ccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC--------------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCC
Confidence            999999999999999999988665554444322210              11145788999999999999999997    


Q ss_pred             -cHHHHhhccccc
Q 037274          232 -AAEAQVLQEMWH  243 (245)
Q Consensus       232 -t~~~~l~~~~f~  243 (245)
                       ++.++++||||.
T Consensus       244 ~~~~~il~h~~~~  256 (325)
T cd05594         244 DDAKEIMQHKFFA  256 (325)
T ss_pred             CCHHHHhcCCCcC
Confidence             899999999985

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=3.6e-39  Score=251.66  Aligned_cols=207  Identities=14%  Similarity=0.166  Sum_probs=161.7

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+..|++++++++||||+++++.+.++...+++|||+++++|.+++.               ......+++..+..++
T Consensus        37 ~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~---------------~~~~~~~~~~~~~~~~  101 (277)
T cd05607          37 EKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIY---------------NVGERGLEMERVIHYS  101 (277)
T ss_pred             hHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHH---------------hccccCCCHHHHHHHH
Confidence            4456679999999999999999999999999999999999999966553               1223457888899999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCCchhhHHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      .|++.||+|||+.|++|+||||+||+++.        ||.+.......   ...+++.|+|||.+.+  ..++.++|+||
T Consensus       102 ~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dvws  179 (277)
T cd05607         102 AQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKE--EPYSYPVDWFA  179 (277)
T ss_pred             HHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHcc--CCCCCchhHHH
Confidence            99999999999999999999999999976        66554332221   2456889999999987  45899999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH----HH
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA----EA  235 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~----~~  235 (245)
                      |||++|+|++|..||...................   ...      .....+++++.+++++||+.||.+||++    ++
T Consensus       180 lGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~  250 (277)
T cd05607         180 MGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED---EVK------FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDD  250 (277)
T ss_pred             HHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc---ccc------cccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence            9999999999999997643322222221111100   000      0114578899999999999999999999    67


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      ++.|+||.
T Consensus       251 ~~~h~~f~  258 (277)
T cd05607         251 PRKHEFFK  258 (277)
T ss_pred             hhcChhhc
Confidence            88999994

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=3.2e-39  Score=260.16  Aligned_cols=206  Identities=23%  Similarity=0.308  Sum_probs=160.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+++++.++|+||+++++++..++..++|+||+++|+|.+                     ....++..+
T Consensus       112 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~---------------------~~~~~~~~~  170 (353)
T PLN00034        112 EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEG---------------------THIADEQFL  170 (353)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccc---------------------cccCCHHHH
Confidence            44566789999999999999999999999999999999999999999832                     123456778


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCC---CCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFG---DDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~---~~~~  151 (245)
                      ..++.||+.||.|||++|++||||||+|||++.        ||++......    ....++..|+|||.+...   ....
T Consensus       171 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  250 (353)
T PLN00034        171 ADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYD  250 (353)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCC
Confidence            889999999999999999999999999999876        7766543321    234679999999988531   1234


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|||||||++|+|++|+.||......+..... ........         ......++.++.++|.+||+.||++||
T Consensus       251 ~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~~P~~Rp  320 (353)
T PLN00034        251 GYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLM-CAICMSQP---------PEAPATASREFRHFISCCLQREPAKRW  320 (353)
T ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHH-HHHhccCC---------CCCCCccCHHHHHHHHHHccCChhhCc
Confidence            57899999999999999999999743322221111 11100000         011145788999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      |+.++++||||.
T Consensus       321 t~~ell~hp~~~  332 (353)
T PLN00034        321 SAMQLLQHPFIL  332 (353)
T ss_pred             CHHHHhcCcccc
Confidence            999999999985

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.1e-40  Score=261.81  Aligned_cols=201  Identities=19%  Similarity=0.204  Sum_probs=166.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+..|++++++++||||+++++++.+++..++|+||+++|+|.+++..                 ...+++..+..+
T Consensus        41 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~~  103 (318)
T cd05582          41 DRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-----------------EVMFTEEDVKFY  103 (318)
T ss_pred             hHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-----------------cCCCCHHHHHHH
Confidence            445678899999999999999999999999999999999999999665531                 345889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||+.|++||||||+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.++||
T Consensus       104 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Di  181 (318)
T cd05582         104 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR--RGHTQSADW  181 (318)
T ss_pred             HHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcC--CCCCCccce
Confidence            999999999999999999999999999975        7766543322    13456899999999986  567899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----  232 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----  232 (245)
                      |||||++|+|++|+.||...+.......+.....     .         .+..+++.+.+++++||+.||.+||+     
T Consensus       182 wslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~-----~---------~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~  247 (318)
T cd05582         182 WSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL-----G---------MPQFLSPEAQSLLRALFKRNPANRLGAGPDG  247 (318)
T ss_pred             eccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC-----C---------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCC
Confidence            9999999999999999988666555544432210     1         11457889999999999999999999     


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      +++++.|+||.
T Consensus       248 ~~~~~~~~~~~  258 (318)
T cd05582         248 VEEIKRHPFFS  258 (318)
T ss_pred             HHHHhCCCCcC
Confidence            78899999985

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2.5e-39  Score=257.21  Aligned_cols=202  Identities=17%  Similarity=0.245  Sum_probs=166.4

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+.+..|+.+++.+ +||||+++++++.+.+..++||||+++|+|...+..                 ...+++..+.
T Consensus        37 ~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~l~~~~~~   99 (318)
T cd05570          37 DDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR-----------------SGRFDEPRAR   99 (318)
T ss_pred             hHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-----------------cCCCCHHHHH
Confidence            4566778899999888 699999999999999999999999999999665532                 3468899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||+|||+.|++|+||||+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.++
T Consensus       100 ~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~  177 (318)
T cd05570         100 FYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSY--QPYGPAV  177 (318)
T ss_pred             HHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcC--CCCCcch
Confidence            99999999999999999999999999999875        666543211    112346899999999987  6689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH--
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA--  233 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~--  233 (245)
                      |+|||||++|+|++|..||...+.......+.....              ..+..++.++.+++.+||+.||.+||++  
T Consensus       178 DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~--------------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~  243 (318)
T cd05570         178 DWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV--------------RYPRWLSKEAKSILKSFLTKNPEKRLGCLP  243 (318)
T ss_pred             hhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC--------------CCCCcCCHHHHHHHHHHccCCHHHcCCCCC
Confidence            999999999999999999987665555444332210              1114578899999999999999999999  


Q ss_pred             ---HHHhhccccc
Q 037274          234 ---EAQVLQEMWH  243 (245)
Q Consensus       234 ---~~~l~~~~f~  243 (245)
                         .+++.||||+
T Consensus       244 ~~~~~ll~~~~~~  256 (318)
T cd05570         244 TGEQDIKGHPFFR  256 (318)
T ss_pred             CCHHHHhcCCCcC
Confidence               9999999985

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=2.5e-39  Score=258.34  Aligned_cols=207  Identities=16%  Similarity=0.218  Sum_probs=162.7

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+..+.+..|+.+++++ +||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+
T Consensus        36 ~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-----------------~~~l~~~~~   98 (329)
T cd05588          36 DEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQR-----------------QRKLPEEHA   98 (329)
T ss_pred             hhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHH-----------------cCCCCHHHH
Confidence            34566788999999998 699999999999999999999999999999655531                 346899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc----cCCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW----ISSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||.|||++|++||||||+||+++.        ||++....    ......||+.|+|||.+.+  ..++.+
T Consensus        99 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  176 (329)
T cd05588          99 RFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRG--EDYGFS  176 (329)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcC--CCCCCc
Confidence            999999999999999999999999999999875        77654321    1123457899999999987  568899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchH-----HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLD-----IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      +|+|||||++|++++|+.||......+     ........... ...         ..+..++.++.+++.+||+.||.+
T Consensus       177 ~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~p~~~~~~~~~li~~~L~~dP~~  246 (329)
T cd05588         177 VDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE-KQI---------RIPRSLSVKASSVLKGFLNKDPKE  246 (329)
T ss_pred             cceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc-CCC---------CCCCCCCHHHHHHHHHHhccCHHH
Confidence            999999999999999999996321111     11111111100 000         112457889999999999999999


Q ss_pred             Ccc------HHHHhhccccc
Q 037274          230 RPA------AEAQVLQEMWH  243 (245)
Q Consensus       230 Rpt------~~~~l~~~~f~  243 (245)
                      |++      ++++++||||.
T Consensus       247 R~~~~~~~~~~~i~~hp~~~  266 (329)
T cd05588         247 RLGCHPQTGFRDIKSHPFFR  266 (329)
T ss_pred             cCCCCCCCCHHHHhcCCCCC
Confidence            997      78999999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=9.4e-39  Score=249.90  Aligned_cols=200  Identities=18%  Similarity=0.173  Sum_probs=160.5

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+.+.+|+.++++++||||+++++++.+    ....++++||+++|+|.+++..                 ...+++...
T Consensus        62 ~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----------------~~~~~~~~~  124 (283)
T PHA02988         62 IDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK-----------------EKDLSFKTK  124 (283)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh-----------------CCCCChhHH
Confidence            5778899999999999999999999876    3468999999999999777652                 235778888


Q ss_pred             HHHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCchhh
Q 037274           87 AIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ..++.|++.||.+||+ .+++||||||+||+++.        ||++....... ...+++.|+|||.+.+....++.++|
T Consensus       125 ~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~D  204 (283)
T PHA02988        125 LDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDD  204 (283)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhh
Confidence            9999999999999998 48999999999999886        66655433222 34468899999998752246899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      ||||||++|+|++|..||...+..+....+......   ..         .+...++.+.+++.+||+.||++|||+.++
T Consensus       205 i~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~---~~---------~~~~~~~~l~~li~~cl~~dp~~Rps~~el  272 (283)
T PHA02988        205 IYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNS---LK---------LPLDCPLEIKCIVEACTSHDSIKRPNIKEI  272 (283)
T ss_pred             hhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC---CC---------CCCcCcHHHHHHHHHHhcCCcccCcCHHHH
Confidence            999999999999999999987665555544332211   01         113578899999999999999999999998


Q ss_pred             hhc
Q 037274          237 VLQ  239 (245)
Q Consensus       237 l~~  239 (245)
                      +..
T Consensus       273 l~~  275 (283)
T PHA02988        273 LYN  275 (283)
T ss_pred             HHH
Confidence            753

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-40  Score=263.80  Aligned_cols=205  Identities=18%  Similarity=0.214  Sum_probs=169.1

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.++..++|+||+++++++.+++..++||||+++++|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~  105 (350)
T cd05573          43 NQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIR-----------------KDVFPEETARF  105 (350)
T ss_pred             cHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHH-----------------cCCCCHHHHHH
Confidence            4566789999999999999999999999999999999999999999776642                 24688899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------------------------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------------------------------  130 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------------------------------  130 (245)
                      ++.|++.||+|||+.|++||||||+||+++.        ||++.......                              
T Consensus       106 i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (350)
T cd05573         106 YIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRV  185 (350)
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999876        67655433221                              


Q ss_pred             ---CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCC
Q 037274          131 ---SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHG  207 (245)
Q Consensus       131 ---~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (245)
                         ...+|+.|+|||.+.+  ..++.++|||||||++|+|++|+.||...+.......+.......   ..+.       
T Consensus       186 ~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~---~~p~-------  253 (350)
T cd05573         186 RANSTVGTPDYIAPEVLRG--TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESL---RFPP-------  253 (350)
T ss_pred             cccccccCccccCHHHHcC--CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcc---cCCC-------
Confidence               3456899999999987  578999999999999999999999999877655555544321110   1111       


Q ss_pred             cccccHHHHHHHHHhcCCCCCCCcc-HHHHhhccccc
Q 037274          208 TRTLSKNFWNMVKICLAPDPAKRPA-AEAQVLQEMWH  243 (245)
Q Consensus       208 ~~~~~~~~~~li~~~l~~~p~~Rpt-~~~~l~~~~f~  243 (245)
                      ...+++++.++|.+|+. ||.+||+ ++++++||||.
T Consensus       254 ~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~  289 (350)
T cd05573         254 DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFK  289 (350)
T ss_pred             CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcC
Confidence            13378999999999998 9999999 99999999985

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.8e-39  Score=256.89  Aligned_cols=201  Identities=17%  Similarity=0.240  Sum_probs=164.3

Q ss_pred             HHHHHHHHHHHHH---hhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            9 EEYAKLAREIYRY---KHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         9 ~~~~~~~~E~~~l---~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      +..+.+.+|++++   +.++||||+++++++.+.+..|+||||+++++|...+.                  ...+++..
T Consensus        41 ~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~------------------~~~l~~~~  102 (324)
T cd05589          41 DEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIH------------------TDVFSEPR  102 (324)
T ss_pred             hHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhh------------------cCCCCHHH
Confidence            3456677777765   45679999999999999999999999999999955443                  24688999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCc
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +..++.|++.||.|||+.|++||||||+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.
T Consensus       103 ~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~  180 (324)
T cd05589         103 AVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTE--TSYTR  180 (324)
T ss_pred             HHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcC--CCCCc
Confidence            9999999999999999999999999999999975        776543221    123457899999999987  56889


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc--
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP--  231 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp--  231 (245)
                      ++|+|||||++|+|++|+.||.+.+.......+.....              ..+..+++.+.+++.+||+.||.+||  
T Consensus       181 ~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~--------------~~p~~~~~~~~~li~~~L~~dP~~R~~~  246 (324)
T cd05589         181 AVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV--------------RYPRFLSREAISIMRRLLRRNPERRLGS  246 (324)
T ss_pred             ccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------CCCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence            99999999999999999999998766655554433211              01145788999999999999999999  


Q ss_pred             ---cHHHHhhccccc
Q 037274          232 ---AAEAQVLQEMWH  243 (245)
Q Consensus       232 ---t~~~~l~~~~f~  243 (245)
                         ++.++++||||+
T Consensus       247 ~~~~~~~l~~~~~f~  261 (324)
T cd05589         247 GEKDAEDVKKQPFFR  261 (324)
T ss_pred             CCCCHHHHhhCCCcC
Confidence               699999999985

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=2.3e-39  Score=257.79  Aligned_cols=203  Identities=17%  Similarity=0.202  Sum_probs=167.5

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+..+.+..|..++..+ +||||+++++++.+++..++||||+++|+|...+..                 ...+++..+
T Consensus        36 ~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-----------------~~~~~~~~~   98 (321)
T cd05591          36 DDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQR-----------------SRKFDEPRS   98 (321)
T ss_pred             hhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHHH
Confidence            34556778899998876 799999999999999999999999999999665542                 345788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||.|||+.|++||||||+||+++.        ||.+.....    .....+++.|+|||.+.+  ..++.+
T Consensus        99 ~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  176 (321)
T cd05591          99 RFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQE--LEYGPS  176 (321)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcC--CCCCCc
Confidence            999999999999999999999999999999976        776543221    123456899999999986  568999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---  231 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---  231 (245)
                      +|||||||++|+|++|+.||...+.......+.....              ..+..++.++.+++.+||+.||.+||   
T Consensus       177 ~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~--------------~~p~~~~~~~~~ll~~~L~~dp~~R~~~~  242 (321)
T cd05591         177 VDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV--------------LYPVWLSKEAVSILKAFMTKNPNKRLGCV  242 (321)
T ss_pred             cceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--------------CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence            9999999999999999999998776666655543221              01134678999999999999999999   


Q ss_pred             ----cHHHHhhccccc
Q 037274          232 ----AAEAQVLQEMWH  243 (245)
Q Consensus       232 ----t~~~~l~~~~f~  243 (245)
                          +++++++||||.
T Consensus       243 ~~~~~~~~~~~hp~~~  258 (321)
T cd05591         243 ASQGGEDAIKQHPFFK  258 (321)
T ss_pred             CCCCCHHHHhcCCccC
Confidence                899999999985

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.2e-39  Score=256.31  Aligned_cols=202  Identities=16%  Similarity=0.235  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+....|..++..+ +||||+++++++.+++..++||||+.+|+|.+++..                 ...+++..+.
T Consensus        37 ~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-----------------~~~~~~~~~~   99 (316)
T cd05620          37 DDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQD-----------------KGRFDLYRAT   99 (316)
T ss_pred             chHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHH-----------------cCCCCHHHHH
Confidence            3456677788888754 899999999999999999999999999999666542                 3457888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||+|||++|++||||||+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.++
T Consensus       100 ~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  177 (316)
T cd05620         100 FYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQG--LKYTFSV  177 (316)
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcC--CCCCccc
Confidence            99999999999999999999999999999975        776543211    123456999999999987  5689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH-H
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA-E  234 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~  234 (245)
                      |||||||++|+|++|..||...+.......+.....              ..+..++.++.+++.+||+.||.+||++ +
T Consensus       178 DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~dP~~R~~~~~  243 (316)
T cd05620         178 DWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTP--------------HYPRWITKESKDILEKLFERDPTRRLGVVG  243 (316)
T ss_pred             chhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------CCCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence            999999999999999999988666555444332210              0113478899999999999999999997 5


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       244 ~~~~h~~f~  252 (316)
T cd05620         244 NIRGHPFFK  252 (316)
T ss_pred             HHHcCCCcC
Confidence            788999995

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=9.5e-39  Score=242.82  Aligned_cols=218  Identities=21%  Similarity=0.286  Sum_probs=176.0

Q ss_pred             HHHHHHHHHHHhhCCCCC-eeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           11 YAKLAREIYRYKHLSHPN-IIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~-Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      -....+|+-+|+.|+|+| |+++++.+.+.+      .+++|+||++. +|..+++..+..             ...++.
T Consensus        54 P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~-------------~~g~~~  119 (323)
T KOG0594|consen   54 PSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKK-------------PQGLPP  119 (323)
T ss_pred             CchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhcccc-------------ccCCCH
Confidence            345689999999999999 999999998877      79999999986 998888743311             135677


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ..++.++.|++.||+|||++||+||||||+|||++.        ||++.....+.    ...+|.+|.|||++.+ ...|
T Consensus       120 ~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlG-s~~Y  198 (323)
T KOG0594|consen  120 RLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLG-STSY  198 (323)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcC-CCcC
Confidence            899999999999999999999999999999999997        88877555333    3445999999999986 4569


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCC---------CCCCCc-------ccccHHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNE---------DTTHGT-------RTLSKNF  215 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-------~~~~~~~  215 (245)
                      ++..||||+||+++||+++++.|.+..+.+....+++..........+...         ..+..+       ...++..
T Consensus       199 s~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~  278 (323)
T KOG0594|consen  199 STSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDG  278 (323)
T ss_pred             CCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccH
Confidence            999999999999999999999999999988888888876554332222110         011111       2223478


Q ss_pred             HHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          216 WNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       216 ~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+++.+||+.+|.+|.|+..++.||||.
T Consensus       279 ~dll~~~L~y~p~~R~Sa~~al~h~yf~  306 (323)
T KOG0594|consen  279 IELLSKLLQYDPAKRISAKGALTHPYFS  306 (323)
T ss_pred             HHHHHHHhccCcccCcCHHHHhcChhhc
Confidence            9999999999999999999999999995

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3.5e-39  Score=266.07  Aligned_cols=216  Identities=16%  Similarity=0.216  Sum_probs=162.6

Q ss_pred             HHHHHHHHHhhCCCCCeeeEEEEEEeC--------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274           13 KLAREIYRYKHLSHPNIIPIYKTMISQ--------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~Iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ...+|+.+++.++||||+++++++...        ..+++||||+++ +|.+++..             .......+++.
T Consensus       105 ~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~-------------~~~~~~~l~~~  170 (440)
T PTZ00036        105 YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKH-------------YARNNHALPLF  170 (440)
T ss_pred             hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHH-------------HhhcCCCCCHH
Confidence            345799999999999999998886432        236799999985 77665531             11124568899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccCC---CCccccccccCceecCCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      .++.++.|++.||+|||+.||+||||||+|||++.         ||+++......   ...+++.|+|||.+.+ ...++
T Consensus       171 ~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~  249 (440)
T PTZ00036        171 LVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLG-ATNYT  249 (440)
T ss_pred             HHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcC-CCCCC
Confidence            99999999999999999999999999999999974         77776443222   3456899999999864 34689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc------------CC---CCCCCCCCCCcccccHHHHH
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS------------LQ---VAPNEDTTHGTRTLSKNFWN  217 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------~~---~~~~~~~~~~~~~~~~~~~~  217 (245)
                      .++|||||||++|+|++|.+||.+.+..+....+.........            ..   ..........+...++++.+
T Consensus       250 ~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~  329 (440)
T PTZ00036        250 THIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAIN  329 (440)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHH
Confidence            9999999999999999999999987766655554433211100            00   00000111122456789999


Q ss_pred             HHHHhcCCCCCCCccHHHHhhccccc
Q 037274          218 MVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ||.+||+.||.+|||+.++++||||.
T Consensus       330 li~~~L~~dP~~R~ta~e~l~hp~f~  355 (440)
T PTZ00036        330 FISQFLKYEPLKRLNPIEALADPFFD  355 (440)
T ss_pred             HHHHHCCCChhHCcCHHHHhCChhHH
Confidence            99999999999999999999999984

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=3e-39  Score=262.93  Aligned_cols=205  Identities=18%  Similarity=0.198  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++|+||+++++.+.+++..++||||+++|+|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~~~e~~~~~  105 (382)
T cd05625          43 NQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-----------------MGIFPEDLARF  105 (382)
T ss_pred             HHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHh-----------------cCCCCHHHHHH
Confidence            4567789999999999999999999999999999999999999999776642                 23578889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc---------------------------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW---------------------------------  127 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~---------------------------------  127 (245)
                      ++.|++.||.|||+.||+||||||+|||++.        ||++....                                 
T Consensus       106 ~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (382)
T cd05625         106 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRC  185 (382)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999865        77643110                                 


Q ss_pred             ------------------cCCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhc
Q 037274          128 ------------------ISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMK  189 (245)
Q Consensus       128 ------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~  189 (245)
                                        ......||+.|+|||.+.+  ..++.++|||||||++|+|++|..||...+.......+...
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~  263 (382)
T cd05625         186 GDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR--TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINW  263 (382)
T ss_pred             cccccchhhhhccccccccccccccCcccCCHHHhcC--CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHcc
Confidence                              0012357899999999986  56899999999999999999999999886655544443322


Q ss_pred             CCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc---HHHHhhccccc
Q 037274          190 QPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA---AEAQVLQEMWH  243 (245)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~~~l~~~~f~  243 (245)
                      ..   ....+       ....+++++.++|.+|+. +|.+|++   ++++++||||.
T Consensus       264 ~~---~~~~p-------~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~  309 (382)
T cd05625         264 QT---SLHIP-------PQAKLSPEASDLIIKLCR-GPEDRLGKNGADEIKAHPFFK  309 (382)
T ss_pred             CC---CcCCC-------CcccCCHHHHHHHHHHcc-CHhHcCCCCCHHHHhcCCCcC
Confidence            11   01111       114578899999999864 9999997   99999999985

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.8e-39  Score=258.52  Aligned_cols=207  Identities=16%  Similarity=0.157  Sum_probs=163.7

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ...+.+..|+++++++ +|+||+++++++..++..+++|||+++|+|.+++..                 ...+++..+.
T Consensus        46 ~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----------------~~~~~~~~~~  108 (332)
T cd05614          46 KTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ-----------------RDNFSEDEVR  108 (332)
T ss_pred             hHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHHHH
Confidence            4456788999999999 489999999999999999999999999999666542                 3458899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----CCCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.||+.||.|||+.|++||||||+|||++.        ||++......     ....||+.|+|||.+.+ ...++.+
T Consensus       109 ~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~  187 (332)
T cd05614         109 FYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRG-KGGHGKA  187 (332)
T ss_pred             HHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcC-CCCCCCc
Confidence            99999999999999999999999999999975        7766543221     13457999999999875 3457889


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---  231 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---  231 (245)
                      +|||||||++|+|++|..||...................   ..       ..+..+++.+.+++.+||+.||++||   
T Consensus       188 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~~~~~~~li~~~l~~dp~~R~~~~  257 (332)
T cd05614         188 VDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC---DP-------PFPSFIGPEAQDLLHKLLRKDPKKRLGAG  257 (332)
T ss_pred             cccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC---CC-------CCCCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence            999999999999999999997543322221111111000   00       11145788999999999999999999   


Q ss_pred             --cHHHHhhccccc
Q 037274          232 --AAEAQVLQEMWH  243 (245)
Q Consensus       232 --t~~~~l~~~~f~  243 (245)
                        +++++++||||.
T Consensus       258 ~~~~~~~l~h~~~~  271 (332)
T cd05614         258 PQGASEIKEHPFFK  271 (332)
T ss_pred             CCCHHHHHcCCCcC
Confidence              888999999985

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-40  Score=271.72  Aligned_cols=213  Identities=23%  Similarity=0.306  Sum_probs=173.0

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      +..+..+-+..|+.+.++|+|+|||++.|++..++.+-++||.++||+|++++++.             | +.-.-+++.
T Consensus       611 kdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrsk-------------W-GPlKDNEst  676 (1226)
T KOG4279|consen  611 KDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSK-------------W-GPLKDNEST  676 (1226)
T ss_pred             ccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhc-------------c-CCCccchhH
Confidence            34456667899999999999999999999999999999999999999999988742             2 112237889


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCcccccc----CCCCccccccccCceecCCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +..+.+||++||.|||++.|||||||.+|+|++.         ||.++....    ..+..||..|||||.+..|...|+
T Consensus       677 m~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG  756 (1226)
T KOG4279|consen  677 MNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYG  756 (1226)
T ss_pred             HHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCC
Confidence            9999999999999999999999999999999876         776554432    225677999999999999999999


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ..+|||||||.+.||.||++||.......   ..+........ .       ...+..++.+.++||.+|+.+||.+||+
T Consensus       757 ~aADIWS~GCT~vEMATGrPPF~Elgspq---AAMFkVGmyKv-H-------P~iPeelsaeak~FilrcFepd~~~R~s  825 (1226)
T KOG4279|consen  757 KAADIWSFGCTMVEMATGRPPFVELGSPQ---AAMFKVGMYKV-H-------PPIPEELSAEAKNFILRCFEPDPCDRPS  825 (1226)
T ss_pred             chhhhhhccceeEeeccCCCCeeecCChh---Hhhhhhcceec-C-------CCCcHHHHHHHHHHHHHHcCCCcccCcc
Confidence            99999999999999999999997643322   22222211111 1       1122678889999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      +.++|+.||-+
T Consensus       826 A~~LL~DpFlq  836 (1226)
T KOG4279|consen  826 AKDLLQDPFLQ  836 (1226)
T ss_pred             HHHhccCcccc
Confidence            99999999853

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=6.6e-39  Score=251.80  Aligned_cols=214  Identities=19%  Similarity=0.265  Sum_probs=162.0

Q ss_pred             HHHHHHHHHHHhhC---CCCCeeeEEEEEEe-----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274           11 YAKLAREIYRYKHL---SHPNIIPIYKTMIS-----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus        11 ~~~~~~E~~~l~~l---~h~~Iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ...+.+|+.+++++   +||||+++++++..     ....++++|++. ++|.+++..               .....++
T Consensus        45 ~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---------------~~~~~~~  108 (290)
T cd07862          45 PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDK---------------VPEPGVP  108 (290)
T ss_pred             hHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHh---------------CCCCCCC
Confidence            34566788777766   69999999998752     345899999997 588666642               1234578


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..+..++.|++.||.|||+.|++|+||||+||+++.        ||.+......   ....+++.|+|||.+.+  ..+
T Consensus       109 ~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  186 (290)
T cd07862         109 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ--SSY  186 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhC--CCC
Confidence            8999999999999999999999999999999999975        7766443322   23446899999999976  568


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC-------------CCCCCCCCcccccHHHHHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA-------------PNEDTTHGTRTLSKNFWNM  218 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l  218 (245)
                      +.++|||||||++|+|++|++||.+.+..+....+............+             ............++.+.++
T Consensus       187 ~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  266 (290)
T cd07862         187 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL  266 (290)
T ss_pred             CCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHH
Confidence            899999999999999999999999887777666655432111000000             0000001113467889999


Q ss_pred             HHHhcCCCCCCCccHHHHhhcccc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      +.+||+.||++|||+.++++||||
T Consensus       267 i~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         267 LLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHHHhccCchhcCCHHHHhcCCCC
Confidence            999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=4.3e-39  Score=260.37  Aligned_cols=206  Identities=17%  Similarity=0.266  Sum_probs=166.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+++.++||||+++++++.+++..++||||+++|+|.+++.                  ...+++..+..+
T Consensus        86 ~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~------------------~~~~~~~~~~~~  147 (370)
T cd05621          86 DSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS------------------NYDVPEKWAKFY  147 (370)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHH------------------hcCCCHHHHHHH
Confidence            45568899999999999999999999999999999999999999977664                  234788889999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----CCCccccccccCceecCC--CCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----SSSSITTWAAAPEVVNFG--DDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~~--~~~~~~~  154 (245)
                      +.||+.||+|||+.|++||||||+|||++.        ||++......     ....+|+.|+|||.+.+.  ...++.+
T Consensus       148 ~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~  227 (370)
T cd05621         148 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE  227 (370)
T ss_pred             HHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcc
Confidence            999999999999999999999999999976        7776544321     244579999999998752  1237889


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC--Ccc
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK--RPA  232 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rpt  232 (245)
                      +|+|||||++|+|++|..||...+.......+......   ...+.       ...++..+.+++..||..++.+  |++
T Consensus       228 ~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~---~~~p~-------~~~~s~~~~~li~~~L~~~~~r~~R~~  297 (370)
T cd05621         228 CDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS---LNFPE-------DVEISKHAKNLICAFLTDREVRLGRNG  297 (370)
T ss_pred             cCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcc---cCCCC-------cccCCHHHHHHHHHHccCchhccCCCC
Confidence            99999999999999999999987766665555432210   11111       1356889999999999865544  889


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       298 ~~e~l~hp~~~  308 (370)
T cd05621         298 VEEIKQHPFFK  308 (370)
T ss_pred             HHHHhcCcccC
Confidence            99999999996

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-40  Score=264.68  Aligned_cols=208  Identities=23%  Similarity=0.380  Sum_probs=181.6

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .+.+.+.++..||..|++|.|||++.+-|++..+...|+|||||-| |-.|+++-                .+.++.+.+
T Consensus        65 Qs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG-SAsDlleV----------------hkKplqEvE  127 (948)
T KOG0577|consen   65 QSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDLLEV----------------HKKPLQEVE  127 (948)
T ss_pred             ccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc-cHHHHHHH----------------HhccchHHH
Confidence            3556889999999999999999999999999999999999999985 88777752                256788999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCccccccccCceecC-CCCCCCchhh
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSITTWAAAPEVVNF-GDDYYSCKSD  156 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~~D  156 (245)
                      |..|+.+.+.||+|||+.+.+|||||+.|||++.        ||.+........+.|||.|||||++.. ....|+-++|
T Consensus       128 IAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvD  207 (948)
T KOG0577|consen  128 IAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVD  207 (948)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccc
Confidence            9999999999999999999999999999999987        888888888889999999999999875 3456999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      |||||+++.|+..+++|++..+....+.-+.++.         .|.   .....++..+++|+..||+.-|.+|||.+++
T Consensus       208 vWSLGITCIELAERkPPlFnMNAMSALYHIAQNe---------sPt---Lqs~eWS~~F~~Fvd~CLqKipqeRptse~l  275 (948)
T KOG0577|consen  208 VWSLGITCIELAERKPPLFNMNAMSALYHIAQNE---------SPT---LQSNEWSDYFRNFVDSCLQKIPQERPTSEEL  275 (948)
T ss_pred             eeeccchhhhhhhcCCCccCchHHHHHHHHHhcC---------CCC---CCCchhHHHHHHHHHHHHhhCcccCCcHHHH
Confidence            9999999999999999999988777766655443         111   1137789999999999999999999999999


Q ss_pred             hhcccc
Q 037274          237 VLQEMW  242 (245)
Q Consensus       237 l~~~~f  242 (245)
                      +.|+|-
T Consensus       276 l~H~fv  281 (948)
T KOG0577|consen  276 LKHRFV  281 (948)
T ss_pred             hhcchh
Confidence            999983

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.1e-39  Score=261.35  Aligned_cols=213  Identities=18%  Similarity=0.200  Sum_probs=159.0

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|++++++|+||||+++++++..++..++++|++. ++|.+++..                 ...+++..++.++
T Consensus       127 ~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~-----------------~~~l~~~~~~~i~  188 (391)
T PHA03212        127 RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAA-----------------KRNIAICDILAIE  188 (391)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHh-----------------cCCCCHHHHHHHH
Confidence            3467899999999999999999999999999999999986 577555431                 3457888999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-----CCCCccccccccCceecCCCCCCCchhhH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-----SSSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      .|++.||.|||+.||+||||||+||+++.        ||++.....     .....+|+.|+|||++.+  ..++.++||
T Consensus       189 ~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di  266 (391)
T PHA03212        189 RSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLAR--DPYGPAVDI  266 (391)
T ss_pred             HHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcC--CCCCcHHHH
Confidence            99999999999999999999999999975        777653221     113457999999999986  568999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCc-------hHHHHHHHhcCCCCc-cC--------------------CCCCCCCCCCCcc
Q 037274          158 WLIGITALQFPCGGLPVSRRQD-------LDIMTKMLMKQPKST-SL--------------------QVAPNEDTTHGTR  209 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~~~~~~  209 (245)
                      |||||++|+|++|..||.....       ......+........ .+                    ..+.....+....
T Consensus       267 wSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (391)
T PHA03212        267 WSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLY  346 (391)
T ss_pred             HHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHh
Confidence            9999999999999988764321       111121211110000 00                    0000000001112


Q ss_pred             cccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          210 TLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       210 ~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..+.++.++|.+||+.||.+|||++++++||||+
T Consensus       347 ~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~  380 (391)
T PHA03212        347 ELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ  380 (391)
T ss_pred             hhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence            3567899999999999999999999999999995

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=7.6e-39  Score=254.13  Aligned_cols=202  Identities=16%  Similarity=0.238  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+....|..+++.+ +||||+++++++.+.+..++||||+++|+|.+++..                 ...+++..+.
T Consensus        37 ~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-----------------~~~~~~~~~~   99 (316)
T cd05619          37 DDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS-----------------CHKFDLPRAT   99 (316)
T ss_pred             chHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHHHH
Confidence            3455677788888764 899999999999999999999999999999766642                 2457888899


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||++|++||||||+||+++.        ||++.....    .....+|+.|+|||.+.+  ..++.++
T Consensus       100 ~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  177 (316)
T cd05619         100 FYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLG--QKYNTSV  177 (316)
T ss_pred             HHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcC--CCCCchh
Confidence            99999999999999999999999999999875        776543211    123456899999999986  5689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH-
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE-  234 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-  234 (245)
                      |+|||||++|+|++|..||...+.......+....          +    ..+..++.++.+++.+||+.||.+||++. 
T Consensus       178 DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~----------~----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~  243 (316)
T cd05619         178 DWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN----------P----CYPRWLTREAKDILVKLFVREPERRLGVKG  243 (316)
T ss_pred             hhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC----------C----CCCccCCHHHHHHHHHHhccCHhhcCCChH
Confidence            99999999999999999998866555544432211          0    01134678999999999999999999996 


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       244 ~l~~h~~~~  252 (316)
T cd05619         244 DIRQHPFFR  252 (316)
T ss_pred             HHHcCcccC
Confidence            899999985

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.2e-38  Score=251.54  Aligned_cols=218  Identities=17%  Similarity=0.211  Sum_probs=166.0

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .....+.+|+.+++.++||||+++++++..++..++|+||+++ +|.+++..                ....+++..+..
T Consensus        46 ~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~----------------~~~~~~~~~~~~  108 (301)
T cd07873          46 GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDD----------------CGNSINMHNVKL  108 (301)
T ss_pred             CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecccc-CHHHHHHh----------------cCCCCCHHHHHH
Confidence            3445678899999999999999999999999999999999984 88655531                134578889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||+.|++|+||||+||+++.        ||.+.......    ...+++.|+|||.+.+ ...++.++|
T Consensus       109 ~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~~D  187 (301)
T cd07873         109 FLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLG-STDYSTQID  187 (301)
T ss_pred             HHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhC-CCCCccHHH
Confidence            9999999999999999999999999999976        66554332211    2344889999999864 345788999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC------------CCCC----CCCCcccccHHHHHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA------------PNED----TTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~----~~~~~~~~~~~~~~li~  220 (245)
                      |||||+++|+|++|++||...+.......+............+            .+..    .......+++.+.++|.
T Consensus       188 v~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  267 (301)
T cd07873         188 MWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLS  267 (301)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHH
Confidence            9999999999999999998876655544443322111100000            0000    00112356888999999


Q ss_pred             HhcCCCCCCCccHHHHhhcccccc
Q 037274          221 ICLAPDPAKRPAAEAQVLQEMWHF  244 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~~~f~~  244 (245)
                      +||..||.+|||++++++||||+.
T Consensus       268 ~ml~~dp~~R~t~~eil~h~~f~~  291 (301)
T cd07873         268 KLLQFEGRKRISAEEAMKHPYFHC  291 (301)
T ss_pred             HHhcCCcccCcCHHHHhcCccccc
Confidence            999999999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=9.5e-39  Score=253.08  Aligned_cols=216  Identities=18%  Similarity=0.231  Sum_probs=164.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+.+|++++++++||||+++++++..++..++|+||+++ +|.+++..                ....+++..+..+
T Consensus        47 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----------------~~~~~~~~~~~~~  109 (309)
T cd07872          47 APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDD----------------CGNIMSMHNVKIF  109 (309)
T ss_pred             cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHh----------------cCCCCCHHHHHHH
Confidence            445678899999999999999999999999999999999985 77554431                1245788889999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||++|++||||||+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.++||
T Consensus       110 ~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di  188 (309)
T cd07872         110 LYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLG-SSEYSTQIDM  188 (309)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhC-CCCCCcHHHH
Confidence            999999999999999999999999999975        6765433221    12345889999999864 3457899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC--------------CCCCC--CCCCCCcccccHHHHHHHHH
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL--------------QVAPN--EDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~--~~~~~~~~~~~~~~~~li~~  221 (245)
                      ||||+++|+|++|+.||...+..+....+..........              ..+..  .........+++++.+++.+
T Consensus       189 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  268 (309)
T cd07872         189 WGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTK  268 (309)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHH
Confidence            999999999999999998876655554443322111100              00000  00001113467889999999


Q ss_pred             hcCCCCCCCccHHHHhhccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ||+.||.+|||+.++++||||+
T Consensus       269 ~L~~dp~~R~t~~e~l~h~~~~  290 (309)
T cd07872         269 FLQYESKKRISAEEAMKHAYFR  290 (309)
T ss_pred             hccCChhhCCCHHHHhcChhhh
Confidence            9999999999999999999996

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=2.6e-39  Score=258.53  Aligned_cols=208  Identities=17%  Similarity=0.197  Sum_probs=168.3

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.+++.++|+||+++++++.+++..++||||+++|+|.+++..                ....+++..+..
T Consensus        43 ~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~l~~~~~~~  106 (330)
T cd05601          43 ETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNR----------------YEDQFDEDMAQF  106 (330)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHH----------------hcCCCCHHHHHH
Confidence            4567788999999999999999999999999999999999999999777752                124688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCC----CCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFG----DDYY  151 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~----~~~~  151 (245)
                      ++.|++.||.|||+.|++||||||+||+++.        ||.+.......     ...+|+.|+|||.+...    ...+
T Consensus       107 ~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  186 (330)
T cd05601         107 YLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTY  186 (330)
T ss_pred             HHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCC
Confidence            9999999999999999999999999999976        66665433221     23568999999998631    2457


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|||||||++|+|++|..||...+.......+.....   ....+       ....++.++.+++.+||. +|.+||
T Consensus       187 ~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~-------~~~~~~~~~~~li~~ll~-~p~~R~  255 (330)
T cd05601         187 GVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR---FLKFP-------EDPKVSSDFLDLIQSLLC-GQKERL  255 (330)
T ss_pred             CCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC---ccCCC-------CCCCCCHHHHHHHHHHcc-ChhhCC
Confidence            8899999999999999999999988766655554443211   00111       113578899999999998 999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      +++++++||||.
T Consensus       256 t~~~l~~h~~~~  267 (330)
T cd05601         256 GYEGLCCHPFFS  267 (330)
T ss_pred             CHHHHhCCCCcC
Confidence            999999999985

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=4.4e-38  Score=246.19  Aligned_cols=211  Identities=24%  Similarity=0.377  Sum_probs=167.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+++++.++||||+++++++..++..++++||+++++|..++..                ....+++..+
T Consensus        42 ~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~----------------~~~~l~~~~~  105 (282)
T cd06643          42 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE----------------LERPLTEPQI  105 (282)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHh----------------cCCCCCHHHH
Confidence            345677899999999999999999999999999999999999999999665531                1346889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecC---CCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNF---GDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~---~~~~~  151 (245)
                      ..++.|++.||.|||+.|++|+||+|+||+++.        ||++.....    .....+++.|+|||.+..   ....+
T Consensus       106 ~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (282)
T cd06643         106 RVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY  185 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCC
Confidence            999999999999999999999999999999875        665543322    123446889999999852   12447


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|+|||||++|+|++|+.||...+..............    ..       ..+..++.++.+++.+||+.+|.+||
T Consensus       186 ~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (282)
T cd06643         186 DYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP----TL-------AQPSRWSSEFKDFLKKCLEKNVDARW  254 (282)
T ss_pred             CccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC----CC-------CCccccCHHHHHHHHHHccCChhhCc
Confidence            78999999999999999999999876554444333322110    00       01145788999999999999999999


Q ss_pred             cHHHHhhcccccc
Q 037274          232 AAEAQVLQEMWHF  244 (245)
Q Consensus       232 t~~~~l~~~~f~~  244 (245)
                      +++++++||||.-
T Consensus       255 ~~~~il~~~~~~~  267 (282)
T cd06643         255 TTTQLLQHPFVTV  267 (282)
T ss_pred             CHHHHhcCCCEec
Confidence            9999999999863

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.6e-39  Score=260.73  Aligned_cols=209  Identities=22%  Similarity=0.336  Sum_probs=172.6

Q ss_pred             cccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCce--eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ--LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~--~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      ++.++++..+.|..|+.+|+.|+||||+++|++|.+..+  ..+|+|.+..|+|..|.+.                 ...
T Consensus        77 d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk-----------------~~~  139 (632)
T KOG0584|consen   77 DVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKK-----------------HRR  139 (632)
T ss_pred             HhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHH-----------------hcc
Confidence            466788889999999999999999999999999988765  8899999999999766642                 356


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhC--CcccccCCCCceeccc---------ccCccccccCC--CCccccccccCceecCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGE--GLFHKNISAGHILHNI---------FNDDTRNWISS--SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~--~ivH~dlkp~nil~~~---------f~~~~~~~~~~--~~~~~~~y~aPE~~~~~  147 (245)
                      .+...+..|++||++||.|||++  .|+|||||.+||+++.         +|++.......  ...|||-|||||+..  
T Consensus       140 vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE--  217 (632)
T KOG0584|consen  140 VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE--  217 (632)
T ss_pred             CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccChHHHh--
Confidence            88889999999999999999998  4999999999999987         66655444333  346899999999997  


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                       ..|+..+||||||+.++||+|+..||........+.+.+........+           ...-.+++++||.+||.. .
T Consensus       218 -E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl-----------~kV~dPevr~fIekCl~~-~  284 (632)
T KOG0584|consen  218 -ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAAL-----------SKVKDPEVREFIEKCLAT-K  284 (632)
T ss_pred             -hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHh-----------hccCCHHHHHHHHHHhcC-c
Confidence             679999999999999999999999998766555444433332211111           123357999999999999 8


Q ss_pred             CCCccHHHHhhccccc
Q 037274          228 AKRPAAEAQVLQEMWH  243 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~f~  243 (245)
                      ..|||+.++|+||||.
T Consensus       285 ~~R~sa~eLL~d~Ff~  300 (632)
T KOG0584|consen  285 SERLSAKELLKDPFFD  300 (632)
T ss_pred             hhccCHHHHhhChhhc
Confidence            9999999999999996

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=3e-39  Score=262.48  Aligned_cols=204  Identities=16%  Similarity=0.166  Sum_probs=164.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+++.++|+||+++++.+.+++..++||||+++|+|.+++..                 ...+++..+..+
T Consensus        44 ~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-----------------~~~~~~~~~~~~  106 (376)
T cd05598          44 QAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-----------------LGIFEEDLARFY  106 (376)
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-----------------cCCCCHHHHHHH
Confidence            456788999999999999999999999999999999999999999777642                 345788889999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc---------------------------------
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI---------------------------------  128 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~---------------------------------  128 (245)
                      +.||+.||+|||+.||+||||||+||+++.        ||++.....                                 
T Consensus       107 ~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (376)
T cd05598         107 IAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLK  186 (376)
T ss_pred             HHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999999999875        776431100                                 


Q ss_pred             --------------CCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCc
Q 037274          129 --------------SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST  194 (245)
Q Consensus       129 --------------~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  194 (245)
                                    .....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||...+..+....+.....   
T Consensus       187 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~---  261 (376)
T cd05598         187 PLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR--TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWET---  261 (376)
T ss_pred             chhhhhhhhcccccccccCCCccccCHHHHcC--CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCc---
Confidence                          012357899999999986  6688999999999999999999999998766554444322111   


Q ss_pred             cCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---cHHHHhhccccc
Q 037274          195 SLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---AAEAQVLQEMWH  243 (245)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~~l~~~~f~  243 (245)
                      ....+       ....+++++.++|.+|+ .+|.+|+   +++++++||||.
T Consensus       262 ~~~~~-------~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~  305 (376)
T cd05598         262 TLHIP-------SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFK  305 (376)
T ss_pred             cccCC-------CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcC
Confidence            00111       11457889999999976 5999999   999999999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-40  Score=242.99  Aligned_cols=205  Identities=18%  Similarity=0.249  Sum_probs=165.5

Q ss_pred             HHHHHHHHHHHhhC-CCCCeeeEEEEEEeC----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274           11 YAKLAREIYRYKHL-SHPNIIPIYKTMISQ----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus        11 ~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+..+|+++.-.. .|||||.+++.+++.    ..+.+|||.++||.|               ...+..++...+++.+
T Consensus        98 s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeL---------------fsriq~~g~~afTEre  162 (400)
T KOG0604|consen   98 SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGEL---------------FSRIQDRGDQAFTERE  162 (400)
T ss_pred             CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHH---------------HHHHHHcccccchHHH
Confidence            35667888876665 599999999998653    358999999999999               4444455567799999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..|++||+.|+.|||+.+|.||||||+|+|.+.           ||+++......   +.+.||.|.|||++..  ..|
T Consensus       163 a~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~--eKy  240 (400)
T KOG0604|consen  163 ASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGP--EKY  240 (400)
T ss_pred             HHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCc--hhc
Confidence            9999999999999999999999999999999875           99988776433   4556999999999965  679


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchH----HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLD----IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      +...|+||+||++|-|++|.+||.......    +..++....   .  ..+.+     ....+|+..+++|+.+|..+|
T Consensus       241 dkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq---y--~FP~p-----EWs~VSe~aKdlIR~LLkt~P  310 (400)
T KOG0604|consen  241 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ---Y--EFPEP-----EWSCVSEAAKDLIRKLLKTEP  310 (400)
T ss_pred             CCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC---c--cCCCh-----hHhHHHHHHHHHHHHHhcCCc
Confidence            999999999999999999999998765432    222222221   1  11111     126678999999999999999


Q ss_pred             CCCccHHHHhhcccc
Q 037274          228 AKRPAAEAQVLQEMW  242 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~f  242 (245)
                      ++|.|+++++.|||-
T Consensus       311 teRlTI~~~m~hpwi  325 (400)
T KOG0604|consen  311 TERLTIEEVMDHPWI  325 (400)
T ss_pred             hhheeHHHhhcCchh
Confidence            999999999999994

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.1e-38  Score=253.34  Aligned_cols=202  Identities=18%  Similarity=0.238  Sum_probs=163.5

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+.+..|..++..+ +||||+++++++..++..++||||+++|+|.+++..                 ...+++..+.
T Consensus        37 ~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~-----------------~~~~~~~~~~   99 (316)
T cd05592          37 DDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQS-----------------SGRFDEARAR   99 (316)
T ss_pred             hhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHH-----------------cCCCCHHHHH
Confidence            3455566777777654 799999999999999999999999999999665542                 3458889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||+.|++||||||+||+++.        ||++.....    .....+|+.|+|||.+.+  ..++.++
T Consensus       100 ~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  177 (316)
T cd05592         100 FYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKG--QKYNESV  177 (316)
T ss_pred             HHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcC--CCCCCcc
Confidence            99999999999999999999999999999875        776653321    123456999999999987  5689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH-H
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA-E  234 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-~  234 (245)
                      |||||||++|+|++|..||.+.+.......+.....              ..+..++.++.+++.+||+.||.+||++ +
T Consensus       178 DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~--------------~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~  243 (316)
T cd05592         178 DWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRP--------------HFPRWISKEAKDCLSKLFERDPTKRLGVDG  243 (316)
T ss_pred             cchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------------CCCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence            999999999999999999998766555544432110              1114578899999999999999999986 5


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       244 ~l~~h~~~~  252 (316)
T cd05592         244 DIRQHPFFR  252 (316)
T ss_pred             HHHcCcccC
Confidence            788999985

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-39  Score=259.58  Aligned_cols=197  Identities=24%  Similarity=0.308  Sum_probs=164.9

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      +.-..+|..|++|+|+||+.+.|.|.....+|||||||..|-|+.+++.                 +..++...+..+..
T Consensus       157 elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka-----------------~~~itp~llv~Wsk  219 (904)
T KOG4721|consen  157 ELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKA-----------------GRPITPSLLVDWSK  219 (904)
T ss_pred             hhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhc-----------------cCccCHHHHHHHHH
Confidence            3345688999999999999999999999999999999999999887764                 45677888889999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCCchhhHHHH
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      +|+.|+.|||.+.|+|||||..||||+-        ||.++.....+   .++||..|||||++..  ...+.|+|||||
T Consensus       220 ~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrn--ePcsEKVDIwSf  297 (904)
T KOG4721|consen  220 GIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRN--EPCSEKVDIWSF  297 (904)
T ss_pred             HhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhc--CCcccccceehh
Confidence            9999999999999999999999999875        88877665544   4678999999999986  789999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ||+||||+||..||.+-+....     -...+......+.       +..+++.+.-|++.||+..|..||++.+++.|
T Consensus       298 GVVLWEmLT~EiPYkdVdssAI-----IwGVGsNsL~Lpv-------PstcP~GfklL~Kqcw~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  298 GVVLWEMLTGEIPYKDVDSSAI-----IWGVGSNSLHLPV-------PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH  364 (904)
T ss_pred             HHHHHHHHhcCCCccccchhee-----EEeccCCcccccC-------cccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence            9999999999999987332221     1122222222222       27789999999999999999999999999988

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=5e-39  Score=259.65  Aligned_cols=205  Identities=16%  Similarity=0.188  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++.+++|+||+++++.+.+++..++||||+++|+|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~l~~~~~~~  105 (360)
T cd05627          43 EQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK-----------------KDTLSEEATQF  105 (360)
T ss_pred             hhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh-----------------cCCCCHHHHHH
Confidence            4566788999999999999999999999999999999999999999776642                 34588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------------------------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------------------------------  129 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------------------------------  129 (245)
                      ++.|++.||.|||+.|++||||||+||+++.        ||++......                               
T Consensus       106 ~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (360)
T cd05627         106 YIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETW  185 (360)
T ss_pred             HHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccc
Confidence            9999999999999999999999999999975        7765432110                               


Q ss_pred             --------CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCC
Q 037274          130 --------SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPN  201 (245)
Q Consensus       130 --------~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (245)
                              ....||+.|+|||++.+  ..++.++|+|||||++|+|++|..||...+.......+...... .  ..+. 
T Consensus       186 ~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~-~--~~p~-  259 (360)
T cd05627         186 KKNRRQLAYSTVGTPDYIAPEVFMQ--TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKET-L--VFPP-  259 (360)
T ss_pred             cccccccccccCCCccccCHHHHcC--CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCc-e--ecCC-
Confidence                    12357999999999987  66889999999999999999999999887766655554432110 0  1111 


Q ss_pred             CCCCCCcccccHHHHHHHHHhcCCCCCCCc---cHHHHhhccccc
Q 037274          202 EDTTHGTRTLSKNFWNMVKICLAPDPAKRP---AAEAQVLQEMWH  243 (245)
Q Consensus       202 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~~l~~~~f~  243 (245)
                            ...+++++.++|.+|+. ||.+|+   +++++++||||.
T Consensus       260 ------~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~  297 (360)
T cd05627         260 ------EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFE  297 (360)
T ss_pred             ------CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCC
Confidence                  13478899999999875 999998   479999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.6e-38  Score=244.77  Aligned_cols=202  Identities=24%  Similarity=0.312  Sum_probs=163.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++||||+++++++..++..++++||+++++|.+++..                 ...+++..+..
T Consensus        48 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~  110 (267)
T cd06628          48 SMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNN-----------------YGAFEETLVRN  110 (267)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHh-----------------ccCccHHHHHH
Confidence            3457789999999999999999999999999999999999999999777642                 24578888999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----------CCCccccccccCceecCCCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----------SSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ++.|++.||.|||++|++|+||+|+||+++.        ||.+......          ....++..|+|||.+.+  ..
T Consensus       111 ~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--~~  188 (267)
T cd06628         111 FVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ--TS  188 (267)
T ss_pred             HHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhcc--CC
Confidence            9999999999999999999999999999876        5554433211          12235788999999986  55


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      ++.++|+||||+++|++++|..||...+............    .         ...+...+..+.+++++||+.||.+|
T Consensus       189 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~---------~~~~~~~~~~~~~li~~~l~~~p~~R  255 (267)
T cd06628         189 YTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA----S---------PEIPSNISSEAIDFLEKTFEIDHNKR  255 (267)
T ss_pred             CCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC----C---------CcCCcccCHHHHHHHHHHccCCchhC
Confidence            7899999999999999999999998755443333222110    0         01114578899999999999999999


Q ss_pred             ccHHHHhhcccc
Q 037274          231 PAAEAQVLQEMW  242 (245)
Q Consensus       231 pt~~~~l~~~~f  242 (245)
                      |++.++++||||
T Consensus       256 p~~~~il~~~~~  267 (267)
T cd06628         256 PTAAELLKHPFL  267 (267)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.1e-38  Score=254.51  Aligned_cols=207  Identities=16%  Similarity=0.224  Sum_probs=162.0

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+..+.+..|+.++.++ +||||+++++++..++..++||||+++|+|..++..                 ...+++..+
T Consensus        36 ~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-----------------~~~l~~~~~   98 (329)
T cd05618          36 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-----------------QRKLPEEHA   98 (329)
T ss_pred             hhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHH-----------------cCCCCHHHH
Confidence            34566788999988877 799999999999999999999999999999655531                 346889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||.|||++|++||||||+||+++.        ||++.....    .....+|+.|+|||.+.+  ..++.+
T Consensus        99 ~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  176 (329)
T cd05618          99 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG--EDYGFS  176 (329)
T ss_pred             HHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcC--CCCCCc
Confidence            999999999999999999999999999999975        776653221    123456899999999987  568899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCc-----hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQD-----LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      +|+|||||++|+|++|..||.....     ............. ...         ..+...+..+.+++.+||+.||.+
T Consensus       177 ~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~-~~~---------~~p~~~~~~~~~ll~~~L~~dP~~  246 (329)
T cd05618         177 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQI---------RIPRSLSVKAASVLKSFLNKDPKE  246 (329)
T ss_pred             cceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc-CCC---------CCCCCCCHHHHHHHHHHhcCCHHH
Confidence            9999999999999999999953111     0111111111100 000         112557889999999999999999


Q ss_pred             Ccc------HHHHhhccccc
Q 037274          230 RPA------AEAQVLQEMWH  243 (245)
Q Consensus       230 Rpt------~~~~l~~~~f~  243 (245)
                      ||+      ++++++||||+
T Consensus       247 R~~~~~~~~~~~i~~hp~f~  266 (329)
T cd05618         247 RLGCHPQTGFADIQGHPFFR  266 (329)
T ss_pred             cCCCCCCCCHHHHhcCCCCC
Confidence            998      58999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=8.9e-39  Score=254.64  Aligned_cols=200  Identities=18%  Similarity=0.184  Sum_probs=162.2

Q ss_pred             HHHHHHHHH-HHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           11 YAKLAREIY-RYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        11 ~~~~~~E~~-~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      .+.+..|.. +++.++||||+++++.+...+..++||||+++|+|.+++..                 ...+++..+..+
T Consensus        39 ~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----------------~~~~~~~~~~~~  101 (323)
T cd05575          39 QKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQR-----------------ERSFPEPRARFY  101 (323)
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHh-----------------cCCCCHHHHHHH
Confidence            345555655 56789999999999999999999999999999999665542                 346788899999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.||+.||.|||++|++||||||+|||++.        ||++.....    .....+++.|+|||.+.+  ..++.++||
T Consensus       102 ~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv  179 (323)
T cd05575         102 AAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRK--QPYDRTVDW  179 (323)
T ss_pred             HHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcC--CCCCccccc
Confidence            999999999999999999999999999975        776543221    113456899999999987  568899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH----
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA----  233 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~----  233 (245)
                      |||||++|+|++|..||...+.......+.....     .         .....+..+.+++.+||+.||.+||++    
T Consensus       180 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (323)
T cd05575         180 WCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL-----R---------LKPNISVSARHLLEGLLQKDRTKRLGAKDDF  245 (323)
T ss_pred             cccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-----C---------CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCH
Confidence            9999999999999999998766555554433210     0         113468899999999999999999987    


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      .++++||||.
T Consensus       246 ~~il~~~~~~  255 (323)
T cd05575         246 LEIKNHVFFS  255 (323)
T ss_pred             HHHHcCCCcC
Confidence            6999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=5.1e-38  Score=248.75  Aligned_cols=217  Identities=19%  Similarity=0.309  Sum_probs=165.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+++.+|++++++++||||+++++++..++..++++||+++++|.+++..                 ...+++..+
T Consensus        39 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~-----------------~~~~~~~~~  101 (308)
T cd06615          39 KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-----------------AGRIPENIL  101 (308)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHh-----------------cCCCCHHHH
Confidence            345567799999999999999999999999999999999999999999777652                 245788999


Q ss_pred             HHHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCcccccc--CCCCccccccccCceecCCCCCCCchh
Q 037274           87 AIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWI--SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ..++.|++.||.|||+ .+++|+||+|+||+++.        ||.+.....  .....+++.|+|||.+.+  ..++.++
T Consensus       102 ~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~  179 (308)
T cd06615         102 GKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG--THYTVQS  179 (308)
T ss_pred             HHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChhHhcC--CCCCccc
Confidence            9999999999999998 58999999999999975        555443221  123456889999999876  5588999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC-------------------------CCCCCCCCccc
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA-------------------------PNEDTTHGTRT  210 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~  210 (245)
                      |+||||+++|++++|+.||...+...... ..............                         ...........
T Consensus       180 DiwslG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (308)
T cd06615         180 DIWSLGLSLVEMAIGRYPIPPPDAKELEA-MFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGA  258 (308)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcchhhHHH-hhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcc
Confidence            99999999999999999997654332222 11111100000000                         00000011123


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++.++.+++.+||..+|++|||+.++++||||.
T Consensus       259 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~  291 (308)
T cd06615         259 FSDEFQDFVDKCLKKNPKERADLKELTKHPFIK  291 (308)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence            678899999999999999999999999999985

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=2.2e-38  Score=252.54  Aligned_cols=203  Identities=16%  Similarity=0.220  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHHHHhhCCCC-CeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHP-NIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~-~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+..+.+..|++++..++|+ +|+++++++...+..++||||+++|+|.+++..                 ...+++..+
T Consensus        41 ~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-----------------~~~~~~~~~  103 (324)
T cd05587          41 DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-----------------VGKFKEPHA  103 (324)
T ss_pred             hhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHH-----------------cCCCCHHHH
Confidence            34567788999999999765 688899999989999999999999999766642                 345788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||.|||+.|++||||||+|||++.        ||++.....    .....|++.|+|||++.+  ..++.+
T Consensus       104 ~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  181 (324)
T cd05587         104 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAY--QPYGKS  181 (324)
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcC--CCCCcc
Confidence            999999999999999999999999999999975        776543211    113456899999999987  568899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH-
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA-  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-  233 (245)
                      +|+|||||++|+|++|+.||.+.+.......+....       .       ..+..+++++.+++.+||..||.+|++. 
T Consensus       182 ~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~-------~-------~~~~~~~~~~~~li~~~l~~~P~~R~~~~  247 (324)
T cd05587         182 VDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN-------V-------SYPKSLSKEAVSICKGLLTKHPAKRLGCG  247 (324)
T ss_pred             cchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------C-------CCCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence            999999999999999999998877666555543221       0       1114578899999999999999999986 


Q ss_pred             ----HHHhhccccc
Q 037274          234 ----EAQVLQEMWH  243 (245)
Q Consensus       234 ----~~~l~~~~f~  243 (245)
                          +++++||||.
T Consensus       248 ~~~~~~~~~hp~~~  261 (324)
T cd05587         248 PTGERDIREHAFFR  261 (324)
T ss_pred             CCCHHHHhcCCCcC
Confidence                8999999985

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=6e-38  Score=251.48  Aligned_cols=217  Identities=18%  Similarity=0.272  Sum_probs=160.8

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeC-ceeEEEeeecccCCHHHHHhcCCCCCh-------hhHHH-------
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQ-RQLFYAEIACMIGSLDSIMTYRPLNSP-------AATQL-------   71 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~-------~~~~~-------   71 (245)
                      .+..+.+.+|+.+++++ +||||+++++++... +..+++|||+++|+|.+++........       .....       
T Consensus        51 ~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (338)
T cd05102          51 ASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQ  130 (338)
T ss_pred             hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhh
Confidence            44567899999999999 899999999988764 458999999999999998874321100       00000       


Q ss_pred             -------------------------------HhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-
Q 037274           72 -------------------------------IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-  119 (245)
Q Consensus        72 -------------------------------~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-  119 (245)
                                                     .........+++..+..++.|++.||+|||+.|++||||||+||+++. 
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~  210 (338)
T cd05102         131 SRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN  210 (338)
T ss_pred             hccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC
Confidence                                           000001245788899999999999999999999999999999999975 


Q ss_pred             -------ccCccccccCC------CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHH
Q 037274          120 -------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTK  185 (245)
Q Consensus       120 -------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~  185 (245)
                             ||++.......      ...+++.|+|||.+.+  ..++.++||||||+++|+|++ |..||.+.........
T Consensus       211 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~  288 (338)
T cd05102         211 NVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFD--KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ  288 (338)
T ss_pred             CcEEEeecccccccccCcchhcccCCCCCccccCcHHhhc--CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHH
Confidence                   77765432211      2223578999999986  568999999999999999997 9999987554333322


Q ss_pred             HHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          186 MLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      ......   .         ...+...++.+.+++.+||+.||.+|||+.++++
T Consensus       289 ~~~~~~---~---------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         289 RLKDGT---R---------MRAPENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             HHhcCC---C---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            222110   0         0112457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=4.7e-38  Score=251.05  Aligned_cols=222  Identities=25%  Similarity=0.363  Sum_probs=163.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.+++.++||||+++++++..++..++++|++.+++|.+++..               .....+++..+
T Consensus        39 ~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~---------------~~~~~~~~~~~  103 (328)
T cd08226          39 TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKT---------------YFPEGMSEALI  103 (328)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHh---------------hcccCCCHHHH
Confidence            345568899999999999999999999999999999999999999999776652               12245888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceecccccCcccccc-------------------CCCCccccccccCceecCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWI-------------------SSSSSITTWAAAPEVVNFG  147 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~f~~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~  147 (245)
                      ..++.|++.||+|||++|++||||||+||+++.-+..+....                   .....++..|+|||.+.++
T Consensus       104 ~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (328)
T cd08226         104 GNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQD  183 (328)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCC
Confidence            999999999999999999999999999999886221110000                   0011235679999999764


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc--------------------------------
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS--------------------------------  195 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------------  195 (245)
                      ...++.++|||||||++|++++|+.||.....................                                
T Consensus       184 ~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (328)
T cd08226         184 LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGM  263 (328)
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcccc
Confidence            345789999999999999999999999875443332222211100000                                


Q ss_pred             -CCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          196 -LQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       196 -~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                       ...............++..+.+++++||+.||++|||++++++||||.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~  312 (328)
T cd08226         264 TQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK  312 (328)
T ss_pred             ccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence             000000011111244678899999999999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=8.7e-39  Score=254.19  Aligned_cols=222  Identities=18%  Similarity=0.253  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+|++++++++||||+++++.+..  +...++++|++.+ +|.+++......        ........+++..+..
T Consensus        42 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~--------~~~~~~~~l~~~~~~~  112 (317)
T cd07868          42 SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRAS--------KANKKPVQLPRGMVKS  112 (317)
T ss_pred             cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccc--------cccCCcccCCHHHHHH
Confidence            3457889999999999999999998854  4568999999875 887766532110        0011234588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceecc------------cccCccccccC-------CCCccccccccCceecCCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHN------------IFNDDTRNWIS-------SSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~------------~f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~  149 (245)
                      ++.|++.||.|||++|++||||||+|||+.            +||.+......       ....+|+.|+|||.+.+ ..
T Consensus       113 i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~  191 (317)
T cd07868         113 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG-AR  191 (317)
T ss_pred             HHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcC-CC
Confidence            999999999999999999999999999983            27776543321       13455889999999875 34


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCch---------HHHHHHHhcCCCCccC------CCC------------CC-
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDL---------DIMTKMLMKQPKSTSL------QVA------------PN-  201 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~~------~~~------------~~-  201 (245)
                      .++.++|+||+||++|+|++|++||......         .....+..........      ..+            .. 
T Consensus       192 ~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (317)
T cd07868         192 HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT  271 (317)
T ss_pred             CcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccC
Confidence            5789999999999999999999999754321         1112221111000000      000            00 


Q ss_pred             -----CCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          202 -----EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       202 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                           ..........+..+.+++.+||+.||.+|||++++++||||
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         272 NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             cccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                 00000012335678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=4.2e-38  Score=242.83  Aligned_cols=204  Identities=29%  Similarity=0.423  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++|+||+++++.+..+...++++|++.+++|.+++..                ....+++..+..+
T Consensus        41 ~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~----------------~~~~l~~~~~~~~  104 (256)
T cd06612          41 DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKI----------------TNKTLTEEEIAAI  104 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHh----------------CccCCCHHHHHHH
Confidence            378899999999999999999999999999999999999999999777642                1356889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||+.|++|+||+|+||+++.        ||.+.......    ...++..|+|||.+.+  ..++.++||
T Consensus       105 ~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~Di  182 (256)
T cd06612         105 LYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQE--IGYNNKADI  182 (256)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhc--CCCCchhhH
Confidence            999999999999999999999999999976        55544333221    2335788999999886  568899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|+|++|+.||................         .  .....+..++.++.+++.+||+.+|.+|||+.+++
T Consensus       183 ~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il  251 (256)
T cd06612         183 WSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKP---------P--PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLL  251 (256)
T ss_pred             HHHHHHHHHHHhCCCCCCCcchhhhhhhhccCC---------C--CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHh
Confidence            999999999999999998754433222111100         0  00111245678999999999999999999999999


Q ss_pred             hcccc
Q 037274          238 LQEMW  242 (245)
Q Consensus       238 ~~~~f  242 (245)
                      .||||
T Consensus       252 ~~~~~  256 (256)
T cd06612         252 QHPFI  256 (256)
T ss_pred             cCCCC
Confidence            99997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-39  Score=260.40  Aligned_cols=211  Identities=25%  Similarity=0.392  Sum_probs=176.0

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ++.+..+++.-||.+|..+.||+||++++.|..++.+|++.|||.||.++.++-               . ....+++.+
T Consensus        68 kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaiml---------------E-L~r~LtE~Q  131 (1187)
T KOG0579|consen   68 KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIML---------------E-LGRVLTEDQ  131 (1187)
T ss_pred             cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHH---------------H-hccccchHH
Confidence            467788999999999999999999999999999999999999999999955442               2 357799999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecC---CCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNF---GDDY  150 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~---~~~~  150 (245)
                      |..+++|++.||.|||+++|+|||||+.|||++.        ||.+.....    ...+.|||.|||||++..   ...+
T Consensus       132 Iqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~P  211 (1187)
T KOG0579|consen  132 IQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQP  211 (1187)
T ss_pred             HHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCC
Confidence            9999999999999999999999999999999886        776543322    236788999999998764   2457


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      |+.++||||||+.|.+|..+.+|-..-+....+-.+....         ++..  ..+..++..+.+++.+||..||..|
T Consensus       212 YDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe---------PPTL--lqPS~Ws~~F~DfLk~cL~Knp~~R  280 (1187)
T KOG0579|consen  212 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE---------PPTL--LQPSHWSRSFSDFLKRCLVKNPRNR  280 (1187)
T ss_pred             chhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC---------CCcc--cCcchhhhHHHHHHHHHHhcCCccC
Confidence            8999999999999999999999988766555444433222         1111  1127788999999999999999999


Q ss_pred             ccHHHHhhccccc
Q 037274          231 PAAEAQVLQEMWH  243 (245)
Q Consensus       231 pt~~~~l~~~~f~  243 (245)
                      |+++++++||||.
T Consensus       281 p~aaqll~Hpfv~  293 (1187)
T KOG0579|consen  281 PPAAQLLKHPFVQ  293 (1187)
T ss_pred             CCHHHHhhCcccc
Confidence            9999999999985

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=4.7e-38  Score=247.60  Aligned_cols=204  Identities=23%  Similarity=0.329  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.+++.+.|+||+++++.+..++..++|+||+++++|.+++.                  ...+++..+..
T Consensus        59 ~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~------------------~~~~~~~~~~~  120 (296)
T cd06654          59 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT------------------ETCMDEGQIAA  120 (296)
T ss_pred             chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH------------------hcCCCHHHHHH
Confidence            345778999999999999999999999999999999999999999977664                  23467888999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||+.|++|+||||+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.++|
T Consensus       121 i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  198 (296)
T cd06654         121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--KAYGPKVD  198 (296)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcC--CCCCccch
Confidence            9999999999999999999999999999975        6654432221    12356889999999986  55789999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      +|||||++|+|++|+.||...+............    ...       ...+..++..+.+++.+||..+|.+|||+.++
T Consensus       199 v~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ei  267 (296)
T cd06654         199 IWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG----TPE-------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL  267 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCC----CCC-------CCCccccCHHHHHHHHHHCcCCcccCcCHHHH
Confidence            9999999999999999998755433322211110    000       01124577889999999999999999999999


Q ss_pred             hhccccc
Q 037274          237 VLQEMWH  243 (245)
Q Consensus       237 l~~~~f~  243 (245)
                      ++||||.
T Consensus       268 l~~~~~~  274 (296)
T cd06654         268 LQHQFLK  274 (296)
T ss_pred             hhChhhh
Confidence            9999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=8e-38  Score=242.58  Aligned_cols=205  Identities=25%  Similarity=0.331  Sum_probs=164.4

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|++++++++|+||+++++++.+.+..++++||+++++|.+++..                 ...+++..+.
T Consensus        43 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~  105 (265)
T cd06631          43 EKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNR-----------------FGPLPEPVFC  105 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHh-----------------cCCCCHHHHH
Confidence            34567799999999999999999999999999999999999999999777642                 2357888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----------CCCCccccccccCceecCCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----------SSSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~  149 (245)
                      .++.|++.||+|||+.|++|+||+|+||+++.        ||.+.....          .....++..|+|||.+.+  .
T Consensus       106 ~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~  183 (265)
T cd06631         106 KYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE--S  183 (265)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcC--C
Confidence            99999999999999999999999999999975        554433211          112345788999999986  5


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      .++.++|+||||+++|++++|..||...+.............     ..      ...+..++.++.+++.+||+.+|.+
T Consensus       184 ~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~~~i~~~l~~~p~~  252 (265)
T cd06631         184 GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG-----LM------PRLPDSFSAAAIDFVTSCLTRDQHE  252 (265)
T ss_pred             CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC-----CC------CCCCCCCCHHHHHHHHHHhcCCccc
Confidence            688999999999999999999999987544333222211100     00      0112557899999999999999999


Q ss_pred             CccHHHHhhcccc
Q 037274          230 RPAAEAQVLQEMW  242 (245)
Q Consensus       230 Rpt~~~~l~~~~f  242 (245)
                      ||++.++++||||
T Consensus       253 Rp~~~~~l~~~~~  265 (265)
T cd06631         253 RPSALQLLRHDFL  265 (265)
T ss_pred             CCCHHHHhcCCCC
Confidence            9999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=7.7e-38  Score=241.38  Aligned_cols=204  Identities=17%  Similarity=0.236  Sum_probs=166.6

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|++++++++||||+++++++..++..++++||+++++|.+++..               .....+++..++
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------~~~~~~~~~~~~  104 (256)
T cd08529          40 RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKM---------------QRGRPLPEDQVW  104 (256)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHH---------------hcCCCCCHHHHH
Confidence            45677899999999999999999999999999999999999999999777652               123568889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||.+.......    ...+++.|+|||+..+  ..++.++
T Consensus       105 ~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~  182 (256)
T cd08529         105 RFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCED--KPYNEKS  182 (256)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcC--CCCCCcc
Confidence            99999999999999999999999999999886        55544332211    2345788999999987  5588999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||||+++++|++|+.||...+.............       +      .....++..+.+++.+||+.+|++||++.+
T Consensus       183 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~  249 (256)
T cd08529         183 DVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF-------P------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQ  249 (256)
T ss_pred             chHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-------C------CCccccCHHHHHHHHHHccCCcccCcCHHH
Confidence            999999999999999999987665444433322110       0      111357789999999999999999999999


Q ss_pred             Hhhccc
Q 037274          236 QVLQEM  241 (245)
Q Consensus       236 ~l~~~~  241 (245)
                      +++|||
T Consensus       250 ll~~~~  255 (256)
T cd08529         250 LLRNPS  255 (256)
T ss_pred             HhhCCC
Confidence            999998

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=2.7e-38  Score=252.14  Aligned_cols=207  Identities=16%  Similarity=0.201  Sum_probs=162.8

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+..+.+..|+.++.++ +||||+++++++...+..++||||+++|+|..++..                 ...+++..+
T Consensus        36 ~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~l~~~~~   98 (327)
T cd05617          36 DEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQR-----------------QRKLPEEHA   98 (327)
T ss_pred             hhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHHH
Confidence            34566788999999888 599999999999999999999999999999665542                 346889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||+|||++|++||||||+||+++.        ||++.....    .....+|+.|+|||.+.+  ..++.+
T Consensus        99 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  176 (327)
T cd05617          99 RFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG--EEYGFS  176 (327)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCC--CCCCch
Confidence            999999999999999999999999999999975        776653221    123457999999999987  668999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCch---HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDL---DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +|+||||+++|+|++|..||......   .............   ..       ..+...+..+.+++.+||+.||.+|+
T Consensus       177 ~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~-------~~p~~~~~~~~~li~~~L~~dP~~R~  246 (327)
T cd05617         177 VDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK---PI-------RIPRFLSVKASHVLKGFLNKDPKERL  246 (327)
T ss_pred             heeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC---CC-------CCCCCCCHHHHHHHHHHhccCHHHcC
Confidence            99999999999999999999642211   1111111111000   00       11245788999999999999999999


Q ss_pred             c------HHHHhhccccc
Q 037274          232 A------AEAQVLQEMWH  243 (245)
Q Consensus       232 t------~~~~l~~~~f~  243 (245)
                      +      ++++++||||.
T Consensus       247 ~~~~~~~~~~i~~h~~f~  264 (327)
T cd05617         247 GCQPQTGFSDIKSHTFFR  264 (327)
T ss_pred             CCCCCCCHHHHHcCCCCC
Confidence            7      57999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=5.3e-38  Score=247.26  Aligned_cols=205  Identities=24%  Similarity=0.351  Sum_probs=166.4

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.+++.++||||+++++++..++..++|+||+++++|.+++.                  ...+++..+..
T Consensus        58 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~------------------~~~l~~~~~~~  119 (296)
T cd06655          58 PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVT------------------ETCMDEAQIAA  119 (296)
T ss_pred             chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHH------------------hcCCCHHHHHH
Confidence            345778999999999999999999999999999999999999999976654                  23578899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.|+++||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.++|
T Consensus       120 i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  197 (296)
T cd06655         120 VCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--KAYGPKVD  197 (296)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcC--CCCCchhh
Confidence            9999999999999999999999999999975        5554433221    12345789999999986  55889999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      +|||||++|++++|..||...+..............    .       ...+..+++.+.++|.+||..||.+||++.++
T Consensus       198 v~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~i  266 (296)
T cd06655         198 IWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP----E-------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKEL  266 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc----c-------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHH
Confidence            999999999999999999886654443332221100    0       01125578899999999999999999999999


Q ss_pred             hhcccccc
Q 037274          237 VLQEMWHF  244 (245)
Q Consensus       237 l~~~~f~~  244 (245)
                      ++||||.-
T Consensus       267 l~~~~~~~  274 (296)
T cd06655         267 LQHPFLKL  274 (296)
T ss_pred             hhChHhhh
Confidence            99999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=2.3e-38  Score=256.28  Aligned_cols=206  Identities=17%  Similarity=0.263  Sum_probs=165.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+++.++||||+++++.+.+++..++||||+++|+|.+++.                  ...+++..+..+
T Consensus        86 ~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~------------------~~~~~~~~~~~~  147 (371)
T cd05622          86 DSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS------------------NYDVPEKWARFY  147 (371)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHH------------------hcCCCHHHHHHH
Confidence            45567889999999999999999999999999999999999999977664                  234778888999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----CCCccccccccCceecCC--CCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----SSSSITTWAAAPEVVNFG--DDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~~--~~~~~~~  154 (245)
                      +.|++.||.|||++|++||||||+||+++.        ||++......     ....||+.|+|||++...  ...++.+
T Consensus       148 ~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~  227 (371)
T cd05622         148 TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE  227 (371)
T ss_pred             HHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCc
Confidence            999999999999999999999999999975        7776543321     234579999999998752  1237899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC--Ccc
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK--RPA  232 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rpt  232 (245)
                      +|||||||++|+|++|..||...+.......+......   ...+.       ...++..+.++|..||..++.+  |++
T Consensus       228 ~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~---~~~~~-------~~~~s~~~~~li~~~L~~~~~r~~r~~  297 (371)
T cd05622         228 CDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS---LTFPD-------DNDISKEAKNLICAFLTDREVRLGRNG  297 (371)
T ss_pred             cceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCc---ccCCC-------cCCCCHHHHHHHHHHcCChhhhcCCCC
Confidence            99999999999999999999987766665555432210   11111       1457899999999999844443  789


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++|+||.
T Consensus       298 ~~ei~~h~~~~  308 (371)
T cd05622         298 VEEIKRHLFFK  308 (371)
T ss_pred             HHHHhcCcccC
Confidence            99999999984

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=7.7e-38  Score=244.48  Aligned_cols=206  Identities=22%  Similarity=0.322  Sum_probs=161.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|++++++++||||+++++++..++..++++||+++++|..+                     ..+++..+
T Consensus        39 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~---------------------~~~~~~~~   97 (279)
T cd06619          39 TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY---------------------RKIPEHVL   97 (279)
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh---------------------hcCCHHHH
Confidence            455667899999999999999999999999999999999999999998332                     23577888


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC--CCCccccccccCceecCCCCCCCchhh
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ..++.|++.||.|||+.|++|+||||+||+++.        ||++......  ....++..|+|||.+.+  ..++.++|
T Consensus        98 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  175 (279)
T cd06619          98 GRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISG--EQYGIHSD  175 (279)
T ss_pred             HHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCceeecC--CCCCCcch
Confidence            899999999999999999999999999999976        6666543222  23456889999999987  56899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchH---HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLD---IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +||||+++|+|++|+.||.......   .............     ..   .......++++.+++.+||+.+|.+||++
T Consensus       176 vwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~li~~~l~~~P~~Rp~~  247 (279)
T cd06619         176 VWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PP---VLPVGQFSEKFVHFITQCMRKQPKERPAP  247 (279)
T ss_pred             HHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CC---CCCCCcCCHHHHHHHHHHhhCChhhCCCH
Confidence            9999999999999999997532211   0011111110000     00   01114467899999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      +++++||||.
T Consensus       248 ~eil~~~~~~  257 (279)
T cd06619         248 ENLMDHPFIV  257 (279)
T ss_pred             HHHhcCcccc
Confidence            9999999986

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=2.9e-38  Score=247.52  Aligned_cols=208  Identities=16%  Similarity=0.141  Sum_probs=164.4

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++|++|+++++.+.+++..+++|||+++++|.+++..               .....+++..+..
T Consensus        42 ~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~---------------~~~~~l~~~~~~~  106 (285)
T cd05630          42 KGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH---------------MGEAGFEEGRAVF  106 (285)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHH---------------hcccCCCHHHHHH
Confidence            3445678899999999999999999999999999999999999999766532               1234588899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCCchhhH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      ++.|++.||.|||+.|++|+||||+||+++.        ||.+.......   ...+++.|+|||.+.+  ..++.++|+
T Consensus       107 ~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Di  184 (285)
T cd05630         107 YAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN--ERYTFSPDW  184 (285)
T ss_pred             HHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcC--CCCCCcccc
Confidence            9999999999999999999999999999875        66654332221   2356889999999987  568999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----  232 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----  232 (245)
                      ||||+++|+|++|..||................. ..  .       ...+..+++++.+++.+||+.||.+|||     
T Consensus       185 wslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~-~~--~-------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~  254 (285)
T cd05630         185 WALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK-EV--Q-------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGG  254 (285)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh-hh--h-------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCc
Confidence            9999999999999999987543221111111100 00  0       0112457889999999999999999999     


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       255 ~~~~~~h~~~~  265 (285)
T cd05630         255 AREVKEHPLFK  265 (285)
T ss_pred             hHHHHcChhhh
Confidence            89999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=4.9e-38  Score=249.58  Aligned_cols=222  Identities=25%  Similarity=0.392  Sum_probs=165.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+++++.++|+||+++++++..++..++++||+++++|.+++..               .....+++..+
T Consensus        39 ~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~---------------~~~~~~~~~~~  103 (314)
T cd08216          39 SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKT---------------HFPEGLPELAI  103 (314)
T ss_pred             chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHH---------------hcccCCCHHHH
Confidence            456778899999999999999999999999999999999999999999777652               12345788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-----------CCCCccccccccCceecCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-----------SSSSSITTWAAAPEVVNFG  147 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~  147 (245)
                      ..++.|++.||.|||+++++|+||||+||+++.        |+.+.....           .....++..|+|||.+...
T Consensus       104 ~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (314)
T cd08216         104 AFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQN  183 (314)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCC
Confidence            999999999999999999999999999999976        443322111           1122346789999998753


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCC-CccCC--------C-----------CCCCCCCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK-STSLQ--------V-----------APNEDTTHG  207 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~--------~-----------~~~~~~~~~  207 (245)
                      ...++.++|+||||+++++|++|..||.................. .....        .           .........
T Consensus       184 ~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (314)
T cd08216         184 LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPY  263 (314)
T ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcch
Confidence            345789999999999999999999999875443322221111100 00000        0           000000111


Q ss_pred             cccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          208 TRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       208 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ...++.++.+++..||+.||++|||++++++||||.
T Consensus       264 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~  299 (314)
T cd08216         264 TRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK  299 (314)
T ss_pred             hhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHh
Confidence            234457889999999999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.1e-37  Score=241.88  Aligned_cols=201  Identities=19%  Similarity=0.277  Sum_probs=160.4

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +.+..+.+.+|++++++++||||+++++++..++..++||||+++|+|.+++..                ....+++..+
T Consensus        46 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~l~~~~~  109 (266)
T cd05064          46 SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRK----------------HEGQLVAGQL  109 (266)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHh----------------CCCCCCHHHH
Confidence            345567899999999999999999999999999999999999999999776642                1245788999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +.++.|++.||+|||+.|++|+||||+||+++.        ||.........     ...++..|+|||.+.+  ..++.
T Consensus       110 ~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  187 (266)
T cd05064         110 MGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQY--HHFSS  187 (266)
T ss_pred             HHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhh--CCccc
Confidence            999999999999999999999999999999976        44332221111     1223568999999987  56899


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++|||||||++|++++ |..||......+....+....      ..+       .+..++..+.+++..||+.+|.+||+
T Consensus       188 ~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~li~~c~~~~p~~RP~  254 (266)
T cd05064         188 ASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF------RLP-------APRNCPNLLHQLMLDCWQKERGERPR  254 (266)
T ss_pred             hhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC------CCC-------CCCCCCHHHHHHHHHHcCCCchhCCC
Confidence            9999999999999764 999998876655544432221      111       12557889999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      ++++++
T Consensus       255 ~~~i~~  260 (266)
T cd05064         255 FSQIHS  260 (266)
T ss_pred             HHHHHH
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=4.7e-38  Score=255.08  Aligned_cols=217  Identities=16%  Similarity=0.228  Sum_probs=165.2

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc-----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR-----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ....+.+.+|+.+++.++|+||+++++++...+     ..++|+||+.+ +|.+.+..                 ...++
T Consensus        40 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-----------------~~~l~  101 (372)
T cd07853          40 LVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIVS-----------------PQPLS  101 (372)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeecccc-CHHHHHhc-----------------CCCCC
Confidence            345678899999999999999999999998776     78999999974 77554431                 34688


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~  149 (245)
                      +..+..++.|++.||.|||+.|++||||||+||+++.        ||++.......     ...+++.|+|||.+.+ ..
T Consensus       102 ~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~  180 (372)
T cd07853         102 SDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMG-SR  180 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcC-CC
Confidence            9999999999999999999999999999999999986        77665432221     2345889999999875 34


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc------------------CCCCCCCCCCCCcccc
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS------------------LQVAPNEDTTHGTRTL  211 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~  211 (245)
                      .++.++|||||||++|+|++|+.||.+.+.......+.........                  ...+............
T Consensus       181 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (372)
T cd07853         181 HYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQA  260 (372)
T ss_pred             CCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCC
Confidence            5789999999999999999999999887665544443322111000                  0000000001122445


Q ss_pred             cHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          212 SKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       212 ~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++++.++|.+||+.||.+|||+.++++||||.
T Consensus       261 ~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~  292 (372)
T cd07853         261 THEAVHLLCRMLVFDPDKRISAADALAHPYLD  292 (372)
T ss_pred             CHHHHHHHHHhCCCChhhCcCHHHHhcCHhhC
Confidence            78999999999999999999999999999985

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-38  Score=259.12  Aligned_cols=203  Identities=19%  Similarity=0.294  Sum_probs=178.0

Q ss_pred             cHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      +.++.+..+.|.+++.... ||.++.++.+|.+++.+|.||||+.||++..                  ......+++.-
T Consensus       408 ~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~------------------~~~~~~F~e~r  469 (694)
T KOG0694|consen  408 QRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMH------------------HIHTDVFSEPR  469 (694)
T ss_pred             ccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEE------------------EEecccccHHH
Confidence            4568889999999999885 9999999999999999999999999999622                  22346799999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc----cCCCCccccccccCceecCCCCCCCc
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW----ISSSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +..+++.|+.||.|||++||++||||.+|||++.        ||+.+...    ..++.+|||.|+|||.+.+  ..|+.
T Consensus       470 arfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e--~~Yt~  547 (694)
T KOG0694|consen  470 ARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTE--QSYTR  547 (694)
T ss_pred             HHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhcc--Ccccc
Confidence            9999999999999999999999999999999987        88877554    3347889999999999998  77999


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      .+|-|||||+||||+.|..||.++++.+....+......              .+..+|.+..++++++|..+|++|...
T Consensus       548 aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~--------------yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  548 AVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVR--------------YPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCC--------------CCCcccHHHHHHHHHHhccCcccccCC
Confidence            999999999999999999999999998888877654321              125688999999999999999999964


Q ss_pred             -----HHHhhccccc
Q 037274          234 -----EAQVLQEMWH  243 (245)
Q Consensus       234 -----~~~l~~~~f~  243 (245)
                           ++|.+||||+
T Consensus       614 ~e~d~~~i~~hpFFr  628 (694)
T KOG0694|consen  614 GERDAEDIKKHPFFR  628 (694)
T ss_pred             CCCCchhhhhCCccc
Confidence                 7899999997

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.2e-38  Score=243.68  Aligned_cols=205  Identities=26%  Similarity=0.406  Sum_probs=165.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+++++.++|+||+++++++..+...++++|++++++|.+++..                  ..+++..+
T Consensus        39 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~------------------~~~~~~~~  100 (274)
T cd06609          39 AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKP------------------GKLDETYI  100 (274)
T ss_pred             cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhh------------------cCCCHHHH
Confidence            345667889999999999999999999999999999999999999999776642                  26788999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.|+.|||+.+++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.+
T Consensus       101 ~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~  178 (274)
T cd06609         101 AFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQ--SGYDEK  178 (274)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhcc--CCCCch
Confidence            999999999999999999999999999999886        5555443322    13345778999999987  458999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|+||||+++|+|++|..||...+.......+....    ....        ....++..+.+++.+||..+|++|||++
T Consensus       179 sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~~~--------~~~~~~~~~~~~l~~~l~~~p~~Rpt~~  246 (274)
T cd06609         179 ADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN----PPSL--------EGNKFSKPFKDFVSLCLNKDPKERPSAK  246 (274)
T ss_pred             hhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC----CCCC--------cccccCHHHHHHHHHHhhCChhhCcCHH
Confidence            999999999999999999998755433322221111    0000        0022788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       247 ~il~~~~~~  255 (274)
T cd06609         247 ELLKHKFIK  255 (274)
T ss_pred             HHhhChhhc
Confidence            999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.8e-38  Score=243.99  Aligned_cols=210  Identities=28%  Similarity=0.453  Sum_probs=166.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++|+||+++++.+..++..++||||+++++|.+++..                ....+++..+
T Consensus        42 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~----------------~~~~l~~~~~  105 (280)
T cd06611          42 SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLE----------------LERGLTEPQI  105 (280)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHH----------------hcCCCCHHHH
Confidence            345667899999999999999999999999999999999999999999776642                1245889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCC---CCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFG---DDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~---~~~~  151 (245)
                      ..++.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+..+   ...+
T Consensus       106 ~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~  185 (280)
T cd06611         106 RYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPY  185 (280)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCC
Confidence            999999999999999999999999999999975        5554332221    123458899999998531   2446


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|+||||+++|+|++|+.||.................    ..       ...+..++.++.+++..||+.+|.+||
T Consensus       186 ~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (280)
T cd06611         186 DYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEP----PT-------LDQPSKWSSSFNDFLKSCLVKDPDDRP  254 (280)
T ss_pred             CccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCC----CC-------cCCcccCCHHHHHHHHHHhccChhhCc
Confidence            7899999999999999999999987654444333321110    00       011245788999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      +++++++||||.
T Consensus       255 s~~~il~~~~~~  266 (280)
T cd06611         255 TAAELLKHPFVS  266 (280)
T ss_pred             CHHHHhcChhhc
Confidence            999999999985

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=6.4e-38  Score=243.98  Aligned_cols=207  Identities=24%  Similarity=0.400  Sum_probs=161.5

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      +....+.+|+.+++++ +|+||+++++++...      +..++++||+.+++|.+++..               .....+
T Consensus        44 ~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~---------------~~~~~l  108 (272)
T cd06637          44 DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN---------------TKGNTL  108 (272)
T ss_pred             ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHh---------------ccCCCC
Confidence            3456788999999998 699999999998653      458999999999999776642               123458


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCC--
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFG--  147 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~--  147 (245)
                      ++..+..++.|++.||+|||+.+++|+||+|+||+++.        ||++.....    .....+++.|+|||.+.+.  
T Consensus       109 ~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  188 (272)
T cd06637         109 KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN  188 (272)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccC
Confidence            88999999999999999999999999999999999876        776653321    1234568899999998632  


Q ss_pred             -CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 -DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 -~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ...++.++|+|||||++|+|++|+.||................            ........++..+.+++.+||+.+
T Consensus       189 ~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~li~~~l~~~  256 (272)
T cd06637         189 PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP------------APRLKSKKWSKKFQSFIESCLVKN  256 (272)
T ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC------------CCCCCCCCcCHHHHHHHHHHcCCC
Confidence             2457889999999999999999999997644333322221110            001111457789999999999999


Q ss_pred             CCCCccHHHHhhcccc
Q 037274          227 PAKRPAAEAQVLQEMW  242 (245)
Q Consensus       227 p~~Rpt~~~~l~~~~f  242 (245)
                      |.+|||+.+++.||||
T Consensus       257 p~~Rpt~~~il~~~~~  272 (272)
T cd06637         257 HSQRPTTEQLMKHPFI  272 (272)
T ss_pred             hhhCCCHHHHhhCCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=9.5e-38  Score=252.19  Aligned_cols=214  Identities=16%  Similarity=0.260  Sum_probs=159.8

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ....+.+.+|+.+++.++||||+++++++...+      ..+++|||+++ +|.+.+.                   ..+
T Consensus        61 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-------------------~~~  120 (359)
T cd07876          61 QTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIH-------------------MEL  120 (359)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHh-------------------ccC
Confidence            455677889999999999999999999986543      47999999986 5533332                   236


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ++..+..++.|++.||.|||++|++||||||+||+++.        ||.+......   ....+|+.|+|||.+.+  ..
T Consensus       121 ~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~--~~  198 (359)
T cd07876         121 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG--MG  198 (359)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccC--CC
Confidence            77888899999999999999999999999999999975        7766543222   23456889999999987  66


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc-----------------CCCCC-------CC----
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS-----------------LQVAP-------NE----  202 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~-------~~----  202 (245)
                      ++.++|||||||++|+|++|..||.+.+.................                 ...+.       +.    
T Consensus       199 ~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (359)
T cd07876         199 YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFP  278 (359)
T ss_pred             CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccc
Confidence            889999999999999999999999876654433332222111000                 00000       00    


Q ss_pred             CCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          203 DTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       203 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .........++.+.+++.+||+.||.+|||+.++++||||.
T Consensus       279 ~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~  319 (359)
T cd07876         279 SESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT  319 (359)
T ss_pred             cccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhh
Confidence            00001123467899999999999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=4.8e-38  Score=244.18  Aligned_cols=207  Identities=19%  Similarity=0.298  Sum_probs=164.4

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++|+||+++++++...+..++++||+++++|.+++..                 ...+++..+..
T Consensus        45 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~  107 (268)
T cd06630          45 EVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK-----------------YGAFKEAVIIN  107 (268)
T ss_pred             HHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHH-----------------hCCCCHHHHHH
Confidence            3568899999999999999999999999999999999999999999777642                 24578899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC--------CCCccccccccCceecCCCCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS--------SSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ++.|++.||.|||++|++|+||+|+||+++.         ||.+......        ....++..|+|||.+.+  ..+
T Consensus       108 ~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~  185 (268)
T cd06630         108 YTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG--EQY  185 (268)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhcc--CCC
Confidence            9999999999999999999999999999864         4443322211        12235778999999876  567


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|+||||++++++++|..||....................         ....+...++++.+++.+||..+|.+||
T Consensus       186 ~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~~p~~R~  256 (268)
T cd06630         186 GRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT---------APSIPEHLSPGLRDVTLRCLELQPEDRP  256 (268)
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC---------CCCCchhhCHHHHHHHHHHcCCCcccCc
Confidence            8999999999999999999999976443333222222111000         0111245788999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      ++.++++||||+
T Consensus       257 ~~~~ll~~~~~~  268 (268)
T cd06630         257 PSRELLKHPVFR  268 (268)
T ss_pred             CHHHHhcCcccC
Confidence            999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=5.9e-38  Score=249.91  Aligned_cols=203  Identities=14%  Similarity=0.205  Sum_probs=165.9

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ...+.+..|..++..+ +|++|+++++++.+.+..++||||+++|+|.+.+..                 ...+++..+.
T Consensus        42 ~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-----------------~~~~~~~~~~  104 (323)
T cd05616          42 DDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ-----------------VGRFKEPHAV  104 (323)
T ss_pred             hHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHH-----------------cCCCCHHHHH
Confidence            3455677888888877 489999999999999999999999999999665542                 3457889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||+.|++||||||+|||++.        ||++.....    .....|++.|+|||.+.+  ..++.++
T Consensus       105 ~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  182 (323)
T cd05616         105 FYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAY--QPYGKSV  182 (323)
T ss_pred             HHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcC--CCCCCcc
Confidence            99999999999999999999999999999976        776653221    123456999999999987  5689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH--
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA--  233 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~--  233 (245)
                      |+|||||++|+|++|+.||...+.......+.....              ..+...+.++.+++.+||+.+|.+|++.  
T Consensus       183 DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~--------------~~p~~~s~~~~~li~~~l~~~p~~R~~~~~  248 (323)
T cd05616         183 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV--------------AYPKSMSKEAVAICKGLMTKHPGKRLGCGP  248 (323)
T ss_pred             chhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------CCCCcCCHHHHHHHHHHcccCHHhcCCCCC
Confidence            999999999999999999998776665555443221              1114578899999999999999999984  


Q ss_pred             ---HHHhhcccccc
Q 037274          234 ---EAQVLQEMWHF  244 (245)
Q Consensus       234 ---~~~l~~~~f~~  244 (245)
                         .++++|+||+.
T Consensus       249 ~~~~~i~~h~~~~~  262 (323)
T cd05616         249 EGERDIKEHAFFRY  262 (323)
T ss_pred             CCHHHHhcCCCcCC
Confidence               88999999963

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=2.2e-37  Score=238.99  Aligned_cols=205  Identities=16%  Similarity=0.218  Sum_probs=163.7

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe-CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMIS-QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ....+.+.+|++++++++|+|++++++.+.. ++..++++|++++++|.+++..               .....+++..+
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~---------------~~~~~l~~~~~  104 (257)
T cd08223          40 RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKE---------------QKGKLLPENQV  104 (257)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHH---------------hcCCCCCHHHH
Confidence            3456778999999999999999999998764 4468999999999999776642               12345889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.|+++||+.|++|+||+|+||+++.        ||.+.....    .....+++.|+|||.+.+  ..++.+
T Consensus       105 ~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  182 (257)
T cd08223         105 VEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSN--KPYNYK  182 (257)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcC--CCCCch
Confidence            999999999999999999999999999999875        555443321    113345889999999987  568899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|+||||++++++++|+.||...+.............       +      ..+...++.+.+++.+|++.+|.+|||+.
T Consensus       183 ~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  249 (257)
T cd08223         183 SDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL-------P------PMPKDYSPELGELIATMLSKRPEKRPSVK  249 (257)
T ss_pred             hhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC-------C------CCccccCHHHHHHHHHHhccCcccCCCHH
Confidence            9999999999999999999987554444333322110       0      01145788999999999999999999999


Q ss_pred             HHhhcccc
Q 037274          235 AQVLQEMW  242 (245)
Q Consensus       235 ~~l~~~~f  242 (245)
                      ++++||||
T Consensus       250 ~~l~~~~~  257 (257)
T cd08223         250 SILRQPYI  257 (257)
T ss_pred             HHhcCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.3e-37  Score=241.47  Aligned_cols=213  Identities=31%  Similarity=0.473  Sum_probs=168.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.+++.++|+||+++++.+..++..++++|++++++|.+++...              .....+++..+
T Consensus        39 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~--------------~~~~~~~~~~~  104 (267)
T cd06610          39 CQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSS--------------YPRGGLDEAII  104 (267)
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHh--------------cccCCCCHHHH
Confidence            3447788999999999999999999999999999999999999999997777521              01245889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--------CCccccccccCceecCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ..++.|++.||++||+.|++|+||+|+||+++.        ||.+.......        ...++..|+|||.+..+ ..
T Consensus       105 ~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~-~~  183 (267)
T cd06610         105 ATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQV-HG  183 (267)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccc-cC
Confidence            999999999999999999999999999999986        55443333221        22457889999998762 36


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      ++.++|+||||+++++|++|..||...+................        ........+++.+.+++.+||..||.+|
T Consensus       184 ~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~R  255 (267)
T cd06610         184 YDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSL--------ETGADYKKYSKSFRKMISLCLQKDPSKR  255 (267)
T ss_pred             cCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCc--------CCccccccccHHHHHHHHHHcCCChhhC
Confidence            88999999999999999999999987655444443332211100        0001114678899999999999999999


Q ss_pred             ccHHHHhhcccc
Q 037274          231 PAAEAQVLQEMW  242 (245)
Q Consensus       231 pt~~~~l~~~~f  242 (245)
                      |++.++++||||
T Consensus       256 p~~~~ll~~p~~  267 (267)
T cd06610         256 PTAEELLKHKFF  267 (267)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=3.3e-38  Score=247.99  Aligned_cols=205  Identities=22%  Similarity=0.351  Sum_probs=165.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+.++++++|+||+++++.+..++..++++||+++++|.+++.                  ...+++..+.
T Consensus        60 ~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~------------------~~~l~~~~~~  121 (292)
T cd06658          60 QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVT------------------HTRMNEEQIA  121 (292)
T ss_pred             HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHh------------------cCCCCHHHHH
Confidence            4456778999999999999999999999999999999999999999966553                  2347888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||++......    ....+++.|+|||.+.+  ..++.++
T Consensus       122 ~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~  199 (292)
T cd06658         122 TVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISR--LPYGTEV  199 (292)
T ss_pred             HHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHcc--CCCCchh
Confidence            99999999999999999999999999999975        5554322111    12345889999999876  5688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||||+++|++++|+.||..................    ..       ......+..+.+++..||..||.+|||+++
T Consensus       200 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~  268 (292)
T cd06658         200 DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP----RV-------KDSHKVSSVLRGFLDLMLVREPSQRATAQE  268 (292)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC----cc-------ccccccCHHHHHHHHHHccCChhHCcCHHH
Confidence            9999999999999999999876555444333222110    00       011456789999999999999999999999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||+
T Consensus       269 il~~~~~~  276 (292)
T cd06658         269 LLQHPFLK  276 (292)
T ss_pred             HhhChhhh
Confidence            99999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.3e-37  Score=241.82  Aligned_cols=213  Identities=14%  Similarity=0.244  Sum_probs=167.2

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|++++++++|+||+++++++...+..+++|||+++++|.+++...........   ........+++..+.
T Consensus        49 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~---~~~~~~~~l~~~~~~  125 (280)
T cd05049          49 NDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLK---SPDSPMGELTLSQLL  125 (280)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhc---ccccccccccHHHHH
Confidence            44678899999999999999999999999999999999999999999998875432111100   011223558899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.|+.+||++|++|+||||+||+++.        ||.+......      ....+++.|+|||.+.+  ..++.
T Consensus       126 ~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  203 (280)
T cd05049         126 QIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY--RKFTT  203 (280)
T ss_pred             HHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhcc--CCcch
Confidence            99999999999999999999999999999975        6655432211      12233678999999987  56899


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|+|++ |..||...+..+....+.....      .       ......+..+.+++.+||+.||.+||+
T Consensus       204 ~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~  270 (280)
T cd05049         204 ESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRL------L-------QRPRTCPSEVYDIMLGCWKRDPQQRIN  270 (280)
T ss_pred             hhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCc------C-------CCCCCCCHHHHHHHHHHcCCCcccCCC
Confidence            9999999999999998 9999987666555544432110      0       111457889999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      +.++++
T Consensus       271 ~~eil~  276 (280)
T cd05049         271 IKDIHE  276 (280)
T ss_pred             HHHHHH
Confidence            999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.1e-37  Score=244.17  Aligned_cols=207  Identities=16%  Similarity=0.130  Sum_probs=166.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++|+||+++++.+..++..++++||+++++|.+++..               .....+++..+..+
T Consensus        43 ~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---------------~~~~~~~~~~~~~~  107 (285)
T cd05632          43 GESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYN---------------MGNPGFEEERALFY  107 (285)
T ss_pred             HHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHH---------------hcCCCCCHHHHHHH
Confidence            345678899999999999999999999999999999999999999665531               12346899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      +.|++.||.|||+.|++|+||||+||+++.        ||.+......   ....+++.|+|||.+.+  ..++.++|+|
T Consensus       108 ~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~--~~~~~~~Di~  185 (285)
T cd05632         108 AAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNN--QRYTLSPDYW  185 (285)
T ss_pred             HHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcC--CCCCcccchH
Confidence            999999999999999999999999999875        6665433221   13456899999999986  5688999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----H
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----A  233 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~  233 (245)
                      |||+++|++++|..||....................          ......+++.+.+++..||+.||.+||+     +
T Consensus       186 slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~  255 (285)
T cd05632         186 GLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE----------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGA  255 (285)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc----------cccCccCCHHHHHHHHHHccCCHhHcCCCcccCh
Confidence            999999999999999987655443333322221110          0112457889999999999999999999     8


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      .+++.|+||+
T Consensus       256 ~~l~~~~~~~  265 (285)
T cd05632         256 GEVKRHPFFR  265 (285)
T ss_pred             HHHHcChhhh
Confidence            8999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=2e-37  Score=244.95  Aligned_cols=224  Identities=14%  Similarity=0.210  Sum_probs=164.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHH--HHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQ--LIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   84 (245)
                      .......+.+|++++++++||||+++++++...+..+++|||+++|+|.+++............  ..........+++.
T Consensus        59 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (304)
T cd05096          59 NKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYS  138 (304)
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHH
Confidence            4456678999999999999999999999999999999999999999999888643211110000  00001112457888


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~  150 (245)
                      .+..++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ...++..|+|||.+..  ..
T Consensus       139 ~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~  216 (304)
T cd05096         139 SLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM--GK  216 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc--CC
Confidence            99999999999999999999999999999999876        77665432211      2233678999999876  55


Q ss_pred             CCchhhHHHHHHHHHHHhh--CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPC--GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ++.++||||||+++|+|++  +..||........................      ...+..++..+.+++.+||+.||.
T Consensus       217 ~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~cl~~~p~  290 (304)
T cd05096         217 FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVY------LFRPPPCPQGLYELMLQCWSRDCR  290 (304)
T ss_pred             CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhcccccc------ccCCCCCCHHHHHHHHHHccCCch
Confidence            8999999999999999986  56788776555444333222111110000      011145678999999999999999


Q ss_pred             CCccHHHHhh
Q 037274          229 KRPAAEAQVL  238 (245)
Q Consensus       229 ~Rpt~~~~l~  238 (245)
                      +|||++++..
T Consensus       291 ~RPs~~~i~~  300 (304)
T cd05096         291 ERPSFSDIHA  300 (304)
T ss_pred             hCcCHHHHHH
Confidence            9999999854

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-38  Score=253.94  Aligned_cols=203  Identities=18%  Similarity=0.185  Sum_probs=162.6

Q ss_pred             HHHHHHHHHHHHhhC---CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274           10 EYAKLAREIYRYKHL---SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l---~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .......|..++..+   +||||+++++.+...+..++||||+++|+|.+.+..                 ...+++..+
T Consensus        36 ~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----------------~~~~~~~~~   98 (330)
T cd05586          36 EVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQK-----------------EGRFSEDRA   98 (330)
T ss_pred             HHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHh-----------------cCCCCHHHH
Confidence            344555677777665   699999999999999999999999999999665532                 356889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.||+.||+|||++|++||||||+||+++.        ||++.....    .....||+.|+|||.+.+ ...++.+
T Consensus        99 ~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~  177 (330)
T cd05586          99 KFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLD-EKGYTKH  177 (330)
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcC-CCCCCCc
Confidence            999999999999999999999999999999975        776654222    123457999999999874 3457899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---  231 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---  231 (245)
                      +|||||||++|+|++|+.||...+.......+.....     ..        ....+++++.+++.+||..||.+||   
T Consensus       178 ~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----~~--------~~~~~~~~~~~li~~~L~~~P~~R~~~~  244 (330)
T cd05586         178 VDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV-----RF--------PKNVLSDEGRQFVKGLLNRNPQHRLGAH  244 (330)
T ss_pred             cceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC-----CC--------CCccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence            9999999999999999999988666555544432211     11        1134688999999999999999998   


Q ss_pred             -cHHHHhhccccc
Q 037274          232 -AAEAQVLQEMWH  243 (245)
Q Consensus       232 -t~~~~l~~~~f~  243 (245)
                       +++++++||||.
T Consensus       245 ~~~~~ll~h~~~~  257 (330)
T cd05586         245 RDAVELKEHPFFA  257 (330)
T ss_pred             CCHHHHhcCcccc
Confidence             799999999985

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=2.2e-37  Score=240.47  Aligned_cols=208  Identities=22%  Similarity=0.281  Sum_probs=161.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC--cHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI--TVDC   85 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   85 (245)
                      ....+.+.+|+.++++++|+||+++++++..++..++++||+++++|.+++...                ...+  ++..
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~  109 (268)
T cd06624          46 SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSK----------------WGPLKDNEQT  109 (268)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHh----------------cccCCCcHHH
Confidence            446678999999999999999999999999999999999999999997776521                1223  6788


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCcccccc----CCCCccccccccCceecCCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +..++.|++.||+|||+.|++|+||||+||+++.         ||.+.....    .....+++.|+|||.+..+...++
T Consensus       110 ~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  189 (268)
T cd06624         110 IIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYG  189 (268)
T ss_pred             HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCC
Confidence            8889999999999999999999999999999963         554433221    112345889999999876445578


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++|+||||+++|++++|..||................  ..         ....+...++++.+++.+||+.+|.+|||
T Consensus       190 ~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~--~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  258 (268)
T cd06624         190 APADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF--KI---------HPEIPESLSAEAKNFILRCFEPDPDKRAS  258 (268)
T ss_pred             chhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh--cc---------CCCCCcccCHHHHHHHHHHcCCCchhCCC
Confidence            99999999999999999999997643322111111000  00         00112457789999999999999999999


Q ss_pred             HHHHhhcccc
Q 037274          233 AEAQVLQEMW  242 (245)
Q Consensus       233 ~~~~l~~~~f  242 (245)
                      +.+++.||||
T Consensus       259 ~~~ll~~~~~  268 (268)
T cd06624         259 AHDLLQDPFL  268 (268)
T ss_pred             HHHHHhCCCC
Confidence            9999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=3e-38  Score=251.81  Aligned_cols=201  Identities=17%  Similarity=0.201  Sum_probs=162.6

Q ss_pred             HHHHHHHHHH-HHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIY-RYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~-~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+..|.. +++.++||||+++++.+..++..++||||+.+|+|...+..                 ...+++..+..
T Consensus        38 ~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~  100 (325)
T cd05604          38 EQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQR-----------------ERSFPEPRARF  100 (325)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHH-----------------cCCCCHHHHHH
Confidence            4455666665 56789999999999999999999999999999999655531                 34688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.||+.||.|||+.|++||||||+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.++|
T Consensus       101 ~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D  178 (325)
T cd05604         101 YAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRK--QPYDNTVD  178 (325)
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcC--CCCCCcCc
Confidence            9999999999999999999999999999975        776553221    123456899999999987  56889999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH---
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA---  233 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~---  233 (245)
                      ||||||++|+|++|..||...+.......+.....     .         .....+..+.+++.+||..+|.+||++   
T Consensus       179 vwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~-----~---------~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~  244 (325)
T cd05604         179 WWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL-----V---------LRPGASLTAWSILEELLEKDRQRRLGAKED  244 (325)
T ss_pred             cccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc-----c---------CCCCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence            99999999999999999998766555544433210     0         013467889999999999999999976   


Q ss_pred             -HHHhhccccc
Q 037274          234 -EAQVLQEMWH  243 (245)
Q Consensus       234 -~~~l~~~~f~  243 (245)
                       .++++||||.
T Consensus       245 ~~~i~~h~~f~  255 (325)
T cd05604         245 FLEIQEHPFFE  255 (325)
T ss_pred             HHHHhcCCCcC
Confidence             5899999995

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=1.7e-37  Score=239.40  Aligned_cols=205  Identities=20%  Similarity=0.237  Sum_probs=166.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+++++.++||||+++++.+..++..++|+|++++++|.+++..               .....+++..+.
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---------------~~~~~~~~~~~~  104 (256)
T cd08220          40 KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQK---------------RCNSLLDEDTIL  104 (256)
T ss_pred             cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHH---------------hcccCCCHHHHH
Confidence            44577899999999999999999999999989999999999999999777652               123457889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccCC---CCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||++|++|+||+|+||+++.         ||.+.......   ...++..|+|||.+.+  ..++.++
T Consensus       105 ~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~  182 (256)
T cd08220         105 HFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEG--KPYNQKS  182 (256)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccC--CCCCccc
Confidence            99999999999999999999999999999974         45444332221   2345788999999986  5678999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||||+++|++++|..||...+.......+......             ..+...+.++.+++..||+.+|.+|||+.+
T Consensus       183 Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~  249 (256)
T cd08220         183 DIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA-------------PISDRYSPDLRQLILSMLNLDPSKRPQLSQ  249 (256)
T ss_pred             chHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC-------------CCCCCcCHHHHHHHHHHccCChhhCCCHHH
Confidence            9999999999999999999876655444443322110             011457889999999999999999999999


Q ss_pred             Hhhcccc
Q 037274          236 QVLQEMW  242 (245)
Q Consensus       236 ~l~~~~f  242 (245)
                      +++|||+
T Consensus       250 ll~~p~~  256 (256)
T cd08220         250 IMAQPIC  256 (256)
T ss_pred             HhhCCCC
Confidence            9999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.4e-37  Score=243.95  Aligned_cols=213  Identities=16%  Similarity=0.218  Sum_probs=159.1

Q ss_pred             HHHHHHHHHHhhC---CCCCeeeEEEEEEe-----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           12 AKLAREIYRYKHL---SHPNIIPIYKTMIS-----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        12 ~~~~~E~~~l~~l---~h~~Iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ..+.+|+++++.+   +||||+++++++..     ....++++|++.+ +|.+++..               .....+++
T Consensus        44 ~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---------------~~~~~~~~  107 (288)
T cd07863          44 LSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDK---------------VPPPGLPA  107 (288)
T ss_pred             hHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHh---------------cCCCCCCH
Confidence            3456777777665   69999999998764     2458999999985 78665542               12345889


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..+..++.|++.||.|||+.|++|+||||+||+++.        ||.+......   ....+++.|+|||.+.+  ..++
T Consensus       108 ~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  185 (288)
T cd07863         108 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQ--STYA  185 (288)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhC--CCCC
Confidence            999999999999999999999999999999999975        6665443222   12345889999999986  5689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC-------------CCCCCCCCcccccHHHHHHH
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA-------------PNEDTTHGTRTLSKNFWNMV  219 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~li  219 (245)
                      .++|||||||++|+|++|.+||......+....+............+             ...........++..+.+++
T Consensus       186 ~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  265 (288)
T cd07863         186 TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLL  265 (288)
T ss_pred             CcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHH
Confidence            99999999999999999999998876665555544322111000000             00000111135678899999


Q ss_pred             HHhcCCCCCCCccHHHHhhcccc
Q 037274          220 KICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       220 ~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      .+||+.||.+|||+.+++.||||
T Consensus       266 ~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         266 LEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             HHHhccCcccCCCHHHHhcCCCC
Confidence            99999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.7e-38  Score=256.47  Aligned_cols=212  Identities=17%  Similarity=0.247  Sum_probs=160.4

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      +...+|++++++++||||+++++++...+..+++||++. ++|.+++.                 ....+++..+..++.
T Consensus       131 ~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~-----------------~~~~l~~~~~~~i~~  192 (392)
T PHA03207        131 KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVD-----------------RSGPLPLEQAITIQR  192 (392)
T ss_pred             ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHH-----------------hcCCCCHHHHHHHHH
Confidence            345789999999999999999999999999999999987 47755442                 135688999999999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCchhhH
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      |++.||.|||+.|++||||||+|||++.        ||++.......      ...+|+.|+|||++.+  ..++.++||
T Consensus       193 ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv  270 (392)
T PHA03207        193 RLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLAL--DPYCAKTDI  270 (392)
T ss_pred             HHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcC--CCCCchhhH
Confidence            9999999999999999999999999876        77665433222      2356999999999987  568999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCch---HHHHHHHhcCCCCc-cCC-----------------CCCCC--CCCCCcccccHH
Q 037274          158 WLIGITALQFPCGGLPVSRRQDL---DIMTKMLMKQPKST-SLQ-----------------VAPNE--DTTHGTRTLSKN  214 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~-~~~-----------------~~~~~--~~~~~~~~~~~~  214 (245)
                      |||||++|+|++|+.||.+....   ..+..+........ .+.                 ..++.  .........+.+
T Consensus       271 wslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (392)
T PHA03207        271 WSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMD  350 (392)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchh
Confidence            99999999999999999765432   22222221111000 000                 00000  000011345678


Q ss_pred             HHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          215 FWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       215 ~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.++|.+||..||.+|||+.+++.||||.
T Consensus       351 ~~~li~~ml~~dp~~Rpsa~e~l~~p~f~  379 (392)
T PHA03207        351 VEYLIAKMLTFDQEFRPSAQDILSLPLFT  379 (392)
T ss_pred             HHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence            89999999999999999999999999996

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.3e-37  Score=243.84  Aligned_cols=217  Identities=18%  Similarity=0.259  Sum_probs=163.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++..++..++|+||+. ++|.+++...              .....+++..++.+
T Consensus        42 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~--------------~~~~~~~~~~~~~~  106 (285)
T cd07861          42 VPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSL--------------PKGQYMDAELVKSY  106 (285)
T ss_pred             chHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcC--------------CCCCcCCHHHHHHH
Confidence            34678899999999999999999999999999999999998 5886666421              11356889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.++|+
T Consensus       107 ~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv  185 (285)
T cd07861         107 LYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLG-SPRYSTPVDI  185 (285)
T ss_pred             HHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcC-CCCcCcHHHH
Confidence            999999999999999999999999999976        5554332211    12244788999998864 3457889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC-------------CCC--CCCCCCCCcccccHHHHHHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL-------------QVA--PNEDTTHGTRTLSKNFWNMVKIC  222 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~~li~~~  222 (245)
                      ||||+++|++++|+.||.+....................             ..+  ...........+++++.++|.+|
T Consensus       186 ~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  265 (285)
T cd07861         186 WSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKM  265 (285)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHH
Confidence            999999999999999998766544433332211100000             000  00000011245788999999999


Q ss_pred             cCCCCCCCccHHHHhhcccc
Q 037274          223 LAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       223 l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      |+.||.+|||+.+++.||||
T Consensus       266 l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         266 LIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             hcCChhhCCCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2.2e-37  Score=241.64  Aligned_cols=205  Identities=25%  Similarity=0.342  Sum_probs=165.0

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ......+.+.+|+.++++++|+||+++++.+.+++..++|+||+++++|.+++..                  ..+++..
T Consensus        41 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~------------------~~l~~~~  102 (277)
T cd06640          41 EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA------------------GPFDEFQ  102 (277)
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc------------------CCCCHHH
Confidence            3456678899999999999999999999999999999999999999999776642                  3467788


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCc
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +..++.|++.||.++|+.+++|+||+|+||+++.        ||.+.......    ...++..|+|||.+.+  ..++.
T Consensus       103 ~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~--~~~~~  180 (277)
T cd06640         103 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQ--SAYDS  180 (277)
T ss_pred             HHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhcc--CCCcc
Confidence            8899999999999999999999999999999986        55553332211    2234778999999986  55889


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++|+||||+++|+|++|..||................             .......++..+.+++.+||+.+|.+||++
T Consensus       181 ~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  247 (277)
T cd06640         181 KADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-------------PPTLTGEFSKPFKEFIDACLNKDPSFRPTA  247 (277)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC-------------CCCCchhhhHHHHHHHHHHcccCcccCcCH
Confidence            9999999999999999999998755433322111000             011124567889999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      +++++|+||.
T Consensus       248 ~~il~~~~~~  257 (277)
T cd06640         248 KELLKHKFIV  257 (277)
T ss_pred             HHHHhChHhh
Confidence            9999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=3.4e-38  Score=255.77  Aligned_cols=221  Identities=16%  Similarity=0.203  Sum_probs=174.4

Q ss_pred             cccHHHHHHHHHHHHHHhhCC-C-----CCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccC
Q 037274            5 NHQAEEYAKLAREIYRYKHLS-H-----PNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR   78 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~-h-----~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~   78 (245)
                      .+...-..+...|+.+|..|+ |     -|+|+++++|...++.|||+|.+.. +|+++++.               ...
T Consensus       220 KN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~-NLYellK~---------------n~f  283 (586)
T KOG0667|consen  220 KNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLST-NLYELLKN---------------NKF  283 (586)
T ss_pred             ccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhh-hHHHHHHh---------------cCC
Confidence            344556777889999999997 3     3999999999999999999999975 99777763               345


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccCC-CCccccccccCceecCC
Q 037274           79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWISS-SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~  147 (245)
                      ..++...++.++.||+.||.+||+.||+|+||||+|||+..          ||++......- +...+..|+|||++.| 
T Consensus       284 ~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILG-  362 (586)
T KOG0667|consen  284 RGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILG-  362 (586)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhcc-
Confidence            67999999999999999999999999999999999999876          77765444332 3445889999999999 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC------------CC----------CC-----
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL------------QV----------AP-----  200 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------~~----------~~-----  200 (245)
                       ..|+.+.|||||||+++||.+|.+.|.+.++.+.+..+...+......            ..          ..     
T Consensus       363 -lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~  441 (586)
T KOG0667|consen  363 -LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGT  441 (586)
T ss_pred             -CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccc
Confidence             779999999999999999999999999999888877664433211100            00          00     


Q ss_pred             ------------------CCCCCCC----cccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          201 ------------------NEDTTHG----TRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       201 ------------------~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                                        +......    ...-...+.+++.+||..||.+|+|+.+.++|||+.
T Consensus       442 k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~  506 (586)
T KOG0667|consen  442 KSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLT  506 (586)
T ss_pred             cchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccc
Confidence                              0000000    011224679999999999999999999999999986

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=6.4e-38  Score=244.69  Aligned_cols=204  Identities=25%  Similarity=0.362  Sum_probs=164.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++.+..++..++|+||+++++|.+++.                  ...+++..+
T Consensus        42 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~------------------~~~~~~~~~  103 (277)
T cd06642          42 AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK------------------PGPLEETYI  103 (277)
T ss_pred             chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhh------------------cCCCCHHHH
Confidence            34566789999999999999999999999999999999999999999966654                  245788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.|+.|||++|++|+||+|+||+++.        ||.+.......    ...++..|+|||.+.+  ..++.+
T Consensus       104 ~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  181 (277)
T cd06642         104 ATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ--SAYDFK  181 (277)
T ss_pred             HHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCc--CCCchh
Confidence            999999999999999999999999999999875        66554332221    2235788999999987  568899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|+||||+++|++++|..||...........+....         .    .......+.++.+++.+||+.+|++||++.
T Consensus       182 ~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  248 (277)
T cd06642         182 ADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS---------P----PTLEGQYSKPFKEFVEACLNKDPRFRPTAK  248 (277)
T ss_pred             hhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC---------C----CCCCcccCHHHHHHHHHHccCCcccCcCHH
Confidence            999999999999999999997644333222111110         0    011245678899999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       249 ~il~~~~~~  257 (277)
T cd06642         249 ELLKHKFIT  257 (277)
T ss_pred             HHHHhHHHH
Confidence            999999974

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=4.6e-38  Score=250.75  Aligned_cols=199  Identities=18%  Similarity=0.195  Sum_probs=161.4

Q ss_pred             HHHHHHHH-HHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           12 AKLAREIY-RYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        12 ~~~~~E~~-~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ..+..|.. +++.++|+||+++++++..++..++||||+++|+|.+++..                 ...+.+..+..++
T Consensus        40 ~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~  102 (325)
T cd05602          40 KHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR-----------------ERCFLEPRARFYA  102 (325)
T ss_pred             HHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHh-----------------cCCCCHHHHHHHH
Confidence            34455554 56889999999999999999999999999999999766642                 3457788888899


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhhHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .||+.||.|||+.|++||||||+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.++|||
T Consensus       103 ~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Diw  180 (325)
T cd05602         103 AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHK--QPYDRTVDWW  180 (325)
T ss_pred             HHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcC--CCCCCccccc
Confidence            99999999999999999999999999975        776653221    123457999999999987  6688999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH----
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE----  234 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~----  234 (245)
                      ||||++|+|++|..||...+.......+.....     .         ....++..+.+++.+||+.+|.+|+++.    
T Consensus       181 slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-----~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  246 (325)
T cd05602         181 CLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-----Q---------LKPNITNSARHLLEGLLQKDRTKRLGAKDDFM  246 (325)
T ss_pred             cccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-----C---------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence            999999999999999998776665555433210     0         1145788999999999999999999875    


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++|+||.
T Consensus       247 ~i~~~~~~~  255 (325)
T cd05602         247 EIKNHIFFS  255 (325)
T ss_pred             HHhcCcccC
Confidence            899999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2.5e-37  Score=240.08  Aligned_cols=207  Identities=28%  Similarity=0.408  Sum_probs=161.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .....+.+|+.+++.++||||+++++.+..++..++++||+++++|.+++..                 ...+++..++.
T Consensus        48 ~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~  110 (267)
T cd06645          48 EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV-----------------TGPLSESQIAY  110 (267)
T ss_pred             hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh-----------------cCCCCHHHHHH
Confidence            4456788999999999999999999999999999999999999999776642                 34588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecC-CCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNF-GDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~~~  155 (245)
                      ++.|++.||.|||+.|++|+||||+||+++.        ||.+.....    .....+++.|+|||.+.. ....++.++
T Consensus       111 ~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  190 (267)
T cd06645         111 VSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLC  190 (267)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchh
Confidence            9999999999999999999999999999875        665433221    123356889999999752 124578899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+|||||++|+|++|..||................   .  .  .+.  ......++..+.+++.+||+.+|++||++++
T Consensus       191 DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~---~--~--~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~  261 (267)
T cd06645         191 DIWAVGITAIELAELQPPMFDLHPMRALFLMTKSN---F--Q--PPK--LKDKMKWSNSFHHFVKMALTKNPKKRPTAEK  261 (267)
T ss_pred             hhHHHHHHHHHHhcCCCCcccccchhhHHhhhccC---C--C--CCc--ccccCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence            99999999999999999997644333222111111   0  0  000  0111346788999999999999999999999


Q ss_pred             Hhhccc
Q 037274          236 QVLQEM  241 (245)
Q Consensus       236 ~l~~~~  241 (245)
                      +++|||
T Consensus       262 ll~~~~  267 (267)
T cd06645         262 LLQHPF  267 (267)
T ss_pred             HhcCCC
Confidence            999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.1e-37  Score=251.41  Aligned_cols=214  Identities=17%  Similarity=0.248  Sum_probs=160.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ....+.+.+|+.+++.++||||+++++++...      ...+++|||+++ ++.+.+.                   ..+
T Consensus        57 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-------------------~~l  116 (355)
T cd07874          57 QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQ-------------------MEL  116 (355)
T ss_pred             hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHh-------------------hcC
Confidence            44567788999999999999999999988543      347999999986 5644332                   236


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ++..+..++.|++.||.|||++|++||||||+||+++.        ||++......   ....+++.|+|||.+.+  ..
T Consensus       117 ~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~  194 (355)
T cd07874         117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--MG  194 (355)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcC--CC
Confidence            78888999999999999999999999999999999975        7776544332   23456899999999986  56


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCc----------------------cCCCCC------CC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST----------------------SLQVAP------NE  202 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~------~~  202 (245)
                      ++.++|||||||++|+|++|+.||.+.+................                      ....+.      ..
T Consensus       195 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (355)
T cd07874         195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFP  274 (355)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccc
Confidence            89999999999999999999999987665444333322111000                      000000      00


Q ss_pred             CCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          203 DTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       203 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .........+.++.+++.+||+.||.+|||+.++++||||.
T Consensus       275 ~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~  315 (355)
T cd07874         275 ADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN  315 (355)
T ss_pred             cccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence            00011133457889999999999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.1e-37  Score=242.73  Aligned_cols=215  Identities=20%  Similarity=0.268  Sum_probs=164.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++|+||+++++++..++..++++||+++++|..++..                 ...+++..+..+
T Consensus        43 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-----------------~~~~~~~~~~~~  105 (286)
T cd07847          43 IKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKN-----------------PRGVPEHLIKKI  105 (286)
T ss_pred             ccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhC-----------------CCCCCHHHHHHH
Confidence            345678999999999999999999999999999999999999888554431                 245889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||+|||+.|++|+||+|+||+++.        ||.+.......    ...++..|+|||.+.+ ...++.++|+
T Consensus       106 ~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~~Di  184 (286)
T cd07847         106 IWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVG-DTQYGPPVDV  184 (286)
T ss_pred             HHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhC-CCCcCchhhh
Confidence            999999999999999999999999999875        66555443322    2345788999999864 3457889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCc--------------cCCCCCCCCC---CCCcccccHHHHHHHH
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST--------------SLQVAPNEDT---THGTRTLSKNFWNMVK  220 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~---~~~~~~~~~~~~~li~  220 (245)
                      ||||+++|+|++|..||.+....+....+........              ....+.+...   .......+..+.+++.
T Consensus       185 ~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  264 (286)
T cd07847         185 WAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLK  264 (286)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHH
Confidence            9999999999999999987665544433322111000              0000110000   0011346788999999


Q ss_pred             HhcCCCCCCCccHHHHhhcccc
Q 037274          221 ICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      +||+.+|++||++.+++.||||
T Consensus       265 ~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         265 GCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             HHhcCCccccCCHHHHhcCCCC
Confidence            9999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=5.9e-37  Score=241.00  Aligned_cols=210  Identities=24%  Similarity=0.376  Sum_probs=165.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +.+..+.+.+|+.++++++|+||+++++.+..++..++||||+++++|..++..                ....+++..+
T Consensus        49 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----------------~~~~l~~~~~  112 (292)
T cd06644          49 SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLE----------------LDRGLTEPQI  112 (292)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHh----------------hcCCCCHHHH
Confidence            455678899999999999999999999999999999999999999999665531                1245888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCC---CCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFG---DDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~---~~~~  151 (245)
                      ..++.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.++   ...+
T Consensus       113 ~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  192 (292)
T cd06644         113 QVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPY  192 (292)
T ss_pred             HHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCC
Confidence            999999999999999999999999999999974        6655432221    123457899999998641   2446


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|+|||||++|+|++|..||...+............    ....       ..+..++.++.+++.+||..+|++||
T Consensus       193 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp  261 (292)
T cd06644         193 DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE----PPTL-------SQPSKWSMEFRDFLKTALDKHPETRP  261 (292)
T ss_pred             CchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCC----CccC-------CCCcccCHHHHHHHHHHhcCCcccCc
Confidence            789999999999999999999998755433322221111    0000       11245778999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      +++++++||||.
T Consensus       262 ~~~~il~~~~~~  273 (292)
T cd06644         262 SAAQLLEHPFVS  273 (292)
T ss_pred             CHHHHhcCcccc
Confidence            999999999985

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.4e-37  Score=251.57  Aligned_cols=214  Identities=16%  Similarity=0.241  Sum_probs=162.1

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ....+.+.+|+.+++.++||||+++++.+...      ...++||||+++ +|.+.+.                   ..+
T Consensus        64 ~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-------------------~~~  123 (364)
T cd07875          64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-------------------MEL  123 (364)
T ss_pred             chhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHH-------------------hcC
Confidence            44567788999999999999999999987543      347999999986 6644432                   236


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ++..+..++.|++.||.|||++|++||||||+||+++.        ||++......   ....+++.|+|||.+.+  ..
T Consensus       124 ~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~--~~  201 (364)
T cd07875         124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--MG  201 (364)
T ss_pred             CHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhC--CC
Confidence            77888999999999999999999999999999999975        7777644332   23456899999999987  66


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc----------------------CCCC--CC----C
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS----------------------LQVA--PN----E  202 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~--~~----~  202 (245)
                      ++.++|||||||++|+|++|+.||.+.+..+....+.........                      ....  .+    .
T Consensus       202 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (364)
T cd07875         202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFP  281 (364)
T ss_pred             CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCcccccc
Confidence            899999999999999999999999887665555544332211000                      0000  00    0


Q ss_pred             CCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          203 DTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       203 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .........+..++++|.+||+.||.+|||++++++||||.
T Consensus       282 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~  322 (364)
T cd07875         282 ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN  322 (364)
T ss_pred             ccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence            00011122456789999999999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=5.2e-38  Score=242.84  Aligned_cols=203  Identities=26%  Similarity=0.395  Sum_probs=159.4

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .+.+..+.+.+|++.+++++||||++++|++...+..++|+||+++|+|.+++...               ....+++..
T Consensus        40 ~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~---------------~~~~~~~~~  104 (259)
T PF07714_consen   40 SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSK---------------NKEPLSEQQ  104 (259)
T ss_dssp             SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHT---------------CTTTSBHHH
T ss_pred             cccccceeeeeccccccccccccccccccccccccccccccccccccccccccccc---------------ccccccccc
Confidence            45567899999999999999999999999999888899999999999998877632               246689999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------CCCCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------SSSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..++.|++.||+|||+++++|+||+++||+++.        ||.......      .........|+|||.+..  ..+
T Consensus       105 ~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~  182 (259)
T PF07714_consen  105 RLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKD--GEY  182 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHH--SEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccc
Confidence            9999999999999999999999999999999986        655544411      122334778999999987  558


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++||+++ |..||......+....+.....      .+       .+..++..+.+++..||..+|.+|
T Consensus       183 ~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~li~~C~~~~p~~R  249 (259)
T PF07714_consen  183 TKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR------LP-------IPDNCPKDIYSLIQQCWSHDPEKR  249 (259)
T ss_dssp             SHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE------TT-------SBTTSBHHHHHHHHHHT-SSGGGS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc------ce-------eccchhHHHHHHHHHHcCCChhhC
Confidence            999999999999999999 6799988766665555533221      11       115578999999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      ||+.++++
T Consensus       250 Ps~~~i~~  257 (259)
T PF07714_consen  250 PSFQEILQ  257 (259)
T ss_dssp             --HHHHHH
T ss_pred             cCHHHHHh
Confidence            99999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=4.4e-37  Score=237.23  Aligned_cols=206  Identities=20%  Similarity=0.270  Sum_probs=167.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +....+++.+|++++++++|+||+++++++.+.+..++++||+++++|.+++..               .....+++..+
T Consensus        39 ~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~---------------~~~~~~~~~~~  103 (256)
T cd08221          39 SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVR---------------QKGQLFEEEMV  103 (256)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHh---------------ccccCCCHHHH
Confidence            345677889999999999999999999999999999999999999999776652               12346788999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.+
T Consensus       104 ~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~--~~~~~~  181 (256)
T cd08221         104 LWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQG--VKYNFK  181 (256)
T ss_pred             HHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCC--CCCCCc
Confidence            999999999999999999999999999999876        5544332221    13446889999999986  557899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|+||||+++++|++|..||...+..+....+.....       .      ......+.++.+++.+||..+|.+||++.
T Consensus       182 ~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~  248 (256)
T cd08221         182 SDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY-------T------PVVSVYSSELISLVHSLLQQDPEKRPTAD  248 (256)
T ss_pred             chhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-------C------CCccccCHHHHHHHHHHcccCcccCCCHH
Confidence            9999999999999999999987665555544432210       0      01145688999999999999999999999


Q ss_pred             HHhhcccc
Q 037274          235 AQVLQEMW  242 (245)
Q Consensus       235 ~~l~~~~f  242 (245)
                      ++++|+|+
T Consensus       249 ~ll~~~~l  256 (256)
T cd08221         249 EVLDQPLL  256 (256)
T ss_pred             HHhhCcCC
Confidence            99999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.1e-37  Score=269.87  Aligned_cols=211  Identities=19%  Similarity=0.295  Sum_probs=165.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      .......+..|+.++++|+||||++++++|...  ..+|+||||+++|+|.+++...             ......+++.
T Consensus        52 ~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~-------------~~~~g~L~E~  118 (1021)
T PTZ00266         52 KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKC-------------YKMFGKIEEH  118 (1021)
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHH-------------hhccCCCCHH
Confidence            345667899999999999999999999988543  5689999999999998877521             1113468999


Q ss_pred             HHHHHHHHHHHHHHHHHhC-------CcccccCCCCceeccc-------------------------ccCccccccC---
Q 037274           85 CLAIAHKETLKGLSYLQGE-------GLFHKNISAGHILHNI-------------------------FNDDTRNWIS---  129 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~-------~ivH~dlkp~nil~~~-------------------------f~~~~~~~~~---  129 (245)
                      .++.++.||+.||.|||+.       +|+|+||||+|||++.                         ||++......   
T Consensus       119 ~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~  198 (1021)
T PTZ00266        119 AIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMA  198 (1021)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccc
Confidence            9999999999999999984       4999999999999841                         5655433221   


Q ss_pred             CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcc
Q 037274          130 SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR  209 (245)
Q Consensus       130 ~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (245)
                      ....+|+.|+|||++.+....++.++|||||||++|+|++|..||.................     ..        ...
T Consensus       199 ~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p-----~l--------pi~  265 (1021)
T PTZ00266        199 HSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGP-----DL--------PIK  265 (1021)
T ss_pred             cccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCC-----CC--------CcC
Confidence            23456999999999875345688999999999999999999999987555443332222110     00        113


Q ss_pred             cccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          210 TLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       210 ~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..+.++.+||..||+.+|.+||++.+++.|+|+.
T Consensus       266 ~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik  299 (1021)
T PTZ00266        266 GKSKELNILIKNLLNLSAKERPSALQCLGYQIIK  299 (1021)
T ss_pred             CCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence            4678999999999999999999999999999974

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=3.6e-37  Score=241.16  Aligned_cols=217  Identities=15%  Similarity=0.230  Sum_probs=167.4

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|++++++++||||+++++++...+..++++||+++++|.+++............. ........+++..+
T Consensus        48 ~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~-~~~~~~~~l~~~~~  126 (283)
T cd05048          48 EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAES-GDETVKSSLDCSDF  126 (283)
T ss_pred             CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCccccccc-ccccccCCCCHHHH
Confidence            34566779999999999999999999999998889999999999999988886432211100000 00111246888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||+|||++|++|+||||+||+++.        ||.+.......      ...+++.|+|||.+..  ..++
T Consensus       127 ~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  204 (283)
T cd05048         127 LHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY--GKFT  204 (283)
T ss_pred             HHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhcc--CcCc
Confidence            999999999999999999999999999999976        66654332211      2334678999999876  5589


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|||||||++|+|++ |..||.+....+....+......             ..+..+++++.+++.+||+.||.+||
T Consensus       205 ~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~~~~l~~~c~~~~p~~Rp  271 (283)
T cd05048         205 TESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL-------------PCPEDCPARVYALMIECWNEIPARRP  271 (283)
T ss_pred             hhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-------------CCcccCCHHHHHHHHHHccCChhhCc
Confidence            99999999999999997 99999886665555443322110             11256789999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      ++.+++++
T Consensus       272 ~~~~i~~~  279 (283)
T cd05048         272 RFKDIHTR  279 (283)
T ss_pred             CHHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-37  Score=238.90  Aligned_cols=208  Identities=27%  Similarity=0.418  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++||||+++++++...+..++++||+++++|.+++..                ....+++..+..
T Consensus        42 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~----------------~~~~l~~~~~~~  105 (262)
T cd06613          42 DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQV----------------TRGPLSELQIAY  105 (262)
T ss_pred             hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHh----------------hccCCCHHHHHH
Confidence            3678899999999999999999999999999999999999999999776652                124688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCC-CCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFG-DDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~-~~~~~~~~  155 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....++..|+|||.+... ...++.++
T Consensus       106 ~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~  185 (262)
T cd06613         106 VCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKC  185 (262)
T ss_pred             HHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchh
Confidence            9999999999999999999999999999986        5554433221    123457789999998762 12678899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||||+++|+|++|..||.................       ...  .......++.++.+++++||..+|.+|||+++
T Consensus       186 Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  256 (262)
T cd06613         186 DIWALGITAIELAELQPPMFDLHPMRALFLISKSNF-------PPP--KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATK  256 (262)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC-------CCc--cccchhhhhHHHHHHHHHHcCCChhhCCCHHH
Confidence            999999999999999999987554443332222110       000  00112456788999999999999999999999


Q ss_pred             Hhhccc
Q 037274          236 QVLQEM  241 (245)
Q Consensus       236 ~l~~~~  241 (245)
                      ++.|+|
T Consensus       257 il~~~~  262 (262)
T cd06613         257 LLQHPF  262 (262)
T ss_pred             HhcCCC
Confidence            999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-37  Score=246.45  Aligned_cols=206  Identities=20%  Similarity=0.278  Sum_probs=166.5

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+..|+++++.++|+||+++++.+..++..++++||+.+++|.+++..               .....+++..+..
T Consensus        43 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---------------~~~~~l~~~~~~~  107 (316)
T cd05574          43 NKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQR---------------QPGKCLSEEVARF  107 (316)
T ss_pred             HHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHh---------------CCCCccCHHHHHH
Confidence            3667899999999999999999999999999999999999999999776642               1235688899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------------------------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------------------------------  129 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------------------------------  129 (245)
                      ++.|++.||+|||+.|++|+||||+||+++.        ||.+......                               
T Consensus       108 ~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (316)
T cd05574         108 YAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSF  187 (316)
T ss_pred             HHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccC
Confidence            9999999999999999999999999999975        4443322111                               


Q ss_pred             --CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCC
Q 037274          130 --SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHG  207 (245)
Q Consensus       130 --~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (245)
                        ....++..|+|||.+.+  ..++.++||||||+++|++++|..||...+.............     ..+       .
T Consensus       188 ~~~~~~g~~~y~aPE~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-----~~~-------~  253 (316)
T cd05574         188 RSNSFVGTEEYIAPEVISG--DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEV-----TFP-------G  253 (316)
T ss_pred             CCCCCcCccCCcCHHHHcC--CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCc-----cCC-------C
Confidence              01245778999999987  5688999999999999999999999987666555444332111     000       1


Q ss_pred             cccccHHHHHHHHHhcCCCCCCCcc----HHHHhhccccc
Q 037274          208 TRTLSKNFWNMVKICLAPDPAKRPA----AEAQVLQEMWH  243 (245)
Q Consensus       208 ~~~~~~~~~~li~~~l~~~p~~Rpt----~~~~l~~~~f~  243 (245)
                      ....+..+.+++.+||..+|++|||    ++++++||||.
T Consensus       254 ~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~  293 (316)
T cd05574         254 SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR  293 (316)
T ss_pred             ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhh
Confidence            1337899999999999999999999    99999999985

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.3e-37  Score=238.80  Aligned_cols=205  Identities=16%  Similarity=0.217  Sum_probs=166.7

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.++++++||||+++++.+...+..++++||+.+++|.+++..               .....+++..+.
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---------------~~~~~~~~~~~~  104 (256)
T cd08218          40 PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINA---------------QRGVLFPEDQIL  104 (256)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHh---------------ccCCCCCHHHHH
Confidence            34567899999999999999999999999999999999999999999766642               123457888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.|+.|||++|++|+||+|+||+++.        ||.+.......    ...+++.|+|||.+.+  ...+.++
T Consensus       105 ~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~  182 (256)
T cd08218         105 DWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICEN--RPYNNKS  182 (256)
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCC--CCCCCcc
Confidence            99999999999999999999999999999875        55544332211    2335788999999986  5588899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||||++++++++|+.||...+..+....+.....       +      ..+...+.++.++|.+||+.+|.+||++.+
T Consensus       183 Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  249 (256)
T cd08218         183 DIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY-------P------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNS  249 (256)
T ss_pred             chhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC-------C------CCcccCCHHHHHHHHHHhhCChhhCcCHHH
Confidence            999999999999999999987665555444432211       0      012457889999999999999999999999


Q ss_pred             Hhhcccc
Q 037274          236 QVLQEMW  242 (245)
Q Consensus       236 ~l~~~~f  242 (245)
                      +++||||
T Consensus       250 vl~~~~~  256 (256)
T cd08218         250 ILEKNFI  256 (256)
T ss_pred             HhhCcCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=6e-38  Score=249.71  Aligned_cols=200  Identities=17%  Similarity=0.163  Sum_probs=160.1

Q ss_pred             HHHHHHHHH-HHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           11 YAKLAREIY-RYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        11 ~~~~~~E~~-~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ...+..|.. +++.++||||+++++.+.+.+..++||||+++++|...+..                 ...+++..+..+
T Consensus        39 ~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~  101 (321)
T cd05603          39 QNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQR-----------------ERCFLEPRARFY  101 (321)
T ss_pred             HHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-----------------cCCCCHHHHHHH
Confidence            445555654 67889999999999999999999999999999999655531                 345788889999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.||+.||.|||+.|++||||||+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.++||
T Consensus       102 ~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di  179 (321)
T cd05603         102 AAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRK--EPYDRTVDW  179 (321)
T ss_pred             HHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcC--CCCCCcCcc
Confidence            999999999999999999999999999875        776543211    123456899999999976  568899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH----
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA----  233 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~----  233 (245)
                      |||||++|+|++|..||...+.......+....       .       ..+...+..+.+++.+||+.||.+||++    
T Consensus       180 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-------~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (321)
T cd05603         180 WCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP-------L-------QLPGGKTVAACDLLVGLLHKDQRRRLGAKADF  245 (321)
T ss_pred             cccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC-------C-------CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCH
Confidence            999999999999999998866555444433211       0       1114567889999999999999999975    


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      .++++|+||.
T Consensus       246 ~~~~~~~~~~  255 (321)
T cd05603         246 LEIKNHVFFS  255 (321)
T ss_pred             HHHhCCCCcC
Confidence            5899999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=7.5e-38  Score=248.80  Aligned_cols=222  Identities=19%  Similarity=0.256  Sum_probs=156.1

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+|+.++++++||||+++++++..  +...++++||+++ +|.+++......        ........+++..+..
T Consensus        42 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~--------~~~~~~~~l~~~~~~~  112 (317)
T cd07867          42 SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRAS--------KANKKPMQLPRSMVKS  112 (317)
T ss_pred             cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhcc--------ccCCCCccCCHHHHHH
Confidence            3467899999999999999999998854  4568999999875 776666421110        0011223588899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceecc------------cccCccccccC-------CCCccccccccCceecCCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHN------------IFNDDTRNWIS-------SSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~------------~f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~  149 (245)
                      ++.|++.||.|||+.|++||||||+||++.            +||++......       ....+|+.|+|||.+.+ ..
T Consensus       113 i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~  191 (317)
T cd07867         113 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG-AR  191 (317)
T ss_pred             HHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcC-CC
Confidence            999999999999999999999999999983            17776543321       12345889999999875 34


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCch---------HHHHHHHhcCCCCccC--------------CC-------C
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDL---------DIMTKMLMKQPKSTSL--------------QV-------A  199 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~~--------------~~-------~  199 (245)
                      .++.++|||||||++|+|++|.+||......         ................              ..       .
T Consensus       192 ~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (317)
T cd07867         192 HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYA  271 (317)
T ss_pred             ccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccC
Confidence            5789999999999999999999999754321         1111111110000000              00       0


Q ss_pred             CCC---CCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          200 PNE---DTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       200 ~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      ...   .........+..+.+++.+||+.||.+|||++++++||||
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         272 NSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            000   0000112345678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-39  Score=241.85  Aligned_cols=213  Identities=25%  Similarity=0.372  Sum_probs=176.1

Q ss_pred             ccccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            2 IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         2 ~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      |+.-..+.+.+++..|+.++++.+.|++|++||.+.....+|+|||||..|++++.++-                .+..+
T Consensus        63 IK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~----------------R~K~L  126 (502)
T KOG0574|consen   63 IKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRA----------------RRKPL  126 (502)
T ss_pred             EEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHH----------------hcCCc
Confidence            34455667889999999999999999999999999888889999999999999887752                24679


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~  149 (245)
                      .++++..+++..++||.|||...-+|||||+.|||++.        ||.+.....    ..+..|||.|||||++..  -
T Consensus       127 ~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~E--I  204 (502)
T KOG0574|consen  127 SEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEE--I  204 (502)
T ss_pred             cHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHH--h
Confidence            99999999999999999999999999999999999987        555443322    235667999999999987  7


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      .|+.++||||||+...||..|++||.+-   -.+..++...      ..++  ....-+..+|.++.+++++||..+|++
T Consensus       205 GY~~~ADIWSLGITaIEMAEG~PPYsDI---HPMRAIFMIP------T~PP--PTF~KPE~WS~~F~DFi~~CLiK~PE~  273 (502)
T KOG0574|consen  205 GYDTKADIWSLGITAIEMAEGRPPYSDI---HPMRAIFMIP------TKPP--PTFKKPEEWSSEFNDFIRSCLIKKPEE  273 (502)
T ss_pred             ccchhhhHhhhcchhhhhhcCCCCcccc---cccceeEecc------CCCC--CCCCChHhhhhHHHHHHHHHhcCCHHH
Confidence            7999999999999999999999999873   3333333322      1111  122233778999999999999999999


Q ss_pred             CccHHHHhhccccc
Q 037274          230 RPAAEAQVLQEMWH  243 (245)
Q Consensus       230 Rpt~~~~l~~~~f~  243 (245)
                      |-|+.++++|+|-+
T Consensus       274 R~TA~~L~~H~Fik  287 (502)
T KOG0574|consen  274 RKTALRLCEHTFIK  287 (502)
T ss_pred             HHHHHHHhhhhhhc
Confidence            99999999999853

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-37  Score=248.11  Aligned_cols=209  Identities=14%  Similarity=0.206  Sum_probs=164.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+++.++|+||+++++++.+++..++||||+++|+|.+++..                ....+++..+..+
T Consensus        44 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~----------------~~~~~~~~~~~~~  107 (331)
T cd05597          44 ETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSK----------------FEDRLPEDMARFY  107 (331)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHH----------------hcCCCCHHHHHHH
Confidence            456688999999999999999999999999999999999999999776642                1345888999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecC---CCCCCCc
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNF---GDDYYSC  153 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~---~~~~~~~  153 (245)
                      +.|++.||+|||++|++||||||+||+++.        ||.+.......     ...+|+.|+|||++..   +...++.
T Consensus       108 ~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  187 (331)
T cd05597         108 LAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGP  187 (331)
T ss_pred             HHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCC
Confidence            999999999999999999999999999975        77654432221     2347999999999873   2345788


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC--Cc
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK--RP  231 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp  231 (245)
                      ++|||||||++|+|++|+.||...+..+....+.....   ....+.      ....+++.+.+++++|+..++++  |+
T Consensus       188 ~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~~------~~~~~~~~~~~li~~ll~~~~~r~~r~  258 (331)
T cd05597         188 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE---HFQFPP------DVTDVSEEAKDLIRRLICSPETRLGRN  258 (331)
T ss_pred             cceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCC---cccCCC------ccCCCCHHHHHHHHHHccCcccccCCC
Confidence            99999999999999999999988665555544433221   111111      11347889999999988654443  88


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      +++++++||||.
T Consensus       259 ~~~~~l~hp~~~  270 (331)
T cd05597         259 GLQDFKDHPFFE  270 (331)
T ss_pred             CHHHHhcCCCCC
Confidence            999999999984

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=2.5e-37  Score=239.40  Aligned_cols=204  Identities=17%  Similarity=0.252  Sum_probs=165.1

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+++++.++||||+++++.+.+++..++++||+++++|.+++..                 ...+++..+..
T Consensus        35 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~   97 (262)
T cd05572          35 GQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD-----------------RGLFDEYTARF   97 (262)
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh-----------------cCCCCHHHHHH
Confidence            4567899999999999999999999999999999999999999999777652                 23478889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      ++.|++.||.|||++|++|+||+|+||+++.        ||.+......   ....+++.|+|||.+.+  ..++.++|+
T Consensus        98 ~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~Di  175 (262)
T cd05572          98 YIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILN--KGYDFSVDY  175 (262)
T ss_pred             HHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcC--CCCCChhhh
Confidence            9999999999999999999999999999875        6655444332   12345889999999876  568899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCC--chHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc---
Q 037274          158 WLIGITALQFPCGGLPVSRRQ--DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA---  232 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---  232 (245)
                      ||||+++|++++|..||....  ............   ...         ..+...++++.+++.+||+.+|.+||+   
T Consensus       176 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~---------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~  243 (262)
T cd05572         176 WSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN---GKL---------EFPNYIDKAAKDLIKQLLRRNPEERLGNLK  243 (262)
T ss_pred             hhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC---CCC---------CCCcccCHHHHHHHHHHccCChhhCcCCcc
Confidence            999999999999999998765  333333322111   000         111334789999999999999999999   


Q ss_pred             --HHHHhhccccc
Q 037274          233 --AEAQVLQEMWH  243 (245)
Q Consensus       233 --~~~~l~~~~f~  243 (245)
                        +.++++||||.
T Consensus       244 ~~~~~l~~~~~~~  256 (262)
T cd05572         244 GGIKDIKKHKWFN  256 (262)
T ss_pred             cCHHHHhcChhhh
Confidence              99999999983

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-38  Score=263.54  Aligned_cols=203  Identities=21%  Similarity=0.310  Sum_probs=162.5

Q ss_pred             ccHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEe----C---ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhcc
Q 037274            6 HQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMIS----Q---RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRH   77 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~----~---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~   77 (245)
                      .+++..+.+.+||++|++|+ |+|||.+++....    .   -+.+|+||||.+|.|-+++.               .+.
T Consensus        73 ~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn---------------~Rl  137 (738)
T KOG1989|consen   73 NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMN---------------TRL  137 (738)
T ss_pred             CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHH---------------HHH
Confidence            47788999999999999997 9999999994321    1   25899999999999965554               344


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHhCC--cccccCCCCceeccc--------ccCccccccCCC-------------Ccc
Q 037274           78 RYGITVDCLAIAHKETLKGLSYLQGEG--LFHKNISAGHILHNI--------FNDDTRNWISSS-------------SSI  134 (245)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lh~~~--ivH~dlkp~nil~~~--------f~~~~~~~~~~~-------------~~~  134 (245)
                      ...+++.+++.|+.|+++|+++||...  |+|||||.+|||++.        ||.+.-......             ...
T Consensus       138 q~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~T  217 (738)
T KOG1989|consen  138 QTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYT  217 (738)
T ss_pred             hccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhC
Confidence            566999999999999999999999987  999999999999997        776544333221             122


Q ss_pred             ccccccCceecC-CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccH
Q 037274          135 TTWAAAPEVVNF-GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSK  213 (245)
Q Consensus       135 ~~~y~aPE~~~~-~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (245)
                      |+.|+|||++.- +....+.|+|||+|||+||-+++...||.......++..         .+..++.       ..++.
T Consensus       218 Tp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng---------~Y~~P~~-------p~ys~  281 (738)
T KOG1989|consen  218 TPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNG---------NYSFPPF-------PNYSD  281 (738)
T ss_pred             CccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEec---------cccCCCC-------ccHHH
Confidence            999999999975 345678999999999999999999999998544332211         1122221       57899


Q ss_pred             HHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          214 NFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       214 ~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      .+.+||+.||++||++||++.+++.+
T Consensus       282 ~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  282 RLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             HHHHHHHHHhccCcccCCCHHHHHHH
Confidence            99999999999999999999998754

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=2.1e-37  Score=242.30  Aligned_cols=208  Identities=25%  Similarity=0.402  Sum_probs=160.8

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEe------CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMIS------QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      ......+..|+.+++++ +|+||+++++++..      .+..+++|||+++|+|.+++..               .....
T Consensus        53 ~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~---------------~~~~~  117 (282)
T cd06636          53 EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKN---------------TKGNA  117 (282)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHH---------------ccCCC
Confidence            34556788999999998 69999999999853      4568999999999999777652               12345


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCC-
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFG-  147 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~-  147 (245)
                      +++..+..++.|++.||.|||+.|++|+||+|+||+++.        ||.+.....    .....+++.|+|||.+... 
T Consensus       118 ~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~  197 (282)
T cd06636         118 LKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE  197 (282)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCccc
Confidence            778889999999999999999999999999999999986        555443221    1234468899999998631 


Q ss_pred             --CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCC
Q 037274          148 --DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP  225 (245)
Q Consensus       148 --~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  225 (245)
                        ...++.++|+||||+++|+|++|..||................         .   .......++..+.++|++||+.
T Consensus       198 ~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~---------~---~~~~~~~~~~~~~~li~~cl~~  265 (282)
T cd06636         198 NPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP---------P---PKLKSKKWSKKFIDFIEGCLVK  265 (282)
T ss_pred             CcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCC---------C---CCCcccccCHHHHHHHHHHhCC
Confidence              2457789999999999999999999997654333222211111         0   0011145788999999999999


Q ss_pred             CCCCCccHHHHhhcccc
Q 037274          226 DPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       226 ~p~~Rpt~~~~l~~~~f  242 (245)
                      ||.+|||+.++++||||
T Consensus       266 ~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         266 NYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             ChhhCcCHHHHhcCCCC
Confidence            99999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=3.4e-37  Score=241.53  Aligned_cols=217  Identities=16%  Similarity=0.220  Sum_probs=166.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.++++++||||+++++++..++..++|+|++ +++|.+++..                ....+++..++.
T Consensus        41 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~----------------~~~~~~~~~~~~  103 (286)
T cd07832          41 GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRD----------------EERPLPEAQVKS  103 (286)
T ss_pred             hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHh----------------cCCCCCHHHHHH
Confidence            44678999999999999999999999999999999999999 8999776642                124588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----CCCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.+......     ....++..|+|||.+.+ ...++.++
T Consensus       104 ~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~  182 (286)
T cd07832         104 YMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYG-ARKYDPGV  182 (286)
T ss_pred             HHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeec-cccCCchh
Confidence            9999999999999999999999999999875        5554433322     13445889999999864 34568999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc----------------CCCCCCCCCCCCcccccHHHHHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS----------------LQVAPNEDTTHGTRTLSKNFWNMV  219 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~li  219 (245)
                      ||||||+++++|++|.++|.+..+................                ................+..+.+++
T Consensus       183 Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  262 (286)
T cd07832         183 DLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLL  262 (286)
T ss_pred             HHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHH
Confidence            9999999999999998888776665555444432211110                000000000001134568899999


Q ss_pred             HHhcCCCCCCCccHHHHhhccccc
Q 037274          220 KICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       220 ~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+||..+|.+|||++++++||||.
T Consensus       263 ~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         263 KGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             HHHhccChhhCCCHHHHhhCcCcC
Confidence            999999999999999999999983

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=5.6e-37  Score=239.38  Aligned_cols=208  Identities=16%  Similarity=0.270  Sum_probs=162.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .......+.+|+.++++++|+||+++++++.+.+..++++||+++++|.+++.....          .......+++..+
T Consensus        49 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~----------~~~~~~~~~~~~~  118 (277)
T cd05036          49 SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRP----------RPERPSSLTMKDL  118 (277)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCC----------CCCCCCCCCHHHH
Confidence            344567799999999999999999999999888899999999999999888864211          0111235889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC------CCccccccccCceecCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS------SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~  149 (245)
                      ..++.||+.||+|||+++++|+||||+||+++.           ||.+.......      ....+..|+|||.+.+  .
T Consensus       119 ~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~  196 (277)
T cd05036         119 LFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD--G  196 (277)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhc--C
Confidence            999999999999999999999999999999964           55544332111      1112457999999986  5


Q ss_pred             CCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      .++.++|||||||++|+|++ |..||...+.......+....      ..       ..+..++..+.+++.+||+.+|+
T Consensus       197 ~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~~i~~cl~~~p~  263 (277)
T cd05036         197 IFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG------RL-------DPPKGCPGPVYRIMTDCWQHTPE  263 (277)
T ss_pred             CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC------cC-------CCCCCCCHHHHHHHHHHcCCCcc
Confidence            58999999999999999996 999998766555443332211      00       11245788999999999999999


Q ss_pred             CCccHHHHhhc
Q 037274          229 KRPAAEAQVLQ  239 (245)
Q Consensus       229 ~Rpt~~~~l~~  239 (245)
                      +||++.++++|
T Consensus       264 ~Rps~~~vl~~  274 (277)
T cd05036         264 DRPNFATILER  274 (277)
T ss_pred             cCcCHHHHHHH
Confidence            99999999976

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=4.8e-37  Score=237.11  Aligned_cols=198  Identities=19%  Similarity=0.350  Sum_probs=159.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+++.+|+++++.++||||+++++++...+..+++|||+++|+|.+++..                ....+++..+..+
T Consensus        42 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~  105 (256)
T cd05114          42 SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQ----------------RQGKLSKDMLLSM  105 (256)
T ss_pred             cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHh----------------CccCCCHHHHHHH
Confidence            456789999999999999999999999999999999999999999776642                1234788899999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||.|||++|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+  ..++.++|
T Consensus       106 ~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  183 (256)
T cd05114         106 CQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNF--SKYSSKSD  183 (256)
T ss_pred             HHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhccc--Cccchhhh
Confidence            999999999999999999999999999976        55544322111     1122457999999986  56889999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      +||||+++|++++ |+.||...+..+....+....      ...       .+...+..+.+++.+||+.+|.+||++++
T Consensus       184 i~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~------~~~-------~~~~~~~~~~~li~~c~~~~p~~Rps~~~  250 (256)
T cd05114         184 VWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF------RLY-------RPKLASMTVYEVMYSCWHEKPEGRPTFAE  250 (256)
T ss_pred             hHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC------CCC-------CCCCCCHHHHHHHHHHccCCcccCcCHHH
Confidence            9999999999999 899998876655555543321      110       11345788999999999999999999999


Q ss_pred             Hhh
Q 037274          236 QVL  238 (245)
Q Consensus       236 ~l~  238 (245)
                      +++
T Consensus       251 l~~  253 (256)
T cd05114         251 LLR  253 (256)
T ss_pred             HHH
Confidence            986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.8e-37  Score=244.41  Aligned_cols=204  Identities=22%  Similarity=0.323  Sum_probs=163.5

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.+++.++|+||+++++++..++..++|+||+++++|.+++.                  ...+++..+..
T Consensus        58 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~------------------~~~~~~~~~~~  119 (297)
T cd06656          58 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT------------------ETCMDEGQIAA  119 (297)
T ss_pred             chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHH------------------hCCCCHHHHHH
Confidence            345678999999999999999999999999999999999999999977664                  23467888999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||+.|++|+||||+||+++.        ||.+.......    ...+++.|+|||.+.+  ..++.++|
T Consensus       120 ~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  197 (297)
T cd06656         120 VCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--KAYGPKVD  197 (297)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcC--CCCCcHHH
Confidence            9999999999999999999999999999875        66554332221    2345889999999986  56889999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      +||||+++|++++|..||...+...........           .......+..++..+.+++.+||..+|++||+++++
T Consensus       198 i~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  266 (297)
T cd06656         198 IWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-----------GTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKEL  266 (297)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcchheeeeccC-----------CCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            999999999999999999775432221111000           000111225577889999999999999999999999


Q ss_pred             hhccccc
Q 037274          237 VLQEMWH  243 (245)
Q Consensus       237 l~~~~f~  243 (245)
                      ++||||.
T Consensus       267 l~~~~~~  273 (297)
T cd06656         267 LQHPFLK  273 (297)
T ss_pred             hcCchhc
Confidence            9999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=5.9e-37  Score=240.85  Aligned_cols=214  Identities=13%  Similarity=0.234  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++|+||+++++++...+..++||||+++++|.+++............ .........+++..++.
T Consensus        49 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  127 (291)
T cd05094          49 AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD-GQPRQAKGELGLSQMLH  127 (291)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccc-cccccCcCCCCHHHHHH
Confidence            34567999999999999999999999999999999999999999999988643321111000 00011224588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCCch
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ++.|++.||+|||++|++|+||||+||+++.        ||.+......      ....++..|+|||.+.+  ..++.+
T Consensus       128 i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  205 (291)
T cd05094         128 IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY--RKFTTE  205 (291)
T ss_pred             HHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc--CCCCch
Confidence            9999999999999999999999999999975        6665433221      12334678999999987  568899


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +||||||+++|+|++ |..||..................             ......+..+.+++.+||+.+|++|||+
T Consensus       206 ~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~  272 (291)
T cd05094         206 SDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVL-------------ERPRVCPKEVYDIMLGCWQREPQQRLNI  272 (291)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCC-------------CCCccCCHHHHHHHHHHcccChhhCcCH
Confidence            999999999999998 99999876665554443222110             0114467899999999999999999999


Q ss_pred             HHHhh
Q 037274          234 EAQVL  238 (245)
Q Consensus       234 ~~~l~  238 (245)
                      .++++
T Consensus       273 ~~v~~  277 (291)
T cd05094         273 KEIYK  277 (291)
T ss_pred             HHHHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=6.2e-37  Score=239.84  Aligned_cols=218  Identities=16%  Similarity=0.262  Sum_probs=164.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.++++++||||+++++++..++..+++|||+++++|.+++......................+++..+
T Consensus        47 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (283)
T cd05090          47 NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF  126 (283)
T ss_pred             CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHH
Confidence            34556789999999999999999999999999999999999999999988885332111100000000011235788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||.|||++|++|+||||+||+++.        ||++.......      ...++..|+|||.+.+  ..++
T Consensus       127 ~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  204 (283)
T cd05090         127 LHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY--GKFS  204 (283)
T ss_pred             HHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhcc--CCCC
Confidence            999999999999999999999999999999976        66665432211      2233567999999976  5589


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|+||||+++|+|++ |..||.+...............      .       ..+..+++.+.+++.+||+.||.+||
T Consensus       205 ~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~li~~cl~~~p~~Rp  271 (283)
T cd05090         205 SDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQL------L-------PCSEDCPPRMYSLMTECWQEGPSRRP  271 (283)
T ss_pred             chhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc------C-------CCCCCCCHHHHHHHHHHcccCcccCc
Confidence            99999999999999998 8899987555444443322110      0       01145788999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      ++.+++++
T Consensus       272 ~~~~i~~~  279 (283)
T cd05090         272 RFKDIHTR  279 (283)
T ss_pred             CHHHHHHH
Confidence            99998865

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=5.8e-38  Score=242.55  Aligned_cols=204  Identities=25%  Similarity=0.385  Sum_probs=162.2

Q ss_pred             HHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHH
Q 037274           13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKE   92 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q   92 (245)
                      ...+|+.++++++||||+++++++..++..++++|++++++|.+++.                 ....+++..+..++.|
T Consensus        44 ~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-----------------~~~~~~~~~~~~~~~q  106 (260)
T PF00069_consen   44 ENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-----------------KNKPLSEEEILKIAYQ  106 (260)
T ss_dssp             HHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-----------------HHSSBBHHHHHHHHHH
T ss_pred             hhhhhhhcccccccccccccccccccccccccccccccccccccccc-----------------cccccccccccccccc
Confidence            34569999999999999999999999999999999999999977664                 1356899999999999


Q ss_pred             HHHHHHHHHhCCcccccCCCCceeccc--------ccCccc----cccCCCCccccccccCceec-CCCCCCCchhhHHH
Q 037274           93 TLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTR----NWISSSSSITTWAAAPEVVN-FGDDYYSCKSDIWL  159 (245)
Q Consensus        93 i~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~----~~~~~~~~~~~~y~aPE~~~-~~~~~~~~~~Dvws  159 (245)
                      ++.||.+||+.|++|+||||+||+++.        ||.+..    ........+++.|+|||.+. +  ...+.++|+||
T Consensus       107 i~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~s  184 (260)
T PF00069_consen  107 ILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQG--KKYTRKSDIWS  184 (260)
T ss_dssp             HHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTT--SSBSTHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccc
Confidence            999999999999999999999999985        666543    22222455688999999987 4  66899999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ||+++++|++|..||......+...................       ....++.+.+++..||+.||++||++.++++|
T Consensus       185 lG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  185 LGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQ-------SREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             HHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTS-------HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             cccccccccccccccccccchhhhhhhhhcccccccccccc-------cchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            99999999999999998633333322222221111111000       01224899999999999999999999999999


Q ss_pred             ccc
Q 037274          240 EMW  242 (245)
Q Consensus       240 ~~f  242 (245)
                      |||
T Consensus       258 ~~~  260 (260)
T PF00069_consen  258 PWF  260 (260)
T ss_dssp             GGG
T ss_pred             CCC
Confidence            998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=6.3e-37  Score=242.44  Aligned_cols=208  Identities=24%  Similarity=0.378  Sum_probs=166.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.+++.++||||+++++++..++..++|+||+.+ ++.+++..                ....+++..+
T Consensus        55 ~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~----------------~~~~l~~~~~  117 (307)
T cd06607          55 SNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDILEV----------------HKKPLQEVEI  117 (307)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCC-CHHHHHHH----------------cccCCCHHHH
Confidence            345567899999999999999999999999999999999999984 77554431                1245888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCccccccccCceecC-CCCCCCchhhH
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSITTWAAAPEVVNF-GDDYYSCKSDI  157 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~~Dv  157 (245)
                      ..++.|++.||.|||+.|++|+||+|+||+++.        ||.+..........+++.|+|||.+.+ +...++.++||
T Consensus       118 ~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv  197 (307)
T cd06607         118 AAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDV  197 (307)
T ss_pred             HHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCceeeeccCCCCCCcccch
Confidence            999999999999999999999999999999976        666655544445567889999998853 23457889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|+|++|..||...+.......+.....         +   ......++..+.+++.+||+.+|.+||++.+++
T Consensus       198 ~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~---------~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il  265 (307)
T cd06607         198 WSLGITCIELAERKPPLFNMNAMSALYHIAQNDS---------P---TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELL  265 (307)
T ss_pred             HHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC---------C---CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence            9999999999999999987655444333221110         0   011134678999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      .||||.
T Consensus       266 ~~~~~~  271 (307)
T cd06607         266 KHRFVL  271 (307)
T ss_pred             cChhhc
Confidence            999985

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=6.6e-37  Score=237.09  Aligned_cols=199  Identities=20%  Similarity=0.221  Sum_probs=154.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +....+.+|+.++++++||||+++++++..+...++++||+++|+|..++..                ....+++..+..
T Consensus        46 ~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----------------~~~~~~~~~~~~  109 (262)
T cd05077          46 DISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHR----------------KSDVLTTPWKFK  109 (262)
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHh----------------cCCCCCHHHHHH
Confidence            3455788899999999999999999999988899999999999999665542                134588889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc---------------ccCccccccCCCCccccccccCceecCCCCCCCc
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI---------------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ++.|++.||+|||+.|++|+||||+||+++.               ||.+..........++..|+|||.+.. ...++.
T Consensus       110 i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~  188 (262)
T cd05077         110 VAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVED-SKNLSI  188 (262)
T ss_pred             HHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhhhcC-CCCCCc
Confidence            9999999999999999999999999999963               444433333333445788999998863 255789


Q ss_pred             hhhHHHHHHHHHHHh-hCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFP-CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|+|+ +|..||......+... .....     ...         ....++++.+++.+||+.||.+||+
T Consensus       189 ~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~-----~~~---------~~~~~~~~~~li~~cl~~dp~~Rp~  253 (262)
T cd05077         189 AADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQ-----CML---------VTPSCKELADLMTHCMNYDPNQRPF  253 (262)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcC-----ccC---------CCCChHHHHHHHHHHcCCChhhCcC
Confidence            999999999999998 5888887644332211 11110     000         1234578999999999999999999


Q ss_pred             HHHHhhc
Q 037274          233 AEAQVLQ  239 (245)
Q Consensus       233 ~~~~l~~  239 (245)
                      +.+++++
T Consensus       254 ~~~il~~  260 (262)
T cd05077         254 FRAIMRD  260 (262)
T ss_pred             HHHHHHh
Confidence            9999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=4.7e-37  Score=238.04  Aligned_cols=203  Identities=15%  Similarity=0.266  Sum_probs=161.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +....+.+.+|+++++.++|+||+++++++..++..++++||+++++|.+++..               .....+++..+
T Consensus        42 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---------------~~~~~l~~~~~  106 (263)
T cd05052          42 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE---------------CNRQEVNAVVL  106 (263)
T ss_pred             CchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHh---------------CCCCCCCHHHH
Confidence            334567899999999999999999999999999999999999999999776642               12345788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ..++.|++.||+|||++|++|+||||+||+++.        ||.+.......     ....++.|+|||.+.+  ..++.
T Consensus       107 ~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  184 (263)
T cd05052         107 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--NKFSI  184 (263)
T ss_pred             HHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhcc--CCCCc
Confidence            999999999999999999999999999999975        56554332221     1112567999999876  56889


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|+|++ |..||.+..............      ..       ..+...+.++.+++.+||+.+|++|||
T Consensus       185 ~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~cl~~~p~~Rp~  251 (263)
T cd05052         185 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY------RM-------ERPEGCPPKVYELMRACWQWNPSDRPS  251 (263)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC------CC-------CCCCCCCHHHHHHHHHHccCCcccCCC
Confidence            9999999999999998 899998765544433332211      11       112557899999999999999999999


Q ss_pred             HHHHhhc
Q 037274          233 AEAQVLQ  239 (245)
Q Consensus       233 ~~~~l~~  239 (245)
                      +.++++.
T Consensus       252 ~~~l~~~  258 (263)
T cd05052         252 FAEIHQA  258 (263)
T ss_pred             HHHHHHH
Confidence            9998764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.3e-37  Score=242.56  Aligned_cols=213  Identities=19%  Similarity=0.313  Sum_probs=166.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|++++++++|+||+++++.+..++..++++||+++++|.+++...              .....+++..+
T Consensus        39 ~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--------------~~~~~~~~~~~  104 (286)
T cd06622          39 DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGG--------------VATEGIPEDVL  104 (286)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhc--------------cccCCCCHHHH
Confidence            4556678999999999999999999999999999999999999999997766521              11236889999


Q ss_pred             HHHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCcccccc--CCCCccccccccCceecCCC----CCC
Q 037274           87 AIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWI--SSSSSITTWAAAPEVVNFGD----DYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~--~~~~~~~~~y~aPE~~~~~~----~~~  151 (245)
                      ..++.|++.||.|||+ .|++|+||+|+||+++.        ||.+.....  .....+++.|+|||.+.++.    ..+
T Consensus       105 ~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  184 (286)
T cd06622         105 RRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTY  184 (286)
T ss_pred             HHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCC
Confidence            9999999999999997 59999999999999976        665543321  22344578899999986522    235


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|+|||||++|++++|+.||................. ..     .+    ..+..+++++.+++.+||+.+|.+||
T Consensus       185 ~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~-----~~----~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (286)
T cd06622         185 TVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD-GD-----PP----TLPSGYSDDAQDFVAKCLNKIPNRRP  254 (286)
T ss_pred             CcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhh-cC-----CC----CCCcccCHHHHHHHHHHcccCcccCC
Confidence            7899999999999999999999976544333322221111 00     00    11144789999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      +++++++||||.
T Consensus       255 ~~~~l~~~~~~~  266 (286)
T cd06622         255 TYAQLLEHPWLV  266 (286)
T ss_pred             CHHHHhcChhhh
Confidence            999999999984

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.1e-37  Score=246.45  Aligned_cols=213  Identities=18%  Similarity=0.200  Sum_probs=164.0

Q ss_pred             cccccHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            3 DINHQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      .+..+.+....+.+|+..|.+|+ |.+||++|+|-..++.+|+|||+-+ .+|..++....                ...
T Consensus       395 ~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~----------------~~~  457 (677)
T KOG0596|consen  395 LLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKK----------------SID  457 (677)
T ss_pred             HhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhcc----------------CCC
Confidence            34567788899999999999995 9999999999999999999999876 49988776422                223


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-------ccCccccccCC------CCccccccccCceecCC-
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------FNDDTRNWISS------SSSITTWAAAPEVVNFG-  147 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~-  147 (245)
                      +.-.+..+..|++.|+.++|+.||||.||||.|+|+-.       ||.+.......      ..+||+.||+||.+... 
T Consensus       458 ~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~  537 (677)
T KOG0596|consen  458 PDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMS  537 (677)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhcc
Confidence            32378889999999999999999999999999999765       99887665544      56779999999998751 


Q ss_pred             --------CCCCCchhhHHHHHHHHHHHhhCCCCCCCCC-chHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHH
Q 037274          148 --------DDYYSCKSDIWLIGITALQFPCGGLPVSRRQ-DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM  218 (245)
Q Consensus       148 --------~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  218 (245)
                              +-..+.++|||||||+||+|++|+.||.... ....+..+....     ..++-+      .-.-..++.++
T Consensus       538 s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~-----~~Iefp------~~~~~~~li~~  606 (677)
T KOG0596|consen  538 SSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPN-----HEIEFP------DIPENDELIDV  606 (677)
T ss_pred             ccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCC-----cccccc------CCCCchHHHHH
Confidence                    1225688999999999999999999998722 112222221111     011111      01122348999


Q ss_pred             HHHhcCCCCCCCccHHHHhhccccc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +..||+.||.+||++.++|+|||-.
T Consensus       607 mK~CL~rdPkkR~si~eLLqhpFl~  631 (677)
T KOG0596|consen  607 MKCCLARDPKKRWSIPELLQHPFLQ  631 (677)
T ss_pred             HHHHHhcCcccCCCcHHHhcCcccc
Confidence            9999999999999999999999854

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.7e-37  Score=249.26  Aligned_cols=215  Identities=17%  Similarity=0.270  Sum_probs=160.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ...+.+.+|++++++++||||+++++++...      ...+++++++ +++|.+++.                  ...++
T Consensus        56 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~------------------~~~l~  116 (343)
T cd07878          56 IHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVK------------------CQKLS  116 (343)
T ss_pred             HHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHh------------------cCCCC
Confidence            3456688999999999999999999887543      3478999987 568866553                  24588


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCc
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +..+..++.|++.||.|||+.|++||||||+||+++.        ||++....... ...+++.|+|||.+.+ ...++.
T Consensus       117 ~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~  195 (343)
T cd07878         117 DEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLN-WMHYNQ  195 (343)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcC-CccCCc
Confidence            9999999999999999999999999999999999975        77665443322 3456899999999874 345789


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------CC--CCCCCCCCCcccccHHHH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------QV--APNEDTTHGTRTLSKNFW  216 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~--~~~~~~~~~~~~~~~~~~  216 (245)
                      ++|||||||++|+|++|..||.+.+..+....+..........               ..  .+...........++.+.
T Consensus       196 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (343)
T cd07878         196 TVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAI  275 (343)
T ss_pred             hhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHH
Confidence            9999999999999999999998766555444433221110000               00  000000001124567789


Q ss_pred             HHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          217 NMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       217 ~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +++.+||+.||.+|||+.++++||||.
T Consensus       276 ~li~~mL~~dp~~R~s~~ell~hp~~~  302 (343)
T cd07878         276 DLLEKMLVLDSDKRISASEALAHPYFS  302 (343)
T ss_pred             HHHHHHcCCChhhCCCHHHHhcCcchh
Confidence            999999999999999999999999985

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=4.8e-37  Score=241.26  Aligned_cols=202  Identities=17%  Similarity=0.190  Sum_probs=166.6

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|++++++++||||+++++.+..++..++++||+++++|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-----------------~~~l~~~~~~~  105 (290)
T cd05580          43 KQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRK-----------------SGRFPEPVARF  105 (290)
T ss_pred             hHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHH-----------------cCCCCHHHHHH
Confidence            4567789999999999999999999999999999999999999999776642                 24688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-CCCccccccccCceecCCCCCCCchhhHHH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.+...... ....+++.|+|||.+.+  ...+.++|+||
T Consensus       106 ~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~s  183 (290)
T cd05580         106 YAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILS--KGYGKAVDWWA  183 (290)
T ss_pred             HHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcC--CCCCccccHHH
Confidence            9999999999999999999999999999976        6655443322 23346889999999876  45789999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----cHH
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----AAE  234 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~  234 (245)
                      ||+++|+|++|..||...........+....       .       ..+...+..+.+++.+||..+|.+|+     +++
T Consensus       184 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------~-------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~  249 (290)
T cd05580         184 LGILIYEMLAGYPPFFDDNPIQIYEKILEGK-------V-------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVN  249 (290)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------c-------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHH
Confidence            9999999999999998766444444333111       0       11144688999999999999999999     899


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||+
T Consensus       250 ~l~~~~~~~  258 (290)
T cd05580         250 DIKNHPWFA  258 (290)
T ss_pred             HHHcCcccc
Confidence            999999986

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=3.1e-37  Score=257.45  Aligned_cols=209  Identities=15%  Similarity=0.183  Sum_probs=168.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc--------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR--------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR   78 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~   78 (245)
                      +.+....+.+|+.++..++|+||+++++.+...+        ..++|+||+++|+|.+++...             ....
T Consensus        71 ~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~-------------~~~~  137 (496)
T PTZ00283         71 SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSR-------------AKTN  137 (496)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHh-------------hccC
Confidence            3556778899999999999999999988775432        368999999999998777521             1123


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------CCCCccccccccCcee
Q 037274           79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------SSSSSITTWAAAPEVV  144 (245)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------~~~~~~~~~y~aPE~~  144 (245)
                      ..+++..+..++.|++.||.|||+.|++||||||+||+++.        ||+++....      .....||+.|+|||.+
T Consensus       138 ~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~  217 (496)
T PTZ00283        138 RTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIW  217 (496)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHh
Confidence            56889999999999999999999999999999999999975        787654322      2234579999999999


Q ss_pred             cCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcC
Q 037274          145 NFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       145 ~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      .+  ..++.++||||||+++|+|++|+.||...+..............             ..+..+++++.+++.+||+
T Consensus       218 ~~--~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~li~~~L~  282 (496)
T PTZ00283        218 RR--KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYD-------------PLPPSISPEMQEIVTALLS  282 (496)
T ss_pred             CC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC-------------CCCCCCCHHHHHHHHHHcc
Confidence            87  66899999999999999999999999886655554443322110             1125578899999999999


Q ss_pred             CCCCCCccHHHHhhccccc
Q 037274          225 PDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .||.+||++.++++|||+.
T Consensus       283 ~dP~~RPs~~ell~~p~~~  301 (496)
T PTZ00283        283 SDPKRRPSSSKLLNMPICK  301 (496)
T ss_pred             cChhhCcCHHHHHhCHHHH
Confidence            9999999999999999875

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=4e-38  Score=227.92  Aligned_cols=210  Identities=20%  Similarity=0.252  Sum_probs=160.4

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC-----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ-----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ..++.+..++|++..++++|||+++++++...+     ...|++++|...|||.+.++..             ..++..+
T Consensus        58 ~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~-------------k~kg~~~  124 (302)
T KOG2345|consen   58 SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERL-------------KIKGNFV  124 (302)
T ss_pred             chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHH-------------hhcCCcc
Confidence            357899999999999999999999999886433     3499999999999998877632             1235579


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCC--cccccCCCCceeccc--------ccCccccccCC-------------CCcccccc
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEG--LFHKNISAGHILHNI--------FNDDTRNWISS-------------SSSITTWA  138 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~--ivH~dlkp~nil~~~--------f~~~~~~~~~~-------------~~~~~~~y  138 (245)
                      ++.+++.++.+|++||.+||+..  +.||||||.|||+++        ||........-             ....|..|
T Consensus       125 sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~py  204 (302)
T KOG2345|consen  125 SEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPY  204 (302)
T ss_pred             CHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcc
Confidence            99999999999999999999998  999999999999987        55543222111             22338999


Q ss_pred             ccCceecC-CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHH
Q 037274          139 AAPEVVNF-GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWN  217 (245)
Q Consensus       139 ~aPE~~~~-~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (245)
                      +|||++.- .....+.++|||||||++|.|++|..||.....          ..+....-+..+.........+|+.+.+
T Consensus       205 RAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----------~GgSlaLAv~n~q~s~P~~~~yse~l~~  274 (302)
T KOG2345|consen  205 RAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----------QGGSLALAVQNAQISIPNSSRYSEALHQ  274 (302)
T ss_pred             cCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh----------cCCeEEEeeeccccccCCCCCccHHHHH
Confidence            99999975 123467899999999999999999999975111          1111111111111112222458999999


Q ss_pred             HHHHhcCCCCCCCccHHHHhhc
Q 037274          218 MVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      +|+.||++||.+||++.+++.+
T Consensus       275 lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  275 LIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             HHHHHhcCCcccCCCHHHHHHH
Confidence            9999999999999999998864

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=9.5e-37  Score=239.34  Aligned_cols=212  Identities=14%  Similarity=0.257  Sum_probs=164.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.++++++||||+++++++...+..++++||+++++|.+++.........    .........+++..+.
T Consensus        48 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~----~~~~~~~~~l~~~~~~  123 (288)
T cd05093          48 DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVL----MAEGNRPAELTQSQML  123 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCcccc----ccccCCCCCCCHHHHH
Confidence            455678999999999999999999999999999999999999999998888643221111    0011123458999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||+|||++|++||||||+||+++.        ||.+......      ....+++.|+|||.+.+  ..++.
T Consensus       124 ~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  201 (288)
T cd05093         124 HIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY--RKFTT  201 (288)
T ss_pred             HHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc--CCCCc
Confidence            99999999999999999999999999999976        6655433211      12223668999999986  56889


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++|+||||+++|+|++ |..||...........+......             ......+.++.+++.+||+.||.+|||
T Consensus       202 ~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~l~~li~~~l~~~p~~Rpt  268 (288)
T cd05093         202 ESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL-------------QRPRTCPKEVYDLMLGCWQREPHMRLN  268 (288)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcC-------------CCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            9999999999999998 89999876655554444332210             011456789999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      +.+++.
T Consensus       269 ~~~v~~  274 (288)
T cd05093         269 IKEIHS  274 (288)
T ss_pred             HHHHHH
Confidence            999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.5e-37  Score=253.84  Aligned_cols=213  Identities=17%  Similarity=0.212  Sum_probs=157.7

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      ..+.+|++++++|+|+||+++++++..++..+++++++. ++|.+++..                ....+++..+..++.
T Consensus       205 ~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~----------------~~~~l~~~~~~~i~~  267 (461)
T PHA03211        205 ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGA----------------RLRPLGLAQVTAVAR  267 (461)
T ss_pred             cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHh----------------cCCCCCHHHHHHHHH
Confidence            456789999999999999999999999999999999996 577555531                123688999999999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCchhhH
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      |++.||.|||++||+||||||+|||++.        ||++.......      ...||+.|+|||++.+  ..++.++||
T Consensus       268 qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--~~~~~~sDv  345 (461)
T PHA03211        268 QLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAG--DPYTPSVDI  345 (461)
T ss_pred             HHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcC--CCCCchHHH
Confidence            9999999999999999999999999976        77765432211      2347999999999987  568999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCc-------hHHHHHHHhcCCC-CccCCC-----------------CCC---CCCCCCcc
Q 037274          158 WLIGITALQFPCGGLPVSRRQD-------LDIMTKMLMKQPK-STSLQV-----------------APN---EDTTHGTR  209 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~-------~~~~~~~~~~~~~-~~~~~~-----------------~~~---~~~~~~~~  209 (245)
                      |||||++|||++|..++.....       ......+...... ...+..                 ..+   ...+....
T Consensus       346 wSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  425 (461)
T PHA03211        346 WSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYY  425 (461)
T ss_pred             HHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhc
Confidence            9999999999998866543221       1112222221110 000000                 000   00000012


Q ss_pred             cccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          210 TLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       210 ~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..+..+.+||.+||+.||.+|||+.|+|+||||.
T Consensus       426 ~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~  459 (461)
T PHA03211        426 KLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQ  459 (461)
T ss_pred             cccchHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence            4566899999999999999999999999999996

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=2.9e-37  Score=241.77  Aligned_cols=216  Identities=20%  Similarity=0.319  Sum_probs=163.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+++..++++||+. ++|.+++..               .....+++..+..+
T Consensus        42 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~---------------~~~~~l~~~~~~~~  105 (284)
T cd07860          42 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDA---------------SPLSGIPLPLIKSY  105 (284)
T ss_pred             cchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHh---------------CCCCCCCHHHHHHH
Confidence            44678899999999999999999999999999999999996 588665542               22356889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||+|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.++|+
T Consensus       106 ~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv  184 (284)
T cd07860         106 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKYYSTAVDI  184 (284)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEec-CCCCCcHHHH
Confidence            999999999999999999999999999976        5554432221    12234778999999875 3346889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC-------------CCC--CCCCCCCCcccccHHHHHHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL-------------QVA--PNEDTTHGTRTLSKNFWNMVKIC  222 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~~li~~~  222 (245)
                      ||||+++|+|+||+.||...+..................             ...  ...........+++++.++|.+|
T Consensus       185 ~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  264 (284)
T cd07860         185 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQM  264 (284)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHh
Confidence            999999999999999998766655444433322111000             000  00000001134678899999999


Q ss_pred             cCCCCCCCccHHHHhhcccc
Q 037274          223 LAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       223 l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      |+.||.+|||++++++||||
T Consensus       265 l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         265 LHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             cCCCcccCCCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=3.5e-37  Score=249.66  Aligned_cols=218  Identities=18%  Similarity=0.268  Sum_probs=162.7

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhh-----------------
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAA-----------------   68 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~-----------------   68 (245)
                      ..+..+.+.+|+++++.+ +|+||+++++++...+..++||||+++|+|.+++..........                 
T Consensus        81 ~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (374)
T cd05106          81 HTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNI  160 (374)
T ss_pred             CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhcccccccccccccccccccc
Confidence            445567899999999999 89999999999999999999999999999999886421100000                 


Q ss_pred             ------------------------------------HHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCC
Q 037274           69 ------------------------------------TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISA  112 (245)
Q Consensus        69 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp  112 (245)
                                                          ............+++..+..++.|++.||.|||++|++||||||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp  240 (374)
T cd05106         161 TLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAA  240 (374)
T ss_pred             chhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCch
Confidence                                                00000111123578889999999999999999999999999999


Q ss_pred             Cceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhh-CCCCCCCC
Q 037274          113 GHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC-GGLPVSRR  177 (245)
Q Consensus       113 ~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~  177 (245)
                      +||+++.        ||++.......      ...+++.|+|||.+..  ..++.++||||||+++|+|++ |+.||...
T Consensus       241 ~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwSlGvil~ellt~G~~Pf~~~  318 (374)
T cd05106         241 RNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIFSLGKSPYPGI  318 (374)
T ss_pred             heEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcC--CCCCccccHHHHHHHHHHHHhCCCCCCccc
Confidence            9999975        77665432221      1123567999999976  568999999999999999997 99999875


Q ss_pred             CchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          178 QDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      ..............     ...       .+...++++.+++.+||+.||.+|||+.++++
T Consensus       319 ~~~~~~~~~~~~~~-----~~~-------~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         319 LVNSKFYKMVKRGY-----QMS-------RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             cccHHHHHHHHccc-----Ccc-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            44333322222110     000       11346789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=6.7e-37  Score=239.85  Aligned_cols=204  Identities=24%  Similarity=0.345  Sum_probs=164.1

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.+++.++||||+++++++...+..++++||+++++|.+++..                  ..+++..+..
T Consensus        58 ~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~------------------~~~~~~~~~~  119 (285)
T cd06648          58 QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH------------------TRMNEEQIAT  119 (285)
T ss_pred             hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh------------------CCCCHHHHHH
Confidence            3456789999999999999999999999999999999999999999776641                  3478889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||++||++|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.++|
T Consensus       120 ~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  197 (285)
T cd06648         120 VCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISR--LPYGTEVD  197 (285)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcC--CCCCCccc
Confidence            9999999999999999999999999999986        4433322111    12346889999999876  55889999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      +||||+++|++++|..||...+.............    ...       .....++..+.+++.+||+.+|++||++.++
T Consensus       198 v~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i  266 (285)
T cd06648         198 IWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP----PKL-------KNLHKVSPRLRSFLDRMLVRDPAQRATAAEL  266 (285)
T ss_pred             HHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC----CCC-------cccccCCHHHHHHHHHHcccChhhCcCHHHH
Confidence            99999999999999999987655444443322210    000       0113477899999999999999999999999


Q ss_pred             hhccccc
Q 037274          237 VLQEMWH  243 (245)
Q Consensus       237 l~~~~f~  243 (245)
                      ++||||.
T Consensus       267 l~~~~~~  273 (285)
T cd06648         267 LNHPFLA  273 (285)
T ss_pred             ccCcccc
Confidence            9999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=3e-37  Score=245.80  Aligned_cols=202  Identities=14%  Similarity=0.195  Sum_probs=165.1

Q ss_pred             HHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+.+..|+.+++.+. |++|+++++++.+.+..++||||+++|+|.+++..                 ...+++..+.
T Consensus        42 ~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-----------------~~~l~~~~~~  104 (323)
T cd05615          42 DDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-----------------VGKFKEPQAV  104 (323)
T ss_pred             hHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHH-----------------cCCCCHHHHH
Confidence            44567888999998886 57788899999999999999999999999666542                 3458899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||+.|++||||||+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.++
T Consensus       105 ~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  182 (323)
T cd05615         105 FYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAY--QPYGKSV  182 (323)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcC--CCCCCcc
Confidence            99999999999999999999999999999875        776553221    123447899999999986  5688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc---
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA---  232 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---  232 (245)
                      |+|||||++|+|++|..||.+.+.......+.....              ..+..++.++.+++.+||+.+|.+|++   
T Consensus       183 DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--------------~~p~~~~~~~~~li~~~l~~~p~~R~~~~~  248 (323)
T cd05615         183 DWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--------------SYPKSLSKEAVSICKGLMTKHPSKRLGCGP  248 (323)
T ss_pred             chhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------CCCccCCHHHHHHHHHHcccCHhhCCCCCC
Confidence            999999999999999999998766655555443221              011457889999999999999999997   


Q ss_pred             --HHHHhhccccc
Q 037274          233 --AEAQVLQEMWH  243 (245)
Q Consensus       233 --~~~~l~~~~f~  243 (245)
                        .+++++||||.
T Consensus       249 ~~~~~i~~h~~f~  261 (323)
T cd05615         249 EGERDIREHAFFR  261 (323)
T ss_pred             CCHHHHhcCcccC
Confidence              47899999986

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=9.2e-37  Score=241.31  Aligned_cols=205  Identities=17%  Similarity=0.256  Sum_probs=163.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+++++.++||||+++++.+..++..++++|++++++|.+++..                 ...+++..+..
T Consensus        43 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-----------------~~~~~~~~~~~  105 (305)
T cd05609          43 NQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKN-----------------IGALPVDMARM  105 (305)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHH-----------------cCCCCHHHHHH
Confidence            3456788999999999999999999999999999999999999999776642                 24578888999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-------------------CCCCccccccccC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-------------------SSSSSITTWAAAP  141 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-------------------~~~~~~~~~y~aP  141 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.++....                   .....++..|+||
T Consensus       106 ~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  185 (305)
T cd05609         106 YFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAP  185 (305)
T ss_pred             HHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCc
Confidence            9999999999999999999999999999986        555432100                   0012347789999


Q ss_pred             ceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHH
Q 037274          142 EVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       142 E~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  221 (245)
                      |.+..  ..++.++|+||||+++|++++|..||.+................       .+    .....++.++.+++.+
T Consensus       186 E~~~~--~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~li~~  252 (305)
T cd05609         186 EVILR--QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE-------WP----EGDEALPADAQDLISR  252 (305)
T ss_pred             hhccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC-------CC----CccccCCHHHHHHHHH
Confidence            99876  56899999999999999999999999876555444443322110       00    0013578899999999


Q ss_pred             hcCCCCCCCcc---HHHHhhccccc
Q 037274          222 CLAPDPAKRPA---AEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt---~~~~l~~~~f~  243 (245)
                      ||+.+|.+||+   +.++++||||.
T Consensus       253 ~l~~~P~~R~~~~~~~~ll~~~~~~  277 (305)
T cd05609         253 LLRQNPLERLGTGGAFEVKQHRFFL  277 (305)
T ss_pred             HhccChhhccCccCHHHHHhCcccc
Confidence            99999999998   78999999983

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.5e-36  Score=236.60  Aligned_cols=198  Identities=19%  Similarity=0.208  Sum_probs=154.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+.+|+.++++++||||+++++++..++..++||||+++|+|..++..                ....+++..+..+
T Consensus        59 ~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~----------------~~~~~~~~~~~~i  122 (274)
T cd05076          59 IALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK----------------EKGRVPVAWKITV  122 (274)
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh----------------cCCCCCHHHHHHH
Confidence            456788899999999999999999999999999999999999999666542                1345788889999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc---------------ccCccccccCCCCccccccccCceecCCCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI---------------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.|++.||+|||+.|++|+||||+||+++.               ||.+..........++..|+|||.+.+ ...++.+
T Consensus       123 ~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~-~~~~~~~  201 (274)
T cd05076         123 AQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPG-GNSLSTA  201 (274)
T ss_pred             HHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcC-CCCCCcH
Confidence            999999999999999999999999999864               333222222223345788999998865 2557899


Q ss_pred             hhHHHHHHHHHHHh-hCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFP-CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +|+||||+++|+++ +|..||........... .....     ..         +...++.+.+++.+||+.+|.+|||+
T Consensus       202 ~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~-----~~---------~~~~~~~~~~li~~cl~~~p~~Rps~  266 (274)
T cd05076         202 ADKWSFGTTLLEICFDGEVPLKERTPSEKERF-YEKKH-----RL---------PEPSCKELATLISQCLTYEPTQRPSF  266 (274)
T ss_pred             HHHHHHHHHHHHHHhCCCCCccccChHHHHHH-HHhcc-----CC---------CCCCChHHHHHHHHHcccChhhCcCH
Confidence            99999999999985 68999987554333221 11110     11         12345689999999999999999999


Q ss_pred             HHHhhc
Q 037274          234 EAQVLQ  239 (245)
Q Consensus       234 ~~~l~~  239 (245)
                      .+++++
T Consensus       267 ~~il~~  272 (274)
T cd05076         267 RTILRD  272 (274)
T ss_pred             HHHHHh
Confidence            999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=8e-37  Score=237.14  Aligned_cols=204  Identities=22%  Similarity=0.317  Sum_probs=159.4

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .+..+.+.+|++++++++||||+++++++..  .+..++++|++++++|.+++..                 ...+++..
T Consensus        45 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~-----------------~~~l~~~~  107 (266)
T cd06651          45 SKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKA-----------------YGALTESV  107 (266)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHH
Confidence            3456789999999999999999999998865  3568899999999999766642                 23478888


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------CCCccccccccCceecCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------SSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ++.++.|++.||+|||+.+++|+||+|+||+++.        ||++......       ....++..|+|||.+.+  ..
T Consensus       108 ~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~  185 (266)
T cd06651         108 TRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISG--EG  185 (266)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCC--CC
Confidence            8999999999999999999999999999999875        6655432211       12335788999999986  56


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      ++.++|+||||+++|++++|+.||................   ...         ..+...++.+.+++ .||..+|++|
T Consensus       186 ~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~---~~~---------~~~~~~~~~~~~li-~~~~~~p~~R  252 (266)
T cd06651         186 YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP---TNP---------QLPSHISEHARDFL-GCIFVEARHR  252 (266)
T ss_pred             CCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC---CCC---------CCchhcCHHHHHHH-HHhcCChhhC
Confidence            8899999999999999999999998754433332221111   000         11144678889998 5777899999


Q ss_pred             ccHHHHhhccccc
Q 037274          231 PAAEAQVLQEMWH  243 (245)
Q Consensus       231 pt~~~~l~~~~f~  243 (245)
                      |+++++++||||.
T Consensus       253 p~~~eil~hp~~~  265 (266)
T cd06651         253 PSAEELLRHPFAQ  265 (266)
T ss_pred             cCHHHHhcCcccc
Confidence            9999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=1.2e-36  Score=237.90  Aligned_cols=215  Identities=14%  Similarity=0.230  Sum_probs=165.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+++++.++|+||+++++++...+..++++||+++++|.+++..........  ..........+++..+
T Consensus        47 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~--~~~~~~~~~~l~~~~~  124 (280)
T cd05092          47 SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKIL--AGGEDVAPGQLTLGQM  124 (280)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhh--cccccCCccccCHHHH
Confidence            34566789999999999999999999999999999999999999999999887543221110  0001111245889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.|++|||+.|++|+||||+||+++.        ||.+......      ....+++.|+|||.+.+  ..++
T Consensus       125 ~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  202 (280)
T cd05092         125 LAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY--RKFT  202 (280)
T ss_pred             HHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc--CCcC
Confidence            999999999999999999999999999999976        6655432211      12223678999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|||||||++|+|++ |..||......+..........      .       ..+..+++.+.+++.+||+.||.+||
T Consensus       203 ~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~li~~cl~~~P~~Rp  269 (280)
T cd05092         203 TESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRE------L-------ERPRTCPPEVYAIMQGCWQREPQQRM  269 (280)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCcc------C-------CCCCCCCHHHHHHHHHHccCChhhCC
Confidence            99999999999999998 8999977665554444332210      0       11145788999999999999999999


Q ss_pred             cHHHHhh
Q 037274          232 AAEAQVL  238 (245)
Q Consensus       232 t~~~~l~  238 (245)
                      ++.+++.
T Consensus       270 ~~~~l~~  276 (280)
T cd05092         270 VIKDIHS  276 (280)
T ss_pred             CHHHHHH
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=3.5e-37  Score=246.35  Aligned_cols=209  Identities=14%  Similarity=0.189  Sum_probs=165.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+..|+.++..++|+||+++++.+.+++..++||||+++|+|.+++..                ....+++..+..+
T Consensus        44 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~----------------~~~~l~~~~~~~~  107 (332)
T cd05623          44 ETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSK----------------FEDRLPEDMARFY  107 (332)
T ss_pred             HHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHH----------------hcCCCCHHHHHHH
Confidence            345588899999999999999999999999999999999999999777642                1245788899999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----CCCccccccccCceecC---CCCCCCc
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----SSSSITTWAAAPEVVNF---GDDYYSC  153 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~---~~~~~~~  153 (245)
                      +.|++.||.|||+.|++||||||+||+++.        ||++......     ....||+.|+|||++.+   +...++.
T Consensus       108 ~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  187 (332)
T cd05623         108 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGP  187 (332)
T ss_pred             HHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCC
Confidence            999999999999999999999999999975        7766443221     12457999999999863   2345789


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC--Cc
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK--RP  231 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp  231 (245)
                      ++|||||||++|+|++|+.||...+.......+.....   ....+      .....+++++.+++++|+..++.+  |+
T Consensus       188 ~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~---~~~~p------~~~~~~s~~~~~li~~ll~~~~~r~~r~  258 (332)
T cd05623         188 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE---RFQFP------AQVTDVSEDAKDLIRRLICSREHRLGQN  258 (332)
T ss_pred             cCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc---cccCC------CccccCCHHHHHHHHHHccChhhhcCCC
Confidence            99999999999999999999998766565555443221   00111      111457899999999999765554  78


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      +++++++||||.
T Consensus       259 ~~~~~~~h~~f~  270 (332)
T cd05623         259 GIEDFKQHPFFT  270 (332)
T ss_pred             CHHHHhCCCCcC
Confidence            999999999985

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.5e-36  Score=238.05  Aligned_cols=215  Identities=25%  Similarity=0.386  Sum_probs=163.4

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+....+.+|++++++++||||+++++++...  +..++++||+++++|.+++...           .  .....+++.
T Consensus        39 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----------~--~~~~~l~~~  105 (287)
T cd06621          39 NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKV-----------K--KRGGRIGEK  105 (287)
T ss_pred             chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHH-----------H--hcCCCCCHH
Confidence            345677899999999999999999999988653  4689999999999998776421           1  123557888


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC--CCCccccccccCceecCCCCCCCch
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .+..++.|++.||+|||+.|++|+||+|+||+++.        ||.+......  ....++..|+|||.+.+  ..++.+
T Consensus       106 ~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~--~~~~~~  183 (287)
T cd06621         106 VLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQG--KPYSIT  183 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHHhcC--CCCCch
Confidence            99999999999999999999999999999999875        6654433221  12345788999999876  568899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCc-----hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQD-----LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      +|+||||+++|+|++|..||.....     .+...... ....   ....   ........+++.+.+++.+||..+|.+
T Consensus       184 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~---~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~  256 (287)
T cd06621         184 SDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV-NMPN---PELK---DEPGNGIKWSEEFKDFIKQCLEKDPTR  256 (287)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh-cCCc---hhhc---cCCCCCCchHHHHHHHHHHHcCCCccc
Confidence            9999999999999999999986521     12222211 1100   0000   000111345788999999999999999


Q ss_pred             CccHHHHhhccccc
Q 037274          230 RPAAEAQVLQEMWH  243 (245)
Q Consensus       230 Rpt~~~~l~~~~f~  243 (245)
                      |||+.+++.||||.
T Consensus       257 Rpt~~eil~~~~~~  270 (287)
T cd06621         257 RPTPWDMLEHPWIK  270 (287)
T ss_pred             CCCHHHHHhCcccc
Confidence            99999999999984

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-37  Score=239.14  Aligned_cols=211  Identities=25%  Similarity=0.420  Sum_probs=162.1

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      ....+.+.+|+.+++++ +|+||+++++++....      ..++++||+++++|.+++...             ...+..
T Consensus        43 ~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-------------~~~~~~  109 (275)
T cd06608          43 EDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGL-------------RKKGKR  109 (275)
T ss_pred             chhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHH-------------hhcCCC
Confidence            34557899999999999 6999999999987644      489999999999997776521             112356


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCC-
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFG-  147 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~-  147 (245)
                      +++..+..++.|++.||.|||+.|++|+||+|+||+++.        ||.+.....    .....+++.|+|||.+... 
T Consensus       110 ~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  189 (275)
T cd06608         110 LKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDE  189 (275)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccc
Confidence            889999999999999999999999999999999999976        544432211    1133457889999988642 


Q ss_pred             --CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCC
Q 037274          148 --DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP  225 (245)
Q Consensus       148 --~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  225 (245)
                        ...++.++||||||+++|++++|..||...........+.....         +  .......++.++.+++.+||..
T Consensus       190 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~~li~~~l~~  258 (275)
T cd06608         190 QPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP---------P--TLKSPENWSKKFNDFISECLIK  258 (275)
T ss_pred             cccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCC---------C--CCCchhhcCHHHHHHHHHHhhc
Confidence              23467899999999999999999999986544333333221110         0  1111244788999999999999


Q ss_pred             CCCCCccHHHHhhcccc
Q 037274          226 DPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       226 ~p~~Rpt~~~~l~~~~f  242 (245)
                      ||++|||+.++++|||.
T Consensus       259 dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         259 NYEQRPFMEELLEHPFI  275 (275)
T ss_pred             ChhhCcCHHHHhcCCCC
Confidence            99999999999999994

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=7.3e-37  Score=248.00  Aligned_cols=218  Identities=19%  Similarity=0.255  Sum_probs=162.9

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChh-------------------
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPA-------------------   67 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~-------------------   67 (245)
                      ....+.+.+|+++++.+ +||||+++++++...+..++||||+++|+|.+++.........                   
T Consensus        79 ~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (375)
T cd05104          79 LTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQR  158 (375)
T ss_pred             cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhh
Confidence            44567889999999999 8999999999999999999999999999999998643211000                   


Q ss_pred             -----hHHH----------------------------------HhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccc
Q 037274           68 -----ATQL----------------------------------IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHK  108 (245)
Q Consensus        68 -----~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~  108 (245)
                           ....                                  .........+++..+..++.||+.||+|||+.|++||
T Consensus       159 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~  238 (375)
T cd05104         159 EMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHR  238 (375)
T ss_pred             cccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence                 0000                                  0000112357888999999999999999999999999


Q ss_pred             cCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhh-CCCC
Q 037274          109 NISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC-GGLP  173 (245)
Q Consensus       109 dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~-g~~p  173 (245)
                      ||||+||+++.        ||++.......      ...++..|+|||.+.+  ..++.++||||||+++|+|++ |..|
T Consensus       239 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~sDi~slG~~l~ellt~g~~p  316 (375)
T cd05104         239 DLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFN--CVYTFESDVWSYGILLWEIFSLGSSP  316 (375)
T ss_pred             CCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcC--CCCCCCCCHHHHHHHHHHHHhcCCCC
Confidence            99999999875        77665432221      1122567999999987  568999999999999999997 8889


Q ss_pred             CCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      |.................     ...       .+...+.++.+++..||+.||++|||+.++++.
T Consensus       317 ~~~~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         317 YPGMPVDSKFYKMIKEGY-----RML-------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             CCCCCchHHHHHHHHhCc-----cCC-------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            977544433333222211     000       113457889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.1e-36  Score=237.04  Aligned_cols=208  Identities=23%  Similarity=0.312  Sum_probs=162.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++|+||+++++++...+..++|+||+++++|.+++..                 ...+++..+..+
T Consensus        51 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~~  113 (272)
T cd06629          51 MVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRT-----------------YGRFEEQLVRFF  113 (272)
T ss_pred             HHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhh-----------------ccCCCHHHHHHH
Confidence            356788999999999999999999999999999999999999999776652                 245788899999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCCchh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      +.|++.||.|||+.+++|+||+|+||+++.        ||.+......      ....++..|+|||.+......++.++
T Consensus       114 ~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~  193 (272)
T cd06629         114 TEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKV  193 (272)
T ss_pred             HHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccc
Confidence            999999999999999999999999999975        5554432211      12345788999999876333478999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||||++++++++|..||................   .....+     ......++..+.+++.+||.++|.+|||+++
T Consensus       194 Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  265 (272)
T cd06629         194 DIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKR---SAPPIP-----PDVSMNLSPVALDFLNACFTINPDNRPTARE  265 (272)
T ss_pred             hhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccc---cCCcCC-----ccccccCCHHHHHHHHHHhcCChhhCCCHHH
Confidence            99999999999999999997644433332221111   110111     1111456889999999999999999999999


Q ss_pred             Hhhcccc
Q 037274          236 QVLQEMW  242 (245)
Q Consensus       236 ~l~~~~f  242 (245)
                      +++|||+
T Consensus       266 il~~~~~  272 (272)
T cd06629         266 LLQHPFI  272 (272)
T ss_pred             HhhCCCC
Confidence            9999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=9.1e-37  Score=239.79  Aligned_cols=210  Identities=20%  Similarity=0.323  Sum_probs=161.9

Q ss_pred             HHHHHHHHHHHHhhC-CCCCeeeEEEEEEeC-----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           10 EYAKLAREIYRYKHL-SHPNIIPIYKTMISQ-----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ..+.+.+|+.+++++ +||||+++++++...     +..++|+||+++++|.++++..             ......+++
T Consensus        61 ~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~-------------~~~~~~~~~  127 (291)
T cd06639          61 VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGL-------------LICGQRLDE  127 (291)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHh-------------hhcCCCCCH
Confidence            456788999999999 799999999998653     3589999999999998777521             112346889


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCC---
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGD---  148 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~---  148 (245)
                      ..++.++.|++.||.+||+.|++|+||||+||+++.        ||.+......    ....++..|+|||.+..+.   
T Consensus       128 ~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  207 (291)
T cd06639         128 AMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYD  207 (291)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcc
Confidence            999999999999999999999999999999999975        5554432221    1334578899999986422   


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ..++.++|+|||||++|+|++|+.||...........+.....    ...       ..+...+..+.++|.+||+.+|+
T Consensus       208 ~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~l~~li~~~l~~~p~  276 (291)
T cd06639         208 YSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPP----PTL-------LHPEKWCRSFNHFISQCLIKDFE  276 (291)
T ss_pred             cccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCC----CCC-------CcccccCHHHHHHHHHHhhcChh
Confidence            2367899999999999999999999987654443333221111    000       11144677899999999999999


Q ss_pred             CCccHHHHhhccccc
Q 037274          229 KRPAAEAQVLQEMWH  243 (245)
Q Consensus       229 ~Rpt~~~~l~~~~f~  243 (245)
                      +||++.++++||||+
T Consensus       277 ~Rps~~~il~~~~~~  291 (291)
T cd06639         277 ARPSVTHLLEHPFIK  291 (291)
T ss_pred             hCcCHHHHhcCcccC
Confidence            999999999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=6.4e-37  Score=239.02  Aligned_cols=208  Identities=14%  Similarity=0.127  Sum_probs=163.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+..|+.++++++||||+++++.+...+..|+|+||+++++|.+++..               .....+++..+..
T Consensus        35 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------~~~~~~~~~~~~~   99 (277)
T cd05577          35 KGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYN---------------VGEPGFPEARAIF   99 (277)
T ss_pred             hhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHH---------------cCcCCCCHHHHHH
Confidence            3455678899999999999999999999999999999999999999666542               2234688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc---CCCCccccccccCceecCCCCCCCchhhH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI---SSSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.+.....   .....++..|+|||.+.+  ..++.++|+
T Consensus       100 ~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~Di  177 (277)
T cd05577         100 YAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQG--EVYDFSVDW  177 (277)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcC--CCCCchhhh
Confidence            9999999999999999999999999999976        554433221   112344778999999886  448899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----c
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----A  232 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t  232 (245)
                      ||||+++|++++|+.||...........+...... .         ....+...++.+.++|.+||+.+|.+||     +
T Consensus       178 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  247 (277)
T cd05577         178 FALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-M---------AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGS  247 (277)
T ss_pred             HHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-c---------cccCCccCCHHHHHHHHHHccCChhHccCCCccc
Confidence            99999999999999999775442222222211110 0         0111245689999999999999999999     8


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      +.++++||||.
T Consensus       248 ~~~ll~h~~~~  258 (277)
T cd05577         248 ADEVREHPLFK  258 (277)
T ss_pred             HHHHHhChhhh
Confidence            89999999983

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=7e-37  Score=237.53  Aligned_cols=189  Identities=16%  Similarity=0.193  Sum_probs=152.1

Q ss_pred             CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCC
Q 037274           25 SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEG  104 (245)
Q Consensus        25 ~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~  104 (245)
                      +|+||+++++.+..++..++||||+++++|.+++..                 ...+++..+..++.|++.||.+||+.|
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~~~~qi~~~l~~lH~~~  129 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKK-----------------EGKLSEAEVKKIIRQLVEALNDLHKHN  129 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            699999999999999999999999999999776642                 236889999999999999999999999


Q ss_pred             cccccCCCCceeccc---------ccCccccccCCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCC
Q 037274          105 LFHKNISAGHILHNI---------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVS  175 (245)
Q Consensus       105 ivH~dlkp~nil~~~---------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~  175 (245)
                      ++|+||+|+||+++.         ||.+..........++..|+|||.+.+  ..++.++|+||||+++|+|++|..||.
T Consensus       130 i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~~l~~g~~p~~  207 (267)
T PHA03390        130 IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKG--HNYDVSFDWWAVGVLTYELLTGKHPFK  207 (267)
T ss_pred             eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhhcC--CCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            999999999999875         555444444444567899999999986  568899999999999999999999998


Q ss_pred             CCCchHHH-HHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-HHHHhhccccc
Q 037274          176 RRQDLDIM-TKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-AEAQVLQEMWH  243 (245)
Q Consensus       176 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-~~~~l~~~~f~  243 (245)
                      ........ ........ .   ..       ......++.+.++|.+||+.+|.+||+ ++++++||||.
T Consensus       208 ~~~~~~~~~~~~~~~~~-~---~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        208 EDEDEELDLESLLKRQQ-K---KL-------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             CCCcchhhHHHHHHhhc-c---cC-------CcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            65433221 11111110 0   00       111468899999999999999999996 59999999995

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=2.9e-37  Score=243.22  Aligned_cols=204  Identities=21%  Similarity=0.345  Sum_probs=164.5

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.+++.++||||+++++.+..++..++++||+++++|.+++.                  ...+++..++.
T Consensus        60 ~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~------------------~~~~~~~~~~~  121 (297)
T cd06659          60 QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS------------------QTRLNEEQIAT  121 (297)
T ss_pred             chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHh------------------hcCCCHHHHHH
Confidence            345678899999999999999999999999999999999999999966553                  24578899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||++.....    .....+++.|+|||.+.+  ..++.++|
T Consensus       122 ~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  199 (297)
T cd06659         122 VCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISR--TPYGTEVD  199 (297)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHcc--CCCCchhh
Confidence            9999999999999999999999999999975        555432221    112345889999999976  56889999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      +||||+++|+|++|..||...........+....         .  .........+..+.+++++||+.+|.+||+++++
T Consensus       200 v~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~l  268 (297)
T cd06659         200 IWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP---------P--PKLKNAHKISPVLRDFLERMLTREPQERATAQEL  268 (297)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccC---------C--CCccccCCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence            9999999999999999998765544443322111         0  0011124577899999999999999999999999


Q ss_pred             hhccccc
Q 037274          237 VLQEMWH  243 (245)
Q Consensus       237 l~~~~f~  243 (245)
                      ++||||.
T Consensus       269 l~~~~~~  275 (297)
T cd06659         269 LDHPFLL  275 (297)
T ss_pred             hhChhhc
Confidence            9999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.7e-36  Score=236.58  Aligned_cols=210  Identities=12%  Similarity=0.208  Sum_probs=161.4

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .....++.+|+.+++.++|+||+++++++...+..++++||+++++|.+++.......       .........++..+.
T Consensus        50 ~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~-------~~~~~~~~~~~~~~~  122 (277)
T cd05062          50 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM-------ENNPVQAPPSLKKMI  122 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccc-------cccccccCCCHHHHH
Confidence            3456678999999999999999999999988889999999999999988886321100       000112346778889


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ...+++.|+|||.+.+  ..++.
T Consensus       123 ~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  200 (277)
T cd05062         123 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD--GVFTT  200 (277)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc--CCcCc
Confidence            99999999999999999999999999999986        66554332211      1233678999999986  56899


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++|+||||+++|+|++ |..||.................       .      ..+...+..+.+++.+||+.+|.+|||
T Consensus       201 ~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~li~~~l~~~p~~Rps  267 (277)
T cd05062         201 YSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL-------L------DKPDNCPDMLFELMRMCWQYNPKMRPS  267 (277)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-------C------CCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            9999999999999998 6889887655444433322210       0      011456788999999999999999999


Q ss_pred             HHHHhhc
Q 037274          233 AEAQVLQ  239 (245)
Q Consensus       233 ~~~~l~~  239 (245)
                      +.+++++
T Consensus       268 ~~e~l~~  274 (277)
T cd05062         268 FLEIISS  274 (277)
T ss_pred             HHHHHHH
Confidence            9999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.7e-36  Score=246.83  Aligned_cols=218  Identities=19%  Similarity=0.287  Sum_probs=164.2

Q ss_pred             cHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCC---------------------
Q 037274            7 QAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLN---------------------   64 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~---------------------   64 (245)
                      .....+.+.+|+++++++. ||||+++++++...+..++||||+++|+|.+++......                     
T Consensus        80 ~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
T cd05105          80 RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPA  159 (400)
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcc
Confidence            3455678999999999996 999999999999999999999999999999988643110                     


Q ss_pred             ----------------------------------------------------------ChhhHHHHhhhccCCCCcHHHH
Q 037274           65 ----------------------------------------------------------SPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus        65 ----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                                                                                ................+++..+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~  239 (400)
T cd05105         160 DESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDL  239 (400)
T ss_pred             cccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHH
Confidence                                                                      0001111222222345888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||.|||+.+++|+||||+||+++.        ||++.......      ...+++.|+|||.+.+  ..++
T Consensus       240 ~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  317 (400)
T cd05105         240 LSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD--NLYT  317 (400)
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC--CCCC
Confidence            999999999999999999999999999999876        77665432211      1234678999999986  5689


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|+|++ |..||................   .  ...       ....++.++.+++.+||+.||++||
T Consensus       318 ~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~---~--~~~-------~~~~~~~~l~~li~~cl~~dP~~RP  385 (400)
T cd05105         318 TLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSG---Y--RMA-------KPDHATQEVYDIMVKCWNSEPEKRP  385 (400)
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcC---C--CCC-------CCccCCHHHHHHHHHHCccCHhHCc
Confidence            99999999999999997 889998754433332222211   0  000       1145788999999999999999999


Q ss_pred             cHHHHhh
Q 037274          232 AAEAQVL  238 (245)
Q Consensus       232 t~~~~l~  238 (245)
                      ++.++.+
T Consensus       386 t~~~l~~  392 (400)
T cd05105         386 SFLHLSD  392 (400)
T ss_pred             CHHHHHH
Confidence            9998865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.2e-36  Score=235.59  Aligned_cols=201  Identities=17%  Similarity=0.310  Sum_probs=161.6

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.++++++|+||+++++.+...+..++++|++++++|.+++..               .....+++..+.
T Consensus        42 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------~~~~~~~~~~~~  106 (261)
T cd05072          42 TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKS---------------DEGGKVLLPKLI  106 (261)
T ss_pred             chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHH---------------hcCCCCCHHHHH
Confidence            44567899999999999999999999999988999999999999999776652               123457888899


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|++.||+|||+.+++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+  ..++.+
T Consensus       107 ~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  184 (261)
T cd05072         107 DFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF--GSFTIK  184 (261)
T ss_pred             HHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhcc--CCCChh
Confidence            99999999999999999999999999999986        66654433211     1223567999999986  558899


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +|+||||+++|+|++ |..||...........+....      ..+       ....++.++.+++.+|+..+|++||++
T Consensus       185 ~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~  251 (261)
T cd05072         185 SDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY------RMP-------RMENCPDELYDIMKTCWKEKAEERPTF  251 (261)
T ss_pred             hhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC------CCC-------CCCCCCHHHHHHHHHHccCCcccCcCH
Confidence            999999999999998 999998766555544443221      111       114577899999999999999999999


Q ss_pred             HHHhh
Q 037274          234 EAQVL  238 (245)
Q Consensus       234 ~~~l~  238 (245)
                      +++++
T Consensus       252 ~~i~~  256 (261)
T cd05072         252 DYLQS  256 (261)
T ss_pred             HHHHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=4.1e-37  Score=238.53  Aligned_cols=211  Identities=24%  Similarity=0.356  Sum_probs=164.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+++.+|+++++.++||||+++++.+..++..++++|++++++|.+++...                ...+++..+
T Consensus        39 ~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~  102 (265)
T cd06605          39 NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEV----------------QGRIPERIL  102 (265)
T ss_pred             ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHc----------------cCCCCHHHH
Confidence            3466778999999999999999999999999999999999999999997777531                156788999


Q ss_pred             HHHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCccccccC--CCCccccccccCceecCCCCCCCchh
Q 037274           87 AIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ..++.|++.||+|||+ .|++|+||+|+||+++.        ||.+......  ....++..|+|||.+.+  ..++.++
T Consensus       103 ~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~  180 (265)
T cd06605         103 GKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQG--NDYSVKS  180 (265)
T ss_pred             HHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcC--CCCCchh
Confidence            9999999999999999 99999999999999986        4443322111  12456789999999987  5789999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      |+||||++++++++|..||..... ...............     .+.   .....++.++.++|..||..+|.+|||+.
T Consensus       181 Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  252 (265)
T cd06605         181 DIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-----PPR---LPSGKFSPDFQDFVNLCLIKDPRERPSYK  252 (265)
T ss_pred             hHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-----CCC---CChhhcCHHHHHHHHHHcCCCchhCcCHH
Confidence            999999999999999999976421 111111111111110     000   00122788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      +++.||||.
T Consensus       253 ~ll~~~~~~  261 (265)
T cd06605         253 ELLEHPFIK  261 (265)
T ss_pred             HHhhCchhh
Confidence            999999995

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-37  Score=265.50  Aligned_cols=210  Identities=18%  Similarity=0.303  Sum_probs=178.2

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+.+...+|.+|..+|++++|||||+++|.+.+....++++|||++|+|..+++....          ...+...++..
T Consensus       733 ~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~----------~~~~~~~L~~~  802 (1025)
T KOG1095|consen  733 LSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRP----------APFQPSNLSMR  802 (1025)
T ss_pred             cCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhccc----------ccCCCCCCCHH
Confidence            34588999999999999999999999999999999999999999999999999874321          12224668899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCC------ccccccccCceecCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSS------SITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~------~~~~~y~aPE~~~~~~~~  150 (245)
                      .+..++.||++|+.||+++++|||||.++|+|++.        ||+++........      .....|||||.+..  ..
T Consensus       803 dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d--~i  880 (1025)
T KOG1095|consen  803 DLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD--GI  880 (1025)
T ss_pred             HHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhh--cc
Confidence            99999999999999999999999999999999986        9998844333321      11578999999997  66


Q ss_pred             CCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      ++.++|||||||++||+++ |..||...++.+.+.......      +.+++       ..+++.+.+++..||+.+|++
T Consensus       881 FtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg------RL~~P-------~~CP~~ly~lM~~CW~~~pe~  947 (1025)
T KOG1095|consen  881 FTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG------RLDPP-------SYCPEKLYQLMLQCWKHDPED  947 (1025)
T ss_pred             cccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC------ccCCC-------CCCChHHHHHHHHHccCChhh
Confidence            9999999999999999998 889999988888877655544      33333       678999999999999999999


Q ss_pred             CccHHHHhhc
Q 037274          230 RPAAEAQVLQ  239 (245)
Q Consensus       230 Rpt~~~~l~~  239 (245)
                      ||++..+++.
T Consensus       948 RP~F~~i~~q  957 (1025)
T KOG1095|consen  948 RPSFRTIVEQ  957 (1025)
T ss_pred             CccHHHHHhh
Confidence            9999998864

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=9.9e-37  Score=235.17  Aligned_cols=204  Identities=16%  Similarity=0.218  Sum_probs=163.7

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ......+.+.+|+.+++.++|+||+++++.+..++..++++||+++++|.+++..               .....+++..
T Consensus        37 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---------------~~~~~~~~~~  101 (255)
T cd08219          37 KSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKL---------------QRGKLFPEDT  101 (255)
T ss_pred             cchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHh---------------ccCCCCCHHH
Confidence            4455678899999999999999999999999999999999999999999665542               2234578899


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCc
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +..++.|++.||.+||++|++|+||+|+||+++.        ||.+.......    ...+++.|+|||.+.+  ..++.
T Consensus       102 ~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~  179 (255)
T cd08219         102 ILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWEN--MPYNN  179 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHcc--CCcCc
Confidence            9999999999999999999999999999999975        66554332211    2346788999999876  56889


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++|+||||+++|+|++|..||...+.......+.....      .       ..+..++..+.+++.+||+.||.+||++
T Consensus       180 ~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~li~~~l~~~P~~Rp~~  246 (255)
T cd08219         180 KSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY------K-------PLPSHYSYELRSLIKQMFKRNPRSRPSA  246 (255)
T ss_pred             hhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCC------C-------CCCcccCHHHHHHHHHHHhCCcccCCCH
Confidence            99999999999999999999987554444333322110      0       0114567889999999999999999999


Q ss_pred             HHHhhc
Q 037274          234 EAQVLQ  239 (245)
Q Consensus       234 ~~~l~~  239 (245)
                      .+++..
T Consensus       247 ~~il~~  252 (255)
T cd08219         247 TTILSR  252 (255)
T ss_pred             HHHhhc
Confidence            999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=7.7e-37  Score=237.31  Aligned_cols=207  Identities=28%  Similarity=0.419  Sum_probs=160.5

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++||||+++++++..++..++|+||+++++|.+++..                 ...+++..+..
T Consensus        48 ~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~  110 (267)
T cd06646          48 DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV-----------------TGPLSELQIAY  110 (267)
T ss_pred             chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh-----------------cCCCCHHHHHH
Confidence            3456788999999999999999999999999999999999999999776642                 24578889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecC-CCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNF-GDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~-~~~~~~~~~  155 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.. ....++.++
T Consensus       111 ~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~  190 (267)
T cd06646         111 VCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLC  190 (267)
T ss_pred             HHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchh
Confidence            9999999999999999999999999999976        6555433211    12345789999998853 124467899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||||+++|+|++|..||............   ...    ....+  .......++..+.+++++||..+|++|||+++
T Consensus       191 Dvws~G~il~el~~g~~p~~~~~~~~~~~~~---~~~----~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~  261 (267)
T cd06646         191 DIWAVGITAIELAELQPPMFDLHPMRALFLM---SKS----NFQPP--KLKDKTKWSSTFHNFVKISLTKNPKKRPTAER  261 (267)
T ss_pred             hHHHHHHHHHHHHhCCCCccccchhhhheee---ecC----CCCCC--CCccccccCHHHHHHHHHHhhCChhhCcCHHH
Confidence            9999999999999999999764332221111   100    00001  01112457889999999999999999999999


Q ss_pred             Hhhccc
Q 037274          236 QVLQEM  241 (245)
Q Consensus       236 ~l~~~~  241 (245)
                      +++|+|
T Consensus       262 il~~l~  267 (267)
T cd06646         262 LLTHLF  267 (267)
T ss_pred             HhcCCC
Confidence            999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-38  Score=235.60  Aligned_cols=214  Identities=16%  Similarity=0.221  Sum_probs=166.4

Q ss_pred             cHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .......+.+|++++.+.+ |+||+.++++|+++..+|+|||.+.||+|-+.|..                 ...+++.+
T Consensus       115 ~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~-----------------~~~F~E~E  177 (463)
T KOG0607|consen  115 PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQK-----------------RKHFNERE  177 (463)
T ss_pred             CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHH-----------------hhhccHHH
Confidence            3456788999999999996 99999999999999999999999999999666652                 46799999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCcccccc-----------CCCCccccccccCce
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWI-----------SSSSSITTWAAAPEV  143 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~-----------~~~~~~~~~y~aPE~  143 (245)
                      ...+..+|+.||.|||++||.||||||+|||...           |.++.....           ..+.+|+..|||||+
T Consensus       178 As~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEV  257 (463)
T KOG0607|consen  178 ASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEV  257 (463)
T ss_pred             HHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhH
Confidence            9999999999999999999999999999999765           333221111           113455778999998


Q ss_pred             ecC---CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCc-----------hHHHHHHHhcCCCCccCCCCCCCCCCCCcc
Q 037274          144 VNF---GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQD-----------LDIMTKMLMKQPKSTSLQVAPNEDTTHGTR  209 (245)
Q Consensus       144 ~~~---~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (245)
                      ..-   ....|+.++|.||||+++|-|++|.+||.+.=.           ..=.+.++..+..+ ..+.++     ....
T Consensus       258 Vd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEG-kYeFPd-----kdWa  331 (463)
T KOG0607|consen  258 VDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG-KYEFPD-----KDWA  331 (463)
T ss_pred             HhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhcc-CCcCCh-----hhhH
Confidence            753   234578999999999999999999999965211           11122333333211 112222     2226


Q ss_pred             cccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          210 TLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       210 ~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+|.+..++++.++..|+.+|.++.++++|||++
T Consensus       332 hIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~  365 (463)
T KOG0607|consen  332 HISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQ  365 (463)
T ss_pred             HhhHHHHHHHHHHHhccHHhhhhhhhccCCcccc
Confidence            7899999999999999999999999999999985

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3e-36  Score=232.09  Aligned_cols=201  Identities=19%  Similarity=0.296  Sum_probs=158.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+....+.+|++++++++||||+++++++...+..++|+||+++++|.+++..                ....+++..+
T Consensus        33 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~   96 (252)
T cd05084          33 PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT----------------EGPRLKVKEL   96 (252)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHh----------------CCCCCCHHHH
Confidence            355677899999999999999999999999999999999999999999776642                1245788999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +.++.|++.||.|||++|++|+||+|+||+++.        ||.+.......      ....+..|+|||.+.+  ..++
T Consensus        97 ~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  174 (252)
T cd05084          97 IQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNY--GRYS  174 (252)
T ss_pred             HHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcC--CCCC
Confidence            999999999999999999999999999999986        55544322111      1111356999999987  5588


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|+||||+++|++++ |..||................      ..       ..+...+..+.+++.+||+.+|++||
T Consensus       175 ~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp  241 (252)
T cd05084         175 SESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV------RL-------PCPELCPDAVYRLMERCWEYDPGQRP  241 (252)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC------CC-------CCcccCCHHHHHHHHHHcCCChhhCc
Confidence            99999999999999997 888987655544333332211      00       11145688999999999999999999


Q ss_pred             cHHHHhh
Q 037274          232 AAEAQVL  238 (245)
Q Consensus       232 t~~~~l~  238 (245)
                      |+.++++
T Consensus       242 s~~~~~~  248 (252)
T cd05084         242 SFSTVHQ  248 (252)
T ss_pred             CHHHHHH
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-37  Score=246.12  Aligned_cols=211  Identities=18%  Similarity=0.219  Sum_probs=161.6

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCc-eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQR-QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+|.+|+.++.+++|||+|+++|+|.+.+ ..++|+||+++|+|.+.+....               ...++|.....|
T Consensus       115 ~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~---------------~~~L~W~~R~kI  179 (361)
T KOG1187|consen  115 EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKK---------------GEPLDWETRLKI  179 (361)
T ss_pred             hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCC---------------CCCCCHHHHHHH
Confidence            566999999999999999999999999888 5999999999999977775311               117899999999


Q ss_pred             HHHHHHHHHHHHhCC---cccccCCCCceeccc--------ccCcccccc-CCC---C-ccccccccCceecCCCCCCCc
Q 037274           90 HKETLKGLSYLQGEG---LFHKNISAGHILHNI--------FNDDTRNWI-SSS---S-SITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~---ivH~dlkp~nil~~~--------f~~~~~~~~-~~~---~-~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +.+++.||+|||...   |+||||||+|||++.        ||+++.... ...   . .||.+|+|||+...  ...+.
T Consensus       180 a~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~--g~lt~  257 (361)
T KOG1187|consen  180 ALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAST--GKLTE  257 (361)
T ss_pred             HHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhcc--CCcCc
Confidence            999999999999964   999999999999995        998866543 221   1 78999999999987  55899


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCC---chHHHHHHHhcCCCCccCCCCCCCCC-CCCcc-cccHHHHHHHHHhcCCCCC
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQ---DLDIMTKMLMKQPKSTSLQVAPNEDT-THGTR-TLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~li~~~l~~~p~  228 (245)
                      ++||||||++++|+++|+.+.+...   ......+............+.++... ..... .....+..+...|++.+|.
T Consensus       258 KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~  337 (361)
T KOG1187|consen  258 KSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPK  337 (361)
T ss_pred             ccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCC
Confidence            9999999999999999998887532   22223322222222222233333322 11111 2344577888899999999


Q ss_pred             CCccHHHHhh
Q 037274          229 KRPAAEAQVL  238 (245)
Q Consensus       229 ~Rpt~~~~l~  238 (245)
                      +||++.+++.
T Consensus       338 ~RP~m~~Vv~  347 (361)
T KOG1187|consen  338 ERPTMSQVVK  347 (361)
T ss_pred             cCcCHHHHHH
Confidence            9999999754

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=7.5e-37  Score=236.00  Aligned_cols=204  Identities=17%  Similarity=0.252  Sum_probs=163.3

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++|+||+++++.+...+..++++||+++++|.+++..               .....+++..+..
T Consensus        41 ~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---------------~~~~~~~~~~~~~  105 (257)
T cd08225          41 KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINR---------------QRGVLFSEDQILS  105 (257)
T ss_pred             hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHh---------------ccCCCCCHHHHHH
Confidence            3556788999999999999999999999999999999999999999776642               1234578899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccCC----CCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.||.|||+.+++|+||+|+||+++.         ||.+.......    ...+++.|+|||....  ..++.++
T Consensus       106 ~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~  183 (257)
T cd08225         106 WFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQN--RPYNNKT  183 (257)
T ss_pred             HHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcC--CCCCchh
Confidence            9999999999999999999999999999975         33333222111    2245788999999876  5588999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||||++++++++|..||...+.............       .      ......+.++.+++.+||..+|++|||+.+
T Consensus       184 Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~  250 (257)
T cd08225         184 DIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF-------A------PISPNFSRDLRSLISQLFKVSPRDRPSITS  250 (257)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC-------C------CCCCCCCHHHHHHHHHHhccChhhCcCHHH
Confidence            999999999999999999987554443333221110       0      011456789999999999999999999999


Q ss_pred             Hhhcccc
Q 037274          236 QVLQEMW  242 (245)
Q Consensus       236 ~l~~~~f  242 (245)
                      +++||||
T Consensus       251 ll~~~~~  257 (257)
T cd08225         251 ILKRPFL  257 (257)
T ss_pred             HhhCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=2.1e-36  Score=238.34  Aligned_cols=217  Identities=18%  Similarity=0.305  Sum_probs=163.6

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .....+.+.+|+.+++++ +||||+++++++...+..++++||+++++|.+++........... ..........+++..
T Consensus        42 ~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~  120 (297)
T cd05089          42 SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPA-FAKEHGTASTLTSQQ  120 (297)
T ss_pred             CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccc-cccccCccCCCCHHH
Confidence            345567899999999999 799999999999998999999999999999988864322111000 000111224588999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +..++.|++.||+|||+.|++|+||||+||+++.        ||++......   .....+..|+|||.+.+  ..++.+
T Consensus       121 ~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  198 (297)
T cd05089         121 LLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNY--SVYTTK  198 (297)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhcc--CCCCch
Confidence            9999999999999999999999999999999965        6665432211   11122456999999876  568899


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +|||||||++|+|++ |..||................      ..       ..+..++..+.+++.+||+.+|.+||++
T Consensus       199 ~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~  265 (297)
T cd05089         199 SDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY------RM-------EKPRNCDDEVYELMRQCWRDRPYERPPF  265 (297)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC------CC-------CCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            999999999999997 999998766555444332211      00       1114578899999999999999999999


Q ss_pred             HHHhhc
Q 037274          234 EAQVLQ  239 (245)
Q Consensus       234 ~~~l~~  239 (245)
                      +++++.
T Consensus       266 ~~i~~~  271 (297)
T cd05089         266 AQISVQ  271 (297)
T ss_pred             HHHHHH
Confidence            998654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=2e-36  Score=236.28  Aligned_cols=204  Identities=24%  Similarity=0.340  Sum_probs=164.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++..++..++|+||+++++|.+++.                  ...+++..+
T Consensus        42 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~------------------~~~~~~~~~  103 (277)
T cd06641          42 AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------------------PGPLDETQI  103 (277)
T ss_pred             chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHh------------------cCCCCHHHH
Confidence            34566789999999999999999999999999999999999999999976664                  235788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.|+.+||+.|++|+||+|+||+++.        ||.+.......    ...++..|+|||.+.+  ..++.+
T Consensus       104 ~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~  181 (277)
T cd06641         104 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ--SAYDSK  181 (277)
T ss_pred             HHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhcc--CCCCch
Confidence            999999999999999999999999999999876        55543322211    2345788999999876  557889


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|+||||+++|++++|..||...........+....       .      ......++.++.+++.+||+.+|.+||++.
T Consensus       182 ~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  248 (277)
T cd06641         182 ADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN-------P------PTLEGNYSKPLKEFVEACLNKEPSFRPTAK  248 (277)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC-------C------CCCCcccCHHHHHHHHHHccCChhhCcCHH
Confidence            999999999999999999998755433332221111       0      011145788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       249 ~~l~~~~~~  257 (277)
T cd06641         249 ELLKHKFIV  257 (277)
T ss_pred             HHHhCHHHh
Confidence            999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=2.1e-36  Score=234.65  Aligned_cols=204  Identities=23%  Similarity=0.312  Sum_probs=160.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .+..+.+.+|+++++++.|+||+++++++.+.  ...++++|++++++|.+++..                 ...+++..
T Consensus        45 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-----------------~~~~~~~~  107 (265)
T cd06652          45 SKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS-----------------YGALTENV  107 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHH-----------------cCCCCHHH
Confidence            34567899999999999999999999988663  458899999999999766642                 23467888


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-------CCCCccccccccCceecCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-------SSSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      +..++.|++.||.|||+.|++|+||+|+||+++.        ||.+.....       .....++..|+|||.+.+  ..
T Consensus       108 ~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~  185 (265)
T cd06652         108 TRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISG--EG  185 (265)
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcC--CC
Confidence            8999999999999999999999999999999976        665543221       112345788999999876  56


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      ++.++|+||||+++|++++|+.||................   ..         ...+...+..+.+++++|+. +|++|
T Consensus       186 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~---------~~~~~~~~~~~~~~i~~~l~-~p~~R  252 (265)
T cd06652         186 YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP---TN---------PVLPPHVSDHCRDFLKRIFV-EAKLR  252 (265)
T ss_pred             CCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCC---CC---------CCCchhhCHHHHHHHHHHhc-ChhhC
Confidence            8899999999999999999999998754333332221111   00         01124567889999999995 89999


Q ss_pred             ccHHHHhhccccc
Q 037274          231 PAAEAQVLQEMWH  243 (245)
Q Consensus       231 pt~~~~l~~~~f~  243 (245)
                      |+++++++|||++
T Consensus       253 p~~~~il~~~~~~  265 (265)
T cd06652         253 PSADELLRHTFVH  265 (265)
T ss_pred             CCHHHHhcCcccC
Confidence            9999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-36  Score=237.42  Aligned_cols=206  Identities=26%  Similarity=0.384  Sum_probs=163.2

Q ss_pred             cHHHHHHHHHHHHHHhhCC---CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            7 QAEEYAKLAREIYRYKHLS---HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~---h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      .....+.+.+|+.++++++   |||++++++++..++..++++||+++++|.+++.                  ...+++
T Consensus        39 ~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~------------------~~~l~~  100 (277)
T cd06917          39 PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMK------------------AGPIAE  100 (277)
T ss_pred             CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHH------------------ccCCCH
Confidence            4556778999999999996   9999999999999999999999999999976654                  135788


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ..+..++.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....++..|+|||.+.. ...+
T Consensus       101 ~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~  179 (277)
T cd06917         101 KYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITE-GKYY  179 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhcc-CCcc
Confidence            999999999999999999999999999999999986        5554433222    12345788999999864 2456


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|+||||+++|+|++|..||..............    .     ..+   .......+.++.+++.+||+.||.+||
T Consensus       180 ~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~----~-----~~~---~~~~~~~~~~~~~~i~~~l~~~p~~R~  247 (277)
T cd06917         180 DTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK----S-----KPP---RLEDNGYSKLLREFVAACLDEEPKERL  247 (277)
T ss_pred             ccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc----C-----CCC---CCCcccCCHHHHHHHHHHcCCCcccCc
Confidence            8899999999999999999999987443222211100    0     001   011123778999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      ++.+++.|+||+
T Consensus       248 ~~~~il~~~~~~  259 (277)
T cd06917         248 SAEELLKSKWIK  259 (277)
T ss_pred             CHHHHhhChHhh
Confidence            999999999985

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.8e-36  Score=234.14  Aligned_cols=199  Identities=18%  Similarity=0.206  Sum_probs=155.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.+++.++||||+++++++..++..++||||+++|+|.+++...                +..+++..+..
T Consensus        41 ~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------------~~~~~~~~~~~  104 (258)
T cd05078          41 NYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKN----------------KNLINISWKLE  104 (258)
T ss_pred             HHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcC----------------CCCCCHHHHHH
Confidence            34567889999999999999999999999988999999999999997777531                23578888999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc----------------ccCccccccCCCCccccccccCceecCCCCCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI----------------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ++.|++.||+|||+.|++|+||||+||+++.                ||.+..........+++.|+|||.+.+ ...++
T Consensus       105 ~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~  183 (258)
T cd05078         105 VAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPECIEN-PQNLS  183 (258)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchhccC-CCCCC
Confidence            9999999999999999999999999999954                444433333334456888999999875 23478


Q ss_pred             chhhHHHHHHHHHHHhhCC-CCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPCGG-LPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|+||||+++|++++|. .||.......... .....     ..         .+...+.++.+++.+||+.+|++||
T Consensus       184 ~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~-----~~---------~~~~~~~~~~~li~~~l~~~p~~Rp  248 (258)
T cd05078         184 LAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYEDR-----HQ---------LPAPKWTELANLINQCMDYEPDFRP  248 (258)
T ss_pred             chhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHcc-----cc---------CCCCCcHHHHHHHHHHhccChhhCC
Confidence            8999999999999999985 5655533332221 11110     01         1134567899999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |++++++.
T Consensus       249 s~~~il~~  256 (258)
T cd05078         249 SFRAIIRD  256 (258)
T ss_pred             CHHHHHHh
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=3.5e-36  Score=237.58  Aligned_cols=203  Identities=21%  Similarity=0.316  Sum_probs=161.4

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .....+.+.+|+.+++++ +|+||+++++++...+..++++||+.+|+|.+++..               .....+++..
T Consensus        78 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~---------------~~~~~l~~~~  142 (302)
T cd05055          78 HSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRR---------------KRESFLTLED  142 (302)
T ss_pred             ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHh---------------CCCCCCCHHH
Confidence            345567899999999999 799999999999999999999999999999776642               1123478999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..++.|++.||.|||+++++|+||||+||+++.        ||.+.......      ...++..|+|||.+.+  ..+
T Consensus       143 ~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  220 (302)
T cd05055         143 LLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN--CVY  220 (302)
T ss_pred             HHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhcc--CCC
Confidence            9999999999999999999999999999999975        66554332221      1223678999999987  558


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|++++ |..||......+..........     ...       .+...++++.+++.+||+.+|++|
T Consensus       221 ~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~~~~li~~cl~~~p~~R  288 (302)
T cd05055         221 TFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY-----RMA-------QPEHAPAEIYDIMKTCWDADPLKR  288 (302)
T ss_pred             CcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCC-----cCC-------CCCCCCHHHHHHHHHHcCCCchhC
Confidence            899999999999999998 9999987665544433332211     000       113467899999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      ||+.++++
T Consensus       289 pt~~ell~  296 (302)
T cd05055         289 PTFKQIVQ  296 (302)
T ss_pred             cCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-36  Score=235.16  Aligned_cols=203  Identities=18%  Similarity=0.174  Sum_probs=161.0

Q ss_pred             HHHHHHHHH-HhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           12 AKLAREIYR-YKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        12 ~~~~~E~~~-l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ..+..|..+ ...++|+||+++++++..++..++++||+++++|.+++..                 ...+++..+..++
T Consensus        41 ~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~i~  103 (260)
T cd05611          41 TNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKT-----------------LGGLPEDWAKQYI  103 (260)
T ss_pred             HHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHH-----------------cCCCCHHHHHHHH
Confidence            344555544 3455899999999999999999999999999999777642                 2457889999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCccccccccCceecCCCCCCCchhhHHHHHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGI  162 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~  162 (245)
                      .|++.||.|||+.+++|+||+|+||+++.        ||.+..........+++.|+|||.+.+  ..++.++|+||||+
T Consensus       104 ~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~  181 (260)
T cd05611         104 AEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILG--VGDDKMSDWWSLGC  181 (260)
T ss_pred             HHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccChhhhcC--CCCcchhhhHHHHH
Confidence            99999999999999999999999999875        665554443444566889999999986  44889999999999


Q ss_pred             HHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---cHHHHhhc
Q 037274          163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---AAEAQVLQ  239 (245)
Q Consensus       163 ~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~~l~~  239 (245)
                      ++|++++|..||...+..............          ........+++.+.+++.+||+.+|++||   ++++++.|
T Consensus       182 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         182 VIFEFLFGYPPFHAETPDAVFDNILSRRIN----------WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcccC----------CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence            999999999999876665544443322110          00111135789999999999999999999   45799999


Q ss_pred             cccc
Q 037274          240 EMWH  243 (245)
Q Consensus       240 ~~f~  243 (245)
                      |||.
T Consensus       252 ~~~~  255 (260)
T cd05611         252 PFFK  255 (260)
T ss_pred             hHhh
Confidence            9985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.7e-36  Score=238.55  Aligned_cols=214  Identities=21%  Similarity=0.286  Sum_probs=162.5

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+|+.++++++||||+++++++..+  +..++++||+++ +|.+++..                ....+++..+..
T Consensus        48 ~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~----------------~~~~l~~~~~~~  110 (293)
T cd07843          48 PITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMET----------------MKQPFLQSEVKC  110 (293)
T ss_pred             hhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHh----------------ccCCCCHHHHHH
Confidence            34567899999999999999999998877  789999999985 88666542                123588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.++|
T Consensus       111 i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~~D  189 (293)
T cd07843         111 LMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLG-AKEYSTAID  189 (293)
T ss_pred             HHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcC-Cccccchhh
Confidence            9999999999999999999999999999986        5554433322    12334788999999875 334688999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc----------------CCCCC-CCCCCCCccc-ccHHHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS----------------LQVAP-NEDTTHGTRT-LSKNFWNM  218 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~-~~~~~~~~~~-~~~~~~~l  218 (245)
                      +||||+++|+|++|..||...........+.........                ..... .......+.. .++.+.++
T Consensus       190 i~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  269 (293)
T cd07843         190 MWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDL  269 (293)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHH
Confidence            999999999999999999887666555544332211000                00000 0000111122 58889999


Q ss_pred             HHHhcCCCCCCCccHHHHhhcccc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      |.+||+.+|++|||+.+++.||||
T Consensus       270 i~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         270 LNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             HHHHhccCccccCCHHHHhcCCCC
Confidence            999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=1.2e-36  Score=239.79  Aligned_cols=216  Identities=19%  Similarity=0.232  Sum_probs=164.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+..|+.++++++|+||+++++++.+++..++|+||+ +++|.+++...                ...+++..+..+
T Consensus        45 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~----------------~~~~~~~~~~~~  107 (298)
T cd07841          45 INFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDK----------------SIVLTPADIKSY  107 (298)
T ss_pred             hhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhcc----------------CCCCCHHHHHHH
Confidence            4456788999999999999999999999999999999999 88997776521                125889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.||++||.|||++|++|+||+|+||+++.        ||.+.......    ...+++.|+|||.+.+ ...++.++|+
T Consensus       108 ~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv  186 (298)
T cd07841         108 MLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFG-ARHYGVGVDM  186 (298)
T ss_pred             HHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhC-CCCCCcHHHH
Confidence            999999999999999999999999999986        55444332221    2234678999998854 3457899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC--------------CCCCCCCCCCCcccccHHHHHHHHHhc
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL--------------QVAPNEDTTHGTRTLSKNFWNMVKICL  223 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~li~~~l  223 (245)
                      |||||++|+|++|.++|....+.+...............              ...............+..+.++|.+||
T Consensus       187 ~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  266 (298)
T cd07841         187 WSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLL  266 (298)
T ss_pred             HHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHh
Confidence            999999999999988888766655544443322111000              000000001111345788999999999


Q ss_pred             CCCCCCCccHHHHhhccccc
Q 037274          224 APDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       224 ~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.+|.+|||+.+++.|+||.
T Consensus       267 ~~~P~~R~s~~e~l~~~~~~  286 (298)
T cd07841         267 TLNPNKRITARQALEHPYFS  286 (298)
T ss_pred             cCCcccCcCHHHHhhCcccc
Confidence            99999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=3.2e-37  Score=241.53  Aligned_cols=214  Identities=21%  Similarity=0.296  Sum_probs=158.7

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|+.++++++|+||+++++++.+.+..++++||+++ +|.+++..                ....+++..++.++
T Consensus        43 ~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----------------~~~~~~~~~~~~~~  105 (284)
T cd07839          43 PSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDS----------------CNGDIDPEIVKSFM  105 (284)
T ss_pred             ccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-CHHHHHHh----------------cCCCCCHHHHHHHH
Confidence            45678899999999999999999999999999999999985 77554431                13458899999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .||+.||.|||+.|++|+||+|+||+++.        ||.+.......    ...+++.|+|||.+.+ ...++.++|||
T Consensus       106 ~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Diw  184 (284)
T cd07839         106 FQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-AKLYSTSIDMW  184 (284)
T ss_pred             HHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhC-CcccCcHHHHH
Confidence            99999999999999999999999999875        66554332211    2344789999999865 34578999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCCCcc-----------CC-CCCCCCC---CCCcccccHHHHHHHHHh
Q 037274          159 LIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPKSTS-----------LQ-VAPNEDT---THGTRTLSKNFWNMVKIC  222 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~-----------~~-~~~~~~~---~~~~~~~~~~~~~li~~~  222 (245)
                      |||+++|+|++|..|+..... ......+.........           .. .+.....   ......+++++.+++.+|
T Consensus       185 slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  264 (284)
T cd07839         185 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNL  264 (284)
T ss_pred             HHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHH
Confidence            999999999999988654333 2222222211110000           00 0000000   011135788999999999


Q ss_pred             cCCCCCCCccHHHHhhcccc
Q 037274          223 LAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       223 l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      |+.||.+|||+++++.||||
T Consensus       265 l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         265 LVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             hcCChhhcCCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.4e-36  Score=237.96  Aligned_cols=210  Identities=21%  Similarity=0.353  Sum_probs=164.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+++++.++||||+++++++...+..++|+||+++++|.+++..                 ...+++..+
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~  105 (284)
T cd06620          43 KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK-----------------GGPIPVEIL  105 (284)
T ss_pred             cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh-----------------ccCCCHHHH
Confidence            455678899999999999999999999999999999999999999999766642                 245788999


Q ss_pred             HHHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCcccccc--CCCCccccccccCceecCCCCCCCchh
Q 037274           87 AIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWI--SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ..++.+++.||.|||+ .+++|+||+|+||+++.        ||++.....  .....++..|+|||.+.+  ..++.++
T Consensus       106 ~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~  183 (284)
T cd06620         106 GKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQG--GKYTVKS  183 (284)
T ss_pred             HHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHHHHcc--CCCCccc
Confidence            9999999999999997 58999999999999876        655433211  123456889999999876  5688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchH-------HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLD-------IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      |+|||||++|++++|..||.......       .............     .+.   ......+..+.+++.+||+.||.
T Consensus       184 Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~li~~~l~~dp~  255 (284)
T cd06620         184 DVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-----PPR---LPSSDFPEDLRDFVDACLLKDPT  255 (284)
T ss_pred             hHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-----CCC---CCchhcCHHHHHHHHHHhcCCcc
Confidence            99999999999999999998654320       0111111111000     000   01123678899999999999999


Q ss_pred             CCccHHHHhhccccc
Q 037274          229 KRPAAEAQVLQEMWH  243 (245)
Q Consensus       229 ~Rpt~~~~l~~~~f~  243 (245)
                      +|||+.++++|+||.
T Consensus       256 ~Rpt~~e~~~~~~~~  270 (284)
T cd06620         256 ERPTPQQLCAMPPFI  270 (284)
T ss_pred             cCcCHHHHhcCcccc
Confidence            999999999999984

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=2e-36  Score=233.62  Aligned_cols=199  Identities=19%  Similarity=0.306  Sum_probs=159.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++...+..+++|||+.+|+|.+++..                ....+++..++.+
T Consensus        42 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~----------------~~~~~~~~~~~~~  105 (256)
T cd05113          42 SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLRE----------------HGKRFQPSQLLEM  105 (256)
T ss_pred             cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHh----------------cCCCCCHHHHHHH
Confidence            356789999999999999999999999888889999999999999776642                1235788999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||+|||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+  ..++.++|
T Consensus       106 ~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--~~~~~~~D  183 (256)
T cd05113         106 CKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLY--SKFSSKSD  183 (256)
T ss_pred             HHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhc--CcccchhH
Confidence            999999999999999999999999999976        55444322211     1123567999999986  55889999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      +||||+++|+|++ |..||...+.......+.....      .       ......+..+.+++.+||+.+|.+||++.+
T Consensus       184 i~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~  250 (256)
T cd05113         184 VWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR------L-------YRPHLASEKVYAIMYSCWHEKAEERPTFQQ  250 (256)
T ss_pred             HHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC------C-------CCCCCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence            9999999999998 9999987665554444432211      0       011346789999999999999999999999


Q ss_pred             Hhhc
Q 037274          236 QVLQ  239 (245)
Q Consensus       236 ~l~~  239 (245)
                      ++.+
T Consensus       251 ll~~  254 (256)
T cd05113         251 LLSS  254 (256)
T ss_pred             HHHh
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.4e-36  Score=233.23  Aligned_cols=205  Identities=24%  Similarity=0.329  Sum_probs=164.1

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+.+++.++|+||+++++++..++..++++||+++++|.+++..                 ...+++..+.
T Consensus        43 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~  105 (258)
T cd06632          43 QEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKK-----------------YGSFPEPVIR  105 (258)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHh-----------------cCCCCHHHHH
Confidence            45678899999999999999999999999999999999999999999777642                 2357888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      .++.|++.||+|||+.|++|+||+|+||+++.        ||.+......   ....+++.|+|||.+.. ...++.++|
T Consensus       106 ~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~~D  184 (258)
T cd06632         106 LYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQ-QGGYGLAAD  184 (258)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCHHHhcC-CCCCCchhh
Confidence            99999999999999999999999999999875        5544332221   23445888999999875 223889999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      +||||+++|++++|..||................   .   .      ...+..+++.+.+++.+||+.+|.+||++.++
T Consensus       185 ~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~---~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  252 (258)
T cd06632         185 IWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK---E---L------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAEL  252 (258)
T ss_pred             hHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc---c---C------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHH
Confidence            9999999999999999998755333322221101   0   0      01124578899999999999999999999999


Q ss_pred             hhcccc
Q 037274          237 VLQEMW  242 (245)
Q Consensus       237 l~~~~f  242 (245)
                      +.|||+
T Consensus       253 l~~~~~  258 (258)
T cd06632         253 LEHPFV  258 (258)
T ss_pred             hcCCCC
Confidence            999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=3.6e-36  Score=233.45  Aligned_cols=203  Identities=21%  Similarity=0.308  Sum_probs=162.8

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ........+.+|+.++++++||||+++++.+...+..++++|++++++|.+++..                ....+++..
T Consensus        44 ~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~----------------~~~~~~~~~  107 (266)
T cd05033          44 SSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRE----------------NDGKFTVGQ  107 (266)
T ss_pred             CChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHh----------------ccCCCCHHH
Confidence            3455667899999999999999999999999999999999999999999777652                123678899


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..++.|++.||+|||++|++|+||+|+||+++.        ||.+.......      ...+++.|+|||.+.+  ..+
T Consensus       108 ~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~--~~~  185 (266)
T cd05033         108 LVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAY--RKF  185 (266)
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhcc--CCC
Confidence            9999999999999999999999999999999986        55554432111      1223568999999986  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|++++ |..||...........+....      ..+.       +..+++.+.+++..||+.+|++|
T Consensus       186 ~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~l~~li~~cl~~~p~~R  252 (266)
T cd05033         186 TSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY------RLPP-------PMDCPSALYQLMLDCWQKDRNER  252 (266)
T ss_pred             ccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC------CCCC-------CCCCCHHHHHHHHHHcCCCcccC
Confidence            899999999999999987 999997765554444432211      1111       14578899999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      |++.+++++
T Consensus       253 p~~~ei~~~  261 (266)
T cd05033         253 PTFSQIVST  261 (266)
T ss_pred             cCHHHHHHH
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=4.2e-36  Score=235.69  Aligned_cols=214  Identities=14%  Similarity=0.207  Sum_probs=163.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ......+.+|+.+++.++|+||+++++++...+..+++|||+++|+|.+++......       ..........+...+.
T Consensus        50 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~~~~~~~~~~~~~~  122 (288)
T cd05061          50 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE-------AENNPGRPPPTLQEMI  122 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccc-------cccCCCCCCCCHHHHH
Confidence            344566889999999999999999999998888999999999999999888642110       0011112445677888


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||.|||+++++|+||||+||+++.        ||.+.......      ...++..|+|||.+.+  ..++.
T Consensus       123 ~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--~~~~~  200 (288)
T cd05061         123 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD--GVFTT  200 (288)
T ss_pred             HHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhcc--CCCCh
Confidence            99999999999999999999999999999986        66554322211      1223567999999886  55899


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++|+|||||++|+|++ |..||.+....+....+.....       .      ..+...++.+.+++.+||+.+|.+|||
T Consensus       201 ~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~li~~~l~~~p~~Rps  267 (288)
T cd05061         201 SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-------L------DQPDNCPERVTDLMRMCWQFNPKMRPT  267 (288)
T ss_pred             HhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-------C------CCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence            9999999999999998 7889987655554443322110       0      011345789999999999999999999


Q ss_pred             HHHHhh------ccccc
Q 037274          233 AEAQVL------QEMWH  243 (245)
Q Consensus       233 ~~~~l~------~~~f~  243 (245)
                      +.++++      ||+|+
T Consensus       268 ~~~ll~~l~~~~~~~~~  284 (288)
T cd05061         268 FLEIVNLLKDDLHPSFP  284 (288)
T ss_pred             HHHHHHHHHhhcCCCCC
Confidence            999986      78875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=3.8e-36  Score=236.79  Aligned_cols=218  Identities=16%  Similarity=0.223  Sum_probs=165.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|++++++++||||+++++++..++..++++|++.+++|.+++..........      ......+++..+
T Consensus        59 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~------~~~~~~~~~~~~  132 (296)
T cd05051          59 SDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGL------ACNSKSLSFSTL  132 (296)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccc------cccCCCCCHHHH
Confidence            34567889999999999999999999999999899999999999999988886432111110      112346899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +.++.|++.||+|||+.|++|+||||+||+++.        ||.+......      ....+++.|+|||.+.+  ..++
T Consensus       133 ~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  210 (296)
T cd05051         133 LYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL--GKFT  210 (296)
T ss_pred             HHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc--CCCC
Confidence            999999999999999999999999999999876        6655432211      12233678999999886  5589


Q ss_pred             chhhHHHHHHHHHHHhh--CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          153 CKSDIWLIGITALQFPC--GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      .++||||||+++|++++  +..||...+................. .     .....+...+.++.+++.+||+.||.+|
T Consensus       211 ~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~l~~li~~cl~~~p~~R  284 (296)
T cd05051         211 TKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGR-Q-----IYLPRPPNCPKDIYELMLECWRRDEEDR  284 (296)
T ss_pred             ccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccc-c-----ccCCCccCCCHHHHHHHHHHhccChhcC
Confidence            99999999999999998  67888776655554444322111000 0     0001124567899999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      ||+.++++
T Consensus       285 pt~~el~~  292 (296)
T cd05051         285 PTFREIHL  292 (296)
T ss_pred             CCHHHHHH
Confidence            99999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=3.5e-36  Score=236.41  Aligned_cols=217  Identities=20%  Similarity=0.301  Sum_probs=165.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhh-------HHHHhhhccCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAA-------TQLIMSNRHRY   79 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~-------~~~~~~~~~~~   79 (245)
                      .....+++.+|+++++.++||||+++++.+..++..++++||+.+++|.+++..........       ...........
T Consensus        43 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (290)
T cd05045          43 SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDER  122 (290)
T ss_pred             CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCcccc
Confidence            34556789999999999999999999999999999999999999999999886432110000       00001111234


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceec
Q 037274           80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVN  145 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~  145 (245)
                      .+++..+..++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ...++..|+|||.+.
T Consensus       123 ~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~  202 (290)
T cd05045         123 ALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLF  202 (290)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHc
Confidence            5889999999999999999999999999999999999985        66654332211      122366899999987


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcC
Q 037274          146 FGDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       146 ~~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      +  ..++.++||||||+++++|++ |..||.+.......+......      ...       .+..++.++.+++..||+
T Consensus       203 ~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~~i~~cl~  267 (290)
T cd05045         203 D--HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGY------RME-------RPENCSEEMYNLMLTCWK  267 (290)
T ss_pred             c--CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC------CCC-------CCCCCCHHHHHHHHHHcc
Confidence            6  568899999999999999998 999998765544444332211      111       115578899999999999


Q ss_pred             CCCCCCccHHHHhh
Q 037274          225 PDPAKRPAAEAQVL  238 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~  238 (245)
                      .+|.+||++.++++
T Consensus       268 ~~P~~Rp~~~~i~~  281 (290)
T cd05045         268 QEPDKRPTFADISK  281 (290)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.8e-36  Score=237.53  Aligned_cols=209  Identities=23%  Similarity=0.373  Sum_probs=159.5

Q ss_pred             HHHHHHHHHHHHhhC-CCCCeeeEEEEEE-----eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           10 EYAKLAREIYRYKHL-SHPNIIPIYKTMI-----SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ....+.+|+.+++.+ +|+||+++++++.     .++..+++|||+++++|.+++..           ..  .....+++
T Consensus        57 ~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------~~--~~~~~~~~  123 (286)
T cd06638          57 IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKG-----------FL--KRGERMEE  123 (286)
T ss_pred             hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHH-----------hh--ccCccccH
Confidence            346788999999999 6999999999873     34568999999999999776642           01  11345788


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCC---C
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFG---D  148 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~---~  148 (245)
                      ..+..++.|++.||.|||+.+++|+||||+||+++.        ||.+......    ....+++.|+|||.+..+   .
T Consensus       124 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  203 (286)
T cd06638         124 PIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLD  203 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhcc
Confidence            999999999999999999999999999999999886        6655433221    233468899999998642   1


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ..++.++|+|||||++|++++|..||...............    ....       ...+..++..+.+++.+||+.+|+
T Consensus       204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~li~~~l~~~p~  272 (286)
T cd06638         204 STYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN----PPPT-------LHQPELWSNEFNDFIRKCLTKDYE  272 (286)
T ss_pred             ccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc----CCCc-------ccCCCCcCHHHHHHHHHHccCCcc
Confidence            34788999999999999999999999875433222111100    0000       011134678899999999999999


Q ss_pred             CCccHHHHhhcccc
Q 037274          229 KRPAAEAQVLQEMW  242 (245)
Q Consensus       229 ~Rpt~~~~l~~~~f  242 (245)
                      +|||+.++++|+||
T Consensus       273 ~Rps~~ell~~~~~  286 (286)
T cd06638         273 KRPTVSDLLQHVFI  286 (286)
T ss_pred             cCCCHHHHhhcccC
Confidence            99999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=4.3e-36  Score=231.88  Aligned_cols=201  Identities=19%  Similarity=0.282  Sum_probs=158.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++|+||+++++.+. .+..++|+||+++++|.+++..                ....+++..+
T Consensus        35 ~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~   97 (257)
T cd05115          35 EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSG----------------KKDEITVSNV   97 (257)
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHh----------------CCCCCCHHHH
Confidence            3445677999999999999999999999875 4568999999999999776642                1346889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +.++.|++.||.|||++|++|+||||+||+++.        ||.+.......       ...+++.|+|||.+..  ..+
T Consensus        98 ~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  175 (257)
T cd05115          98 VELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINF--RKF  175 (257)
T ss_pred             HHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHcc--CCC
Confidence            999999999999999999999999999999875        66654322211       1112467999999876  558


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|+||||+++|++++ |..||......+....+....      ..       ..+...++++.+++.+||+.+|++|
T Consensus       176 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~l~~li~~c~~~~~~~R  242 (257)
T cd05115         176 SSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK------RL-------DCPAECPPEMYALMKDCWIYKWEDR  242 (257)
T ss_pred             CchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC------CC-------CCCCCCCHHHHHHHHHHcCCChhhC
Confidence            899999999999999996 999998866555443332221      00       0114568899999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      |++.++.+.
T Consensus       243 p~~~~i~~~  251 (257)
T cd05115         243 PNFAKVEER  251 (257)
T ss_pred             cCHHHHHHH
Confidence            999998753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=2.6e-36  Score=237.58  Aligned_cols=217  Identities=20%  Similarity=0.276  Sum_probs=162.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++|+||+++++++..++..++|+||+++ +|.+.+.               ......+++..+..+
T Consensus        44 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~---------------~~~~~~~~~~~~~~~  107 (294)
T PLN00009         44 VPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMD---------------SSPDFAKNPRLIKTY  107 (294)
T ss_pred             chHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecccc-cHHHHHH---------------hCCCCCcCHHHHHHH
Confidence            446788999999999999999999999999999999999974 7755443               222334678888899


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.||+.||+|||++|++|+||+|+||+++.         ||.+......    ....+++.|+|||.+.+ ...++.++|
T Consensus       108 ~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~~D  186 (294)
T PLN00009        108 LYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLG-SRHYSTPVD  186 (294)
T ss_pred             HHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhC-CCCCCcHHH
Confidence            999999999999999999999999999974         5554332211    12234788999998864 345788999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC---------------CCCCCCCCcccccHHHHHHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA---------------PNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~  221 (245)
                      +||||+++|++++|..||......+..................               ............++.+.+++.+
T Consensus       187 v~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  266 (294)
T PLN00009        187 IWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSK  266 (294)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHH
Confidence            9999999999999999998766655554443322111100000               0000001113567889999999


Q ss_pred             hcCCCCCCCccHHHHhhccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ||+.+|++||++.++++||||.
T Consensus       267 ~l~~~P~~Rps~~~~l~~~~~~  288 (294)
T PLN00009        267 MLRLDPSKRITARAALEHEYFK  288 (294)
T ss_pred             HccCChhhCcCHHHHhcCchHh
Confidence            9999999999999999999985

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.2e-37  Score=247.05  Aligned_cols=211  Identities=20%  Similarity=0.242  Sum_probs=154.1

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKET   93 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi   93 (245)
                      ...|+.++++++|+||+++++++...+..++|+|++. ++|.+++..                ....+++..+..++.||
T Consensus       104 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~----------------~~~~~~~~~~~~i~~qi  166 (357)
T PHA03209        104 TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTK----------------RSRPLPIDQALIIEKQI  166 (357)
T ss_pred             cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHh----------------ccCCCCHHHHHHHHHHH
Confidence            4579999999999999999999999999999999996 477555531                13468899999999999


Q ss_pred             HHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhHHHHHH
Q 037274           94 LKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGI  162 (245)
Q Consensus        94 ~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~  162 (245)
                      +.||.|||+.|++||||||+||+++.        ||.+......   ....+|+.|+|||.+.+  ..++.++|||||||
T Consensus       167 ~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGv  244 (357)
T PHA03209        167 LEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLAR--DKYNSKADIWSAGI  244 (357)
T ss_pred             HHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCC--CCCCchhhHHHHHH
Confidence            99999999999999999999999876        7766533221   13456899999999987  56899999999999


Q ss_pred             HHHHHhhCCCCCCCCCchH----------HHHHHHhcCCC-CccCC-------------------CCCCCCCCCCccccc
Q 037274          163 TALQFPCGGLPVSRRQDLD----------IMTKMLMKQPK-STSLQ-------------------VAPNEDTTHGTRTLS  212 (245)
Q Consensus       163 ~l~~~~~g~~p~~~~~~~~----------~~~~~~~~~~~-~~~~~-------------------~~~~~~~~~~~~~~~  212 (245)
                      ++|+|+++..++.......          .+..+...... ...+.                   .+............+
T Consensus       245 vl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (357)
T PHA03209        245 VLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLP  324 (357)
T ss_pred             HHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCC
Confidence            9999998655543321111          11111111100 00000                   000000001113456


Q ss_pred             HHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          213 KNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       213 ~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..+.++|.+||+.||.+|||+.++++||||.
T Consensus       325 ~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~  355 (357)
T PHA03209        325 IDGEFLVHKMLTFDAAMRPSAEEILNYPMFA  355 (357)
T ss_pred             chHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence            7788899999999999999999999999996

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=2.3e-36  Score=237.52  Aligned_cols=205  Identities=22%  Similarity=0.302  Sum_probs=164.3

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.+++.++|+||+++++.+..++..++++||+++++|.+++.                  ...+++..+.
T Consensus        58 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~------------------~~~~~~~~~~  119 (292)
T cd06657          58 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT------------------HTRMNEEQIA  119 (292)
T ss_pred             hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHh------------------cCCCCHHHHH
Confidence            3456779999999999999999999999999999999999999999966553                  2347888899


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||+|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+..  ..++.++
T Consensus       120 ~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--~~~~~~~  197 (292)
T cd06657         120 AVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR--LPYGPEV  197 (292)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcC--CCCCchh
Confidence            99999999999999999999999999999975        5544332221    12345788999999876  5578999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||+|+++|++++|..||...................           ......++..+.+++.+||+.+|.+||++++
T Consensus       198 Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~  266 (292)
T cd06657         198 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK-----------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAE  266 (292)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc-----------cCCcccCCHHHHHHHHHHHhCCcccCcCHHH
Confidence            99999999999999999998755444433332221100           0011446788999999999999999999999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      ++.||||.
T Consensus       267 ll~~~~~~  274 (292)
T cd06657         267 LLKHPFLA  274 (292)
T ss_pred             HhcChHHh
Confidence            99999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=5.6e-36  Score=237.55  Aligned_cols=207  Identities=22%  Similarity=0.403  Sum_probs=165.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+++++.++|||++++++++.+.+..++++||+.+ ++.+++..                ....+++..+.
T Consensus        62 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~----------------~~~~l~~~~~~  124 (313)
T cd06633          62 NEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEV----------------HKKPLQEVEIA  124 (313)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHh----------------cCCCCCHHHHH
Confidence            34567789999999999999999999999999999999999974 77555431                13457889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCccccccccCceecC-CCCCCCchhhHH
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSITTWAAAPEVVNF-GDDYYSCKSDIW  158 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~~Dvw  158 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||.+..........++..|+|||.+.. ....++.++|+|
T Consensus       125 ~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~  204 (313)
T cd06633         125 AITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVW  204 (313)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhhccccCCCCCCchhhHH
Confidence            99999999999999999999999999999875        665554444445566889999999853 124578899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      |||+++|+|++|..||...+.............         +   ......++..+.+++.+||+.+|.+||++.+++.
T Consensus       205 slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---------~---~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         205 SLGITCIELAERKPPLFNMNAMSALYHIAQNDS---------P---TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC---------C---CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999988655444443322110         0   0111446778999999999999999999999999


Q ss_pred             ccccc
Q 037274          239 QEMWH  243 (245)
Q Consensus       239 ~~~f~  243 (245)
                      ||||+
T Consensus       273 ~~~~~  277 (313)
T cd06633         273 HDFVR  277 (313)
T ss_pred             CcccC
Confidence            99986

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2e-36  Score=237.24  Aligned_cols=205  Identities=27%  Similarity=0.408  Sum_probs=164.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++|+||+++++.+..++..++++||+++++|.+++...                ...+++..+..+
T Consensus        58 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~l~~~~~~~i  121 (286)
T cd06614          58 NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQN----------------FVRMNEPQIAYV  121 (286)
T ss_pred             hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHh----------------ccCCCHHHHHHH
Confidence            5678899999999999999999999999999999999999999998777521                136888999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||++||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.++|+
T Consensus       122 ~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~Dv  199 (286)
T cd06614         122 CREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKR--KDYGPKVDI  199 (286)
T ss_pred             HHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcC--CCCCCcccc
Confidence            999999999999999999999999999985        4433322211    12335788999999876  558899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|++++|..||...........+.....       ..    ......++..+.++++.||+.+|.+||++.+++
T Consensus       200 ~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il  268 (286)
T cd06614         200 WSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI-------PP----LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELL  268 (286)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-------CC----CcchhhCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence            9999999999999999987554443333221110       00    011134788999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      .|+||.
T Consensus       269 ~~~~~~  274 (286)
T cd06614         269 QHPFLK  274 (286)
T ss_pred             hChHhh
Confidence            999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.6e-36  Score=252.73  Aligned_cols=215  Identities=16%  Similarity=0.110  Sum_probs=153.3

Q ss_pred             HHHHHHHHHHHHHhhCCC------CCeeeEEEEEEeC-ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            9 EEYAKLAREIYRYKHLSH------PNIIPIYKTMISQ-RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h------~~Iv~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ........|+++++.++|      .+++++++++..+ +..|+|++++ +++|.+++..                 ...+
T Consensus       167 ~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~-----------------~~~l  228 (467)
T PTZ00284        167 KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMK-----------------HGPF  228 (467)
T ss_pred             hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHH-----------------cCCC
Confidence            344556778888877754      4588898888764 4689999988 4577555531                 2468


Q ss_pred             cHHHHHHHHHHHHHHHHHHHh-CCcccccCCCCceeccc------------------------ccCccccc-cCCCCccc
Q 037274           82 TVDCLAIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI------------------------FNDDTRNW-ISSSSSIT  135 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~------------------------f~~~~~~~-~~~~~~~~  135 (245)
                      ++..+..++.||+.||.|||+ .||+||||||+|||++.                        ||.+.... ......+|
T Consensus       229 ~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt  308 (467)
T PTZ00284        229 SHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVST  308 (467)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccccccCC
Confidence            889999999999999999998 59999999999999863                        44332211 11234569


Q ss_pred             cccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc--------------C----C
Q 037274          136 TWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS--------------L----Q  197 (245)
Q Consensus       136 ~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------~----~  197 (245)
                      +.|+|||++.+  ..++.++|||||||++|||++|+.||...+..+....+.........              .    .
T Consensus       309 ~~Y~APE~~~~--~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  386 (467)
T PTZ00284        309 RHYRSPEVVLG--LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ  386 (467)
T ss_pred             ccccCcHHhhc--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc
Confidence            99999999987  66899999999999999999999999887665544433222110000              0    0


Q ss_pred             CCCCCC----------CCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          198 VAPNED----------TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       198 ~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..+...          ........++.+.+||.+||+.||.+|||++++++||||.
T Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~  442 (467)
T PTZ00284        387 LRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVL  442 (467)
T ss_pred             ccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccc
Confidence            000000          0000011245678999999999999999999999999985

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-37  Score=242.23  Aligned_cols=211  Identities=16%  Similarity=0.155  Sum_probs=177.1

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      +..+...-..+|.++|++++.+.||.+-.+|++.+.+|+|+..+.||+|               ..++.+.+...++++.
T Consensus       224 Kkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDL---------------kfHiyn~g~~gF~e~r  288 (591)
T KOG0986|consen  224 KKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDL---------------KFHIYNHGNPGFDEQR  288 (591)
T ss_pred             HHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCce---------------eEEeeccCCCCCchHH
Confidence            3455666788999999999999999999999999999999999999999               6666676778899999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCCch
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +..++++|+.||.+||..+||.|||||+|||+++        +|++.....+.   ...||.+|||||++..  ..|+..
T Consensus       289 a~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~n--e~Y~~s  366 (591)
T KOG0986|consen  289 ARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQN--EVYDFS  366 (591)
T ss_pred             HHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcC--CcccCC
Confidence            9999999999999999999999999999999998        55554444433   2367999999999997  459999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---  231 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---  231 (245)
                      +|-|||||++|+|+.|..||..........++.+.....          ....+...|++.+++++.+|..||.+|.   
T Consensus       367 ~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~----------~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  367 PDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED----------PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             ccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc----------hhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence            999999999999999999998866655554444433111          1112277899999999999999999998   


Q ss_pred             --cHHHHhhccccc
Q 037274          232 --AAEAQVLQEMWH  243 (245)
Q Consensus       232 --t~~~~l~~~~f~  243 (245)
                        +++++.+||||+
T Consensus       437 g~ga~evk~HpfFk  450 (591)
T KOG0986|consen  437 GEGAQEVKEHPFFK  450 (591)
T ss_pred             CcCcchhhhCcccc
Confidence              578899999996

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=7.8e-37  Score=239.54  Aligned_cols=215  Identities=20%  Similarity=0.314  Sum_probs=163.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+++++.++||||+++++++..++..++++||+++++|..+...                 ...+++..+..+
T Consensus        43 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----------------~~~~~~~~~~~~  105 (286)
T cd07846          43 VKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKY-----------------PNGLDESRVRKY  105 (286)
T ss_pred             hhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhc-----------------cCCCCHHHHHHH
Confidence            456788999999999999999999999999999999999999888554431                 234789999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||+|||+.|++|+||+|+||+++.        ||.+.......    ...++..|+|||.+.+ ...++.++||
T Consensus       106 ~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv  184 (286)
T cd07846         106 LFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVG-DTKYGRAVDI  184 (286)
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhcc-ccccCchHhH
Confidence            999999999999999999999999999976        55544322211    2345788999999864 3446789999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc--------------CCCCC---CCCCCCCcccccHHHHHHHH
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS--------------LQVAP---NEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~---~~~~~~~~~~~~~~~~~li~  220 (245)
                      ||||+++|++++|++||......+....+.........              ...+.   ..........++..+.+++.
T Consensus       185 ~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  264 (286)
T cd07846         185 WAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAK  264 (286)
T ss_pred             HHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHH
Confidence            99999999999999999876554433333221110000              00000   00000011356888999999


Q ss_pred             HhcCCCCCCCccHHHHhhcccc
Q 037274          221 ICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      +||+.+|++||++.++++||||
T Consensus       265 ~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         265 QCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             HHhcCCcccchhHHHHhcCCCC
Confidence            9999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-36  Score=237.48  Aligned_cols=217  Identities=18%  Similarity=0.250  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|++++++++|+||+++++.+..++..++++||++++.+..+..                 ....+++..++
T Consensus        41 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-----------------~~~~~~~~~~~  103 (288)
T cd07833          41 EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEA-----------------SPGGLPPDAVR  103 (288)
T ss_pred             ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHh-----------------cCCCCCHHHHH
Confidence            3345789999999999999999999999999999999999999877744332                 13457899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+ ...++.+
T Consensus       104 ~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~  182 (288)
T cd07833         104 SYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVG-DTNYGKP  182 (288)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcC-CCCcCch
Confidence            99999999999999999999999999999876        55544333222     2344788999999986 2268899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCc--------------cCCCCCCCCC----CCCcccccHHHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST--------------SLQVAPNEDT----THGTRTLSKNFW  216 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~----~~~~~~~~~~~~  216 (245)
                      +|+||||+++|++++|..||...+..+.............              ..........    ...+..++.++.
T Consensus       183 ~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (288)
T cd07833         183 VDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPAL  262 (288)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHH
Confidence            9999999999999999999987655443333222110000              0000000000    011234588999


Q ss_pred             HHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          217 NMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       217 ~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      ++|.+||..+|++|||++++++||||
T Consensus       263 ~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         263 DFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             HHHHHHhccCchhcccHHHHhcCCCC
Confidence            99999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-36  Score=233.11  Aligned_cols=199  Identities=20%  Similarity=0.346  Sum_probs=158.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++|+||+++++++...+..++++|++++++|.+++..                ....+++..+..+
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~i  105 (256)
T cd05059          42 SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRE----------------RKGKLGTEWLLDM  105 (256)
T ss_pred             CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHh----------------cccCCCHHHHHHH
Confidence            345688899999999999999999999988999999999999999776642                1235789999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||+|||+.|++|+||||+||+++.        ||.+.......     ...++..|+|||.+.+  ..++.++|
T Consensus       106 ~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~--~~~~~~~D  183 (256)
T cd05059         106 CSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDY--SRFSSKSD  183 (256)
T ss_pred             HHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhcc--CCCCchhh
Confidence            999999999999999999999999999875        55554332211     1112357999999986  56889999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      +||||+++|++++ |..||......+.........      ..       ..+...+.++.+++.+||..+|++|||+.+
T Consensus       184 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  250 (256)
T cd05059         184 VWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY------RL-------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKK  250 (256)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC------cC-------CCCCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence            9999999999998 899998766555444332221      11       111457889999999999999999999999


Q ss_pred             Hhhc
Q 037274          236 QVLQ  239 (245)
Q Consensus       236 ~l~~  239 (245)
                      +++.
T Consensus       251 ~l~~  254 (256)
T cd05059         251 LLSQ  254 (256)
T ss_pred             HHHH
Confidence            9864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=3.8e-36  Score=235.36  Aligned_cols=216  Identities=15%  Similarity=0.226  Sum_probs=165.6

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.++++++||||+++++++...+..++++||+.+++|.+++............ ......+..+++..+.
T Consensus        49 ~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  127 (283)
T cd05091          49 GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGST-DDDKTVKSTLEPADFV  127 (283)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCcccccc-ccccccccccCHHHHH
Confidence            345677899999999999999999999999989999999999999999988643322111000 0011123458888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||.|+|+.|++||||||+||+++.        ||++.......      ...+++.|+|||.+.+  ..++.
T Consensus       128 ~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  205 (283)
T cd05091         128 HIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY--GKFSI  205 (283)
T ss_pred             HHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhc--CCCCc
Confidence            99999999999999999999999999999875        66554332211      2223678999999976  55889


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|+|++ |..||.+....+....+......             ..+..++..+.+++..||+.+|.+||+
T Consensus       206 ~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~~~~li~~cl~~~p~~RP~  272 (283)
T cd05091         206 DSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVL-------------PCPDDCPAWVYTLMLECWNEFPSRRPR  272 (283)
T ss_pred             chhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-------------CCCCCCCHHHHHHHHHHhCCCcccCCC
Confidence            9999999999999998 88898876665554444332210             112567889999999999999999999


Q ss_pred             HHHHhhc
Q 037274          233 AEAQVLQ  239 (245)
Q Consensus       233 ~~~~l~~  239 (245)
                      +.+++..
T Consensus       273 ~~~i~~~  279 (283)
T cd05091         273 FKDIHSR  279 (283)
T ss_pred             HHHHHHH
Confidence            9999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=5.5e-36  Score=231.54  Aligned_cols=207  Identities=17%  Similarity=0.281  Sum_probs=165.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++.++.++|+||+++++++..++..++++||+++++|.+++.......        .......+++..++.+
T Consensus        39 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~~~~~~~~~~~~~~  110 (262)
T cd00192          39 ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVF--------PSPEKSTLSLKDLLSF  110 (262)
T ss_pred             HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccc--------cccccccCCHHHHHHH
Confidence            47889999999999999999999999999899999999999999988776321000        0001356899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCCchh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      +.|++.||++||++|++|+||+|+||+++.        ||.+......      ....+++.|+|||.+..  ..++.++
T Consensus       111 ~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~  188 (262)
T cd00192         111 AIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKD--GIFTSKS  188 (262)
T ss_pred             HHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhcc--CCcchhh
Confidence            999999999999999999999999999987        5555444332      13344788999999886  4689999


Q ss_pred             hHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      |+||||+++|++++ |..||................      ..       ..+..++.++.+++.+||..+|.+|||+.
T Consensus       189 Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~  255 (262)
T cd00192         189 DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY------RL-------PKPEYCPDELYELMLSCWQLDPEDRPTFS  255 (262)
T ss_pred             ccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC------CC-------CCCccCChHHHHHHHHHccCCcccCcCHH
Confidence            99999999999998 699998876555544443311      11       11145688999999999999999999999


Q ss_pred             HHhhc
Q 037274          235 AQVLQ  239 (245)
Q Consensus       235 ~~l~~  239 (245)
                      +++++
T Consensus       256 ~l~~~  260 (262)
T cd00192         256 ELVER  260 (262)
T ss_pred             HHHHh
Confidence            99874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.3e-36  Score=254.34  Aligned_cols=220  Identities=18%  Similarity=0.174  Sum_probs=157.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ......+.+|+.++++++|+||+++++++...+..+++++++.+ +|.+++....          ...  ........+.
T Consensus       204 ~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~----------~~~--~~~~~~~~~~  270 (501)
T PHA03210        204 SRAAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEA----------FDW--KDRPLLKQTR  270 (501)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEecccc-CHHHHHhhcc----------ccc--cccccHHHHH
Confidence            34556788999999999999999999999999999999999865 6655543211          000  1223356677


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|++.||.|||++||+||||||+|||++.        ||++.......     ...|++.|+|||.+.+  ..++.+
T Consensus       271 ~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  348 (501)
T PHA03210        271 AIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG--DGYCEI  348 (501)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC--CCCCcH
Confidence            89999999999999999999999999999975        88775443221     2457999999999987  568999


Q ss_pred             hhHHHHHHHHHHHhhCCCC-CCCCCc--hHHHHHHHhcCCCCccCCCCCC-------------------CCCCCCccccc
Q 037274          155 SDIWLIGITALQFPCGGLP-VSRRQD--LDIMTKMLMKQPKSTSLQVAPN-------------------EDTTHGTRTLS  212 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~  212 (245)
                      +|||||||++|+|++|..+ +.....  .............. ....+..                   ..........+
T Consensus       349 ~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  427 (501)
T PHA03210        349 TDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVC-DEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLP  427 (501)
T ss_pred             HHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccC-hhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCC
Confidence            9999999999999998754 433221  12222222111100 0000000                   00000113456


Q ss_pred             HHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          213 KNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       213 ~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..+.+++.+||+.||.+|||+.+++.||||.
T Consensus       428 ~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~  458 (501)
T PHA03210        428 ADFEYPLVKMLTFDWHLRPGAAELLALPLFS  458 (501)
T ss_pred             hHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence            7788999999999999999999999999995

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=8.2e-36  Score=230.34  Aligned_cols=199  Identities=17%  Similarity=0.274  Sum_probs=157.4

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.+++.++|+||+++++++. .+..++++|++++|+|.+++..                 ...+++..+.
T Consensus        37 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~   98 (257)
T cd05116          37 PALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQK-----------------NKHVTEKNIT   98 (257)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHh-----------------cCCCCHHHHH
Confidence            446678999999999999999999999875 4567999999999999776642                 2457889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      .++.|++.||.|||++|++|+||||.||+++.        ||.+.......       ...++..|+|||.+..  ..++
T Consensus        99 ~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  176 (257)
T cd05116          99 ELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNY--YKFS  176 (257)
T ss_pred             HHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhcc--CCcC
Confidence            99999999999999999999999999999875        66554332221       1122468999999876  5688


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|+||||+++|+|++ |..||......+....+....      ..       ..+...++++.++|.+||+.||.+||
T Consensus       177 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~------~~-------~~~~~~~~~l~~li~~~~~~~p~~Rp  243 (257)
T cd05116         177 SKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE------RM-------ECPQRCPPEMYDLMKLCWTYGVDERP  243 (257)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC------CC-------CCCCCCCHHHHHHHHHHhccCchhCc
Confidence            99999999999999997 999998765554444432211      00       11145789999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      ++++|...
T Consensus       244 ~~~~i~~~  251 (257)
T cd05116         244 GFAVVELR  251 (257)
T ss_pred             CHHHHHHH
Confidence            99998653

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=1.3e-36  Score=239.15  Aligned_cols=204  Identities=23%  Similarity=0.331  Sum_probs=162.3

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.++++++||||+++++.+..++..++|+||+++++|.+++.                  ...+++..+..
T Consensus        58 ~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~------------------~~~l~~~~~~~  119 (293)
T cd06647          58 PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT------------------ETCMDEGQIAA  119 (293)
T ss_pred             hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHh------------------hcCCCHHHHHH
Confidence            345678999999999999999999999999999999999999999977664                  23467888999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.+.......    ...+++.|+|||.+..  ..++.++|
T Consensus       120 i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~D  197 (293)
T cd06647         120 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--KAYGPKVD  197 (293)
T ss_pred             HHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhcc--CCCCchhh
Confidence            9999999999999999999999999999875        55443222211    2245778999999876  55789999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      +||||+++|++++|..||...+...........           ...........+..+.+++++||..+|.+||+++++
T Consensus       198 v~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~i  266 (293)
T cd06647         198 IWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-----------GTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL  266 (293)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChhhheeehhcC-----------CCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            999999999999999999875443222111100           000111124567889999999999999999999999


Q ss_pred             hhccccc
Q 037274          237 VLQEMWH  243 (245)
Q Consensus       237 l~~~~f~  243 (245)
                      +.|+||+
T Consensus       267 l~h~~~~  273 (293)
T cd06647         267 LQHPFLK  273 (293)
T ss_pred             hcCHHHh
Confidence            9999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=7e-36  Score=232.36  Aligned_cols=217  Identities=18%  Similarity=0.307  Sum_probs=162.7

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+..+.+.+|++++.++ +||||+++++++...+..+++|||+++|+|.+++.......... ...........+++..
T Consensus        35 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~-~~~~~~~~~~~l~~~~  113 (270)
T cd05047          35 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP-AFAIANSTASTLSSQQ  113 (270)
T ss_pred             CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhcccccccc-ccccccCCcCCCCHHH
Confidence            345667899999999999 79999999999999999999999999999999886432110000 0000111234588999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +..++.|++.||+|||+.|++|+||||+||+++.        ||++......   .....+..|+|||.+..  ..++.+
T Consensus       114 ~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~--~~~~~~  191 (270)
T cd05047         114 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY--SVYTTN  191 (270)
T ss_pred             HHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHcc--CCCCch
Confidence            9999999999999999999999999999999975        6655322111   11122567999999876  568899


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +|+||||+++|+|++ |..||...+..+.........      ..       ..+...+.++.+++.+||..+|.+|||+
T Consensus       192 ~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~  258 (270)
T cd05047         192 SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY------RL-------EKPLNCDDEVYDLMRQCWREKPYERPSF  258 (270)
T ss_pred             hhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC------CC-------CCCCcCCHHHHHHHHHHcccChhhCCCH
Confidence            999999999999997 999997755544443332111      00       0113467889999999999999999999


Q ss_pred             HHHhhc
Q 037274          234 EAQVLQ  239 (245)
Q Consensus       234 ~~~l~~  239 (245)
                      .++++.
T Consensus       259 ~~il~~  264 (270)
T cd05047         259 AQILVS  264 (270)
T ss_pred             HHHHHH
Confidence            998863

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=2.1e-36  Score=236.87  Aligned_cols=218  Identities=19%  Similarity=0.222  Sum_probs=163.7

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.++++++|+||+++++++..++..++|+||+++ +|.+++...              .....+++..+..
T Consensus        40 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~--------------~~~~~~~~~~~~~  104 (284)
T cd07836          40 GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTH--------------GVRGALDPNTVKS  104 (284)
T ss_pred             cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhc--------------CCCCCcCHHHHHH
Confidence            3456778899999999999999999999999999999999985 786655421              1124588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.++|
T Consensus       105 ~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~~D  183 (284)
T cd07836         105 FTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLG-SRTYSTSID  183 (284)
T ss_pred             HHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcC-CCCCCcHHH
Confidence            9999999999999999999999999999976        4444322111    12334788999998865 345688999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC-----------CCCCCC----CCCCCcccccHHHHHHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL-----------QVAPNE----DTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~~~~~~~~~li~~  221 (245)
                      +||||+++|++++|+.||.+.+..+....+..........           ....+.    .........+..+.+++.+
T Consensus       184 v~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  263 (284)
T cd07836         184 IWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHR  263 (284)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHH
Confidence            9999999999999999998876655544443321111000           000000    0000012457889999999


Q ss_pred             hcCCCCCCCccHHHHhhcccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      |++.||.+||++.++++||||
T Consensus       264 ~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         264 LLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HhcCCcccCCCHHHHhcCCCC
Confidence            999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=7.5e-37  Score=236.25  Aligned_cols=204  Identities=22%  Similarity=0.276  Sum_probs=164.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++||||+++++.+..++..++++||+.+++|.+++..                 ...+++..+..
T Consensus        42 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~  104 (258)
T cd05578          42 GSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQ-----------------KVKFSEEQVKF  104 (258)
T ss_pred             hHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHh-----------------cCCcCHHHHHH
Confidence            4678899999999999999999999999999999999999999999776642                 24678899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      ++.|++.||.|||++|++|+||+|+||+++.        ||........   ....++..|+|||.+..  ..++.++|+
T Consensus       105 ~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~Di  182 (258)
T cd05578         105 WICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCR--QGYSVAVDW  182 (258)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcc--cCCCCcccc
Confidence            9999999999999999999999999999976        5544433222   23445788999999986  558899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH--HH
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA--EA  235 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~--~~  235 (245)
                      ||||+++|++++|..||...... ...........          .....+...+..+.+++++||+.||.+||++  .+
T Consensus       183 ~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~  251 (258)
T cd05578         183 WSLGVTAYECLRGKRPYRGHSRT-IRDQIRAKQET----------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKD  251 (258)
T ss_pred             hhhHHHHHHHHhCCCCCCCCCcc-HHHHHHHHhcc----------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHH
Confidence            99999999999999999876542 11111111110          0011124567899999999999999999999  99


Q ss_pred             Hhhcccc
Q 037274          236 QVLQEMW  242 (245)
Q Consensus       236 ~l~~~~f  242 (245)
                      +++||||
T Consensus       252 l~~~~~~  258 (258)
T cd05578         252 LKNHPYF  258 (258)
T ss_pred             HhcCCCC
Confidence            9999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-36  Score=235.77  Aligned_cols=216  Identities=20%  Similarity=0.283  Sum_probs=163.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+++++.++||||+++++++.+++..++++||++ ++|.+++...               ....+++..+..+
T Consensus        41 ~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~---------------~~~~~~~~~~~~~  104 (283)
T cd07835          41 VPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSS---------------PLTGLDPPLIKSY  104 (283)
T ss_pred             chhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhC---------------CCCCCCHHHHHHH
Confidence            34668889999999999999999999999999999999996 5886666421               1245889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||+.+++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.++|+
T Consensus       105 ~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~~Di  183 (283)
T cd07835         105 LYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-SRQYSTPVDI  183 (283)
T ss_pred             HHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeec-CcccCcHHHH
Confidence            999999999999999999999999999976        5554432211    12234788999998865 2346889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc---------------CCCCCCCCCCCCcccccHHHHHHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS---------------LQVAPNEDTTHGTRTLSKNFWNMVKIC  222 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~li~~~  222 (245)
                      ||||+++|+|++|..||...+.......+.........               ...............++..+.+++.+|
T Consensus       184 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  263 (283)
T cd07835         184 WSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKM  263 (283)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHH
Confidence            99999999999999999876665444443332111000               000000011111255778999999999


Q ss_pred             cCCCCCCCccHHHHhhcccc
Q 037274          223 LAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       223 l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      |+.+|.+|||+++++.||||
T Consensus       264 l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         264 LVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             hcCChhhCcCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.8e-36  Score=242.14  Aligned_cols=209  Identities=12%  Similarity=0.152  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++..++|+||+++++++.+++..++||||+++|+|.+++..                ....+++..+..+
T Consensus        44 ~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~----------------~~~~l~~~~~~~~  107 (331)
T cd05624          44 ETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSK----------------FEDRLPEDMARFY  107 (331)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH----------------hcCCCCHHHHHHH
Confidence            455688899999999999999999999999999999999999999777642                1245788899999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCC---CCCCCc
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFG---DDYYSC  153 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~---~~~~~~  153 (245)
                      +.|++.||.|||+.|++||||||+||+++.        ||++.......     ...+++.|+|||.+.+.   ...++.
T Consensus       108 ~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  187 (331)
T cd05624         108 IAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP  187 (331)
T ss_pred             HHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCC
Confidence            999999999999999999999999999975        77665433221     24579999999998641   134788


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC--Cc
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK--RP  231 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp  231 (245)
                      ++|+||||+++|+|++|+.||...+..+....+.....   ....+      .....+++++.+++.+|+..++.+  |+
T Consensus       188 ~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~---~~~~p------~~~~~~~~~~~~li~~ll~~~~~~~~~~  258 (331)
T cd05624         188 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEE---RFQFP------SHITDVSEEAKDLIQRLICSRERRLGQN  258 (331)
T ss_pred             cccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCC---cccCC------CccccCCHHHHHHHHHHccCchhhcCCC
Confidence            99999999999999999999988666555554433211   01111      111346889999999999876654  56


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      +++++++|+||.
T Consensus       259 ~~~~~~~h~~f~  270 (331)
T cd05624         259 GIEDFKKHAFFE  270 (331)
T ss_pred             CHHHHhcCCCcC
Confidence            899999999985

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.2e-36  Score=231.53  Aligned_cols=200  Identities=19%  Similarity=0.302  Sum_probs=159.6

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+++.+|+.++++++|+||+++++++...+..++++|++++++|.+++...               ....+++..+..
T Consensus        43 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~  107 (261)
T cd05068          43 MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGG---------------AGRALKLPQLID  107 (261)
T ss_pred             ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhcc---------------CCCCCCHHHHHH
Confidence            34567899999999999999999999999999999999999999997777531               134578899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--CCcc---ccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--SSSI---TTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--~~~~---~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.|+.+||+.|++|+||||+||+++.        ||.+.......  ...+   +..|+|||.+.+  ..++.++
T Consensus       108 ~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~  185 (261)
T cd05068         108 MAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALY--NRFSIKS  185 (261)
T ss_pred             HHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCcccccc--CCCCchh
Confidence            9999999999999999999999999999976        55544332111  1111   347999999886  5688999


Q ss_pred             hHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      |+||||+++|++++ |..||.+.........+....      ..+       .+...+..+.+++.+|++.+|.+||++.
T Consensus       186 Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~li~~~l~~~P~~Rp~~~  252 (261)
T cd05068         186 DVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY------RMP-------CPPGCPKELYDIMLDCWKEDPDDRPTFE  252 (261)
T ss_pred             hHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC------CCC-------CCCcCCHHHHHHHHHHhhcCcccCCCHH
Confidence            99999999999999 999998766555444433221      111       1145678999999999999999999999


Q ss_pred             HHhh
Q 037274          235 AQVL  238 (245)
Q Consensus       235 ~~l~  238 (245)
                      ++++
T Consensus       253 ~l~~  256 (261)
T cd05068         253 TLQW  256 (261)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.4e-35  Score=235.76  Aligned_cols=208  Identities=23%  Similarity=0.380  Sum_probs=166.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|++++++++|+|++++++++..++..++|+||+.+ +|.+++..                ....+++..+
T Consensus        65 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~----------------~~~~l~~~~~  127 (317)
T cd06635          65 SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEV----------------HKKPLQEVEI  127 (317)
T ss_pred             chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHH----------------hcCCCCHHHH
Confidence            345667899999999999999999999999999999999999975 77554431                1345888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCccccccccCceecC-CCCCCCchhhH
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSITTWAAAPEVVNF-GDDYYSCKSDI  157 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~~Dv  157 (245)
                      ..++.|++.||.|||+.|++|+||+|+||+++.        ||.+..........+++.|+|||.+.. ....++.++|+
T Consensus       128 ~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv  207 (317)
T cd06635         128 AAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDV  207 (317)
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhhhhcCCCCCCCccccH
Confidence            999999999999999999999999999999975        666555444445567889999999753 12457889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|+|++|+.||...+.......+......            ......+++.+.+++.+||+.+|.+||++.+++
T Consensus       208 ~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il  275 (317)
T cd06635         208 WSLGITCIELAERKPPLFNMNAMSALYHIAQNESP------------TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELL  275 (317)
T ss_pred             HHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCC------------CCCCccccHHHHHHHHHHccCCcccCcCHHHHH
Confidence            99999999999999999876544444433322110            011145678899999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +|+|+.
T Consensus       276 ~~~~~~  281 (317)
T cd06635         276 KHMFVL  281 (317)
T ss_pred             hChhhh
Confidence            999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.8e-37  Score=245.98  Aligned_cols=203  Identities=20%  Similarity=0.332  Sum_probs=171.5

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ...+..+++.+|+++|++++|||||++||+...+..+++|||+|.||+|.++++..                +..++..+
T Consensus       200 ~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~----------------~~~v~~~e  263 (474)
T KOG0194|consen  200 LTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKN----------------KKSLPTLE  263 (474)
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhC----------------CCCCCHHH
Confidence            45788999999999999999999999999999999999999999999998888631                23588999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCC----ccccccccCceecCCCCCCCc
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSS----SITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~----~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ...++.+.+.||+|||+++++||||-++|+|++.        ||++.........    .....|+|||.+..  ..+++
T Consensus       264 k~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~--~~~s~  341 (474)
T KOG0194|consen  264 KLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNT--GIFSF  341 (474)
T ss_pred             HHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhcc--Ccccc
Confidence            9999999999999999999999999999999876        8887665422211    23678999999998  57999


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++||+.+ |..||.+....+....+.....     +.+.+       ...+.++..++.+|+..+|++||+
T Consensus       342 kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~-----r~~~~-------~~~p~~~~~~~~~c~~~~p~~R~t  409 (474)
T KOG0194|consen  342 KTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGY-----RMPIP-------SKTPKELAKVMKQCWKKDPEDRPT  409 (474)
T ss_pred             ccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCc-----cCCCC-------CCCHHHHHHHHHHhccCChhhccC
Confidence            9999999999999998 7889999888877777744332     11111       457788999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      +.++.+
T Consensus       410 m~~i~~  415 (474)
T KOG0194|consen  410 MSTIKK  415 (474)
T ss_pred             HHHHHH
Confidence            998764

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=4e-36  Score=235.02  Aligned_cols=212  Identities=21%  Similarity=0.285  Sum_probs=158.0

Q ss_pred             HHHHHHHHHhhCC-CCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           13 KLAREIYRYKHLS-HPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        13 ~~~~E~~~l~~l~-h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ...+|+.+++++. |+||+++++++.++  +..++|+||+++ +|.+.+..                ....+++..+..+
T Consensus        43 ~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~----------------~~~~~~~~~~~~~  105 (282)
T cd07831          43 NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKG----------------RKRPLPEKRVKSY  105 (282)
T ss_pred             hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHh----------------ccCCCCHHHHHHH
Confidence            4457899999885 99999999999887  889999999975 77554431                1246889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc-------ccCccccccCC---CCccccccccCceecCCCCCCCchhhHHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI-------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      +.|++.||.|||+.|++|+||+|+||+++.       ||.+.......   ...+++.|+|||.+.. ...++.++|+||
T Consensus       106 ~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~s  184 (282)
T cd07831         106 MYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLT-DGYYGPKMDIWA  184 (282)
T ss_pred             HHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCCCCcccCChhHhhc-CCCCCcchhHHH
Confidence            999999999999999999999999999886       55444332211   2235788999998754 244688999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCc-------------cCCCCCCC--CCCCCcccccHHHHHHHHHhcC
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST-------------SLQVAPNE--DTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      |||++|+|++|..||.+.+..+.............             ....+...  .........+..+.++|.+||+
T Consensus       185 lGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  264 (282)
T cd07831         185 VGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLA  264 (282)
T ss_pred             HHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhc
Confidence            99999999999999988766554444332211100             00000000  0001113568899999999999


Q ss_pred             CCCCCCccHHHHhhcccc
Q 037274          225 PDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~~~f  242 (245)
                      ++|++||+++++++||||
T Consensus       265 ~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         265 YDPDERITAKQALRHPYF  282 (282)
T ss_pred             cCcccccCHHHHhhCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=6.5e-36  Score=233.52  Aligned_cols=201  Identities=14%  Similarity=0.111  Sum_probs=154.4

Q ss_pred             HHHHHHHHh---hCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           14 LAREIYRYK---HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        14 ~~~E~~~l~---~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ..+|..+++   ..+|+||+.+++.+..++..++||||+++++|.+++..                 ...+++..+..++
T Consensus        41 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-----------------~~~l~~~~~~~i~  103 (279)
T cd05633          41 ALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQ-----------------HGVFSEKEMRFYA  103 (279)
T ss_pred             HHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHh-----------------cCCCCHHHHHHHH
Confidence            444544333   44799999999999999999999999999999766642                 2458999999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC--CCCccccccccCceecCCCCCCCchhhHHHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      .|++.||.|||+.|++|+||||+||+++.        ||.+......  ....+++.|+|||.+.. ...++.++|+|||
T Consensus       104 ~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~sl  182 (279)
T cd05633         104 TEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK-GTAYDSSADWFSL  182 (279)
T ss_pred             HHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcC-CCCCCchhhhHHH
Confidence            99999999999999999999999999965        6655432211  13356899999999863 2457899999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----cHHH
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----AAEA  235 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~  235 (245)
                      |+++|++++|..||......... ....... ..         ....+..++.++.+++++||..||.+||     ++.+
T Consensus       183 G~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~-~~---------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~  251 (279)
T cd05633         183 GCMLFKLLRGHSPFRQHKTKDKH-EIDRMTL-TV---------NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQE  251 (279)
T ss_pred             HHHHHHHHhCCCCcCCCCCcCHH-HHHHHhh-cC---------CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHH
Confidence            99999999999999764332211 1111110 00         0111255789999999999999999999     6999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||+
T Consensus       252 ~~~h~~~~  259 (279)
T cd05633         252 VKEHVFFK  259 (279)
T ss_pred             HHhCcccc
Confidence            99999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-38  Score=274.04  Aligned_cols=205  Identities=22%  Similarity=0.333  Sum_probs=167.8

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|..++..|+|||+|++||.-...+..+|.||||++|+|.++++.                 +.-.++....
T Consensus      1275 ~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~-----------------gri~dE~vt~ 1337 (1509)
T KOG4645|consen 1275 HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEH-----------------GRIEDEMVTR 1337 (1509)
T ss_pred             cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHh-----------------cchhhhhHHH
Confidence            34567788999999999999999999998888899999999999999888863                 3346677778


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--------CCccccccccCceecCCC-CC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAAAPEVVNFGD-DY  150 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~-~~  150 (245)
                      .+..|++.|++|||+.|||||||||.||+++.        ||.+.......        ...||+.|||||.+.+.. ..
T Consensus      1338 vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG 1417 (1509)
T KOG4645|consen 1338 VYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKG 1417 (1509)
T ss_pred             HHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCC
Confidence            88999999999999999999999999999986        77766554432        345699999999999743 34


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      -.-++|||||||++.||+||+.||...+   ..-+++.....+..++.+         ..++.+.++|++.||+.||++|
T Consensus      1418 ~~~A~DiWslGCVVlEM~tGkrPW~~~d---ne~aIMy~V~~gh~Pq~P---------~~ls~~g~dFle~Cl~~dP~~R 1485 (1509)
T KOG4645|consen 1418 HGGAADIWSLGCVVLEMATGKRPWAELD---NEWAIMYHVAAGHKPQIP---------ERLSSEGRDFLEHCLEQDPKMR 1485 (1509)
T ss_pred             CCcchhhhcccceEEEeecCCCchhhcc---chhHHHhHHhccCCCCCc---------hhhhHhHHHHHHHHHhcCchhh
Confidence            5678999999999999999999998733   223333334333333322         4589999999999999999999


Q ss_pred             ccHHHHhhccc
Q 037274          231 PAAEAQVLQEM  241 (245)
Q Consensus       231 pt~~~~l~~~~  241 (245)
                      -++.+++.|.|
T Consensus      1486 w~~~qlle~~f 1496 (1509)
T KOG4645|consen 1486 WTASQLLEHAF 1496 (1509)
T ss_pred             hHHHHHHHhhc
Confidence            99999999976

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=3.9e-36  Score=237.44  Aligned_cols=217  Identities=18%  Similarity=0.305  Sum_probs=162.9

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      +.+..+.+.+|+.++.++ +|+||+++++++..++..++++||+++++|.+++.........- ...........+++..
T Consensus        47 ~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~  125 (303)
T cd05088          47 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP-AFAIANSTASTLSSQQ  125 (303)
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccc-cccccccccCcCCHHH
Confidence            345667889999999999 89999999999999999999999999999998886422110000 0000111234688999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ++.++.|++.||+|||++|++|+||||+||+++.        ||++......   .....+..|+|||.+.+  ..++.+
T Consensus       126 ~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  203 (303)
T cd05088         126 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY--SVYTTN  203 (303)
T ss_pred             HHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhc--cCCccc
Confidence            9999999999999999999999999999999975        6655422111   11122567999999876  558899


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +||||||+++|++++ |..||...+..+.........    .  .       ..+...+..+.+++.+||+.+|.+||++
T Consensus       204 ~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~----~--~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~  270 (303)
T cd05088         204 SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY----R--L-------EKPLNCDDEVYDLMRQCWREKPYERPSF  270 (303)
T ss_pred             ccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC----c--C-------CCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            999999999999998 999998765544433321110    0  0       1113467889999999999999999999


Q ss_pred             HHHhhc
Q 037274          234 EAQVLQ  239 (245)
Q Consensus       234 ~~~l~~  239 (245)
                      ++++++
T Consensus       271 ~~il~~  276 (303)
T cd05088         271 AQILVS  276 (303)
T ss_pred             HHHHHH
Confidence            998864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=6.4e-36  Score=235.19  Aligned_cols=217  Identities=17%  Similarity=0.253  Sum_probs=165.5

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+....+.+|+++++++ +|+||+++++++..++..++++||+++|+|.+++.......... ...........+++..
T Consensus        55 ~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~  133 (293)
T cd05053          55 TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYA-SPDDPRPPEETLTQKD  133 (293)
T ss_pred             CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCcccc-ccccccccccccCHHH
Confidence            445667799999999999 79999999999999999999999999999999886432111000 0000111245688999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ...++..|+|||.+.+  ..+
T Consensus       134 ~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  211 (293)
T cd05053         134 LVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD--RVY  211 (293)
T ss_pred             HHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc--CCc
Confidence            9999999999999999999999999999999986        66554332211      1223567999999876  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|||||||++|++++ |..||................      ..       ..+...+..+.+++.+||..+|++|
T Consensus       212 ~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~~p~~R  278 (293)
T cd05053         212 THQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGY------RM-------EKPQNCTQELYHLMRDCWHEVPSQR  278 (293)
T ss_pred             CcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCC------cC-------CCCCCCCHHHHHHHHHHcccCcccC
Confidence            899999999999999997 899998765555444332221      00       1114567899999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      ||+.+++++
T Consensus       279 ps~~eil~~  287 (293)
T cd05053         279 PTFKQLVED  287 (293)
T ss_pred             cCHHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=5.4e-36  Score=235.08  Aligned_cols=215  Identities=22%  Similarity=0.351  Sum_probs=161.7

Q ss_pred             HHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+....+.+|+.++.++. |+||+++++++..++..++++|++.. ++.++...            ........+++..+
T Consensus        43 ~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~------------~~~~~~~~l~~~~~  109 (288)
T cd06616          43 EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKY------------VYEVLKSVIPEEIL  109 (288)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHH------------HHHhhcCCCCHHHH
Confidence            356678899999999996 99999999999988899999999874 66554431            11112356899999


Q ss_pred             HHHHHHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCC-CCCCc
Q 037274           87 AIAHKETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGD-DYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~-~~~~~  153 (245)
                      ..++.|++.||+|||+. +++|+||||+||+++.        ||++......   ....+++.|+|||.+..+. ..++.
T Consensus       110 ~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  189 (288)
T cd06616         110 GKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDV  189 (288)
T ss_pred             HHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcc
Confidence            99999999999999975 9999999999999875        6655432221   2234688899999987621 36889


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++|+||||+++|++++|+.||.....  .......... ..     .+.........++.++.+++.+||+.+|.+|||+
T Consensus       190 ~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  261 (288)
T cd06616         190 RSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVK-GD-----PPILSNSEEREFSPSFVNFINLCLIKDESKRPKY  261 (288)
T ss_pred             hhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcC-CC-----CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCH
Confidence            99999999999999999999976442  2222211111 00     1111111124578899999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      ++++.||||+
T Consensus       262 ~~i~~~~~~~  271 (288)
T cd06616         262 KELLEHPFIK  271 (288)
T ss_pred             HHHhcChhhh
Confidence            9999999985

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=1.5e-35  Score=228.90  Aligned_cols=200  Identities=20%  Similarity=0.301  Sum_probs=161.4

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|++++++++|+||+++++.+.. +..++++|++++++|.+.+..               .....+++..++.
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~---------------~~~~~~~~~~~~~  101 (257)
T cd05040          38 DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRK---------------DALGHFLISTLCD  101 (257)
T ss_pred             HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHh---------------cccccCcHHHHHH
Confidence            567889999999999999999999999887 889999999999999776652               1114578999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCCCc
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ++.|++.||.|||++|++|+||+|+||+++.        ||.+.......       ...++..|+|||.+.+  ..++.
T Consensus       102 ~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--~~~~~  179 (257)
T cd05040         102 YAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRT--RTFSH  179 (257)
T ss_pred             HHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcc--cCcCc
Confidence            9999999999999999999999999999975        66554433211       2334678999999886  56889


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|+|++ |..||...+..+....+.....     ..       ..+...+..+.+++..||+.+|++||+
T Consensus       180 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps  247 (257)
T cd05040         180 ASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGE-----RL-------ERPEACPQDIYNVMLQCWAHNPADRPT  247 (257)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC-----cC-------CCCccCCHHHHHHHHHHCCCCcccCCC
Confidence            9999999999999998 9999987666555544432110     00       011456789999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      +.++++
T Consensus       248 ~~~~~~  253 (257)
T cd05040         248 FAALRE  253 (257)
T ss_pred             HHHHHH
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=9.1e-36  Score=234.12  Aligned_cols=214  Identities=20%  Similarity=0.253  Sum_probs=155.5

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ...+.+|+++++.++|+||+++++++..++..++++||+. +++.+.+..                ....+++..+..++
T Consensus        47 ~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----------------~~~~~~~~~~~~~~  109 (291)
T cd07870          47 PFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQ----------------HPGGLHPYNVRLFM  109 (291)
T ss_pred             cHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHh----------------CCCCCCHHHHHHHH
Confidence            3467889999999999999999999999999999999997 566443321                12346778888999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .|++.||+|||+.|++|+||||+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.++|+|
T Consensus       110 ~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~  188 (291)
T cd07870         110 FQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLG-ATDYSSALDIW  188 (291)
T ss_pred             HHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeec-CCCCCcHHHHH
Confidence            99999999999999999999999999875        6655433221    12335889999999874 34578899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCch-HHHHHHHhcCCCCc----------------cCCCCCCC--CCCCCcccccHHHHHHH
Q 037274          159 LIGITALQFPCGGLPVSRRQDL-DIMTKMLMKQPKST----------------SLQVAPNE--DTTHGTRTLSKNFWNMV  219 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~~~~~~~~~~li  219 (245)
                      |||+++|++++|..||...... +.............                ......+.  .........+..+.+++
T Consensus       189 slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  268 (291)
T cd07870         189 GAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLA  268 (291)
T ss_pred             HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHH
Confidence            9999999999999999764432 11111111110000                00000000  00000122367899999


Q ss_pred             HHhcCCCCCCCccHHHHhhcccc
Q 037274          220 KICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       220 ~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      .+|+..||.+|||+.+++.||||
T Consensus       269 ~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         269 SQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             HHHhCcCcccCcCHHHHhcCCCC
Confidence            99999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.3e-35  Score=230.05  Aligned_cols=208  Identities=22%  Similarity=0.340  Sum_probs=163.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+.+++.++|+||+++++.+...+..++++||+++++|.+++..                 ...+++..+.
T Consensus        40 ~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~  102 (264)
T cd06626          40 PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEH-----------------GRILDEHVIR  102 (264)
T ss_pred             hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhh-----------------cCCCChHHHH
Confidence            35788899999999999999999999999999999999999999999777652                 2347788899


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--------CCccccccccCceecCCC-CC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAAAPEVVNFGD-DY  150 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~-~~  150 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||.+.......        ...+++.|+|||.+.+.. ..
T Consensus       103 ~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~  182 (264)
T cd06626         103 VYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKG  182 (264)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCC
Confidence            99999999999999999999999999999986        55544332221        134578999999998622 23


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      .+.++||||||++++++++|..||...............   ......+       .....++.+.+++.+||+.+|.+|
T Consensus       183 ~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R  252 (264)
T cd06626         183 HGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---GHKPPIP-------DSLQLSPEGKDFLDRCLESDPKKR  252 (264)
T ss_pred             CCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---CCCCCCC-------cccccCHHHHHHHHHHccCCcccC
Confidence            789999999999999999999999764332222211111   1111111       113458889999999999999999


Q ss_pred             ccHHHHhhcccc
Q 037274          231 PAAEAQVLQEMW  242 (245)
Q Consensus       231 pt~~~~l~~~~f  242 (245)
                      ||+.+++.|||.
T Consensus       253 ~~~~~i~~~~~~  264 (264)
T cd06626         253 PTASELLQHPFV  264 (264)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=9e-36  Score=230.81  Aligned_cols=203  Identities=23%  Similarity=0.337  Sum_probs=164.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+..+.+++|+||+++++++..++..++++||+++++|.+++..                 ...+++..+..
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~  103 (264)
T cd06623          41 EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKK-----------------VGKIPEPVLAY  103 (264)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHH-----------------cCCCCHHHHHH
Confidence            5678899999999999999999999999999999999999999999777752                 25688999999


Q ss_pred             HHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.|+.|||+ .|++|+||+|+||+++.        ||.+.......    ...++..|+|||.+..  ..++.++
T Consensus       104 ~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--~~~~~~~  181 (264)
T cd06623         104 IARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQG--ESYSYAA  181 (264)
T ss_pred             HHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCC--CCCCchh
Confidence            99999999999999 99999999999999976        55444332222    2235788999999887  5688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCc---hHHHHHHHhcCCCCccCCCCCCCCCCCCccc-ccHHHHHHHHHhcCCCCCCCc
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQD---LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRT-LSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      |+||||+++|++++|..||.....   ......+....    ...         .... ++..+.+++..||..+|++||
T Consensus       182 Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~----~~~---------~~~~~~~~~l~~li~~~l~~~p~~R~  248 (264)
T cd06623         182 DIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGP----PPS---------LPAEEFSPEFRDFISACLQKDPKKRP  248 (264)
T ss_pred             hHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCC----CCC---------CCcccCCHHHHHHHHHHccCChhhCC
Confidence            999999999999999999987642   22222222111    100         1133 788999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      ++.++++|||++
T Consensus       249 ~~~~ll~~~~~~  260 (264)
T cd06623         249 SAAELLQHPFIK  260 (264)
T ss_pred             CHHHHHhCHHHH
Confidence            999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2.1e-36  Score=234.34  Aligned_cols=204  Identities=20%  Similarity=0.276  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++|+||+++++.+..++..++++|++++++|.+++..                 ...+++..+..
T Consensus        35 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~   97 (265)
T cd05579          35 NQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLEN-----------------VGSLDEDVARI   97 (265)
T ss_pred             hHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHH-----------------cCCCCHHHHHH
Confidence            4677899999999999999999999999999999999999999999777652                 23688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------------CCCccccccccCceecCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------------SSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~  148 (245)
                      ++.|++.||+|||+.|++|+||+|+||+++.        ||++......            ....++..|+|||....  
T Consensus        98 i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--  175 (265)
T cd05579          98 YIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILG--  175 (265)
T ss_pred             HHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcC--
Confidence            9999999999999999999999999999976        5554433222            12234778999999876  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ...+.++|+||||+++|++++|..||................   .  ..+.       ....+..+.+++.+||+.+|.
T Consensus       176 ~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~---~--~~~~-------~~~~~~~~~~~i~~~l~~~p~  243 (265)
T cd05579         176 QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK---I--EWPE-------DVEVSDEAIDLISKLLVPDPE  243 (265)
T ss_pred             CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---c--CCCc-------cccCCHHHHHHHHHHhcCCHh
Confidence            458899999999999999999999998766554443332211   0  1100       122588999999999999999


Q ss_pred             CCccH---HHHhhccccc
Q 037274          229 KRPAA---EAQVLQEMWH  243 (245)
Q Consensus       229 ~Rpt~---~~~l~~~~f~  243 (245)
                      +|||+   .++++||||.
T Consensus       244 ~Rpt~~~~~~~l~~~~~~  261 (265)
T cd05579         244 KRLGAKSIEEIKNHPFFK  261 (265)
T ss_pred             hcCCCccHHHHhcCcccc
Confidence            99999   9999999995

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1.1e-35  Score=231.09  Aligned_cols=212  Identities=18%  Similarity=0.301  Sum_probs=159.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+....+.+|+.+++.++|+||+++++.+...+..+++|||+++|+|.+++.....            ......++..+
T Consensus        35 ~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~  102 (269)
T cd05042          35 TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRG------------MVAQMAQKDVL  102 (269)
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccc------------cccccccHHHH
Confidence            345567789999999999999999999999999999999999999999887753210            01123467788


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCC-----
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFG-----  147 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~-----  147 (245)
                      ..++.|++.||+|||+.|++||||||+||+++.        ||.+......      ....+++.|+|||.+...     
T Consensus       103 ~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  182 (269)
T cd05042         103 QRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLL  182 (269)
T ss_pred             HHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhcccccc
Confidence            899999999999999999999999999999876        6665432111      112235679999987531     


Q ss_pred             CCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                      ...++.++||||||+++|+|++ |..||......+...........    ..+.+    .....+++.+.+++..|+ .|
T Consensus       183 ~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~~-~d  253 (269)
T cd05042         183 PKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDI----KLPKP----QLDLKYSDRWYEVMQFCW-LD  253 (269)
T ss_pred             ccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCc----cCCCC----cccccCCHHHHHHHHHHh-cC
Confidence            2356889999999999999998 78888876655544444332211    11111    112567888999999998 59


Q ss_pred             CCCCccHHHHhhc
Q 037274          227 PAKRPAAEAQVLQ  239 (245)
Q Consensus       227 p~~Rpt~~~~l~~  239 (245)
                      |.+|||++++++.
T Consensus       254 p~~Rpt~~~v~~~  266 (269)
T cd05042         254 PETRPTAEEVHEL  266 (269)
T ss_pred             cccccCHHHHHHH
Confidence            9999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=9.1e-36  Score=235.87  Aligned_cols=208  Identities=22%  Similarity=0.398  Sum_probs=164.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+++.+|+++++.++|+|++++++++..++..++|+||+. |++.+++..                ....+++..+
T Consensus        55 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----------------~~~~l~~~~~  117 (308)
T cd06634          55 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEV----------------HKKPLQEVEI  117 (308)
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHH----------------cCCCCCHHHH
Confidence            34556778899999999999999999999999999999999997 577554431                1245788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCccccccccCceecC-CCCCCCchhhH
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSITTWAAAPEVVNF-GDDYYSCKSDI  157 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~~Dv  157 (245)
                      ..++.|++.|+.|||+.+++|+||+|+||+++.        ||.+..........+++.|+|||.+.+ .....+.++||
T Consensus       118 ~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di  197 (308)
T cd06634         118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDV  197 (308)
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHHHhhcccCCCCcccch
Confidence            999999999999999999999999999999976        665554444444556889999999753 12447889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|++++|..||...+.............            .......++..+.++|++||+.+|.+||++++++
T Consensus       198 ~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll  265 (308)
T cd06634         198 WSLGITCIELAERKPPLFNMNAMSALYHIAQNES------------PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL  265 (308)
T ss_pred             HHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC------------CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHh
Confidence            9999999999999999977544433332222110            0011145778899999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      .|+|+.
T Consensus       266 ~~~~~~  271 (308)
T cd06634         266 KHRFVL  271 (308)
T ss_pred             hCcccc
Confidence            999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-35  Score=231.44  Aligned_cols=209  Identities=15%  Similarity=0.241  Sum_probs=162.7

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ......+.+|+++++.++|+||+++++++...+..++++||+++|+|.+++........       .......+++..+.
T Consensus        50 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~-------~~~~~~~~~~~~~~  122 (277)
T cd05032          50 MRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAE-------NNPGLGPPTLQKFI  122 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchh-------hccCCCCCCHHHHH
Confidence            35567789999999999999999999999999999999999999999888864221100       00123457888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||.+......      ....++..|+|||.+..  ..++.
T Consensus       123 ~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  200 (277)
T cd05032         123 QMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD--GVFTT  200 (277)
T ss_pred             HHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc--CCCCc
Confidence            99999999999999999999999999999986        5554432211      12234678999999876  55889


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|++++ |..||...+.....+......    ...         .+...+.++.+++.+||+.+|++|||
T Consensus       201 ~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~----~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt  267 (277)
T cd05032         201 KSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG----HLD---------LPENCPDKLLELMRMCWQYNPKMRPT  267 (277)
T ss_pred             ccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC----CCC---------CCCCCCHHHHHHHHHHcCCChhhCCC
Confidence            9999999999999998 899998766555544433111    000         11446889999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      +.+++.
T Consensus       268 ~~~l~~  273 (277)
T cd05032         268 FLEIVS  273 (277)
T ss_pred             HHHHHH
Confidence            999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-35  Score=228.72  Aligned_cols=197  Identities=19%  Similarity=0.301  Sum_probs=156.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++|+||+++++++. .+..++++||+.+++|.+++..                 ...+++..+..
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~   99 (257)
T cd05060          38 AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKK-----------------RREIPVSDLKE   99 (257)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHh-----------------CCCCCHHHHHH
Confidence            45678999999999999999999999875 4568999999999999777652                 23578999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC-------CccccccccCceecCCCCCCCc
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS-------SSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ++.|++.||.|||+.+++|+||||+||+++.        ||.+........       ..++..|+|||.+.+  ..++.
T Consensus       100 ~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  177 (257)
T cd05060         100 LAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY--GKFSS  177 (257)
T ss_pred             HHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcC--CCCCc
Confidence            9999999999999999999999999999876        555543322221       111357999999976  56889


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++|+||||+++|++++ |..||...+.......+....      ...       .+..++..+.+++.+||..+|++||+
T Consensus       178 ~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~l~~li~~cl~~~p~~Rp~  244 (257)
T cd05060         178 KSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE------RLP-------RPEECPQEIYSIMLSCWKYRPEDRPT  244 (257)
T ss_pred             cchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC------cCC-------CCCCCCHHHHHHHHHHhcCChhhCcC
Confidence            9999999999999997 999998766554444432221      111       11457789999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      +.++++
T Consensus       245 ~~~l~~  250 (257)
T cd05060         245 FSELES  250 (257)
T ss_pred             HHHHHH
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=8.8e-36  Score=238.67  Aligned_cols=212  Identities=17%  Similarity=0.244  Sum_probs=163.2

Q ss_pred             HHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHH
Q 037274           13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKE   92 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q   92 (245)
                      .+.+|+.++++++|+||+++++++..++..++++|++. |+|.+++..                 ...+++..+..++.|
T Consensus        66 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~-----------------~~~~~~~~~~~~~~q  127 (335)
T PTZ00024         66 TTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDR-----------------KIRLTESQVKCILLQ  127 (335)
T ss_pred             hHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHh-----------------cCCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999999997 588666542                 345788999999999


Q ss_pred             HHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------------------CCCCccccccccCceecC
Q 037274           93 TLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------------------SSSSSITTWAAAPEVVNF  146 (245)
Q Consensus        93 i~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------------------~~~~~~~~~y~aPE~~~~  146 (245)
                      ++.||++||+.|++|+||+|+||+++.        ||.+.....                  .....+++.|+|||.+.+
T Consensus       128 l~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  207 (335)
T PTZ00024        128 ILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG  207 (335)
T ss_pred             HHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhccc
Confidence            999999999999999999999999876        554433220                  011234778999999875


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCC--------------CCCCCCCccccc
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP--------------NEDTTHGTRTLS  212 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~  212 (245)
                       ...++.++|+||||+++|+|++|..||...+..+....+............+.              +..........+
T Consensus       208 -~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (335)
T PTZ00024        208 -AEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNAS  286 (335)
T ss_pred             -CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCC
Confidence             34578999999999999999999999998777666555443222111100000              000001113457


Q ss_pred             HHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          213 KNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       213 ~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..+.+++.+||+.+|.+|||+++++.||||+
T Consensus       287 ~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~  317 (335)
T PTZ00024        287 DDAIDLLQSLLKLNPLERISAKEALKHEYFK  317 (335)
T ss_pred             hHHHHHHHHHcCCCchhccCHHHHhcCcccC
Confidence            8899999999999999999999999999996

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=2.4e-35  Score=226.80  Aligned_cols=202  Identities=18%  Similarity=0.263  Sum_probs=160.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+....+.+|++++++++||||+++++++...+..++++||+++++|.+++..                ....+++..+
T Consensus        32 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~   95 (250)
T cd05085          32 PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRK----------------KKDELKTKQL   95 (250)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHh----------------cCCCCCHHHH
Confidence            344556799999999999999999999999999999999999999999766542                1235788999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ..++.|++.||.|+|++|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+  ..++.
T Consensus        96 ~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  173 (250)
T cd05085          96 VKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNY--GRYSS  173 (250)
T ss_pred             HHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhcc--CCCCc
Confidence            999999999999999999999999999999976        55543322111     1122567999999986  55889


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++|+||||+++|++++ |..||...........+.....      .       ..+..++..+.+++.+|++.+|++||+
T Consensus       174 ~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~  240 (250)
T cd05085         174 ESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR------M-------SCPQKCPDDVYKVMQRCWDYKPENRPK  240 (250)
T ss_pred             hhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC------C-------CCCCCCCHHHHHHHHHHcccCcccCCC
Confidence            9999999999999998 9999987665554444332210      0       111457889999999999999999999


Q ss_pred             HHHHhhc
Q 037274          233 AEAQVLQ  239 (245)
Q Consensus       233 ~~~~l~~  239 (245)
                      +.++++.
T Consensus       241 ~~~l~~~  247 (250)
T cd05085         241 FSELQKE  247 (250)
T ss_pred             HHHHHHH
Confidence            9998763

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.7e-35  Score=234.95  Aligned_cols=216  Identities=18%  Similarity=0.278  Sum_probs=163.8

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+....+.+|+++++++ +||||+++++++..++..++++||+.+|+|.+++............. ........+++..
T Consensus        57 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~-~~~~~~~~l~~~~  135 (314)
T cd05099          57 TDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFD-ITKVPEEQLSFKD  135 (314)
T ss_pred             ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCccccccc-ccCCcccccCHHH
Confidence            455677899999999999 59999999999988889999999999999999886432111100000 0111124588899


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..++.|++.||.|||++|++|+||||+||+++.        ||.++......      ...++..|+|||.+.+  ..+
T Consensus       136 ~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  213 (314)
T cd05099         136 LVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD--RVY  213 (314)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc--CCc
Confidence            9999999999999999999999999999999985        66665432211      1122457999999876  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|+||||+++|++++ |..||......+....+....      ..       ..+...+.++.+++.+||..+|++|
T Consensus       214 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~l~~li~~cl~~~p~~R  280 (314)
T cd05099         214 THQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGH------RM-------DKPSNCTHELYMLMRECWHAVPTQR  280 (314)
T ss_pred             CccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CC-------CCCCCCCHHHHHHHHHHcCCCcccC
Confidence            899999999999999998 889998765544444333211      00       1114567899999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      ||+.++++
T Consensus       281 ps~~~ll~  288 (314)
T cd05099         281 PTFKQLVE  288 (314)
T ss_pred             cCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1e-35  Score=229.73  Aligned_cols=202  Identities=19%  Similarity=0.304  Sum_probs=158.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEE-eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMI-SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .....+.+.+|+.++++++|+|++++++++. .++..++++||+++++|.+++..               .....+++..
T Consensus        39 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---------------~~~~~~~~~~  103 (256)
T cd05082          39 NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---------------RGRSVLGGDC  103 (256)
T ss_pred             CCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHh---------------cCCCCCCHHH
Confidence            3345667899999999999999999999764 45678999999999999776642               2234578899


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCchhh
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +..++.|++.||+|||++|++|+||||+||+++.        ||.+....... ....+..|+|||.+.+  ..++.++|
T Consensus       104 ~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  181 (256)
T cd05082         104 LLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE--KKFSTKSD  181 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHcc--CCCCchhh
Confidence            9999999999999999999999999999999976        66554332222 2223567999999876  56889999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||+++|+|++ |+.||...+.......+....    .  .       .....+++.+.+++.+|+..+|++|||+.+
T Consensus       182 v~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~----~--~-------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  248 (256)
T cd05082         182 VWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY----K--M-------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQ  248 (256)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC----C--C-------CCCCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence            9999999999997 999998755444433332211    0  0       111457889999999999999999999999


Q ss_pred             Hhh
Q 037274          236 QVL  238 (245)
Q Consensus       236 ~l~  238 (245)
                      +++
T Consensus       249 l~~  251 (256)
T cd05082         249 LRE  251 (256)
T ss_pred             HHH
Confidence            875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.6e-35  Score=234.16  Aligned_cols=216  Identities=17%  Similarity=0.253  Sum_probs=164.4

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+..+.+.+|+.+++.+ +||||+++++.+...+..++++||+.+|+|.+++............. ........+++..+
T Consensus        61 ~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~  139 (304)
T cd05101          61 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-IARVPDEQMTFKDL  139 (304)
T ss_pred             hHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccc-cccCCcccccHHHH
Confidence            45567899999999999 79999999999999999999999999999999887532211100000 00112345788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||.|||++|++|+||||+||+++.        ||.+......      ....+++.|+|||.+.+  ..++
T Consensus       140 ~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  217 (304)
T cd05101         140 VSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD--RVYT  217 (304)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc--CCCC
Confidence            999999999999999999999999999999975        6655433221      12233568999999976  5688


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|++++ |..||...+..+....+.....      .       ..+..++..+.+++.+||+.+|.+||
T Consensus       218 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~li~~cl~~~p~~Rp  284 (304)
T cd05101         218 HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR------M-------DKPANCTNELYMMMRDCWHAIPSHRP  284 (304)
T ss_pred             chhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc------C-------CCCCCCCHHHHHHHHHHcccChhhCC
Confidence            99999999999999998 7888877655544443322210      0       11145788999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |+.++++.
T Consensus       285 s~~e~l~~  292 (304)
T cd05101         285 TFKQLVED  292 (304)
T ss_pred             CHHHHHHH
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=8.8e-36  Score=236.11  Aligned_cols=214  Identities=18%  Similarity=0.291  Sum_probs=161.3

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+|+.++++++|+||+++++++...  +..++|+||+++ +|.+++..                ....+++..+..+
T Consensus        51 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~----------------~~~~l~~~~~~~~  113 (309)
T cd07845          51 ISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDN----------------MPTPFSESQVKCL  113 (309)
T ss_pred             chhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHh----------------cccCCCHHHHHHH
Confidence            3466899999999999999999998654  468999999975 78666642                1245889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||+|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.++|+
T Consensus       114 ~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv  192 (309)
T cd07845         114 MLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLG-CTTYTTAIDM  192 (309)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcC-CCCcCchHHH
Confidence            999999999999999999999999999976        5554433221    11223678999999864 3457899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCC--------------CCCCCCC--CCCcccccHHHHHHHHH
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQ--------------VAPNEDT--THGTRTLSKNFWNMVKI  221 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~--~~~~~~~~~~~~~li~~  221 (245)
                      ||||+++|+|++|..||...+.......+...........              .......  .......++.+.++|.+
T Consensus       193 wslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  272 (309)
T cd07845         193 WAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNF  272 (309)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHH
Confidence            9999999999999999998777666555544322111000              0000000  00012357889999999


Q ss_pred             hcCCCCCCCccHHHHhhccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ||+.||++|||+++++.||||.
T Consensus       273 ml~~dp~~R~t~~~il~h~~f~  294 (309)
T cd07845         273 LLMYDPKKRATAEEALESSYFK  294 (309)
T ss_pred             HhcCChhhCcCHHHHhcChhhc
Confidence            9999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.6e-35  Score=229.94  Aligned_cols=206  Identities=19%  Similarity=0.283  Sum_probs=160.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+....+.+|+.+++.++||||+++++++...+..++++||+++++|.+++...             ......+++..+
T Consensus        42 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~  108 (267)
T cd08228          42 DAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYF-------------KKQKRLIPERTV  108 (267)
T ss_pred             CHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHh-------------hhccCCCCHHHH
Confidence            3456677899999999999999999999999999999999999999998777421             112345788999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||.|||++|++|+||+|+||+++.        ||.+.......    ...+++.|+|||.+.+  ..++.+
T Consensus       109 ~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~  186 (267)
T cd08228         109 WKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE--NGYNFK  186 (267)
T ss_pred             HHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhcc--CCCCch
Confidence            999999999999999999999999999999975        55544332211    2345788999999986  568899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCch--HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDL--DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      +|+||||+++|+|++|+.||......  .....+ ...   ..    +    .......+..+.+++.+||..+|++||+
T Consensus       187 ~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~---~~----~----~~~~~~~~~~~~~li~~cl~~~p~~Rp~  254 (267)
T cd08228         187 SDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKI-EQC---DY----P----PLPTEHYSEKLRELVSMCIYPDPDQRPD  254 (267)
T ss_pred             hhHHHHHHHHHHHhcCCCCCccccccHHHHHHHH-hcC---CC----C----CCChhhcCHHHHHHHHHHCCCCcccCcC
Confidence            99999999999999999999764321  222211 111   00    0    0111456788999999999999999999


Q ss_pred             HHHHhhc
Q 037274          233 AEAQVLQ  239 (245)
Q Consensus       233 ~~~~l~~  239 (245)
                      +.++++.
T Consensus       255 ~~~vl~~  261 (267)
T cd08228         255 IGYVHQI  261 (267)
T ss_pred             HHHHHHH
Confidence            9999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.4e-35  Score=229.77  Aligned_cols=208  Identities=23%  Similarity=0.332  Sum_probs=165.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      .....+.+..|++++++++|+||+++++.+..  ....++++||+++++|.+++...             ......+++.
T Consensus        39 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~-------------~~~~~~l~~~  105 (265)
T cd08217          39 TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKC-------------KKERKYIEEE  105 (265)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHH-------------hhcccCCCHH
Confidence            34567789999999999999999999998754  34589999999999998877521             1124568899


Q ss_pred             HHHHHHHHHHHHHHHHH-----hCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCC
Q 037274           85 CLAIAHKETLKGLSYLQ-----GEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh-----~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~  147 (245)
                      .++.++.|++.||.+||     +.+++|+||+|+||+++.        ||.+.......    ...+++.|+|||.+.. 
T Consensus       106 ~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-  184 (265)
T cd08217         106 FIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNH-  184 (265)
T ss_pred             HHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcC-
Confidence            99999999999999999     899999999999999986        55444332222    2346889999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                       ..++.++|+||||+++++|++|..||...+.......+....       .      ...+...+..+.+++.+||+.+|
T Consensus       185 -~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~~l~~~~l~~~p  250 (265)
T cd08217         185 -MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK-------F------RRIPYRYSSELNEVIKSMLNVDP  250 (265)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC-------C------CCCccccCHHHHHHHHHHccCCc
Confidence             558899999999999999999999998866433333222111       0      01124578899999999999999


Q ss_pred             CCCccHHHHhhcccc
Q 037274          228 AKRPAAEAQVLQEMW  242 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~f  242 (245)
                      .+||++.++++|||.
T Consensus       251 ~~Rp~~~~il~~~~~  265 (265)
T cd08217         251 DKRPSTEELLQLPLI  265 (265)
T ss_pred             ccCCCHHHHhhCCCC
Confidence            999999999999983

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.5e-35  Score=229.34  Aligned_cols=199  Identities=19%  Similarity=0.302  Sum_probs=160.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+..|+++++.++|+||+++++++...+..++++||+++++|.+++..               .....+++..+..+
T Consensus        45 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---------------~~~~~~~~~~~~~~  109 (261)
T cd05148          45 KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRS---------------PEGQVLPVASLIDM  109 (261)
T ss_pred             hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhc---------------CCCCCCCHHHHHHH
Confidence            567799999999999999999999999999999999999999999777752               12345788999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||++|++|+||+|+||+++.        ||.+.......    ...++..|+|||.+..  ..++.++|+
T Consensus       110 ~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~Di  187 (261)
T cd05148         110 ACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASH--GTFSTKSDV  187 (261)
T ss_pred             HHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHcc--CCCCchhhH
Confidence            999999999999999999999999999976        55543322111    2233668999999876  568899999


Q ss_pred             HHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          158 WLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       158 wslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      ||||+++|++++ |..||......+.........      ..       ..+...++.+.+++.+||+.+|.+|||+.++
T Consensus       188 wslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l  254 (261)
T cd05148         188 WSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY------RM-------PCPAKCPQEIYKIMLECWAAEPEDRPSFKAL  254 (261)
T ss_pred             HHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC------cC-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence            999999999998 899998766555554443221      11       1125678899999999999999999999998


Q ss_pred             hh
Q 037274          237 VL  238 (245)
Q Consensus       237 l~  238 (245)
                      ++
T Consensus       255 ~~  256 (261)
T cd05148         255 RE  256 (261)
T ss_pred             HH
Confidence            75

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-36  Score=235.26  Aligned_cols=213  Identities=19%  Similarity=0.251  Sum_probs=156.6

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      ..+.+|++++++++|+||+++++++.+++..++|+||+.+ +|.+++..                ....+++..+..++.
T Consensus        48 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~----------------~~~~~~~~~~~~~~~  110 (291)
T cd07844          48 FTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDD----------------CGGGLSMHNVRLFLF  110 (291)
T ss_pred             hhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHh----------------CCCCCCHHHHHHHHH
Confidence            4567899999999999999999999999999999999985 88665542                123578899999999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhHHH
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      |++.||.|||+.|++|+||+|+||+++.        ||.+......    ....++..|+|||.+.+ ...++.++||||
T Consensus       111 ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~~Dv~s  189 (291)
T cd07844         111 QLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLG-STEYSTSLDMWG  189 (291)
T ss_pred             HHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhc-CcccCcHHHHHH
Confidence            9999999999999999999999999986        5554432211    11234778999999864 345788999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCCCccCC--------------C--CCCCCCCCCccccc--HHHHHHHH
Q 037274          160 IGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPKSTSLQ--------------V--APNEDTTHGTRTLS--KNFWNMVK  220 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~--------------~--~~~~~~~~~~~~~~--~~~~~li~  220 (245)
                      +|+++|+|++|..||..... .+....+...........              .  .............+  ..+.+++.
T Consensus       190 lG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  269 (291)
T cd07844         190 VGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELAL  269 (291)
T ss_pred             HHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHH
Confidence            99999999999999976552 222222211111000000              0  00000000001233  78899999


Q ss_pred             HhcCCCCCCCccHHHHhhcccc
Q 037274          221 ICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      +||+.+|.+|||+.++++||||
T Consensus       270 ~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         270 KFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             HHhccCcccccCHHHHhcCCCC
Confidence            9999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.2e-35  Score=236.10  Aligned_cols=201  Identities=17%  Similarity=0.278  Sum_probs=157.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.+++.++||||+++++++..+ ..+++++++.+|+|.+++..                ....+++..+
T Consensus        49 ~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~----------------~~~~~~~~~~  111 (316)
T cd05108          49 SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVRE----------------HKDNIGSQYL  111 (316)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHh----------------ccccCCHHHH
Confidence            345677899999999999999999999998764 57899999999999776652                1235778889


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||+|||+.|++||||||+||+++.        ||.+.......      ....+..|+|||.+..  ..++
T Consensus       112 ~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~--~~~~  189 (316)
T cd05108         112 LNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILH--RIYT  189 (316)
T ss_pred             HHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhcc--CCCC
Confidence            999999999999999999999999999999976        77665443222      1122567999999986  6689


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|++++ |..||.+....+... ......     ..+.       +..++.++.+++.+||+.+|.+||
T Consensus       190 ~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-~~~~~~-----~~~~-------~~~~~~~~~~li~~cl~~~p~~Rp  256 (316)
T cd05108         190 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGE-----RLPQ-------PPICTIDVYMIMVKCWMIDADSRP  256 (316)
T ss_pred             chhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHhCCC-----CCCC-------CCCCCHHHHHHHHHHccCChhhCc
Confidence            99999999999999987 999998755433322 222110     1111       144678899999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      ++.+++.+
T Consensus       257 s~~~l~~~  264 (316)
T cd05108         257 KFRELIIE  264 (316)
T ss_pred             CHHHHHHH
Confidence            99998875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.9e-35  Score=232.89  Aligned_cols=218  Identities=16%  Similarity=0.235  Sum_probs=162.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+++.+|+++++.++|+||+++++++..++..++++||+++++|.+++.........      .......+++..+
T Consensus        59 ~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~------~~~~~~~~~~~~~  132 (296)
T cd05095          59 NKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAA------EKADVVTISYSTL  132 (296)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCccccc------ccccccccCHHHH
Confidence            3445678999999999999999999999999999999999999999998888643221100      0111235788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||+|||+.|++|+||||+||+++.        ||.+.......      ....++.|+|||...+  ..++
T Consensus       133 ~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~  210 (296)
T cd05095         133 IFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL--GKFT  210 (296)
T ss_pred             HHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc--CCcc
Confidence            999999999999999999999999999999975        66655432211      1122567999998876  5589


Q ss_pred             chhhHHHHHHHHHHHhh--CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          153 CKSDIWLIGITALQFPC--GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      .++|+|||||++|+|++  |..||...+................. ...     ...+..+++.+.+++..||+.||.+|
T Consensus       211 ~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~li~~cl~~~p~~R  284 (296)
T cd05095         211 TASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGR-QVY-----LPKPALCPDSLYKLMLSCWRRNAKER  284 (296)
T ss_pred             chhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccc-ccc-----CCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            99999999999999998  77898775554443322111100000 000     01114467899999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      |++.++++
T Consensus       285 p~~~~i~~  292 (296)
T cd05095         285 PSFQEIHA  292 (296)
T ss_pred             CCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=8.7e-36  Score=233.33  Aligned_cols=209  Identities=16%  Similarity=0.234  Sum_probs=155.4

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ....+.+.+|++++++++||||+++++++...  ...+++|||+.+++|.+++.                  ...+++..
T Consensus        47 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------------------~~~l~~~~  108 (283)
T cd05080          47 QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLP------------------KHKLNLAQ  108 (283)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHH------------------HcCCCHHH
Confidence            34567889999999999999999999987653  35899999999999977664                  23588999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~  150 (245)
                      +..++.|++.||.|||++|++|+||||+||+++.        ||.+.......       ...++..|+|||.+.+  ..
T Consensus       109 ~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~  186 (283)
T cd05080         109 LLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKE--NK  186 (283)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcc--cC
Confidence            9999999999999999999999999999999976        66655432211       1233567999999876  56


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc-C---CCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS-L---QVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                      ++.++||||||+++|+|++|..||......  ............. .   ...........+..++.++.+++..||+.+
T Consensus       187 ~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  264 (283)
T cd05080         187 FSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETE  264 (283)
T ss_pred             CCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccC
Confidence            889999999999999999999998653321  1111100000000 0   000000111122557889999999999999


Q ss_pred             CCCCccHHHHhh
Q 037274          227 PAKRPAAEAQVL  238 (245)
Q Consensus       227 p~~Rpt~~~~l~  238 (245)
                      |++|||+++++.
T Consensus       265 p~~Rps~~~i~~  276 (283)
T cd05080         265 AKFRPTFRSLIP  276 (283)
T ss_pred             hhhCCCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.1e-35  Score=229.88  Aligned_cols=206  Identities=17%  Similarity=0.268  Sum_probs=161.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCce------eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ------LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ....+.+.+|+..++.++|+||+++++.+.....      .++++||+++|+|..++....           .......+
T Consensus        42 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~-----------~~~~~~~~  110 (273)
T cd05035          42 YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSR-----------LGGLPEKL  110 (273)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhh-----------ccCCcccC
Confidence            4456789999999999999999999998765443      799999999999987775311           11123468


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~  147 (245)
                      ++..+..++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ....+..|+|||.+.. 
T Consensus       111 ~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-  189 (273)
T cd05035         111 PLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD-  189 (273)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhccc-
Confidence            88999999999999999999999999999999999976        77665443222      1223568999999876 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ..++.++||||||+++|+|++ |..||.+...............      .       ..+..++..+.+++.+||+.|
T Consensus       190 -~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~li~~~l~~~  255 (273)
T cd05035         190 -RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNR------L-------KQPEDCLDELYDLMYSCWRAD  255 (273)
T ss_pred             -CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC------C-------CCCcCCCHHHHHHHHHHcCCC
Confidence             668899999999999999999 8899987665555444432210      0       111457889999999999999


Q ss_pred             CCCCccHHHHhhc
Q 037274          227 PAKRPAAEAQVLQ  239 (245)
Q Consensus       227 p~~Rpt~~~~l~~  239 (245)
                      |.+|||+.+++.+
T Consensus       256 p~~Rp~~~e~~~~  268 (273)
T cd05035         256 PKDRPTFTKLREV  268 (273)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=2.1e-35  Score=229.42  Aligned_cols=205  Identities=17%  Similarity=0.266  Sum_probs=159.3

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .....+.+|+++++.++||||+++++++...+..++++|++++++|.+++....          ........+++..+..
T Consensus        41 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~~~~~  110 (269)
T cd05044          41 QEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDAR----------VERFGPPLLTLKELLD  110 (269)
T ss_pred             hhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhh----------hcccCCccccHHHHHH
Confidence            456788999999999999999999999998889999999999999988875311          1110234578899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc-------------ccCccccccC------CCCccccccccCceecCCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI-------------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~  149 (245)
                      ++.|++.||+|||+.+++|+||+|+||+++.             ||.+......      ....++..|+|||.+.+  .
T Consensus       111 ~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~  188 (269)
T cd05044         111 ICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLD--G  188 (269)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHcc--C
Confidence            9999999999999999999999999999874             4433222111      11223678999999987  5


Q ss_pred             CCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      .++.++||||||+++|+|++ |..||...+..+....+....      ..       ......+..+.+++.+||..+|.
T Consensus       189 ~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~~p~  255 (269)
T cd05044         189 KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG------RL-------QKPENCPDKIYQLMTNCWAQDPS  255 (269)
T ss_pred             CcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC------cc-------CCcccchHHHHHHHHHHcCCCcc
Confidence            58999999999999999998 999998765544433322111      00       11145678999999999999999


Q ss_pred             CCccHHHHhh
Q 037274          229 KRPAAEAQVL  238 (245)
Q Consensus       229 ~Rpt~~~~l~  238 (245)
                      +||++.++++
T Consensus       256 ~Rp~~~~i~~  265 (269)
T cd05044         256 ERPTFDRIQE  265 (269)
T ss_pred             cCCCHHHHHH
Confidence            9999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-35  Score=227.49  Aligned_cols=199  Identities=21%  Similarity=0.314  Sum_probs=159.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+++.+|+.+++.++|+||+++++++...+..++++|++++++|.+++..               .....+++..+..+
T Consensus        43 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~---------------~~~~~~~~~~~~~~  107 (256)
T cd05039          43 AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRS---------------RGRAVITLAQQLGF  107 (256)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHh---------------cCCCCCCHHHHHHH
Confidence            577899999999999999999999999888899999999999999776652               12236889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC-CccccccccCceecCCCCCCCchhhHHHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS-SSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~-~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      +.|++.||.|||+.|++|+||||+||+++.        ||.+........ ...+..|+|||.+..  ..++.++|+|||
T Consensus       108 ~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~Di~sl  185 (256)
T cd05039         108 ALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALRE--KKFSTKSDVWSF  185 (256)
T ss_pred             HHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcC--CcCCcHHHHHHH
Confidence            999999999999999999999999999976        555444322221 222567999999876  558899999999


Q ss_pred             HHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          161 GITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       161 G~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      |++++++++ |..||................      ..       ..+...++.+.+++.+||..+|.+|||+.++++
T Consensus       186 G~il~~l~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         186 GILLWEIYSFGRVPYPRIPLKDVVPHVEKGY------RM-------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC------CC-------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            999999997 999998765544433332211      00       111456889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=2.7e-35  Score=229.21  Aligned_cols=207  Identities=17%  Similarity=0.293  Sum_probs=159.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      +....+.+.+|+.+++.++|+||+++++.+...      ...++++||+++|+|.+++....          . ......
T Consensus        40 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~----------~-~~~~~~  108 (272)
T cd05075          40 TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSR----------L-GDCPQY  108 (272)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhc----------c-cCCccc
Confidence            355678899999999999999999999987432      24789999999999977664211          0 111345


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNF  146 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~  146 (245)
                      +++..+..++.|++.||+|||++|++|+||||+||+++.        ||.+.......      ....++.|+|||...+
T Consensus       109 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  188 (272)
T cd05075         109 LPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD  188 (272)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccC
Confidence            789999999999999999999999999999999999875        77665443221      1223668999999986


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCC
Q 037274          147 GDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP  225 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  225 (245)
                        ..++.++|+||||+++|++++ |..||...........+....      ..       .....++..+.+++.+||+.
T Consensus       189 --~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~  253 (272)
T cd05075         189 --RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN------RL-------KQPPDCLDGLYSLMSSCWLL  253 (272)
T ss_pred             --CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC------CC-------CCCCCCCHHHHHHHHHHcCC
Confidence              668999999999999999999 789998755544444332211      00       01145678899999999999


Q ss_pred             CCCCCccHHHHhhc
Q 037274          226 DPAKRPAAEAQVLQ  239 (245)
Q Consensus       226 ~p~~Rpt~~~~l~~  239 (245)
                      +|.+|||++++++.
T Consensus       254 ~p~~Rps~~~l~~~  267 (272)
T cd05075         254 NPKDRPSFETLRCE  267 (272)
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=2.8e-35  Score=228.72  Aligned_cols=200  Identities=19%  Similarity=0.254  Sum_probs=160.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|++++++++|+||+++.+++...+..+++||++++++|.+++..                ....+++..+.
T Consensus        47 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~  110 (268)
T cd05063          47 EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRD----------------HDGEFSSYQLV  110 (268)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHh----------------cCCCCCHHHHH
Confidence            45567899999999999999999999999999999999999999999776642                12457888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC-------CccccccccCceecCCCCCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS-------SSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~-------~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      .++.|++.|+.|||+.|++|+||||+||+++.        ||.+........       ...++.|+|||.+..  ..++
T Consensus       111 ~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~  188 (268)
T cd05063         111 GMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY--RKFT  188 (268)
T ss_pred             HHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhc--CCcC
Confidence            99999999999999999999999999999876        665543322111       112456999999886  5588


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|+||||+++|++++ |..||...+.......+....      ..+.       ....+.++.+++.+||+.+|++||
T Consensus       189 ~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~------~~~~-------~~~~~~~~~~li~~c~~~~p~~Rp  255 (268)
T cd05063         189 SASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF------RLPA-------PMDCPSAVYQLMLQCWQQDRARRP  255 (268)
T ss_pred             hHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC------CCCC-------CCCCCHHHHHHHHHHcCCCcccCc
Confidence            99999999999999987 999998766555444443211      1111       145678999999999999999999


Q ss_pred             cHHHHhh
Q 037274          232 AAEAQVL  238 (245)
Q Consensus       232 t~~~~l~  238 (245)
                      ++.++++
T Consensus       256 ~~~~i~~  262 (268)
T cd05063         256 RFVDIVN  262 (268)
T ss_pred             CHHHHHH
Confidence            9999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=2.6e-35  Score=227.39  Aligned_cols=204  Identities=26%  Similarity=0.366  Sum_probs=163.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ...+.+.+|+.++++++|+||+++++.+...  +..++++|++++++|.+++..                 ...+++..+
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~  103 (260)
T cd06606          41 EELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKK-----------------FGKLPEPVI  103 (260)
T ss_pred             HHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHH-----------------cCCCCHHHH
Confidence            5678899999999999999999999999888  889999999999999777652                 236889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +.++.|++.||+|||+.|++|+||+|+||+++.        ||.+......      ....++..|+|||...+  ...+
T Consensus       104 ~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--~~~~  181 (260)
T cd06606         104 RKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG--EEYG  181 (260)
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcC--CCCC
Confidence            999999999999999999999999999999986        4443333222      22345889999999987  4589


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++|+||||++++++++|..||........  ..........         ....+...+..+.+++.+|++.+|.+||+
T Consensus       182 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~  250 (260)
T cd06606         182 RAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGSSGE---------PPEIPEHLSEEAKDFLRKCLRRDPKKRPT  250 (260)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccccCC---------CcCCCcccCHHHHHHHHHhCcCChhhCCC
Confidence            999999999999999999999987552211  1111110000         01112456889999999999999999999


Q ss_pred             HHHHhhcccc
Q 037274          233 AEAQVLQEMW  242 (245)
Q Consensus       233 ~~~~l~~~~f  242 (245)
                      +.++++||||
T Consensus       251 ~~~ll~~~~~  260 (260)
T cd06606         251 ADELLQHPFL  260 (260)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=2.2e-35  Score=229.38  Aligned_cols=202  Identities=21%  Similarity=0.286  Sum_probs=160.4

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+..|+.++++++||||+++++++..++..++++||+++++|.+++..                ....+++..+
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~  108 (269)
T cd05065          45 TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQ----------------NDGQFTVIQL  108 (269)
T ss_pred             CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhh----------------CCCCCCHHHH
Confidence            456678899999999999999999999999988999999999999999776652                1245788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC------Cc---cccccccCceecCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS------SS---ITTWAAAPEVVNFGDD  149 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~------~~---~~~~y~aPE~~~~~~~  149 (245)
                      ..++.|++.||+|||++|++|+||+|+||+++.        ||.+........      ..   .+..|+|||.+.+  .
T Consensus       109 ~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~  186 (269)
T cd05065         109 VGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY--R  186 (269)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhcc--C
Confidence            999999999999999999999999999999875        555433221110      01   1346999999986  5


Q ss_pred             CCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      .++.++||||||+++|++++ |..||...........+....      ..+.       +..++..+.+++.+||+.+|.
T Consensus       187 ~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~------~~~~-------~~~~~~~~~~li~~~l~~~p~  253 (269)
T cd05065         187 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY------RLPP-------PMDCPTALHQLMLDCWQKDRN  253 (269)
T ss_pred             cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC------cCCC-------cccCCHHHHHHHHHHcCCChh
Confidence            68899999999999999886 999998766555544442211      1111       145678899999999999999


Q ss_pred             CCccHHHHhhc
Q 037274          229 KRPAAEAQVLQ  239 (245)
Q Consensus       229 ~Rpt~~~~l~~  239 (245)
                      +||++++++..
T Consensus       254 ~Rp~~~~i~~~  264 (269)
T cd05065         254 ARPKFGQIVST  264 (269)
T ss_pred             hCcCHHHHHHH
Confidence            99999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-35  Score=226.90  Aligned_cols=202  Identities=25%  Similarity=0.359  Sum_probs=165.1

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++|+|++++++++.+++..++++|++++++|.+++..                 ...+++..+..
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-----------------~~~l~~~~~~~  103 (254)
T cd06627          41 EALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKK-----------------FGPFPESLVAV  103 (254)
T ss_pred             HHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHh-----------------ccCCCHHHHHH
Confidence            5678899999999999999999999999999999999999999999777652                 24688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.+||+.|++|+||+|+||+++.        ||.+.......    ...++..|+|||...+  ...+.++|
T Consensus       104 ~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--~~~~~~~D  181 (254)
T cd06627         104 YVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEM--SGASTASD  181 (254)
T ss_pred             HHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcC--CCCCcchh
Confidence            9999999999999999999999999999986        44444333222    2345788999999876  44889999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      +||||++++++++|..||................       .      ...+...++.+.+++.+||..+|++|||+.++
T Consensus       182 v~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~  248 (254)
T cd06627         182 IWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDD-------H------PPLPEGISPELKDFLMQCFQKDPNLRPTAKQL  248 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccC-------C------CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHH
Confidence            9999999999999999998755433333222111       0      01124568899999999999999999999999


Q ss_pred             hhcccc
Q 037274          237 VLQEMW  242 (245)
Q Consensus       237 l~~~~f  242 (245)
                      +.||||
T Consensus       249 l~~~~~  254 (254)
T cd06627         249 LKHPWI  254 (254)
T ss_pred             hcCCCC
Confidence            999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=2.7e-35  Score=229.60  Aligned_cols=208  Identities=17%  Similarity=0.266  Sum_probs=159.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++|+||+++++++...+..++++||+++|+|.+++.........        .....+++..+..+
T Consensus        51 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~--------~~~~~l~~~~~~~~  122 (275)
T cd05046          51 LQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEK--------LKPPPLSTKQKVAL  122 (275)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhccccccc--------ccccCCCHHHHHHH
Confidence            5678999999999999999999999998888999999999999998877632110000        01225889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-----CCCCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-----SSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||.|||++|++|+||||+||+++.        +|.+.....     .....+++.|+|||.+.+  ...+.++|
T Consensus       123 ~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~D  200 (275)
T cd05046         123 CTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE--DDFSTKSD  200 (275)
T ss_pred             HHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhcc--CCCCchhh
Confidence            999999999999999999999999999986        343322111     112233667999999876  45789999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||+++|++++ |..||.................     ..       .....++..+.+++.+||+.+|.+|||+.+
T Consensus       201 i~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~  268 (275)
T cd05046         201 VWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL-----EL-------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSE  268 (275)
T ss_pred             HHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCc-----CC-------CCCCCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence            9999999999998 7889976554444333321110     00       112457889999999999999999999999


Q ss_pred             Hhhc
Q 037274          236 QVLQ  239 (245)
Q Consensus       236 ~l~~  239 (245)
                      ++..
T Consensus       269 ~l~~  272 (275)
T cd05046         269 LVSA  272 (275)
T ss_pred             HHHH
Confidence            8864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.7e-35  Score=227.43  Aligned_cols=204  Identities=30%  Similarity=0.477  Sum_probs=164.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+..+++++|+||+++++.+..++..++++|++++++|.+++...                ...+++..+..
T Consensus        39 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~  102 (253)
T cd05122          39 EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKST----------------NQTLTESQIAY  102 (253)
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhc----------------CCCCCHHHHHH
Confidence            36788999999999999999999999999999999999999999997776521                14688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      ++.|++.||.+||+.|++|+||+|+||+++.        ||.+......   ....++..|+|||.+.+  ...+.++|+
T Consensus       103 i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~Dv  180 (253)
T cd05122         103 VCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVING--KPYDYKADI  180 (253)
T ss_pred             HHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcC--CCCCccccH
Confidence            9999999999999999999999999999986        5554444332   23445788999999987  448899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||++++++++|..||...+............    ....       .....++..+.+++.+||+.||.+|||+.+++
T Consensus       181 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l  249 (253)
T cd05122         181 WSLGITAIELAEGKPPYSELPPMKALFKIATNG----PPGL-------RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLL  249 (253)
T ss_pred             HHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcC----CCCc-------CcccccCHHHHHHHHHHccCChhhCCCHHHHh
Confidence            999999999999999998754433333222111    0000       01133478999999999999999999999999


Q ss_pred             hccc
Q 037274          238 LQEM  241 (245)
Q Consensus       238 ~~~~  241 (245)
                      +|||
T Consensus       250 ~~~~  253 (253)
T cd05122         250 KHPF  253 (253)
T ss_pred             cCCC
Confidence            9998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=2.2e-35  Score=228.32  Aligned_cols=199  Identities=18%  Similarity=0.287  Sum_probs=157.0

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++|+||+++++++. .+..+++|||+.+++|.+++..               .....+++..+..
T Consensus        43 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~---------------~~~~~~~~~~~~~  106 (260)
T cd05069          43 MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKE---------------GDGKYLKLPQLVD  106 (260)
T ss_pred             ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhh---------------CCCCCCCHHHHHH
Confidence            34567889999999999999999999874 5568999999999999776642               1234578889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||...+  ...+.++
T Consensus       107 ~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~--~~~~~~~  184 (260)
T cd05069         107 MAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--GRFTIKS  184 (260)
T ss_pred             HHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhcc--CCcChHH
Confidence            9999999999999999999999999999976        66554332211     1123567999999876  5588999


Q ss_pred             hHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      |+||||+++|++++ |..||.+....+....+.....      .+       .+...+..+.+++++||..+|.+||+++
T Consensus       185 Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~  251 (260)
T cd05069         185 DVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR------MP-------CPQGCPESLHELMKLCWKKDPDERPTFE  251 (260)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC------CC-------CCcccCHHHHHHHHHHccCCcccCcCHH
Confidence            99999999999999 8999988666555444332210      00       1145678999999999999999999999


Q ss_pred             HHhh
Q 037274          235 AQVL  238 (245)
Q Consensus       235 ~~l~  238 (245)
                      ++++
T Consensus       252 ~i~~  255 (260)
T cd05069         252 YIQS  255 (260)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1.4e-35  Score=229.44  Aligned_cols=199  Identities=18%  Similarity=0.345  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+++.+|+.++++++|+||+++++++ ..+..++++|++.+++|.+++..               .....+++..+..
T Consensus        43 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~---------------~~~~~~~~~~~~~  106 (260)
T cd05067          43 MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKT---------------PEGIKLTINKLID  106 (260)
T ss_pred             CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHh---------------cCCCCCCHHHHHH
Confidence            3456889999999999999999999886 45678999999999999766642               2234678889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.||+|||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+  ..++.++
T Consensus       107 i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--~~~~~~~  184 (260)
T cd05067         107 MAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY--GTFTIKS  184 (260)
T ss_pred             HHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhcc--CCcCccc
Confidence            9999999999999999999999999999976        55554332111     1223568999999986  5588999


Q ss_pred             hHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      |+||||+++|++++ |+.||.+.+............      ..+       .+...+.++.+++.+||..+|++||+++
T Consensus       185 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~  251 (260)
T cd05067         185 DVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY------RMP-------RPDNCPEELYELMRLCWKEKPEERPTFE  251 (260)
T ss_pred             chHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC------CCC-------CCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            99999999999998 999998766555444432211      111       1145678999999999999999999999


Q ss_pred             HHhh
Q 037274          235 AQVL  238 (245)
Q Consensus       235 ~~l~  238 (245)
                      +++.
T Consensus       252 ~l~~  255 (260)
T cd05067         252 YLRS  255 (260)
T ss_pred             HHHH
Confidence            9875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.4e-35  Score=231.30  Aligned_cols=219  Identities=16%  Similarity=0.217  Sum_probs=161.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|++++++++|+||+++++++...+..+++|||+.+++|.+++........     .........+++..+
T Consensus        57 ~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~-----~~~~~~~~~~~~~~~  131 (295)
T cd05097          57 TKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIEST-----FTHANNIPSVSIANL  131 (295)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhcccccc-----ccccccCCcccHHHH
Confidence            345567899999999999999999999999999999999999999999888853211000     000011234678899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +.++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ...+++.|+|||.+..  ..++
T Consensus       132 ~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  209 (295)
T cd05097         132 LYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL--GKFT  209 (295)
T ss_pred             HHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc--CCcC
Confidence            999999999999999999999999999999976        66554322211      1122568999999876  5589


Q ss_pred             chhhHHHHHHHHHHHhh--CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          153 CKSDIWLIGITALQFPC--GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      .++|+||||+++|+|++  +..||........................      .......++.+.+++.+||+.+|++|
T Consensus       210 ~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~R  283 (295)
T cd05097         210 TASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIY------LSQTPLCPSPVFKLMMRCWSRDIKDR  283 (295)
T ss_pred             chhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhcccccc------CCCCCCCCHHHHHHHHHHcCCCchhC
Confidence            99999999999999988  66788775554444333221110000000      01113467899999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      |+++++++
T Consensus       284 Ps~~~i~~  291 (295)
T cd05097         284 PTFNKIHH  291 (295)
T ss_pred             cCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=5.8e-36  Score=231.55  Aligned_cols=206  Identities=18%  Similarity=0.281  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ....++..|+.++++++||||+++++++.+.+..++++||+++++|.+++...             ......+++..++.
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-------------~~~~~~~~~~~~~~  110 (260)
T cd08222          44 NETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEEL-------------KHTGKTLSENQVCE  110 (260)
T ss_pred             chHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHH-------------hhcccccCHHHHHH
Confidence            34456778999999999999999999998888999999999999998777420             11235689999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc-------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI-------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.       ||.+......    ....+++.|+|||.+.+  ..++.++|+
T Consensus       111 ~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Dv  188 (260)
T cd08222         111 WFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKH--QGYDSKSDI  188 (260)
T ss_pred             HHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcccccCCCCCcCccCHHHHcc--CCCCchhhH
Confidence            9999999999999999999999999999875       5554433221    13345788999999876  557889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|++++|..||................         .+    ..+..++.++.++|.+||..+|.+||++.+++
T Consensus       189 ~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il  255 (260)
T cd08222         189 WSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGP---------TP----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEIL  255 (260)
T ss_pred             HHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC---------CC----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHh
Confidence            999999999999999997654443333322111         00    11256788999999999999999999999999


Q ss_pred             hcccc
Q 037274          238 LQEMW  242 (245)
Q Consensus       238 ~~~~f  242 (245)
                      +||||
T Consensus       256 ~~~~~  260 (260)
T cd08222         256 RNPFI  260 (260)
T ss_pred             hCCCC
Confidence            99997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=2e-35  Score=228.50  Aligned_cols=198  Identities=16%  Similarity=0.277  Sum_probs=156.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++|+||+++++++. .+..+++|||+.+++|.+++..               .....+++..+..+
T Consensus        44 ~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~---------------~~~~~~~~~~~~~~  107 (260)
T cd05070          44 SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKD---------------GEGRALKLPNLVDM  107 (260)
T ss_pred             CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHh---------------cCCCCCCHHHHHHH
Confidence            3467899999999999999999999875 4568999999999999777652               12345788999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||+|||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+  ..++.++|
T Consensus       108 ~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  185 (260)
T cd05070         108 AAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--GRFTIKSD  185 (260)
T ss_pred             HHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhc--CCCcchhh
Confidence            999999999999999999999999999876        55544322211     1122457999999876  55889999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      +||||+++|++++ |..||.+.+..+....+....      ..       ..+...+..+.+++.+|+..+|.+|||+++
T Consensus       186 i~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  252 (260)
T cd05070         186 VWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY------RM-------PCPQDCPISLHELMLQCWKKDPEERPTFEY  252 (260)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC------CC-------CCCCcCCHHHHHHHHHHcccCcccCcCHHH
Confidence            9999999999999 889998766555544433221      10       111456789999999999999999999998


Q ss_pred             Hhh
Q 037274          236 QVL  238 (245)
Q Consensus       236 ~l~  238 (245)
                      +..
T Consensus       253 l~~  255 (260)
T cd05070         253 LQS  255 (260)
T ss_pred             HHH
Confidence            864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1.6e-35  Score=238.69  Aligned_cols=214  Identities=17%  Similarity=0.255  Sum_probs=160.2

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      .+..+.+.+|+.++++++|+||+++++++...+      ..++|+||+.+ +|.+.+.                   ..+
T Consensus        56 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-------------------~~l  115 (353)
T cd07850          56 VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQ-------------------MDL  115 (353)
T ss_pred             hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHh-------------------hcC
Confidence            445667889999999999999999999886432      47999999975 7755443                   127


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ++..+..++.|++.||+|||+.|++|+||||+||+++.        ||.+.......   ...+++.|+|||.+.+  ..
T Consensus       116 ~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~  193 (353)
T cd07850         116 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--MG  193 (353)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhC--CC
Confidence            78888999999999999999999999999999999976        66665433221   2345788999999987  66


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc------------------------C-----CCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS------------------------L-----QVAPN  201 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------------~-----~~~~~  201 (245)
                      ++.++|||||||++|+|++|+.||...+.......+.........                        +     ....+
T Consensus       194 ~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (353)
T cd07850         194 YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFP  273 (353)
T ss_pred             CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccC
Confidence            899999999999999999999999876654444433222111000                        0     00000


Q ss_pred             CCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          202 EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       202 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..........++.+.+++.+||+.||.+|||+.+++.||||+
T Consensus       274 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         274 PDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             cccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence            000011234567889999999999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=3.2e-35  Score=228.27  Aligned_cols=201  Identities=21%  Similarity=0.297  Sum_probs=160.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.++++++||||+++++++..++..++++||+++++|.+++..                ....+++..+
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~  108 (267)
T cd05066          45 TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRK----------------HDGQFTVIQL  108 (267)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHh----------------cCCCCCHHHH
Confidence            355677899999999999999999999999989999999999999999776642                1235788899


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC-------CccccccccCceecCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS-------SSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~-------~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ..++.|++.||++||+.|++|+||||+||+++.        ||.+........       ...+..|+|||.+.+  ..+
T Consensus       109 ~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--~~~  186 (267)
T cd05066         109 VGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY--RKF  186 (267)
T ss_pred             HHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhcc--Ccc
Confidence            999999999999999999999999999999875        555543322111       112457999999986  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|+||||+++|++++ |..||......+....+....      ..+       .+...++.+.+++.+|++.+|.+|
T Consensus       187 ~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~li~~~l~~~p~~R  253 (267)
T cd05066         187 TSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY------RLP-------APMDCPAALHQLMLDCWQKDRNER  253 (267)
T ss_pred             CchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC------cCC-------CCCCCCHHHHHHHHHHcccCchhC
Confidence            999999999999999886 999998765554444433221      111       114568899999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      |++.++++
T Consensus       254 p~~~~i~~  261 (267)
T cd05066         254 PKFEQIVS  261 (267)
T ss_pred             CCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=2.5e-35  Score=227.33  Aligned_cols=207  Identities=21%  Similarity=0.264  Sum_probs=167.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+++++.++|+|++++.+.+..++..++++|++++++|.+++....             .....+++..+.
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~  106 (258)
T cd08215          40 EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQK-------------KEGKPFPEEQIL  106 (258)
T ss_pred             hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhh-------------ccCCCcCHHHHH
Confidence            3667789999999999999999999999999999999999999999977775311             123668999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.+++.||.+||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||...+  ..++.++
T Consensus       107 ~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--~~~~~~~  184 (258)
T cd08215         107 DWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQN--KPYNYKS  184 (258)
T ss_pred             HHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhcc--CCCCccc
Confidence            99999999999999999999999999999986        4444332222    12345788999999876  5588999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||+|+++++|++|..||...+.............       .      ..+...+..+.+++..||..+|.+|||+.+
T Consensus       185 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~  251 (258)
T cd08215         185 DIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY-------P------PIPSQYSSELRNLVSSLLQKDPEERPSIAQ  251 (258)
T ss_pred             cHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC-------C------CCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            999999999999999999987664444443322110       0      011357889999999999999999999999


Q ss_pred             Hhhcccc
Q 037274          236 QVLQEMW  242 (245)
Q Consensus       236 ~l~~~~f  242 (245)
                      +++||||
T Consensus       252 ll~~~~~  258 (258)
T cd08215         252 ILQSPFI  258 (258)
T ss_pred             HhcCCCC
Confidence            9999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=5.8e-36  Score=240.23  Aligned_cols=215  Identities=16%  Similarity=0.271  Sum_probs=160.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--------------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhh
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--------------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMS   74 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~   74 (245)
                      +..+.+.+|++++++++||||+++++.+...              ...++++||+++ +|.+++.               
T Consensus        44 ~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~---------------  107 (342)
T cd07854          44 QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVLE---------------  107 (342)
T ss_pred             chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccc-cHHHHHH---------------
Confidence            4567789999999999999999999876543              357899999974 8855443               


Q ss_pred             hccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC-------CCCcccccc
Q 037274           75 NRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS-------SSSSITTWA  138 (245)
Q Consensus        75 ~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~-------~~~~~~~~y  138 (245)
                         ...+++..++.++.|++.||.|||+.|++|+||||+||+++.         ||.+......       ....++..|
T Consensus       108 ---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y  184 (342)
T cd07854         108 ---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWY  184 (342)
T ss_pred             ---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccc
Confidence               235788999999999999999999999999999999999963         5554322111       122457789


Q ss_pred             ccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------CCCCC-C
Q 037274          139 AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------QVAPN-E  202 (245)
Q Consensus       139 ~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~-~  202 (245)
                      +|||.+.. ...++.++|+|||||++|+|++|+.||...+............+.....               ..... .
T Consensus       185 ~aPE~~~~-~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (342)
T cd07854         185 RSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRR  263 (342)
T ss_pred             cCHHHHhC-ccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCC
Confidence            99998754 3457889999999999999999999998876655554443332111000               00000 0


Q ss_pred             CCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          203 DTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       203 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .........+.++.+++.+||+.||.+|||+++++.||||+
T Consensus       264 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~  304 (342)
T cd07854         264 PLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS  304 (342)
T ss_pred             CHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence            00001134678899999999999999999999999999995

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2.8e-35  Score=230.99  Aligned_cols=217  Identities=16%  Similarity=0.271  Sum_probs=163.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhH-----HHHhhhccCCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAAT-----QLIMSNRHRYGI   81 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~-----~~~~~~~~~~~~   81 (245)
                      ..+..+.+.+|+.++++++||||+++++++..++..++++||+++|+|.+++...........     ...........+
T Consensus        48 ~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l  127 (288)
T cd05050          48 SADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPL  127 (288)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCcccccccccccccccccccccccc
Confidence            345567899999999999999999999999988899999999999999998864322111000     000011112457


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFG  147 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~  147 (245)
                      ++..++.++.|++.||.|||++|++|+||+|+||+++.        ||.+......      .....+..|+|||.+.+ 
T Consensus       128 ~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-  206 (288)
T cd05050         128 SCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-  206 (288)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-
Confidence            88999999999999999999999999999999999976        6655432211      11223567999999876 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ..++.++|||||||++|+|++ |..||.+.+..+....+....    ..         ..+...+.++.+++.+||+.+
T Consensus       207 -~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~----~~---------~~~~~~~~~l~~li~~~l~~~  272 (288)
T cd05050         207 -NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGN----VL---------SCPDNCPLELYNLMRLCWSKL  272 (288)
T ss_pred             -CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC----CC---------CCCCCCCHHHHHHHHHHcccC
Confidence             568999999999999999997 888998765555444332211    00         011446789999999999999


Q ss_pred             CCCCccHHHHhh
Q 037274          227 PAKRPAAEAQVL  238 (245)
Q Consensus       227 p~~Rpt~~~~l~  238 (245)
                      |.+|||+.++++
T Consensus       273 p~~Rpt~~el~~  284 (288)
T cd05050         273 PSDRPSFASINR  284 (288)
T ss_pred             cccCCCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=5.7e-35  Score=226.21  Aligned_cols=202  Identities=19%  Similarity=0.292  Sum_probs=154.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEE-eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMI-SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+..+.+.+|+.+++.++||||+++++++. .++..++++||+.+|+|.+++...                ....++..
T Consensus        36 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~   99 (262)
T cd05058          36 DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSE----------------THNPTVKD   99 (262)
T ss_pred             CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhc----------------CCCCCHHH
Confidence            3456778999999999999999999999765 455689999999999997777521                22356677


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--------CCccccccccCceecCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~  149 (245)
                      +..++.|++.||+|||+.+++|+||||+||+++.        ||.+.......        ...+++.|+|||.+.+  .
T Consensus       100 ~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~  177 (262)
T cd05058         100 LIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQT--Q  177 (262)
T ss_pred             HHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhcc--C
Confidence            7889999999999999999999999999999986        66554322111        1223668999999876  5


Q ss_pred             CCCchhhHHHHHHHHHHHhhC-CCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCG-GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      .++.++||||||+++|+|++| .+||...+............      ..       ......++.+.+++.+||+.+|+
T Consensus       178 ~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~cl~~~p~  244 (262)
T cd05058         178 KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR------RL-------LQPEYCPDPLYEVMLSCWHPKPE  244 (262)
T ss_pred             ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC------CC-------CCCCcCCHHHHHHHHHHcCCChh
Confidence            688999999999999999995 56666544444333322111      00       01134678899999999999999


Q ss_pred             CCccHHHHhhc
Q 037274          229 KRPAAEAQVLQ  239 (245)
Q Consensus       229 ~Rpt~~~~l~~  239 (245)
                      +||++.++++.
T Consensus       245 ~Rp~~~~il~~  255 (262)
T cd05058         245 MRPTFSELVSR  255 (262)
T ss_pred             hCCCHHHHHHH
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=1.7e-35  Score=232.92  Aligned_cols=219  Identities=19%  Similarity=0.220  Sum_probs=162.0

Q ss_pred             HHHHHHHHHHHhhCC-CCCeeeEEEEEEeCce-----eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274           11 YAKLAREIYRYKHLS-HPNIIPIYKTMISQRQ-----LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~-----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ...+.+|+.+++++. |+||+++++++...+.     .++++||+++ +|.+++....            ......+++.
T Consensus        44 ~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~------------~~~~~~~~~~  110 (295)
T cd07837          44 PPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNG------------RGPGRPLPAK  110 (295)
T ss_pred             chHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhc------------ccCCCCCCHH
Confidence            457888999999995 6999999999877655     8999999986 7876664210            0012457899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC----CCCccccccccCceecCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      .++.++.||+.||.|||+.|++|+||+|+||+++.         ||.+......    ....+++.|+|||.+.+ ...+
T Consensus       111 ~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~  189 (295)
T cd07837         111 TIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLG-STHY  189 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhC-CCCC
Confidence            99999999999999999999999999999999986         4444322111    11234778999998864 3457


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC--------------CCCCCCCCcccccHHHHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA--------------PNEDTTHGTRTLSKNFWN  217 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~  217 (245)
                      +.++|+||||+++|+|++|..||.+.+.......+............+              .+.........++.++.+
T Consensus       190 ~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (295)
T cd07837         190 STPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLD  269 (295)
T ss_pred             CchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHH
Confidence            899999999999999999999998876655554443322111100000              000001111357889999


Q ss_pred             HHHHhcCCCCCCCccHHHHhhccccc
Q 037274          218 MVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +|.+||.+||.+||++.+++.||||.
T Consensus       270 ~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         270 LLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHHHHccCChhhcCCHHHHhcCCCcC
Confidence            99999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=3.2e-35  Score=235.27  Aligned_cols=219  Identities=17%  Similarity=0.258  Sum_probs=161.9

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeC-ceeEEEeeecccCCHHHHHhcCCCCCh-hh---------------
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQ-RQLFYAEIACMIGSLDSIMTYRPLNSP-AA---------------   68 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~-~~---------------   68 (245)
                      ..+..+.+.+|+++++++ +|+||+++++++... ...++++||+++++|.+++........ ..               
T Consensus        50 ~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (337)
T cd05054          50 TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGK  129 (337)
T ss_pred             CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhcccccccccccccccccccccccc
Confidence            344567788999999999 799999999987654 568899999999999998864321100 00               


Q ss_pred             ----------------------------HHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-
Q 037274           69 ----------------------------TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-  119 (245)
Q Consensus        69 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-  119 (245)
                                                  ....-.......+++..+..++.|++.||.|||++|++||||||+||+++. 
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~  209 (337)
T cd05054         130 KQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN  209 (337)
T ss_pred             ccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC
Confidence                                        000000111246889999999999999999999999999999999999985 


Q ss_pred             -------ccCccccccCC------CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHH
Q 037274          120 -------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTK  185 (245)
Q Consensus       120 -------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~  185 (245)
                             ||++.......      ...++..|+|||.+.+  ..++.++|||||||++|++++ |..||.+....+....
T Consensus       210 ~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~  287 (337)
T cd05054         210 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFD--KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCR  287 (337)
T ss_pred             CcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcC--CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHH
Confidence                   67665432211      2233568999999987  668999999999999999997 9999977444333322


Q ss_pred             HHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          186 MLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ........            ..+...++++.+++.+||+.+|++||++++++++
T Consensus       288 ~~~~~~~~------------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         288 RLKEGTRM------------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             HHhccCCC------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            22221100            1114567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=5.1e-35  Score=231.56  Aligned_cols=217  Identities=17%  Similarity=0.248  Sum_probs=162.1

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+..+.+..|+.+++++ +|+||+++++++...+..++++||+++|+|.+++............... ......+++..
T Consensus        63 ~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~-~~~~~~l~~~~  141 (307)
T cd05098          63 TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPT-QVPEEQLSFKD  141 (307)
T ss_pred             ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccc-cCccccCCHHH
Confidence            345667789999999999 7999999999999999999999999999998888643211100000000 00123578899


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..++.|++.||+|||+.|++|+||||+||+++.        ||.+.......      ...+++.|+|||.+.+  ..+
T Consensus       142 ~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  219 (307)
T cd05098         142 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD--RIY  219 (307)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc--CCC
Confidence            9999999999999999999999999999999975        66554332111      1122468999999986  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|+||||+++|+|++ |..||......+.........      ..       ..+...+.++.+++.+||..+|.+|
T Consensus       220 ~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~~p~~R  286 (307)
T cd05098         220 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH------RM-------DKPSNCTNELYMMMRDCWHAVPSQR  286 (307)
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCC------CC-------CCCCcCCHHHHHHHHHHcccChhhC
Confidence            899999999999999998 888987655433333322111      00       1114568899999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      ||+.+++++
T Consensus       287 ps~~evl~~  295 (307)
T cd05098         287 PTFKQLVED  295 (307)
T ss_pred             cCHHHHHHH
Confidence            999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=3.9e-35  Score=234.80  Aligned_cols=217  Identities=17%  Similarity=0.247  Sum_probs=164.2

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+..+.+.+|+++++++ +||||+++++++..++..++++||+++|+|.+++.............. .......+++..
T Consensus        57 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~-~~~~~~~l~~~~  135 (334)
T cd05100          57 TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDT-CKLPEEQLTFKD  135 (334)
T ss_pred             CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCccccccccc-ccCccccCCHHH
Confidence            345677899999999999 799999999999988899999999999999988864321100000000 011234578889


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..++.|++.||+|||++|++|+||||+||+++.        ||.+.......      ...++..|+|||.+.+  ..+
T Consensus       136 ~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  213 (334)
T cd05100         136 LVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD--RVY  213 (334)
T ss_pred             HHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc--CCc
Confidence            9999999999999999999999999999999975        66554332211      1122467999999976  668


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|+|++ |..||...+..+....+.....      .       ..+...+.++.+++.+||+.+|.+|
T Consensus       214 ~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~l~~li~~cl~~~p~~R  280 (334)
T cd05100         214 THQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR------M-------DKPANCTHELYMIMRECWHAVPSQR  280 (334)
T ss_pred             CchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC------C-------CCCCCCCHHHHHHHHHHcccChhhC
Confidence            899999999999999998 8889987665554444332210      0       0114567899999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      |++.+++.+
T Consensus       281 ps~~ell~~  289 (334)
T cd05100         281 PTFKQLVED  289 (334)
T ss_pred             cCHHHHHHH
Confidence            999999865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=7.2e-35  Score=226.53  Aligned_cols=210  Identities=19%  Similarity=0.282  Sum_probs=156.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ......+.+|+.++++++||||+++++++.+....++||||+++|+|.+++.....            ......++..+.
T Consensus        36 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~~  103 (269)
T cd05087          36 VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRK------------AELMTPDPTTLQ  103 (269)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhh------------cccccccHHHHH
Confidence            34556789999999999999999999999988889999999999999887753110            012345677888


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCC-----
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGD-----  148 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~-----  148 (245)
                      .++.|++.|++|||+.|++|+||||+||+++.        ||.+.......      ...++..|+|||.+....     
T Consensus       104 ~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  183 (269)
T cd05087         104 RMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLV  183 (269)
T ss_pred             HHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccc
Confidence            89999999999999999999999999999985        66554322211      223467899999986411     


Q ss_pred             CCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++|+||||+++|+|++ |..||......+..........    .....+    ......++.+.+++++|+ .+|
T Consensus       184 ~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~l~~~c~-~~P  254 (269)
T cd05087         184 VDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQ----LKLPKP----RLKLPLSDRWYEVMQFCW-LQP  254 (269)
T ss_pred             cCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhccc----CCCCCC----ccCCCCChHHHHHHHHHh-cCc
Confidence            235789999999999999996 9999987555444333222111    111111    111356788999999998 689


Q ss_pred             CCCccHHHHhh
Q 037274          228 AKRPAAEAQVL  238 (245)
Q Consensus       228 ~~Rpt~~~~l~  238 (245)
                      ++|||+++++.
T Consensus       255 ~~Rpt~~~l~~  265 (269)
T cd05087         255 EQRPSAEEVHL  265 (269)
T ss_pred             ccCCCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4e-35  Score=227.10  Aligned_cols=198  Identities=16%  Similarity=0.267  Sum_probs=155.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++|+||+++++.+. ++..++++||+++|+|.+++..               .....+++..+..+
T Consensus        44 ~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~---------------~~~~~~~~~~~~~~  107 (262)
T cd05071          44 SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKG---------------EMGKYLRLPQLVDM  107 (262)
T ss_pred             CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhh---------------ccccCCCHHHHHHH
Confidence            3467899999999999999999999874 4568999999999999777752               11345788899999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||++||+.+++|+||||+||+++.        ||.+.......     ...++..|+|||....  ..++.++|
T Consensus       108 ~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~D  185 (262)
T cd05071         108 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--GRFTIKSD  185 (262)
T ss_pred             HHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhcc--CCCCchhh
Confidence            999999999999999999999999999876        55554332211     1223567999999876  55899999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      +||||+++|++++ |..||...........+....      ..       ......+..+.+++.+|++.+|.+||++.+
T Consensus       186 vwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~  252 (262)
T cd05071         186 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY------RM-------PCPPECPESLHDLMCQCWRKEPEERPTFEY  252 (262)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC------CC-------CCccccCHHHHHHHHHHccCCcccCCCHHH
Confidence            9999999999999 888998766555444332211      00       011457889999999999999999999999


Q ss_pred             Hhh
Q 037274          236 QVL  238 (245)
Q Consensus       236 ~l~  238 (245)
                      +++
T Consensus       253 ~~~  255 (262)
T cd05071         253 LQA  255 (262)
T ss_pred             HHH
Confidence            875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=4.1e-35  Score=226.06  Aligned_cols=200  Identities=19%  Similarity=0.283  Sum_probs=156.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.++++++||||+++++++..+ ..++++||+.+++|.+++..               .....+++..+.
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~---------------~~~~~~~~~~~~  103 (254)
T cd05083          40 DVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRT---------------RGRALVSVIQLL  103 (254)
T ss_pred             cchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHh---------------cCcCCCCHHHHH
Confidence            33456789999999999999999999988654 57999999999999776652               123457888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCchhhHH
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .++.|++.||.|||+.|++|+||||+||+++.        ||.+....... ....+..|+|||.+.+  ..++.++|+|
T Consensus       104 ~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~  181 (254)
T cd05083         104 QFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKH--KKFSSKSDVW  181 (254)
T ss_pred             HHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhcc--CCcCchhhHH
Confidence            99999999999999999999999999999976        55544332211 2223567999999876  5688999999


Q ss_pred             HHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          159 LIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       159 slG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      |||+++|+|++ |..||...........+....      ...       ....+++.+.+++.+||+.+|.+||++++++
T Consensus       182 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~  248 (254)
T cd05083         182 SYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY------RME-------PPEGCPADVYVLMTSCWETEPKKRPSFHKLR  248 (254)
T ss_pred             HHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC------CCC-------CCCcCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            99999999997 999998765544433332111      111       1145788999999999999999999999987


Q ss_pred             h
Q 037274          238 L  238 (245)
Q Consensus       238 ~  238 (245)
                      .
T Consensus       249 ~  249 (254)
T cd05083         249 E  249 (254)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=2.2e-35  Score=230.94  Aligned_cols=209  Identities=20%  Similarity=0.319  Sum_probs=158.5

Q ss_pred             HHHHHHHHHHHH-HhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYR-YKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~-l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +...++..|+.. ++.++||||+++++++..++..++++||++ |+|.+++...             ......+++..++
T Consensus        41 ~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-------------~~~~~~~~~~~~~  106 (283)
T cd06617          41 QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKV-------------YDKGLTIPEDILG  106 (283)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHh-------------ccCCCCCCHHHHH
Confidence            344556667664 677789999999999999999999999997 5887766421             1123568999999


Q ss_pred             HHHHHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCC--CCCCCc
Q 037274           88 IAHKETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFG--DDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~--~~~~~~  153 (245)
                      .++.|++.||.|||++ +++|+||||+||+++.        ||.+.......   ...++..|+|||.+.+.  ...++.
T Consensus       107 ~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  186 (283)
T cd06617         107 KIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDV  186 (283)
T ss_pred             HHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCc
Confidence            9999999999999997 9999999999999975        66654332211   23457889999988642  134688


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++|+||||+++|+|++|+.||..... ...........    ...        .....++.++.+++.+||..+|.+||+
T Consensus       187 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~--------~~~~~~~~~l~~li~~~l~~~p~~Rp~  254 (283)
T cd06617         187 KSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP----SPQ--------LPAEKFSPEFQDFVNKCLKKNYKERPN  254 (283)
T ss_pred             cccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC----CCC--------CCccccCHHHHHHHHHHccCChhhCcC
Confidence            99999999999999999999975322 22222222111    000        111347889999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      +++++.||||.
T Consensus       255 ~~~il~~~~~~  265 (283)
T cd06617         255 YPELLQHPFFE  265 (283)
T ss_pred             HHHHhcCchhh
Confidence            99999999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=3.8e-35  Score=229.12  Aligned_cols=196  Identities=14%  Similarity=0.101  Sum_probs=152.8

Q ss_pred             HHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHH
Q 037274           19 YRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLS   98 (245)
Q Consensus        19 ~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~   98 (245)
                      ..++...||+|+++++.+...+..++|+||+.+++|.+++..                 ...+++..+..++.|++.|+.
T Consensus        49 ~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~-----------------~~~l~~~~~~~~~~ql~~~l~  111 (278)
T cd05606          49 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-----------------HGVFSEAEMRFYAAEIILGLE  111 (278)
T ss_pred             HHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHH
Confidence            344556799999999999999999999999999999665532                 345889999999999999999


Q ss_pred             HHHhCCcccccCCCCceeccc--------ccCcccccc--CCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHh
Q 037274           99 YLQGEGLFHKNISAGHILHNI--------FNDDTRNWI--SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFP  168 (245)
Q Consensus        99 ~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~  168 (245)
                      |||+.+++|+||+|+||+++.        ||.+.....  .....++..|+|||.+.. ...++.++|+||+|+++|+|+
T Consensus       112 ~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~s~G~~l~~l~  190 (278)
T cd05606         112 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK-GVAYDSSADWFSLGCMLFKLL  190 (278)
T ss_pred             HHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcC-CCCCCcccchHhHHHHHHHHH
Confidence            999999999999999999865        666543321  123456899999999874 235789999999999999999


Q ss_pred             hCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----cHHHHhhccccc
Q 037274          169 CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----AAEAQVLQEMWH  243 (245)
Q Consensus       169 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~~l~~~~f~  243 (245)
                      +|+.||.................  .     .    ...+...+.++.+++.+||..+|.+||     ++.++++||||.
T Consensus       191 ~g~~p~~~~~~~~~~~~~~~~~~--~-----~----~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~  259 (278)
T cd05606         191 RGHSPFRQHKTKDKHEIDRMTLT--M-----A----VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFR  259 (278)
T ss_pred             hCCCCCCCCCccchHHHHHHhhc--c-----C----CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcccc
Confidence            99999987532222111111100  0     0    011134688999999999999999999     999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2e-36  Score=243.61  Aligned_cols=201  Identities=19%  Similarity=0.269  Sum_probs=169.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ...++.+|+++|+.|+|||||+++.+.+++..+|+||||+.+|.+.+++..                 .....+.....+
T Consensus        98 ~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~-----------------~gr~~e~~ar~~  160 (596)
T KOG0586|consen   98 KRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVK-----------------HGRMKEKEARAK  160 (596)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHh-----------------cccchhhhhhhh
Confidence            446689999999999999999999999999999999999999999777753                 344556788889


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCCchhhHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      +.|++.|++|||+++|||||||++|++++.        ||++.......   +.+|++.|+|||+..+ ....++.+|+|
T Consensus       161 F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g-~~y~gpe~D~W  239 (596)
T KOG0586|consen  161 FRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNG-KKYDGPEVDIW  239 (596)
T ss_pred             hHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccccccccCCCCCccChHhhcC-cccCCcceehh
Confidence            999999999999999999999999999886        88776655433   7788999999999997 55678999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      |+|+++|.++.|..||.+.+..+.........              ...+..++.++.++|+++|..+|.+|++.+++..
T Consensus       240 slgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk--------------~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  240 SLGVVLYALVEGSLPFDGQNLKELRPRVLRGK--------------YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             hhhhhheeeeecccccCCcccccccchheeee--------------ecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence            99999999999999999866554433322221              1112557889999999999999999999999999


Q ss_pred             cccc
Q 037274          239 QEMW  242 (245)
Q Consensus       239 ~~~f  242 (245)
                      |.|-
T Consensus       306 ~~W~  309 (596)
T KOG0586|consen  306 DRWR  309 (596)
T ss_pred             hccc
Confidence            9984

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=7e-35  Score=224.31  Aligned_cols=199  Identities=20%  Similarity=0.311  Sum_probs=158.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|++++++++|+||+++++++...+..++++|++.+++|.+++..                ....+++..+..
T Consensus        34 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~----------------~~~~~~~~~~~~   97 (251)
T cd05041          34 DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRK----------------KKNRLTVKKLLQ   97 (251)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHh----------------cCCCCCHHHHHH
Confidence            4677899999999999999999999999999999999999999999776642                123577888999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCch
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ++.+++.||.|||+++++|+||+|+||+++.        ||.+.......      ....+..|+|||.+.+  ..++.+
T Consensus        98 ~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~  175 (251)
T cd05041          98 MSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNY--GRYTSE  175 (251)
T ss_pred             HHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhcc--CCCCcc
Confidence            9999999999999999999999999999976        66554332111      1122556999999876  558899


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +|+||||+++|++++ |..||...........+....      ...       .+...+.++.+++.+||..+|.+|||+
T Consensus       176 ~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~  242 (251)
T cd05041         176 SDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY------RMP-------APQLCPEEIYRLMLQCWAYDPENRPSF  242 (251)
T ss_pred             hhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC------CCC-------CCccCCHHHHHHHHHHhccChhhCcCH
Confidence            999999999999998 888987765544433332111      111       114578899999999999999999999


Q ss_pred             HHHhh
Q 037274          234 EAQVL  238 (245)
Q Consensus       234 ~~~l~  238 (245)
                      +++++
T Consensus       243 ~ell~  247 (251)
T cd05041         243 SEIYN  247 (251)
T ss_pred             HHHHH
Confidence            99986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.2e-35  Score=227.45  Aligned_cols=201  Identities=17%  Similarity=0.303  Sum_probs=160.7

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+++.+|+.++++++|+||+++++++..++..++++|++++++|.+++..               .....+++..+.
T Consensus        42 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~---------------~~~~~~~~~~~~  106 (261)
T cd05034          42 TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKS---------------GEGKKLRLPQLV  106 (261)
T ss_pred             ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhc---------------cccCCCCHHHHH
Confidence            34457799999999999999999999999888899999999999999776652               123457889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|++.|+.|||++|++|+||+|+||+++.        ||.+.......     ....+..|+|||.+.+  ...+.+
T Consensus       107 ~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~  184 (261)
T cd05034         107 DMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANY--GRFTIK  184 (261)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhcc--CCcCch
Confidence            99999999999999999999999999999976        55443322111     1122467999999986  568899


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +|+||||+++|++++ |+.||.+.........+....      ..+.       +...+.++.+++.+||+.+|.+||++
T Consensus       185 ~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~~~i~~~l~~~p~~Rp~~  251 (261)
T cd05034         185 SDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY------RMPR-------PPNCPEELYDLMLQCWDKDPEERPTF  251 (261)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CCCC-------CCCCCHHHHHHHHHHcccCcccCCCH
Confidence            999999999999998 999998766655555543322      1111       13457899999999999999999999


Q ss_pred             HHHhh
Q 037274          234 EAQVL  238 (245)
Q Consensus       234 ~~~l~  238 (245)
                      +++++
T Consensus       252 ~~l~~  256 (261)
T cd05034         252 EYLQS  256 (261)
T ss_pred             HHHHH
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=3.9e-35  Score=227.72  Aligned_cols=206  Identities=20%  Similarity=0.261  Sum_probs=158.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.+++.++|+||+++++++..++..++++|++++++|.+++...             ......+++..++
T Consensus        43 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~  109 (267)
T cd08229          43 AKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHF-------------KKQKRLIPEKTVW  109 (267)
T ss_pred             HHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHh-------------hccCCCCCHHHHH
Confidence            345578899999999999999999999999999999999999999998777521             1123468899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||++|++|+||+|+||+++.        ||.+......    ....++..|+|||.+.+  ..++.++
T Consensus       110 ~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~  187 (267)
T cd08229         110 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE--NGYNFKS  187 (267)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcC--CCccchh
Confidence            99999999999999999999999999999875        5544332211    12356889999999976  5688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||||+++|+|++|..||.......  ..........   .     .........++++.+++.+||..+|.+|||+.+
T Consensus       188 Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~---~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  257 (267)
T cd08229         188 DIWSLGCLLYEMAALQSPFYGDKMNL--YSLCKKIEQC---D-----YPPLPSDHYSEELRQLVNMCINPDPEKRPDITY  257 (267)
T ss_pred             hHHHHHHHHHHHHhCCCCcccccchH--HHHhhhhhcC---C-----CCCCCcccccHHHHHHHHHhcCCCcccCCCHHH
Confidence            99999999999999999997643211  1111111000   0     001111457889999999999999999999998


Q ss_pred             Hhh
Q 037274          236 QVL  238 (245)
Q Consensus       236 ~l~  238 (245)
                      +++
T Consensus       258 i~~  260 (267)
T cd08229         258 VYD  260 (267)
T ss_pred             HHH
Confidence            765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-35  Score=232.02  Aligned_cols=216  Identities=20%  Similarity=0.260  Sum_probs=165.4

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++|+||+++++++..++..++++||+++ +|.+++..                ....+++..+..
T Consensus        40 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~----------------~~~~~~~~~~~~  102 (283)
T cd05118          40 GIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKD----------------RQRGLPESLIKS  102 (283)
T ss_pred             hhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHh----------------hcccCCHHHHHH
Confidence            3567888999999999999999999999999999999999985 78555532                124688899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||+.+++|+||+|+||+++.        ||.+.......    ...++..|+|||.+.+ ...++.++|
T Consensus       103 ~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~~D  181 (283)
T cd05118         103 YLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLG-DKGYSTPVD  181 (283)
T ss_pred             HHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhc-CCCCCchhH
Confidence            9999999999999999999999999999986        44443332221    2335778999999875 336889999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCC----------------CCCCCCCcccccHHHHHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP----------------NEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~li~  220 (245)
                      +||||+++|++++|+.||...+..+...................                ...........+.++.++|.
T Consensus       182 i~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  261 (283)
T cd05118         182 IWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLS  261 (283)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHH
Confidence            99999999999999999988776655544433322111000000                00000111346789999999


Q ss_pred             HhcCCCCCCCccHHHHhhcccc
Q 037274          221 ICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      +||++||.+||++.++++||||
T Consensus       262 ~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         262 QMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             HHhccCcccCcCHHHHhhCCCC
Confidence            9999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=4.4e-35  Score=229.58  Aligned_cols=216  Identities=20%  Similarity=0.281  Sum_probs=163.9

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ...+.+.+|++++++++|+|++++++++...  +..++|+||+++ +|.+++..                ....+++..+
T Consensus        40 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----------------~~~~~~~~~~  102 (287)
T cd07840          40 GFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDS----------------PEVKFTESQI  102 (287)
T ss_pred             cchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhc----------------cCCCCCHHHH
Confidence            3456788999999999999999999999887  789999999985 88665542                1246889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +.++.|++.||++||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+ ...++.
T Consensus       103 ~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~  181 (287)
T cd07840         103 KCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLG-ATRYGP  181 (287)
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEc-cccCCh
Confidence            999999999999999999999999999999986        55554333322     2234778999998764 345789


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCC-----------CC------CCCCcccccHHHH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPN-----------ED------TTHGTRTLSKNFW  216 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~------~~~~~~~~~~~~~  216 (245)
                      ++||||||+++|+|++|+.||...+.......+............+..           ..      .......++..+.
T Consensus       182 ~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (287)
T cd07840         182 EVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSAL  261 (287)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHH
Confidence            999999999999999999999887765555544432211100000000           00      0001112378899


Q ss_pred             HHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          217 NMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       217 ~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      +++.+||+.+|.+||++.+++.||||
T Consensus       262 ~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         262 DLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             HHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            99999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=4.6e-35  Score=225.99  Aligned_cols=198  Identities=19%  Similarity=0.331  Sum_probs=157.6

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+++.+|++++++++||||+++++++......++++||+++++|.+++..                ....+++..+..++
T Consensus        43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~~  106 (256)
T cd05112          43 EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRA----------------QRGKFSQETLLGMC  106 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHh----------------CccCCCHHHHHHHH
Confidence            45788999999999999999999999988899999999999999776642                12357888899999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchhhH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      .|++.|+++||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+  ..++.++|+
T Consensus       107 ~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~--~~~~~~~Dv  184 (256)
T cd05112         107 LDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSF--SKYSSKSDV  184 (256)
T ss_pred             HHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhcc--CCcChHHHH
Confidence            99999999999999999999999999975        55443222111     1123568999999986  568899999


Q ss_pred             HHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          158 WLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       158 wslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      ||||+++|++++ |..||...........+....      ...       .+...+..+.+++.+||+.+|++|||+.++
T Consensus       185 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~  251 (256)
T cd05112         185 WSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF------RLY-------KPRLASQSVYELMQHCWKERPEDRPSFSLL  251 (256)
T ss_pred             HHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC------CCC-------CCCCCCHHHHHHHHHHcccChhhCCCHHHH
Confidence            999999999998 899998766555444432211      100       113467899999999999999999999999


Q ss_pred             hhc
Q 037274          237 VLQ  239 (245)
Q Consensus       237 l~~  239 (245)
                      ++.
T Consensus       252 l~~  254 (256)
T cd05112         252 LHQ  254 (256)
T ss_pred             HHh
Confidence            864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-35  Score=235.44  Aligned_cols=219  Identities=16%  Similarity=0.225  Sum_probs=158.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ..+.+.+|+.++++++||||+++++++...  +..++|+|++++ ++.+++...            .......+++..++
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~------------~~~~~~~~~~~~~~  111 (316)
T cd07842          45 ISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFH------------RQAKRVSIPPSMVK  111 (316)
T ss_pred             ccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhh------------ccCCCcCcCHHHHH
Confidence            346678899999999999999999999887  789999999986 665555321            11112468899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc------------ccCccccccC-------CCCccccccccCceecCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWIS-------SSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~  148 (245)
                      .++.|++.||.|||+.+++|+||||+||+++.            ||.+......       ....+++.|+|||.+.+ .
T Consensus       112 ~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~  190 (316)
T cd07842         112 SLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLG-A  190 (316)
T ss_pred             HHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhC-C
Confidence            99999999999999999999999999999965            5554432211       12244788999998864 3


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchH---------HHHHHHhcCCCC--------------cc----CCCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLD---------IMTKMLMKQPKS--------------TS----LQVAPN  201 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~---------~~~~~~~~~~~~--------------~~----~~~~~~  201 (245)
                      ..++.++|+||||+++++|++|..||.......         .+..++......              ..    ......
T Consensus       191 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (316)
T cd07842         191 RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTY  270 (316)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCC
Confidence            457899999999999999999999997654322         111111111000              00    000000


Q ss_pred             C---CCCCCc--ccccHHHHHHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          202 E---DTTHGT--RTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       202 ~---~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      .   ......  ...+.++.+++.+||+.||++|||+.+++.||||
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         271 PSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             CCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            0   000000  1567789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=6.2e-35  Score=226.99  Aligned_cols=200  Identities=20%  Similarity=0.383  Sum_probs=157.6

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|++++++++||||+++++++.+ +..++++|++++++|.+++..                ....+++..+.
T Consensus        48 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~  110 (270)
T cd05056          48 PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQV----------------NKYSLDLASLI  110 (270)
T ss_pred             HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHh----------------CCCCCCHHHHH
Confidence            5567789999999999999999999998865 557899999999999777752                12357889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||.+.......     ...+++.|+|||.+..  ..++.+
T Consensus       111 ~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  188 (270)
T cd05056         111 LYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINF--RRFTSA  188 (270)
T ss_pred             HHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhcc--CCCCch
Confidence            99999999999999999999999999999976        55543322211     1122467999999876  568899


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +||||||+++|++++ |..||......+....+....      ...       .+..++..+.+++.+|+..+|.+|||+
T Consensus       189 ~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~li~~~l~~~P~~Rpt~  255 (270)
T cd05056         189 SDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE------RLP-------MPPNCPPTLYSLMTKCWAYDPSKRPRF  255 (270)
T ss_pred             hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC------cCC-------CCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            999999999999886 999998766554443332211      111       114578899999999999999999999


Q ss_pred             HHHhhc
Q 037274          234 EAQVLQ  239 (245)
Q Consensus       234 ~~~l~~  239 (245)
                      .+++..
T Consensus       256 ~~~~~~  261 (270)
T cd05056         256 TELKAQ  261 (270)
T ss_pred             HHHHHH
Confidence            998753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-35  Score=237.21  Aligned_cols=217  Identities=16%  Similarity=0.226  Sum_probs=159.3

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC-----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ-----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ......+.+|+.++++++|+||+++++++...     ...++++|++.+ +|.+++.                  ...++
T Consensus        44 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~------------------~~~l~  104 (336)
T cd07849          44 QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIK------------------TQHLS  104 (336)
T ss_pred             chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc-CHHHHHh------------------cCCCC
Confidence            34566788999999999999999999887543     347999999975 7755443                  24588


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~  147 (245)
                      +..+..++.|++.||.+||+.|++|+||||+||+++.        ||++.......       ...+++.|+|||.+.+ 
T Consensus       105 ~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-  183 (336)
T cd07849         105 NDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLN-  183 (336)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhC-
Confidence            8999999999999999999999999999999999876        66554332211       2345788999998754 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc---------------CCCCCCCCC--CCCccc
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS---------------LQVAPNEDT--THGTRT  210 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~  210 (245)
                      ...++.++||||||+++|+|++|+.||.+.+.................               ...+.....  ......
T Consensus       184 ~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (336)
T cd07849         184 SKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPN  263 (336)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcc
Confidence            345789999999999999999999999875544333322221110000               000000000  000123


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhcccccc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHF  244 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~~  244 (245)
                      .++++.+++.+||+.+|++|||+.++++||||..
T Consensus       264 ~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~  297 (336)
T cd07849         264 ADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ  297 (336)
T ss_pred             cCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence            5788999999999999999999999999999864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=6.2e-35  Score=228.17  Aligned_cols=208  Identities=20%  Similarity=0.249  Sum_probs=161.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe-CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS-QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .....+.+.+|+.++++++|+||+++++++.. +...+++++++++++|.+++.......         ......+++..
T Consensus        48 ~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~---------~~~~~~l~~~~  118 (280)
T cd05043          48 SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGE---------ANNPQALSTQQ  118 (280)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccc---------cccccCCCHHH
Confidence            45567889999999999999999999998765 467899999999999988876422110         01125688999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ++.++.|++.||+|||+.+++|+||||+||+++.        ||+++......      ...++..|+|||.+.+  ..+
T Consensus       119 ~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~--~~~  196 (280)
T cd05043         119 LVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN--KEY  196 (280)
T ss_pred             HHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhc--CCC
Confidence            9999999999999999999999999999999976        66655332211      2233667999999976  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|++++ |..||...+..+.........      ..       .....+++++.+++.+||..+|++|
T Consensus       197 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~li~~~l~~~p~~R  263 (280)
T cd05043         197 SSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY------RL-------AQPINCPDELFAVMACCWALDPEER  263 (280)
T ss_pred             CchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC------CC-------CCCCcCCHHHHHHHHHHcCCChhhC
Confidence            999999999999999998 999998765544443332211      10       0114467899999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      ||+.+++.
T Consensus       264 ps~~~~~~  271 (280)
T cd05043         264 PSFSQLVQ  271 (280)
T ss_pred             CCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-35  Score=226.39  Aligned_cols=201  Identities=19%  Similarity=0.228  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+..|+.++++++|+||+++++.+..++..++++|++.+++|.+++..                 ...+++..+..
T Consensus        35 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~   97 (250)
T cd05123          35 KEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSK-----------------EGRFSEERARF   97 (250)
T ss_pred             HHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHh-----------------cCCCCHHHHHH
Confidence            4667899999999999999999999999999999999999999999776652                 23578899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.|+.++|+.+++|+||+|+||+++.        ||.+.....    .....++..|+|||...+  ...+.++|
T Consensus        98 ~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--~~~~~~~D  175 (250)
T cd05123          98 YAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLG--KGYGKAVD  175 (250)
T ss_pred             HHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCC--CCCCchhh
Confidence            9999999999999999999999999999886        554443322    123345788999999986  55789999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH---
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA---  233 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~---  233 (245)
                      +||||+++|++++|..||...+...........       ..       ..+...+..+.+++.+||..||.+||++   
T Consensus       176 ~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-------~~-------~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~  241 (250)
T cd05123         176 WWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD-------PL-------RFPEFLSPEARDLISGLLQKDPTKRLGSGGA  241 (250)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-------CC-------CCCCCCCHHHHHHHHHHhcCCHhhCCCcccH
Confidence            999999999999999999876543333333221       11       1114458899999999999999999999   


Q ss_pred             HHHhhcccc
Q 037274          234 EAQVLQEMW  242 (245)
Q Consensus       234 ~~~l~~~~f  242 (245)
                      +++++||||
T Consensus       242 ~~l~~~~~f  250 (250)
T cd05123         242 EEIKAHPFF  250 (250)
T ss_pred             HHHHhCCCC
Confidence            999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=3.7e-35  Score=232.59  Aligned_cols=214  Identities=17%  Similarity=0.245  Sum_probs=154.7

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCc--------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQR--------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ...+.+|++++++++||||+++++++...+        ..++++||+.+ +|.+++..                ....++
T Consensus        55 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~----------------~~~~~~  117 (310)
T cd07865          55 PITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSN----------------KNVKFT  117 (310)
T ss_pred             hhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHh----------------cccCCC
Confidence            345678999999999999999999886543        35999999975 77555432                123588


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--------CCccccccccCceecC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAAAPEVVNF  146 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~aPE~~~~  146 (245)
                      +..++.++.|++.||+|||++|++|+||+|+||+++.        ||.+.......        ...++..|+|||.+.+
T Consensus       118 ~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  197 (310)
T cd07865         118 LSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLG  197 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcC
Confidence            9999999999999999999999999999999999986        55544332211        1234678999998864


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcC---CCCccC-----------CCCCCC----CCCCCc
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQ---PKSTSL-----------QVAPNE----DTTHGT  208 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~-----------~~~~~~----~~~~~~  208 (245)
                       ...++.++|+||||+++|+|++|..||...+.......+....   ......           ..+...    ......
T Consensus       198 -~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  276 (310)
T cd07865         198 -ERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKP  276 (310)
T ss_pred             -CcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhccc
Confidence             3346889999999999999999999998765543332222111   000000           000000    000001


Q ss_pred             ccccHHHHHHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          209 RTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       209 ~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      ...+..+.++|.+||..||.+|||++++++||||
T Consensus       277 ~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         277 YVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             ccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            2235678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=7.5e-35  Score=225.09  Aligned_cols=196  Identities=19%  Similarity=0.243  Sum_probs=152.9

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ...+.+|+.++++++||||+++++++.. +..++++||+++|+|.+++...                ...+++..+..++
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~~~~~~~  107 (259)
T cd05037          45 SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHRE----------------KNNVSLHWKLDVA  107 (259)
T ss_pred             HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhh----------------ccCCCHHHHHHHH
Confidence            6789999999999999999999999877 7789999999999997766521                2257888899999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc---------------ccCccccccCCCCccccccccCceecCCCCCCCchh
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI---------------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .|++.||.|||+.|++|+||||+||+++.               ||.+..........++..|+|||.+.+....++.++
T Consensus       108 ~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  187 (259)
T cd05037         108 KQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAA  187 (259)
T ss_pred             HHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhh
Confidence            99999999999999999999999999864               344433332223445778999999986324688999


Q ss_pred             hHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      |+||||+++|++++ |..||................      ..+         ......+.+++.+||..+|.+|||+.
T Consensus       188 Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~------~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~  252 (259)
T cd05037         188 DKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH------RLP---------MPDCAELANLINQCWTYDPTKRPSFR  252 (259)
T ss_pred             HHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC------CCC---------CCCchHHHHHHHHHhccChhhCCCHH
Confidence            99999999999999 577887654332222211000      000         11237899999999999999999999


Q ss_pred             HHhh
Q 037274          235 AQVL  238 (245)
Q Consensus       235 ~~l~  238 (245)
                      ++++
T Consensus       253 ~il~  256 (259)
T cd05037         253 AILR  256 (259)
T ss_pred             HHHH
Confidence            9986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.2e-34  Score=225.10  Aligned_cols=210  Identities=17%  Similarity=0.285  Sum_probs=158.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.+++.++||||+++++.+......+++|||+++|+|.+++....             ......++..+
T Consensus        35 ~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~  101 (268)
T cd05086          35 SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQ-------------WHRRNSQLLLL  101 (268)
T ss_pred             ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhh-------------cccccccHHHH
Confidence            34567789999999999999999999999999899999999999999987775311             01234667788


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------CCCCccccccccCceecCC-----
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------SSSSSITTWAAAPEVVNFG-----  147 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----  147 (245)
                      ..++.|++.||+|||+.+++|+||||+||+++.        ||.+.....      .....++..|+|||++...     
T Consensus       102 ~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  181 (268)
T cd05086         102 QRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLI  181 (268)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccc
Confidence            899999999999999999999999999999875        665532211      1223457889999998531     


Q ss_pred             CCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                      ...++.++||||||+++|+|++ |..||...+..+...........    ....    ......+++.+.+++..|| .+
T Consensus       182 ~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~l~~~c~-~~  252 (268)
T cd05086         182 TAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQV----KLFK----PQLELPYSERWYEVLQFCW-LS  252 (268)
T ss_pred             cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccc----ccCC----CccCCCCcHHHHHHHHHHh-hC
Confidence            1235789999999999999987 56788776655555444322211    1111    1112447788999999999 67


Q ss_pred             CCCCccHHHHhh
Q 037274          227 PAKRPAAEAQVL  238 (245)
Q Consensus       227 p~~Rpt~~~~l~  238 (245)
                      |.+||+++++++
T Consensus       253 P~~Rp~~~~i~~  264 (268)
T cd05086         253 PEKRATAEEVHR  264 (268)
T ss_pred             cccCCCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1.3e-34  Score=226.33  Aligned_cols=198  Identities=19%  Similarity=0.275  Sum_probs=154.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ....++..|+..+++++||||+++++++. +...++++|++++|+|.+++..                ....+++..+..
T Consensus        51 ~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~----------------~~~~~~~~~~~~  113 (279)
T cd05111          51 QTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQ----------------HRDSLDPQRLLN  113 (279)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHHHh----------------cccCCCHHHHHH
Confidence            45567888999999999999999999875 4557899999999999777642                124578899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCch
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ...++..|+|||.+.+  ..++.+
T Consensus       114 i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~--~~~~~~  191 (279)
T cd05111         114 WCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF--GRYTHQ  191 (279)
T ss_pred             HHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhcc--CCcCch
Confidence            9999999999999999999999999999975        66665332211      2234668999999987  558999


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +||||||+++|++++ |..||.+......... .....     ....       +...+..+.+++.+||..+|++|||+
T Consensus       192 ~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-~~~~~-----~~~~-------~~~~~~~~~~li~~c~~~~p~~Rps~  258 (279)
T cd05111         192 SDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL-LEKGE-----RLAQ-------PQICTIDVYMVMVKCWMIDENVRPTF  258 (279)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHCCC-----cCCC-------CCCCCHHHHHHHHHHcCCCcccCcCH
Confidence            999999999999998 9999987554333222 22111     1111       13456788999999999999999999


Q ss_pred             HHHhh
Q 037274          234 EAQVL  238 (245)
Q Consensus       234 ~~~l~  238 (245)
                      .++++
T Consensus       259 ~el~~  263 (279)
T cd05111         259 KELAN  263 (279)
T ss_pred             HHHHH
Confidence            99876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.2e-35  Score=254.58  Aligned_cols=213  Identities=18%  Similarity=0.200  Sum_probs=160.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|++++++++||||+++++++.+++..+++|||+++|+|.+++.......      ..........+...+.
T Consensus        43 e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~------~l~e~~~~~lsv~~iL  116 (932)
T PRK13184         43 PLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKE------SLSKELAEKTSVGAFL  116 (932)
T ss_pred             HHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhcc------ccchhhhcccCHHHHH
Confidence            4456789999999999999999999999999999999999999999998886321100      0001112345677888


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----------------------CCCCccccc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----------------------SSSSSITTW  137 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----------------------~~~~~~~~~  137 (245)
                      .++.|++.||+|||+.|++||||||+||+++.        ||++.....                      .....||+.
T Consensus       117 ~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~  196 (932)
T PRK13184        117 SIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPD  196 (932)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCC
Confidence            99999999999999999999999999999975        776654310                      012357999


Q ss_pred             cccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHH
Q 037274          138 AAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWN  217 (245)
Q Consensus       138 y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (245)
                      |+|||.+.+  ..++.++|||||||++|+|++|..||............  ..        ..+.. ......+++.+.+
T Consensus       197 YmAPE~l~g--~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~--~i--------~~P~~-~~p~~~iP~~L~~  263 (932)
T PRK13184        197 YMAPERLLG--VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRD--VI--------LSPIE-VAPYREIPPFLSQ  263 (932)
T ss_pred             CCCHHHhcC--CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhh--hc--------cChhh-ccccccCCHHHHH
Confidence            999999987  56899999999999999999999999874433222111  00        00000 0111467889999


Q ss_pred             HHHHhcCCCCCCCccHHHHhhc
Q 037274          218 MVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ++.+||+.||++|++..+.+..
T Consensus       264 LI~rcL~~DP~kR~ss~eeLl~  285 (932)
T PRK13184        264 IAMKALAVDPAERYSSVQELKQ  285 (932)
T ss_pred             HHHHHccCChhhCcCHHHHHHH
Confidence            9999999999999876665543

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=1e-34  Score=224.61  Aligned_cols=201  Identities=16%  Similarity=0.282  Sum_probs=157.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|++++++++|+||+++++.+.. ...++++||+++++|.+++..               .....+++..+
T Consensus        41 ~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~---------------~~~~~~~~~~~  104 (260)
T cd05073          41 GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKS---------------DEGSKQPLPKL  104 (260)
T ss_pred             ChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHh---------------CCccccCHHHH
Confidence            34456789999999999999999999999877 778999999999999777652               12345778888


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ..++.|++.||.|||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+..  ..++.
T Consensus       105 ~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~  182 (260)
T cd05073         105 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF--GSFTI  182 (260)
T ss_pred             HHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhcc--CCcCc
Confidence            999999999999999999999999999999986        55443222111     1122467999999986  56889


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++|+||||+++|++++ |..||...+.......+....      ..       ......+.++.+++.+|++.+|++||+
T Consensus       183 ~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~~i~~~l~~~p~~Rp~  249 (260)
T cd05073         183 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY------RM-------PRPENCPEELYNIMMRCWKNRPEERPT  249 (260)
T ss_pred             cccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC------CC-------CCcccCCHHHHHHHHHHcccCcccCcC
Confidence            9999999999999998 899998766555544433221      11       111457789999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      +.+++.
T Consensus       250 ~~~l~~  255 (260)
T cd05073         250 FEYIQS  255 (260)
T ss_pred             HHHHHH
Confidence            998764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.6e-35  Score=236.77  Aligned_cols=217  Identities=19%  Similarity=0.265  Sum_probs=167.2

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc-----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR-----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ....+.+.+|+.+++.++|+||+++++++...+     ..+++++|+++ +|.+++..                 ...++
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~-----------------~~~l~  101 (330)
T cd07834          40 LIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKS-----------------PQPLT  101 (330)
T ss_pred             chhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhh-hHHHHHhC-----------------CCCCC
Confidence            456678999999999999999999999987765     68999999984 78665542                 23688


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~  147 (245)
                      +..++.++.|++.||++||+.|++|+||||+||+++.        ||.+.......       ...+++.|+|||.+.+ 
T Consensus       102 ~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-  180 (330)
T cd07834         102 DDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLS-  180 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeec-
Confidence            9999999999999999999999999999999999986        55554433321       2345788999999986 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC---------------C--CCCCCCCccc
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA---------------P--NEDTTHGTRT  210 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~--~~~~~~~~~~  210 (245)
                      ...++.++|+||||+++|+|++|..||.+.+..+....+.............               .  ..........
T Consensus       181 ~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (330)
T cd07834         181 SSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPG  260 (330)
T ss_pred             ccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhccc
Confidence            2268899999999999999999999999877666555554433211110000               0  0000001133


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+..+.+++.+||+.+|.+||+++++++||||.
T Consensus       261 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~  293 (330)
T cd07834         261 ASPEAIDLLEKMLVFDPKKRITADEALAHPYLA  293 (330)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHhCccHH
Confidence            678899999999999999999999999999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=6.9e-36  Score=228.06  Aligned_cols=192  Identities=19%  Similarity=0.228  Sum_probs=149.9

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKET   93 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi   93 (245)
                      ..+|...+....||||+++++++...+..+++|||+++|+|.+++..                 ...+++..+..++.|+
T Consensus        32 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~~~~ql   94 (237)
T cd05576          32 YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK-----------------FLNIPEECVKRWAAEM   94 (237)
T ss_pred             hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH-----------------hcCCCHHHHHHHHHHH
Confidence            44566666667899999999999999999999999999999766642                 2348899999999999


Q ss_pred             HHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-CCCccccccccCceecCCCCCCCchhhHHHHHHHH
Q 037274           94 LKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITA  164 (245)
Q Consensus        94 ~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l  164 (245)
                      +.||.|||+.|++|+||||+||+++.        ||........ ....++..|+|||.+.+  ..++.++|+||+|+++
T Consensus        95 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il  172 (237)
T cd05576          95 VVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGI--SEETEACDWWSLGAIL  172 (237)
T ss_pred             HHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCC--CCCCchhhHHHHHHHH
Confidence            99999999999999999999999986        4433222221 12334677999999876  5578999999999999


Q ss_pred             HHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH-----HHHhhc
Q 037274          165 LQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA-----EAQVLQ  239 (245)
Q Consensus       165 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~~l~~  239 (245)
                      |++++|..|+......     . ..   ..  ..       ..+..+++.+.+++.+||+.||.+||++     +++++|
T Consensus       173 ~el~~g~~~~~~~~~~-----~-~~---~~--~~-------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  234 (237)
T cd05576         173 FELLTGKTLVECHPSG-----I-NT---HT--TL-------NIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSH  234 (237)
T ss_pred             HHHHHCcchhhcCchh-----c-cc---cc--cc-------CCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcC
Confidence            9999999887542110     0 00   00  00       1114578899999999999999999986     999999


Q ss_pred             ccc
Q 037274          240 EMW  242 (245)
Q Consensus       240 ~~f  242 (245)
                      |||
T Consensus       235 ~~~  237 (237)
T cd05576         235 PFF  237 (237)
T ss_pred             CCC
Confidence            998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=1.4e-34  Score=235.64  Aligned_cols=218  Identities=17%  Similarity=0.204  Sum_probs=163.3

Q ss_pred             HHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHH----------------
Q 037274            8 AEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQ----------------   70 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~----------------   70 (245)
                      ....+.+.+|+.++.++. ||||+++++++...+..++|+||+.+|+|.+++............                
T Consensus        81 ~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (401)
T cd05107          81 SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTP  160 (401)
T ss_pred             hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhccccccccccccccccc
Confidence            445567899999999997 999999999999989999999999999999998754211000000                


Q ss_pred             -----------------------------------------------------------------HHhhhccCCCCcHHH
Q 037274           71 -----------------------------------------------------------------LIMSNRHRYGITVDC   85 (245)
Q Consensus        71 -----------------------------------------------------------------~~~~~~~~~~~~~~~   85 (245)
                                                                                       ..........+++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  240 (401)
T cd05107         161 LSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMD  240 (401)
T ss_pred             ccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHH
Confidence                                                                             000001123577888


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..++.|++.||.|||+.+++|+||||+||+++.        ||++.......      ...+++.|+|||.+..  ..+
T Consensus       241 ~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  318 (401)
T cd05107         241 LVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN--NLY  318 (401)
T ss_pred             HHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC--CCC
Confidence            9999999999999999999999999999999886        77665432111      2234678999999986  558


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|+||||+++|||++ |..||......+.........   .  ..       ..+...+.++.+++.+||..+|.+|
T Consensus       319 ~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~---~--~~-------~~p~~~~~~l~~li~~cl~~~P~~R  386 (401)
T cd05107         319 TTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRG---Y--RM-------AKPAHASDEIYEIMQKCWEEKFEIR  386 (401)
T ss_pred             CcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcC---C--CC-------CCCCCCCHHHHHHHHHHcCCChhHC
Confidence            899999999999999998 889987654444333322221   0  00       1114568899999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      |++.+++..
T Consensus       387 Ps~~ell~~  395 (401)
T cd05107         387 PDFSQLVHL  395 (401)
T ss_pred             cCHHHHHHH
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1.3e-35  Score=237.64  Aligned_cols=217  Identities=17%  Similarity=0.214  Sum_probs=161.4

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ...+.+.+|+.++++++||||+++++++..    .+..++|+||+. ++|.+++..                 ...+++.
T Consensus        46 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----------------~~~~~~~  107 (334)
T cd07855          46 TLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHS-----------------DQPLTEE  107 (334)
T ss_pred             cchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhcc-----------------CCCCCHH
Confidence            356678889999999999999999988753    346899999996 588665542                 3458899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--------CCccccccccCceecCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~  148 (245)
                      .+..++.|++.||.|||+.|++|+||||+||+++.        ||.+.......        ...++..|+|||.+.. .
T Consensus       108 ~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~  186 (334)
T cd07855         108 HIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLS-L  186 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcC-C
Confidence            99999999999999999999999999999999987        55544322111        2345788999999764 2


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc-----------------CCCCCCCCCCCCcccc
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS-----------------LQVAPNEDTTHGTRTL  211 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~  211 (245)
                      ..++.++|+||||+++|+|++|+.||.+.+.......+.........                 ................
T Consensus       187 ~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (334)
T cd07855         187 PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKA  266 (334)
T ss_pred             cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccC
Confidence            44789999999999999999999999876654444333322111000                 0000000000011346


Q ss_pred             cHHHHHHHHHhcCCCCCCCccHHHHhhcccccc
Q 037274          212 SKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHF  244 (245)
Q Consensus       212 ~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~~  244 (245)
                      +.++.++|.+||+.+|.+|||+++++.||||.-
T Consensus       267 ~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~  299 (334)
T cd07855         267 SPEALDLLSQMLQFDPEERITVEQALQHPFLAQ  299 (334)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence            889999999999999999999999999999953

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=4.9e-35  Score=229.86  Aligned_cols=207  Identities=18%  Similarity=0.183  Sum_probs=162.5

Q ss_pred             HHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+.+|+++++++ +|+||+++++.+..++..++++||+++++|.+++..                 ...+++..+..
T Consensus        47 ~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~~~  109 (290)
T cd05613          47 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQ-----------------RERFKEQEVQI  109 (290)
T ss_pred             HHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHH-----------------cCCCCHHHHHH
Confidence            456788999999999 589999999999988899999999999999776642                 24578889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.||.|||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+..+...++.++
T Consensus       110 ~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  189 (290)
T cd05613         110 YSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAV  189 (290)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccc
Confidence            9999999999999999999999999999975        66554432211     2346889999999876444578899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc----
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP----  231 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----  231 (245)
                      ||||||+++|++++|..||...................   . +      ..+..+++.+.+++++||+.+|.+||    
T Consensus       190 Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~---~-~------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~  259 (290)
T cd05613         190 DWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS---E-P------PYPQEMSALAKDIIQRLLMKDPKKRLGCGP  259 (290)
T ss_pred             cHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc---C-C------CCCccCCHHHHHHHHHHhcCCHHHhcCCCC
Confidence            99999999999999999997543322222222211100   0 0      01245788999999999999999997    


Q ss_pred             -cHHHHhhccccc
Q 037274          232 -AAEAQVLQEMWH  243 (245)
Q Consensus       232 -t~~~~l~~~~f~  243 (245)
                       ++++++.||||.
T Consensus       260 ~~~~~l~~~~~~~  272 (290)
T cd05613         260 SDADEIKKHPFFQ  272 (290)
T ss_pred             CCHHHHHcCcccc
Confidence             899999999986

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-34  Score=224.31  Aligned_cols=202  Identities=21%  Similarity=0.300  Sum_probs=159.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .+..+.+.+|++++++++|+||+++++++.+.  +..++++|++++++|.+++..                 ...+++..
T Consensus        45 ~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-----------------~~~l~~~~  107 (264)
T cd06653          45 SKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA-----------------YGALTENV  107 (264)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHH-----------------cCCCCHHH
Confidence            45667899999999999999999999998664  458899999999999766642                 23477888


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------CCCccccccccCceecCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------SSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      +..++.|++.||.|||+.|++|+||+|+||+++.        ||.+......       ....++..|+|||.+.+  ..
T Consensus       108 ~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~  185 (264)
T cd06653         108 TRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISG--EG  185 (264)
T ss_pred             HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcC--CC
Confidence            8999999999999999999999999999999875        6655433211       12345788999999986  56


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      ++.++|+||||+++|++++|+.||................   .         ....+...++.+.+++.+||+ +|.+|
T Consensus       186 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~---------~~~~p~~~~~~~~~~i~~~l~-~~~~r  252 (264)
T cd06653         186 YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQP---T---------KPMLPDGVSDACRDFLKQIFV-EEKRR  252 (264)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCC---C---------CCCCCcccCHHHHHHHHHHhc-CcccC
Confidence            8899999999999999999999998754443333221111   0         011225678999999999999 57999


Q ss_pred             ccHHHHhhccc
Q 037274          231 PAAEAQVLQEM  241 (245)
Q Consensus       231 pt~~~~l~~~~  241 (245)
                      |++.+++.|||
T Consensus       253 ~~~~~~~~~~~  263 (264)
T cd06653         253 PTAEFLLRHPF  263 (264)
T ss_pred             ccHHHHhcCCC
Confidence            99999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=1e-34  Score=232.73  Aligned_cols=216  Identities=19%  Similarity=0.256  Sum_probs=160.1

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ......+.+|+.+++++ +||||+++++++...  ...++|+|++++ +|.+++..                  ..+++.
T Consensus        47 ~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~------------------~~~~~~  107 (337)
T cd07852          47 ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRA------------------NILEDV  107 (337)
T ss_pred             chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhc------------------CCCCHH
Confidence            34556678899999999 999999999998653  358999999984 88665542                  256778


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---------CCccccccccCceecCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---------~~~~~~~y~aPE~~~~~  147 (245)
                      .+..++.|++.||.|||+.|++|+||+|+||+++.        ||.+.......         ...+++.|+|||.+.+ 
T Consensus       108 ~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-  186 (337)
T cd07852         108 HKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLG-  186 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeec-
Confidence            88889999999999999999999999999999976        55554332211         2235788999998864 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc-----------------CCCCCCCCCCCCccc
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS-----------------LQVAPNEDTTHGTRT  210 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~  210 (245)
                      ...++.++|+||||+++|+|++|+.||.+........+..........                 ...............
T Consensus       187 ~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (337)
T cd07852         187 STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPK  266 (337)
T ss_pred             cccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccC
Confidence            345788999999999999999999999876554443333222211000                 000000000111133


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++.++.++|.+||+.+|.+|||+.++++||||+
T Consensus       267 ~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~  299 (337)
T cd07852         267 ASDDALDLLKKLLVFNPNKRLTAEEALEHPYVA  299 (337)
T ss_pred             CCHHHHHHHHHhccCCcccccCHHHHhhChhhh
Confidence            688999999999999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.9e-34  Score=225.31  Aligned_cols=200  Identities=17%  Similarity=0.212  Sum_probs=157.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.+++.++|+||+++++++.. ...+++++++++|+|.+++..                ....+++..+
T Consensus        49 ~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~----------------~~~~~~~~~~  111 (279)
T cd05109          49 SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVRE----------------NKDRIGSQDL  111 (279)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhh----------------ccCCCCHHHH
Confidence            45567789999999999999999999998865 457899999999999776642                1245888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||+|||++|++|+||||+||+++.        ||++.......      ...+++.|+|||.+.+  ..++
T Consensus       112 ~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~  189 (279)
T cd05109         112 LNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILH--RRFT  189 (279)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhcc--CCCC
Confidence            999999999999999999999999999999965        77665443211      1223567999999976  5688


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|||||||++||+++ |..||...........+....      ..+.       +...+..+.+++.+||..||++||
T Consensus       190 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~~li~~~l~~dp~~Rp  256 (279)
T cd05109         190 HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE------RLPQ-------PPICTIDVYMIMVKCWMIDSECRP  256 (279)
T ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC------cCCC-------CccCCHHHHHHHHHHcCCChhhCc
Confidence            99999999999999988 889987755444333222111      0111       145678999999999999999999


Q ss_pred             cHHHHhh
Q 037274          232 AAEAQVL  238 (245)
Q Consensus       232 t~~~~l~  238 (245)
                      ++.+++.
T Consensus       257 ~~~~l~~  263 (279)
T cd05109         257 RFRELVD  263 (279)
T ss_pred             CHHHHHH
Confidence            9999884

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-36  Score=232.13  Aligned_cols=218  Identities=16%  Similarity=0.191  Sum_probs=165.2

Q ss_pred             HHHHHHHHHHHHHHhhCCC--C----CeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            8 AEEYAKLAREIYRYKHLSH--P----NIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h--~----~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      .+-.+..+-|+++|.++.+  |    -+|.+.++|.-.+..|+|+|.+.. |+.+++.               .+...++
T Consensus       126 ~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG~-S~~dFlk---------------~N~y~~f  189 (415)
T KOG0671|consen  126 DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLGL-STFDFLK---------------ENNYIPF  189 (415)
T ss_pred             HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccCh-hHHHHhc---------------cCCcccc
Confidence            3445667789999999942  2    467888889999999999998853 8855554               3445679


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc----------------------------ccCccccccCCC-C
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------------------------FNDDTRNWISSS-S  132 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------------------------f~~~~~~~~~~~-~  132 (245)
                      +...+..|+.|+++++++||+.+++|.||||+|||+..                            ||.+........ .
T Consensus       190 pi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~i  269 (415)
T KOG0671|consen  190 PIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTI  269 (415)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCccee
Confidence            99999999999999999999999999999999999865                            666555544332 3


Q ss_pred             ccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchH---HHHHHHhcCCCCccCCC-----------
Q 037274          133 SITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLD---IMTKMLMKQPKSTSLQV-----------  198 (245)
Q Consensus       133 ~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~-----------  198 (245)
                      ..|..|.|||++.+  .+|+..+||||+||+|+|+++|...|...++.+   +++.+....+.......           
T Consensus       270 VsTRHYRAPEViLg--LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rl  347 (415)
T KOG0671|consen  270 VSTRHYRAPEVILG--LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRL  347 (415)
T ss_pred             eeccccCCchheec--cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccc
Confidence            44899999999998  889999999999999999999999999877655   55555443322111111           


Q ss_pred             --CCCCC------C----------CCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          199 --APNED------T----------THGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       199 --~~~~~------~----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                        +....      .          .........++.+|+++||.+||.+|+|+.|++.||||.
T Consensus       348 dw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~  410 (415)
T KOG0671|consen  348 DWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFA  410 (415)
T ss_pred             cCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhh
Confidence              00000      0          000122234688999999999999999999999999996

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.6e-34  Score=224.53  Aligned_cols=199  Identities=19%  Similarity=0.293  Sum_probs=158.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ......+.+|+.++++++|+||+++++++.. ...++++||+++|+|.+++..                ....+++..+.
T Consensus        50 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~----------------~~~~~~~~~~~  112 (279)
T cd05057          50 PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRN----------------HKDNIGSQYLL  112 (279)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHh----------------ccCCCCHHHHH
Confidence            4566789999999999999999999999876 789999999999999776642                12358899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC------CccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS------SSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||+|||+.|++|+||+|+||+++.        ||.+........      ..++..|+|||.+..  ..++.
T Consensus       113 ~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~  190 (279)
T cd05057         113 NWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH--RIYTH  190 (279)
T ss_pred             HHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhc--CCcCc
Confidence            99999999999999999999999999999975        665544332211      112467999999876  56889


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++|+||||+++|++++ |..||......+....+....      ..+.       +...+..+.+++.+||..+|.+||+
T Consensus       191 ~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~~~~~~~l~~~p~~Rp~  257 (279)
T cd05057         191 KSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE------RLPQ-------PPICTIDVYMVLVKCWMIDAESRPT  257 (279)
T ss_pred             hhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC------CCCC-------CCCCCHHHHHHHHHHcCCChhhCCC
Confidence            9999999999999998 999998866554443333211      1111       1346678999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      +.++++
T Consensus       258 ~~~l~~  263 (279)
T cd05057         258 FKELIN  263 (279)
T ss_pred             HHHHHH
Confidence            998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=3.5e-35  Score=232.80  Aligned_cols=214  Identities=19%  Similarity=0.262  Sum_probs=156.0

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCc--------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQR--------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ...+.+|+++++.++|+||+++++.+....        ..+++++|+.+ ++...+..                ....++
T Consensus        51 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~----------------~~~~~~  113 (311)
T cd07866          51 PITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLEN----------------PSVKLT  113 (311)
T ss_pred             chhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhc----------------cccCCC
Confidence            346788999999999999999998875433        46999999875 56443331                134689


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---------------CCccccccc
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---------------SSSITTWAA  139 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---------------~~~~~~~y~  139 (245)
                      +..+..++.|+++||.|||+.|++|+||||+||+++.        ||.+.......               ...+++.|+
T Consensus       114 ~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  193 (311)
T cd07866         114 ESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYR  193 (311)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcC
Confidence            9999999999999999999999999999999999976        55443222111               112367799


Q ss_pred             cCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC----------------CCCC
Q 037274          140 APEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA----------------PNED  203 (245)
Q Consensus       140 aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~  203 (245)
                      |||.+.+ ...++.++||||||+++|+|++|++||.+.+.......+............+                .+..
T Consensus       194 aPE~~~~-~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (311)
T cd07866         194 PPELLLG-ERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRT  272 (311)
T ss_pred             ChHHhhC-CCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCcc
Confidence            9998864 3457899999999999999999999998876655544443322110000000                0000


Q ss_pred             CCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          204 TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       204 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      ........++.+.+++.+||+.||.+|||+.+++.||||
T Consensus       273 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         273 LEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            000113455788999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.6e-34  Score=224.27  Aligned_cols=206  Identities=19%  Similarity=0.256  Sum_probs=159.1

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|++++++++|+||+++++.+..++..++++||+++++|.+++...             ......+++..+.
T Consensus        43 ~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~  109 (267)
T cd08224          43 AKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHF-------------KKQKRLIPERTIW  109 (267)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHh-------------cccCCCcCHHHHH
Confidence            345778999999999999999999999999999999999999999997776521             1123457889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.++
T Consensus       110 ~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~--~~~~~~~  187 (267)
T cd08224         110 KYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE--NGYNFKS  187 (267)
T ss_pred             HHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhcc--CCCCchh
Confidence            99999999999999999999999999999975        5554332221    12345788999999876  5688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |+||||+++|++++|+.||......  ..............        .......+..+.+++.+||..+|++|||+.+
T Consensus       188 Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~  257 (267)
T cd08224         188 DIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEKCDYP--------PLPADHYSEELRDLVSRCINPDPEKRPDISY  257 (267)
T ss_pred             cHHHHHHHHHHHHHCCCCcccCCcc--HHHHHhhhhcCCCC--------CCChhhcCHHHHHHHHHHcCCCcccCCCHHH
Confidence            9999999999999999999654321  11111111100000        0111357789999999999999999999999


Q ss_pred             Hhh
Q 037274          236 QVL  238 (245)
Q Consensus       236 ~l~  238 (245)
                      +++
T Consensus       258 il~  260 (267)
T cd08224         258 VLQ  260 (267)
T ss_pred             HHH
Confidence            875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=3e-35  Score=229.73  Aligned_cols=202  Identities=20%  Similarity=0.276  Sum_probs=165.1

Q ss_pred             HHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+..+.+.+|+.++++++ |+||+++++.+..++..+++||++++++|.+++..                 ...+++..+
T Consensus        42 ~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~  104 (280)
T cd05581          42 EKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK-----------------YGSLDEKCT  104 (280)
T ss_pred             hHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHH-----------------cCCCCHHHH
Confidence            445678899999999998 99999999999999999999999999999776652                 236899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------------------------CCcc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------------------------SSSI  134 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------------------------~~~~  134 (245)
                      +.++.|++.||.+||+.|++|+||+|+||+++.        ||.+.......                        ...+
T Consensus       105 ~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (280)
T cd05581         105 RFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVG  184 (280)
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccC
Confidence            999999999999999999999999999999875        55443322211                        1234


Q ss_pred             ccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHH
Q 037274          135 TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKN  214 (245)
Q Consensus       135 ~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (245)
                      +..|+|||....  ...+.++|+||||++++++++|..||................              ...+..+++.
T Consensus       185 ~~~~~~Pe~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~  248 (280)
T cd05581         185 TAEYVSPELLNE--KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE--------------YSFPPNFPPD  248 (280)
T ss_pred             CccccCHHHhCC--CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC--------------CCCCCccCHH
Confidence            788999999876  558899999999999999999999999866544443332111              0111456889


Q ss_pred             HHHHHHHhcCCCCCCCccH----HHHhhcccc
Q 037274          215 FWNMVKICLAPDPAKRPAA----EAQVLQEMW  242 (245)
Q Consensus       215 ~~~li~~~l~~~p~~Rpt~----~~~l~~~~f  242 (245)
                      +.+++.+||+.+|.+||++    +++++||||
T Consensus       249 ~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         249 AKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             HHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            9999999999999999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=1.1e-34  Score=229.04  Aligned_cols=215  Identities=18%  Similarity=0.196  Sum_probs=160.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc----------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCC
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQR----------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY   79 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~----------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   79 (245)
                      ....+.+|++++++++||||+++++++.+.+          ..++++||+++ ++.+++..                ...
T Consensus        49 ~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~----------------~~~  111 (302)
T cd07864          49 FPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLES----------------GLV  111 (302)
T ss_pred             chHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhc----------------CCC
Confidence            3456788999999999999999999987654          78999999986 66444431                134


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecC
Q 037274           80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNF  146 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~  146 (245)
                      .+++..+..++.|++.||+|||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+
T Consensus       112 ~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  191 (302)
T cd07864         112 HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLG  191 (302)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcC
Confidence            6889999999999999999999999999999999999886        55554332211     1234678999998864


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCC----------------CCCCCCccc
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPN----------------EDTTHGTRT  210 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~  210 (245)
                       ...++.++||||||+++++|++|+.||...+.......+............+..                .........
T Consensus       192 -~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (302)
T cd07864         192 -EERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSF  270 (302)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCC
Confidence             345688999999999999999999999876665554444332211110000000                000011234


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      .+..+.+++..||+.+|.+||++.+++.||||
T Consensus       271 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         271 IPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            68899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-35  Score=238.88  Aligned_cols=201  Identities=18%  Similarity=0.345  Sum_probs=168.9

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      +.+.++.+.|.+|+.+|++++||||++++|.|. +...|+|||.++-|.|.++++.                .+..++..
T Consensus       429 d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~P~WivmEL~~~GELr~yLq~----------------nk~sL~l~  491 (974)
T KOG4257|consen  429 DCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQPMWIVMELAPLGELREYLQQ----------------NKDSLPLR  491 (974)
T ss_pred             CCChhhHHHHHHHHHHHHhCCCcchhheeeeee-ccceeEEEecccchhHHHHHHh----------------ccccchHH
Confidence            356778999999999999999999999999985 5578999999999999888874                25678889


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCcc-----ccccccCceecCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSI-----TTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~-----~~~y~aPE~~~~~~~~~  151 (245)
                      .+..++.||+.||+|||+.++|||||-.+|||+..        ||+++..........     ..-|||||.++.  ..+
T Consensus       492 tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINf--RrF  569 (974)
T KOG4257|consen  492 TLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINF--RRF  569 (974)
T ss_pred             HHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccch--hcc
Confidence            99999999999999999999999999999999876        999987776653322     678999999998  779


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|||.||+.+||++. |..||.+-.+.+..-.+.+..      +.+.       +..+++.+..++.+||+++|.+|
T Consensus       570 TtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGe------RlP~-------P~nCPp~LYslmskcWayeP~kR  636 (974)
T KOG4257|consen  570 TTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGE------RLPC-------PPNCPPALYSLMSKCWAYEPSKR  636 (974)
T ss_pred             cchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCC------CCCC-------CCCCChHHHHHHHHHhccCcccC
Confidence            999999999999999976 889999866555432222111      2222       27799999999999999999999


Q ss_pred             ccHHHHh
Q 037274          231 PAAEAQV  237 (245)
Q Consensus       231 pt~~~~l  237 (245)
                      |++.++.
T Consensus       637 Prftei~  643 (974)
T KOG4257|consen  637 PRFTEIK  643 (974)
T ss_pred             CcHHHHH
Confidence            9988764

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=9.6e-35  Score=224.05  Aligned_cols=206  Identities=21%  Similarity=0.260  Sum_probs=165.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ......+.+|++++++++|+||+++++++...+..++++|++++++|.+++...             ......+++..++
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~  106 (256)
T cd08530          40 QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKR-------------KKKRKLIPEQEIW  106 (256)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHH-------------HhhcCCCCHHHHH
Confidence            345667889999999999999999999999999999999999999998877521             1123568899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC--CCCccccccccCceecCCCCCCCchhhH
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      .++.|++.||++||+.|++|+||+|+||+++.        ||.+......  ....+++.|+|||.+.+  ..++.++|+
T Consensus       107 ~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~--~~~~~~~D~  184 (256)
T cd08530         107 RIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKG--RPYSYKSDI  184 (256)
T ss_pred             HHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCC--CCCCchhhH
Confidence            99999999999999999999999999999986        5544333222  12345889999999986  568889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||++++++++|+.||...+............       .+      ..+..++.++.+++.+|++.+|++||++.+++
T Consensus       185 ~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l  251 (256)
T cd08530         185 WSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK-------YP------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKIL  251 (256)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------CC------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            999999999999999998766544333322111       00      01145778999999999999999999999999


Q ss_pred             hccc
Q 037274          238 LQEM  241 (245)
Q Consensus       238 ~~~~  241 (245)
                      +||+
T Consensus       252 ~~p~  255 (256)
T cd08530         252 ASPA  255 (256)
T ss_pred             cCCC
Confidence            9996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=2.8e-34  Score=221.65  Aligned_cols=200  Identities=18%  Similarity=0.303  Sum_probs=161.5

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+..++.++|+||+++++.+.+.+..++++|++++++|.+++...               ....+++..+..
T Consensus        43 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~---------------~~~~~~~~~~~~  107 (258)
T smart00219       43 QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKN---------------RPKELSLSDLLS  107 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhh---------------hhccCCHHHHHH
Confidence            36789999999999999999999999999999999999999999997777521               112288999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.||++||+.|++|+||+|+||+++.        ||.+.......     ...+++.|+|||.+.+  ..++.++
T Consensus       108 ~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~--~~~~~~~  185 (258)
T smart00219      108 FALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKD--GKFTSKS  185 (258)
T ss_pred             HHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhcc--CCCCcch
Confidence            9999999999999999999999999999987        55544333221     1224678999999865  6688999


Q ss_pred             hHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      |+||||+++++|++ |..||...+.............      ..       .+...+.++.+++.+|+..+|.+|||+.
T Consensus       186 Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~  252 (258)
T smart00219      186 DVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR------LP-------KPENCPPEIYKLMLQCWAEDPEDRPTFS  252 (258)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC------CC-------CCCcCCHHHHHHHHHHCcCChhhCcCHH
Confidence            99999999999998 7889887665555554433221      11       1134788999999999999999999999


Q ss_pred             HHhh
Q 037274          235 AQVL  238 (245)
Q Consensus       235 ~~l~  238 (245)
                      ++++
T Consensus       253 ~ll~  256 (258)
T smart00219      253 ELVE  256 (258)
T ss_pred             HHHh
Confidence            9886

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-35  Score=228.73  Aligned_cols=217  Identities=22%  Similarity=0.328  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+..|+.++++++|+||+++++++.+.+..++++|++++ +|.+++...                ...+++..+.
T Consensus        39 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~i~~~----------------~~~~~~~~~~  101 (282)
T cd07829          39 EGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKR----------------PGPLSPNLIK  101 (282)
T ss_pred             ccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCc-CHHHHHHhh----------------ccCCCHHHHH
Confidence            33456788999999999999999999999998999999999984 897777521                1458899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.+||+.|++|+||+|+||+++.        ||.+.......    ....+..|+|||.+.. ...++.++
T Consensus       102 ~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~~  180 (282)
T cd07829         102 SIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLG-SKHYSTAV  180 (282)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcC-CcCCCccc
Confidence            99999999999999999999999999999976        55544332221    2233677999999875 23688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc---------------CCCCCCCCCCCCcccccHHHHHHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS---------------LQVAPNEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~li~  220 (245)
                      |+||||++++++++|..||...+.......+.........               ................+..+.+++.
T Consensus       181 Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  260 (282)
T cd07829         181 DIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLS  260 (282)
T ss_pred             cHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHH
Confidence            9999999999999999999886655554443322111000               0000000000111234788999999


Q ss_pred             HhcCCCCCCCccHHHHhhcccc
Q 037274          221 ICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      +||..+|.+||++++++.||||
T Consensus       261 ~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         261 KMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HhhccCcccCCCHHHHhhCcCC
Confidence            9999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-34  Score=226.41  Aligned_cols=214  Identities=19%  Similarity=0.244  Sum_probs=161.2

Q ss_pred             HHHHHHHHHHHhhC---CCCCeeeEEEEEEeCce-----eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274           11 YAKLAREIYRYKHL---SHPNIIPIYKTMISQRQ-----LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus        11 ~~~~~~E~~~l~~l---~h~~Iv~~~~~~~~~~~-----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ...+.+|+.+++++   +|+||+++++++...+.     .++++|++.+ +|.+++..               .....++
T Consensus        42 ~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~---------------~~~~~l~  105 (287)
T cd07838          42 PLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSK---------------CPKPGLP  105 (287)
T ss_pred             hhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHH---------------ccCCCCC
Confidence            45677788877766   59999999999988776     9999999985 78666542               1223588


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..+..++.|++.||.|||+.+++|+||+|+||+++.        ||.+.......   ...++..|+|||.+.+  ..+
T Consensus       106 ~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~  183 (287)
T cd07838         106 PETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQ--SSY  183 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhcc--CCC
Confidence            9999999999999999999999999999999999887        55544332221   2235778999999987  558


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCC-------------CCCCCCcccccHHHHHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPN-------------EDTTHGTRTLSKNFWNM  218 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l  218 (245)
                      +.++|+||||+++|+|++|.+||......+....+............+..             ..........++.+.++
T Consensus       184 ~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  263 (287)
T cd07838         184 ATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDL  263 (287)
T ss_pred             CCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHH
Confidence            89999999999999999999999887766665555443221111000000             00001112456788999


Q ss_pred             HHHhcCCCCCCCccHHHHhhcccc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      +.+||+.||.+||+++++++||||
T Consensus       264 i~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         264 LKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             HHHHhccCCccCCCHHHHhcCcCC
Confidence            999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.8e-35  Score=235.62  Aligned_cols=216  Identities=19%  Similarity=0.279  Sum_probs=162.6

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCce------eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ------LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ....+.+.+|+.++++++|+||+++++++...+.      .++|+|++. ++|.+++.                  ...+
T Consensus        55 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~------------------~~~l  115 (343)
T cd07851          55 AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMG-ADLNNIVK------------------CQKL  115 (343)
T ss_pred             hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCC-CCHHHHHh------------------cCCC
Confidence            3455678899999999999999999988765544      899999984 58966664                  2458


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-CCCccccccccCceecCCCCCCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ++..++.++.|++.||.|||+.|++|+||+|+||+++.        ||.+...... ....++..|+|||.+.+ ...++
T Consensus       116 ~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~  194 (343)
T cd07851         116 SDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN-WMHYN  194 (343)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHHHHhC-CCCCC
Confidence            89999999999999999999999999999999999876        5555443222 23345888999999864 23578


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc---C--------------CCCCCCCCCCCcccccHHH
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS---L--------------QVAPNEDTTHGTRTLSKNF  215 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~--------------~~~~~~~~~~~~~~~~~~~  215 (245)
                      .++||||||+++|++++|+.||...+.......+.........   .              ...............+..+
T Consensus       195 ~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l  274 (343)
T cd07851         195 QTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLA  274 (343)
T ss_pred             chHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHH
Confidence            9999999999999999999999876665554444332211000   0              0000000000113458899


Q ss_pred             HHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          216 WNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       216 ~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+++.+||+.+|.+|||+.++++||||.
T Consensus       275 ~dli~~~l~~~P~~Rpt~~ell~h~~~~  302 (343)
T cd07851         275 IDLLEKMLVLDPDKRITAAEALAHPYLA  302 (343)
T ss_pred             HHHHHHhCCCChhhCCCHHHHhcCCCcc
Confidence            9999999999999999999999999985

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=3e-34  Score=224.74  Aligned_cols=206  Identities=17%  Similarity=0.213  Sum_probs=154.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+..+.+.+|++++++++||||+++++++...  ...++++||+++++|.+++..                ....+++.
T Consensus        46 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~----------------~~~~~~~~  109 (284)
T cd05079          46 GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR----------------NKNKINLK  109 (284)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHh----------------ccCCCCHH
Confidence            355667899999999999999999999998765  568999999999999776642                12357889


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~  149 (245)
                      .+..++.|++.||+|||++|++|+||||+||+++.        ||.+.......       ...++..|+|||.+.+  .
T Consensus       110 ~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~--~  187 (284)
T cd05079         110 QQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQ--S  187 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhcc--C
Confidence            99999999999999999999999999999999976        66554332211       2234667999999876  5


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCch-----------HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHH
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDL-----------DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM  218 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  218 (245)
                      .++.++|+||||+++|++++++.|.......           ..............         .......++..+.++
T Consensus       188 ~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l  258 (284)
T cd05079         188 KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK---------RLPRPPNCPEEVYQL  258 (284)
T ss_pred             CCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc---------cCCCCCCCCHHHHHH
Confidence            6889999999999999999987664331100           00000000000000         011124578899999


Q ss_pred             HHHhcCCCCCCCccHHHHhhc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      +.+||+.+|.+|||+.++++.
T Consensus       259 i~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         259 MRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHccCCcccCcCHHHHHHH
Confidence            999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=6.1e-35  Score=233.92  Aligned_cols=217  Identities=17%  Similarity=0.240  Sum_probs=160.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC-----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ-----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ....+.+.+|+.+++.++|+||+++++++...     ...++++||+. ++|.+++..                 ...++
T Consensus        45 ~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----------------~~~l~  106 (337)
T cd07858          45 RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRS-----------------SQTLS  106 (337)
T ss_pred             cchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhc-----------------CCCCC
Confidence            34456778999999999999999999987543     34799999997 578555531                 34688


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      +..+..++.|++.||.|||+++++|+||+|+||+++.        ||.+......    ....++..|+|||.+.. ...
T Consensus       107 ~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~  185 (337)
T cd07858         107 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLN-CSE  185 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhc-CCC
Confidence            9999999999999999999999999999999999875        6665544322    22345788999998864 234


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------CCC--CCCCCCCCcccccH
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------QVA--PNEDTTHGTRTLSK  213 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~--~~~~~~~~~~~~~~  213 (245)
                      ++.++|+||||+++|+|++|+.||.+.+.......+..........               ...  ...........+++
T Consensus       186 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (337)
T cd07858         186 YTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANP  265 (337)
T ss_pred             CCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCH
Confidence            8899999999999999999999997754433222222111000000               000  00000011135788


Q ss_pred             HHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          214 NFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       214 ~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++.+++.+||+.+|.+|||++++++||||.
T Consensus       266 ~~~~li~~~l~~~P~~Rps~~ell~h~~~~  295 (337)
T cd07858         266 LAIDLLEKMLVFDPSKRITVEEALAHPYLA  295 (337)
T ss_pred             HHHHHHHHHhcCChhhccCHHHHHcCcchh
Confidence            999999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-36  Score=239.66  Aligned_cols=208  Identities=18%  Similarity=0.246  Sum_probs=165.1

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+.+..+.|++|+.+|++-+|.||+-+.|++-.++. -||+.+|+|.+|+.+++-                ....|+..
T Consensus       426 ~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv----------------~etkfdm~  488 (678)
T KOG0193|consen  426 DPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHV----------------QETKFDMN  488 (678)
T ss_pred             CCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccc----------------hhhhhhHH
Confidence            3466799999999999999999999999999977665 999999999999888863                13568899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecC-CCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNF-GDD  149 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~-~~~  149 (245)
                      ....|+.||+.|+.|||.++|+|+|||..||++..        ||++..-....      ...+...|||||++.. ...
T Consensus       489 ~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~n  568 (678)
T KOG0193|consen  489 TTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDN  568 (678)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccC
Confidence            99999999999999999999999999999999765        88765433322      2233678999999875 246


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      .|++.+||||||+++|||++|..||...+....   +++...+....+.      .......+.++++|+..||..++++
T Consensus       569 PfS~qSDVYaFGiV~YELltg~lPysi~~~dqI---ifmVGrG~l~pd~------s~~~s~~pk~mk~Ll~~C~~~~~~e  639 (678)
T KOG0193|consen  569 PFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI---IFMVGRGYLMPDL------SKIRSNCPKAMKRLLSDCWKFDREE  639 (678)
T ss_pred             CCCcccchhhhhHHHHHHHhCcCCcCCCChhhe---EEEecccccCccc------hhhhccCHHHHHHHHHHHHhcCccc
Confidence            789999999999999999999999994333222   2222222111111      1222667789999999999999999


Q ss_pred             CccHHHHhh
Q 037274          230 RPAAEAQVL  238 (245)
Q Consensus       230 Rpt~~~~l~  238 (245)
                      ||.+.+|+.
T Consensus       640 RP~F~~il~  648 (678)
T KOG0193|consen  640 RPLFPQLLS  648 (678)
T ss_pred             CccHHHHHH
Confidence            999999875

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-35  Score=238.80  Aligned_cols=195  Identities=19%  Similarity=0.246  Sum_probs=156.2

Q ss_pred             HHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           12 AKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        12 ~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+..+|+.++... +||||+++.+.+.+....|+|||.+.++.+.+-+               .+  .+.+. .++..|+
T Consensus       360 ~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri---------------~~--~~~~~-~e~~~w~  421 (612)
T KOG0603|consen  360 DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRI---------------RS--KPEFC-SEASQWA  421 (612)
T ss_pred             cccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHH---------------Hh--cchhH-HHHHHHH
Confidence            3456677666655 6999999999999999999999999998873322               22  12222 7778899


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceecc-c--------ccCccccccCC-CCccccccccCceecCCCCCCCchhhHHHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHN-I--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~-~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      ++|+.|+.|||++|+|||||||+|||+. .        ||......... ..+.|..|.|||++..  ..++.++|+|||
T Consensus       422 ~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~--~~yt~acD~WSL  499 (612)
T KOG0603|consen  422 AELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAI--QEYTEACDWWSL  499 (612)
T ss_pred             HHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhhcc--CCCCcchhhHHH
Confidence            9999999999999999999999999994 3        77666554432 2345889999999986  789999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCch-HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          161 GITALQFPCGGLPVSRRQDL-DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      |++||+|++|+.||...... +.+..+...                ..+..+|.+.++|++.||+.||.+||++.++..|
T Consensus       500 GvlLy~ML~G~tp~~~~P~~~ei~~~i~~~----------------~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  500 GVLLYEMLTGRTLFAAHPAGIEIHTRIQMP----------------KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             HHHHHHHHhCCCccccCCchHHHHHhhcCC----------------ccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence            99999999999999886655 332222111                1116689999999999999999999999999999


Q ss_pred             ccc
Q 037274          240 EMW  242 (245)
Q Consensus       240 ~~f  242 (245)
                      |||
T Consensus       564 ~w~  566 (612)
T KOG0603|consen  564 PWF  566 (612)
T ss_pred             cch
Confidence            998

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.8e-34  Score=231.69  Aligned_cols=216  Identities=19%  Similarity=0.261  Sum_probs=161.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ....+.+.+|++++++++||||+++++.+..++      ..++|++++ +++|.+++.                  ...+
T Consensus        55 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~------------------~~~l  115 (343)
T cd07880          55 ELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMK------------------HEKL  115 (343)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHh------------------cCCC
Confidence            334567889999999999999999999987653      358999998 568865553                  2457


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ++..+..++.|++.||.|||+.|++|+||+|+||+++.        ||.+....... ...+++.|+|||.+.+ ...++
T Consensus       116 ~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~  194 (343)
T cd07880         116 SEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILN-WMHYT  194 (343)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHHhC-CCCCC
Confidence            88999999999999999999999999999999999975        66655433222 2345889999999864 23478


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCc---------------cCCCCCC--CCCCCCcccccHHH
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST---------------SLQVAPN--EDTTHGTRTLSKNF  215 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~--~~~~~~~~~~~~~~  215 (245)
                      .++|+||||+++|++++|..||...+.......+........               ....+..  ..........+..+
T Consensus       195 ~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (343)
T cd07880         195 QTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLA  274 (343)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHH
Confidence            999999999999999999999987665444433322111100               0000000  00001114567889


Q ss_pred             HHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          216 WNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       216 ~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+++.+|++.||.+|||+.+++.||||+
T Consensus       275 ~~li~~~l~~dP~~R~t~~~~l~~~~~~  302 (343)
T cd07880         275 VNVLEKMLVLDAESRITAAEALAHPYFE  302 (343)
T ss_pred             HHHHHHHcCCChhhCCCHHHHhcCccHh
Confidence            9999999999999999999999999995

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=6.3e-34  Score=227.09  Aligned_cols=215  Identities=18%  Similarity=0.244  Sum_probs=158.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEe-CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMIS-QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ...+.+.+|+.++++++||||+++++++.. .+..++++|++. ++|.+++.                  ...+++..+.
T Consensus        51 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~------------------~~~~~~~~~~  111 (328)
T cd07856          51 VLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLT------------------SRPLEKQFIQ  111 (328)
T ss_pred             chhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHh------------------cCCCCHHHHH
Confidence            456778899999999999999999999865 456899999985 58866553                  2357778888


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-CCCccccccccCceecCCCCCCCchhhHH
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||.+...... ....+++.|+|||.+.+ ...++.++|+|
T Consensus       112 ~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Dv~  190 (328)
T cd07856         112 YFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLT-WQKYDVEVDIW  190 (328)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceeeec-cCCcCcHHHHH
Confidence            89999999999999999999999999999975        5555433221 12345788999998764 34578999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCC-----------Ccc----CCCC--CCCCCCCCcccccHHHHHHHHH
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK-----------STS----LQVA--PNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~-----------~~~----~~~~--~~~~~~~~~~~~~~~~~~li~~  221 (245)
                      |||+++|++++|+.||...........+......           ...    ....  .+.........++..+.++|.+
T Consensus       191 slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  270 (328)
T cd07856         191 SAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEK  270 (328)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHH
Confidence            9999999999999999875543222211111000           000    0000  0000001113467899999999


Q ss_pred             hcCCCCCCCccHHHHhhccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ||+.+|++|||+++++.||||.
T Consensus       271 ~l~~~P~~R~t~~ell~~~~~~  292 (328)
T cd07856         271 MLVFDPQKRISAAEALAHPYLA  292 (328)
T ss_pred             HcCCChhhCCCHHHHhcCCccc
Confidence            9999999999999999999985

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=9e-36  Score=245.35  Aligned_cols=205  Identities=20%  Similarity=0.284  Sum_probs=180.2

Q ss_pred             ccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            4 INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         4 ~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      -.-++++..+|+.|+.||.+.+||||+++-|........+||.|||++|+|+.+++.                ....|+.
T Consensus       667 ~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~----------------~DGqftv  730 (996)
T KOG0196|consen  667 AGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQ----------------NDGQFTV  730 (996)
T ss_pred             cCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhh----------------cCCceEe
Confidence            344678999999999999999999999999999889999999999999999887763                2356889


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC----Cc---cccccccCceecCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS----SS---ITTWAAAPEVVNFGD  148 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~----~~---~~~~y~aPE~~~~~~  148 (245)
                      -++..|++.|+.|+.||-+.++|||||.++|||++.        ||+++.......    ..   ....|.|||.+..  
T Consensus       731 iQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~--  808 (996)
T KOG0196|consen  731 IQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAY--  808 (996)
T ss_pred             ehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhh--
Confidence            999999999999999999999999999999999886        999986654441    11   1679999999998  


Q ss_pred             CCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++||||+|+++||+++ |..||.+..+.+.++.+....      +.+++       .+++..+.+|+..||+.|-
T Consensus       809 RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy------RLPpP-------mDCP~aL~qLMldCWqkdR  875 (996)
T KOG0196|consen  809 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY------RLPPP-------MDCPAALYQLMLDCWQKDR  875 (996)
T ss_pred             cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc------CCCCC-------CCCcHHHHHHHHHHHHHHh
Confidence            669999999999999999765 999999999999999988776      55555       7899999999999999999


Q ss_pred             CCCccHHHHhhc
Q 037274          228 AKRPAAEAQVLQ  239 (245)
Q Consensus       228 ~~Rpt~~~~l~~  239 (245)
                      .+||++++|+.+
T Consensus       876 ~~RP~F~qiV~~  887 (996)
T KOG0196|consen  876 NRRPKFAQIVST  887 (996)
T ss_pred             hcCCCHHHHHHH
Confidence            999999998754

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.5e-34  Score=232.12  Aligned_cols=213  Identities=21%  Similarity=0.286  Sum_probs=158.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ....+.+|+.++++++|+||+++++++...+      ..++++|++.. +|..+.                   ...+++
T Consensus        57 ~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~-------------------~~~~~~  116 (342)
T cd07879          57 FAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM-------------------GHPLSE  116 (342)
T ss_pred             chhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-CHHHHH-------------------cCCCCH
Confidence            4456889999999999999999999986543      46999999864 663322                   235788


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCch
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..+..++.|++.||+|||+.|++||||+|+||+++.        ||.+....... ...+++.|+|||.+.+ ...++.+
T Consensus       117 ~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~  195 (342)
T cd07879         117 DKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILN-WMHYNQT  195 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcC-ccccCch
Confidence            999999999999999999999999999999999976        66655432222 2345788999999864 2347899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc---------------CCCC--CCCCCCCCcccccHHHHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS---------------LQVA--PNEDTTHGTRTLSKNFWN  217 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------~~~~--~~~~~~~~~~~~~~~~~~  217 (245)
                      +|+||||+++|+|++|+.||.+.+.......+.........               ...+  ............+..+.+
T Consensus       196 ~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (342)
T cd07879         196 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVD  275 (342)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHH
Confidence            99999999999999999999886655544443332110000               0000  000000001246778999


Q ss_pred             HHHHhcCCCCCCCccHHHHhhccccc
Q 037274          218 MVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +|++||+.||.+||++++++.||||.
T Consensus       276 li~~~l~~dP~~R~~~~e~l~h~~f~  301 (342)
T cd07879         276 LLEKMLELDVDKRLTATEALEHPYFD  301 (342)
T ss_pred             HHHHHcCCChhhCcCHHHHhcCcchh
Confidence            99999999999999999999999985

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=1.7e-34  Score=226.61  Aligned_cols=208  Identities=18%  Similarity=0.180  Sum_probs=160.2

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+.+.+|+++++++ +||||+++++.+..++..++|+||+.+++|.+++..                 ...+++..+.
T Consensus        46 ~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~  108 (288)
T cd05583          46 KTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQ-----------------REHFTESEVR  108 (288)
T ss_pred             hHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhh-----------------cCCcCHHHHH
Confidence            3456788999999999 599999999999999999999999999999665531                 2457888999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||.+.......     ...++..|+|||.+.+.....+.+
T Consensus       109 ~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  188 (288)
T cd05583         109 VYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKA  188 (288)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcch
Confidence            99999999999999999999999999999975        56544322211     124578999999987633347889


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc--
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA--  232 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt--  232 (245)
                      +|+||||+++|+|++|..||...........+.......   ..       ..+..++..+.+++.+||+.+|++|||  
T Consensus       189 ~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~~~~l~~li~~~l~~~p~~R~t~~  258 (288)
T cd05583         189 VDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS---KP-------PFPKTMSAEARDFIQKLLEKDPKKRLGAN  258 (288)
T ss_pred             hhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc---CC-------CCCcccCHHHHHHHHHHhcCCHhhccCcc
Confidence            999999999999999999996533222222221111100   00       111457789999999999999999998  


Q ss_pred             -HHHHhhccccc
Q 037274          233 -AEAQVLQEMWH  243 (245)
Q Consensus       233 -~~~~l~~~~f~  243 (245)
                       +.++++||||+
T Consensus       259 ~~~~~l~~~~~~  270 (288)
T cd05583         259 GADEIKNHPFFQ  270 (288)
T ss_pred             hHHHHhcCcccc
Confidence             56779999986

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-34  Score=225.22  Aligned_cols=214  Identities=20%  Similarity=0.300  Sum_probs=160.5

Q ss_pred             HHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           12 AKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        12 ~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ....+|+..+++++ |+||+++++++..++..++|+||+ +|+|.+++..               .....+++..+..++
T Consensus        42 ~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~---------------~~~~~~~~~~~~~~~  105 (283)
T cd07830          42 CMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKD---------------RKGKPFSESVIRSII  105 (283)
T ss_pred             HHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHh---------------cccccCCHHHHHHHH
Confidence            34567999999999 999999999999999999999999 6788665542               113467899999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhHHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      .|++.||.|||++|++|+||+|+||+++.        ||.+......   ....++..|+|||.+.. ...++.++|+||
T Consensus       106 ~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~~Di~s  184 (283)
T cd07830         106 YQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLR-STSYSSPVDIWA  184 (283)
T ss_pred             HHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeec-CcCcCCccchhh
Confidence            99999999999999999999999999986        5554433221   12345778999998864 345789999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc--------------CCCC--CCCCCCCCcccccHHHHHHHHHhc
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS--------------LQVA--PNEDTTHGTRTLSKNFWNMVKICL  223 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------~~~~--~~~~~~~~~~~~~~~~~~li~~~l  223 (245)
                      ||++++++++|+.||......+..............              ...+  ............+..+.+++++||
T Consensus       185 ~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  264 (283)
T cd07830         185 LGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDML  264 (283)
T ss_pred             HHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhc
Confidence            999999999999999876655544433322111000              0000  000000001223678999999999


Q ss_pred             CCCCCCCccHHHHhhcccc
Q 037274          224 APDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       224 ~~~p~~Rpt~~~~l~~~~f  242 (245)
                      +.+|.+|||+.+++.||||
T Consensus       265 ~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         265 RWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccCcccCCCHHHHhhCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=8.8e-34  Score=227.66  Aligned_cols=219  Identities=16%  Similarity=0.249  Sum_probs=158.7

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeC-ceeEEEeeecccCCHHHHHhcCCCCC-------------------
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQ-RQLFYAEIACMIGSLDSIMTYRPLNS-------------------   65 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~-------------------   65 (245)
                      ..+....+.+|+.++.++ +|+||+++++++... +..++++||+++|+|.+++.......                   
T Consensus        50 ~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (343)
T cd05103          50 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGD  129 (343)
T ss_pred             ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccc
Confidence            345567789999999999 689999999987654 46899999999999999986432100                   


Q ss_pred             -hhhHHH------------------------------HhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCc
Q 037274           66 -PAATQL------------------------------IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGH  114 (245)
Q Consensus        66 -~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~n  114 (245)
                       ......                              .........+++..+..++.|++.||+|||++|++|+||||+|
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~N  209 (343)
T cd05103         130 ISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARN  209 (343)
T ss_pred             hhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCe
Confidence             000000                              0000012347888899999999999999999999999999999


Q ss_pred             eeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCc
Q 037274          115 ILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQD  179 (245)
Q Consensus       115 il~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~  179 (245)
                      |+++.        ||++.......      ...+++.|+|||.+.+  ..++.++|+||||+++|++++ |..||.....
T Consensus       210 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~  287 (343)
T cd05103         210 ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  287 (343)
T ss_pred             EEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCccc
Confidence            99975        77665432211      1223567999999876  568999999999999999996 8999976443


Q ss_pred             hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          180 LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ............     ...       .+...++++.+++..||+.+|.+|||+.++++|
T Consensus       288 ~~~~~~~~~~~~-----~~~-------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         288 DEEFCRRLKEGT-----RMR-------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             cHHHHHHHhccC-----CCC-------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            322222221110     000       113356789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.4e-33  Score=219.23  Aligned_cols=206  Identities=20%  Similarity=0.292  Sum_probs=161.6

Q ss_pred             cHHHHHHHHHHHHHHhh-CCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKH-LSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~-l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ......++.+|+.++.+ ++||||+++++.+..++..++++||+++++|.+++...             ......+++..
T Consensus        48 ~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~-------------~~~~~~~~~~~  114 (269)
T cd08528          48 RDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSL-------------KEKKQRFTEER  114 (269)
T ss_pred             chHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHH-------------HhccCCCCHHH
Confidence            34456678889998865 79999999999999999999999999999998776421             11235688899


Q ss_pred             HHHHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCc
Q 037274           86 LAIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ++.++.|++.||.|||+ .|++|+||+|+||+++.        ||.+......   ....++..|+|||.+.+  ..++.
T Consensus       115 ~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--~~~~~  192 (269)
T cd08528         115 IWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKN--EPYGE  192 (269)
T ss_pred             HHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcC--CCCch
Confidence            99999999999999996 68999999999999876        6665443322   23445888999999986  55899


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++|+||||+++|++++|..||..................      +      .....+++.+.+++.+||+.||++||++
T Consensus       193 ~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~------~~~~~~~~~l~~li~~cl~~~p~~Rp~~  260 (269)
T cd08528         193 KADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE------P------LPEGMYSEDVTDVITSCLTPDAEARPDI  260 (269)
T ss_pred             HHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC------c------CCcccCCHHHHHHHHHHCCCCCccCCCH
Confidence            999999999999999999999876554444333322110      0      0113567899999999999999999999


Q ss_pred             HHHhhc
Q 037274          234 EAQVLQ  239 (245)
Q Consensus       234 ~~~l~~  239 (245)
                      .++..+
T Consensus       261 ~e~~~~  266 (269)
T cd08528         261 IQVSAM  266 (269)
T ss_pred             HHHHHH
Confidence            998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.5e-34  Score=228.59  Aligned_cols=214  Identities=17%  Similarity=0.233  Sum_probs=158.3

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ...+.+.+|+.++++++|+||+++++++...      +..+++++++ +++|.+++.                  ...++
T Consensus        58 ~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~------------------~~~l~  118 (345)
T cd07877          58 IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK------------------CQKLT  118 (345)
T ss_pred             HHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHh------------------cCCCC
Confidence            3456788999999999999999999987543      3467888776 568866553                  23578


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCc
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +..++.++.|++.||.|||+.|++|+||||+||+++.        ||.+....... ...+++.|+|||.+.+ ...++.
T Consensus       119 ~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~  197 (345)
T cd07877         119 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN-WMHYNQ  197 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhC-ccCCCc
Confidence            8999999999999999999999999999999999986        66554332221 2345888999998764 345788


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC------------------CCCCCCCCCCCcccccHHH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL------------------QVAPNEDTTHGTRTLSKNF  215 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~  215 (245)
                      ++|+||||+++|++++|+.||...+.......+..........                  ..+... ........++++
T Consensus       198 ~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  276 (345)
T cd07877         198 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN-FANVFIGANPLA  276 (345)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcc-hhhhcCCCCHHH
Confidence            9999999999999999999997755544433332221100000                  000000 000112467889


Q ss_pred             HHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          216 WNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       216 ~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .++|..||+.||.+||++.+++.||||.
T Consensus       277 ~~li~~~L~~dp~~R~t~~e~l~h~~f~  304 (345)
T cd07877         277 VDLLEKMLVLDSDKRITAAQALAHAYFA  304 (345)
T ss_pred             HHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence            9999999999999999999999999985

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.1e-33  Score=223.48  Aligned_cols=200  Identities=18%  Similarity=0.262  Sum_probs=154.4

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ......+.+|+.+++.++||||+++++++... ..+++++++++|+|.+++..                ....+++..+.
T Consensus        50 ~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~----------------~~~~~~~~~~~  112 (303)
T cd05110          50 PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHE----------------HKDNIGSQLLL  112 (303)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHh----------------cccCCCHHHHH
Confidence            34455789999999999999999999988654 46799999999999776642                12357888899


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||.|||++|++|+||||+||+++.        ||.+.......      ...++..|+|||.+.+  ..++.
T Consensus       113 ~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~  190 (303)
T cd05110         113 NWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY--RKFTH  190 (303)
T ss_pred             HHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhcc--CCCCh
Confidence            99999999999999999999999999999965        66665432211      1223568999999876  66899


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|++++ |..||.+......... .....     ..+.       +...+..+.+++..||..+|++||+
T Consensus       191 ~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~-~~~~~-----~~~~-------~~~~~~~~~~li~~c~~~~p~~Rp~  257 (303)
T cd05110         191 QSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL-LEKGE-----RLPQ-------PPICTIDVYMVMVKCWMIDADSRPK  257 (303)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHCCC-----CCCC-------CCCCCHHHHHHHHHHcCCChhhCcC
Confidence            9999999999999987 8899977543333222 22110     1111       1346778999999999999999999


Q ss_pred             HHHHhhc
Q 037274          233 AEAQVLQ  239 (245)
Q Consensus       233 ~~~~l~~  239 (245)
                      +.++++.
T Consensus       258 ~~~l~~~  264 (303)
T cd05110         258 FKELAAE  264 (303)
T ss_pred             HHHHHHH
Confidence            9998763

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-34  Score=213.10  Aligned_cols=212  Identities=22%  Similarity=0.324  Sum_probs=170.5

Q ss_pred             ccccHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            4 INHQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         4 ~~~~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      .....+..+.+...+.++.+-. .|+||+.+|+|..+...++.||.+.. .++.+++.                -..+++
T Consensus       127 rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkr----------------ik~piP  189 (391)
T KOG0983|consen  127 RTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-CAEKLLKR----------------IKGPIP  189 (391)
T ss_pred             ccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHH----------------hcCCch
Confidence            3456677888889998877765 89999999999999888888888754 55444431                246699


Q ss_pred             HHHHHHHHHHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCC-CC
Q 037274           83 VDCLAIAHKETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFG-DD  149 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~-~~  149 (245)
                      +..+-.+...+++||.||-++ |++|||+||+|||++.        ||.+.....+.   ...|.+.|||||.+.-. ..
T Consensus       190 E~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~  269 (391)
T KOG0983|consen  190 ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKP  269 (391)
T ss_pred             HHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCCCC
Confidence            999999999999999999975 7999999999999997        77665444333   45679999999999853 46


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCC-CchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRR-QDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      .|+.++||||||+.++|++||..||.+. .+.+.+..+....+         +....  ..++|+.+.+|+..||..|+.
T Consensus       270 kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP---------P~L~~--~~gFSp~F~~fv~~CL~kd~r  338 (391)
T KOG0983|consen  270 KYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP---------PLLPG--HMGFSPDFQSFVKDCLTKDHR  338 (391)
T ss_pred             ccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC---------CCCCc--ccCcCHHHHHHHHHHhhcCcc
Confidence            7889999999999999999999999874 45667766665332         11111  145899999999999999999


Q ss_pred             CCccHHHHhhccccc
Q 037274          229 KRPAAEAQVLQEMWH  243 (245)
Q Consensus       229 ~Rpt~~~~l~~~~f~  243 (245)
                      +||...++++|||..
T Consensus       339 ~RP~Y~~Ll~h~Fi~  353 (391)
T KOG0983|consen  339 KRPKYNKLLEHPFIK  353 (391)
T ss_pred             cCcchHHHhcCccee
Confidence            999999999999854

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=5.8e-34  Score=224.43  Aligned_cols=208  Identities=23%  Similarity=0.382  Sum_probs=156.6

Q ss_pred             HHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ......+..|+.++.++. |+||+++++++.+++..++++|++.+ ++.+++..                ....+++..+
T Consensus        54 ~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~----------------~~~~l~~~~~  116 (296)
T cd06618          54 KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST-CLDKLLKR----------------IQGPIPEDIL  116 (296)
T ss_pred             hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc-CHHHHHHH----------------hcCCCCHHHH
Confidence            345566777887776665 99999999999999999999999864 77554431                1246888999


Q ss_pred             HHHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCC--CCCC
Q 037274           87 AIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGD--DYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~--~~~~  152 (245)
                      ..++.|++.|++|||+ .|++|+||+|+||+++.        ||.+.......   ...+++.|+|||.+.+..  ..++
T Consensus       117 ~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  196 (296)
T cd06618         117 GKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYD  196 (296)
T ss_pred             HHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccc
Confidence            9999999999999997 59999999999999976        66554332211   223467899999987522  3478


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|+||||+++|+|++|+.||..... .+.........    ....       .....++.++.+++.+||..||.+||
T Consensus       197 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rp  265 (296)
T cd06618         197 IRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE----PPSL-------PPNEGFSPDFCSFVDLCLTKDHRKRP  265 (296)
T ss_pred             cchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC----CCCC-------CCCCCCCHHHHHHHHHHccCChhhCC
Confidence            899999999999999999999976332 22222222211    0000       01134778999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      ++++++.|+||.
T Consensus       266 ~~~~il~~~~~~  277 (296)
T cd06618         266 KYRELLQHPFIR  277 (296)
T ss_pred             CHHHHhcChhhh
Confidence            999999999975

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=1.4e-33  Score=225.62  Aligned_cols=215  Identities=20%  Similarity=0.253  Sum_probs=158.0

Q ss_pred             HHHHHHHHHHHHhhC-CCCCeeeEEEEEEeC----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274           10 EYAKLAREIYRYKHL-SHPNIIPIYKTMISQ----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+.+.+|+.+++++ +||||+++++.+...    ...+++++++. ++|.+.+..                 ...+++.
T Consensus        44 ~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~-----------------~~~~~~~  105 (332)
T cd07857          44 LAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRS-----------------GQPLTDA  105 (332)
T ss_pred             hHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhc-----------------CCCCCHH
Confidence            456788999999999 599999999875432    34788888886 588665532                 3468899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC--------CCCccccccccCceecCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS--------SSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~  148 (245)
                      .+..++.|++.||.|||+.|++|+||||+||+++.        ||.+......        ....+++.|+|||.+.+ .
T Consensus       106 ~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~  184 (332)
T cd07857         106 HFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLS-F  184 (332)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhC-C
Confidence            99999999999999999999999999999999875        6665433211        12346889999998764 3


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc-----------------CCCCCCCCCCCCcccc
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS-----------------LQVAPNEDTTHGTRTL  211 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~  211 (245)
                      ..++.++|+||||+++|++++|..||...+.................                 ................
T Consensus       185 ~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (332)
T cd07857         185 QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNA  264 (332)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCC
Confidence            45789999999999999999999999876654444333322211000                 0000000000111335


Q ss_pred             cHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          212 SKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       212 ~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +..+.+++.+||+.||.+|||+.+++.|||++
T Consensus       265 ~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~  296 (332)
T cd07857         265 NPLALDLLEKLLAFDPTKRISVEEALEHPYLA  296 (332)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence            78899999999999999999999999999974

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.2e-33  Score=219.83  Aligned_cols=214  Identities=21%  Similarity=0.270  Sum_probs=153.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      .....+.+.+|++++++++||||+++++++..  ....++++||+++++|.+++..                ....+++.
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~l~~~  108 (284)
T cd05081          45 TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQK----------------HRERLDHR  108 (284)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHh----------------cCcCCCHH
Confidence            34556789999999999999999999998754  3468999999999999777642                12357889


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC-------CccccccccCceecCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS-------SSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~-------~~~~~~y~aPE~~~~~~~  149 (245)
                      .+..++.|++.||+|||++|++|+||||+||+++.        ||.+........       ..++..|+|||.+.+  .
T Consensus       109 ~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~  186 (284)
T cd05081         109 KLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTE--S  186 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhcc--C
Confidence            99999999999999999999999999999999975        666554322211       112345999999986  5


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC----CCCCCCCCCCCcccccHHHHHHHHHhcCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL----QVAPNEDTTHGTRTLSKNFWNMVKICLAP  225 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~  225 (245)
                      .++.++|+||||+++|++++|..++...... ...............    ..............++.++.+++.+||+.
T Consensus       187 ~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  265 (284)
T cd05081         187 KFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNN  265 (284)
T ss_pred             CcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccC
Confidence            6889999999999999999987765432211 000000000000000    00000000111255788999999999999


Q ss_pred             CCCCCccHHHHhhc
Q 037274          226 DPAKRPAAEAQVLQ  239 (245)
Q Consensus       226 ~p~~Rpt~~~~l~~  239 (245)
                      +|++|||+.++++.
T Consensus       266 ~p~~Rpt~~ei~~~  279 (284)
T cd05081         266 DPSQRPSFSELALQ  279 (284)
T ss_pred             ChhhCCCHHHHHHH
Confidence            99999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=2.4e-33  Score=218.33  Aligned_cols=206  Identities=18%  Similarity=0.338  Sum_probs=156.6

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ....+++.+|++++++++||||+++++++....      ..+++++|+.+|+|.+++.....           ......+
T Consensus        42 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~l  110 (273)
T cd05074          42 SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRI-----------GEEPFTL  110 (273)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcc-----------cCCCCCC
Confidence            456778999999999999999999999875432      24788999999999776642110           0112347


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~  147 (245)
                      ++..+..++.|++.||+|||+.|++|+||||+||+++.        ||.+.......      ...+++.|++||.+.. 
T Consensus       111 ~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-  189 (273)
T cd05074         111 PLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLAD-  189 (273)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhc-
Confidence            88899999999999999999999999999999999985        66555332211      2223568999999876 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ..++.++||||||+++|++++ |..||...+.......+....    ...         .....+..+.+++.+||+.+
T Consensus       190 -~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~----~~~---------~~~~~~~~~~~l~~~~l~~~  255 (273)
T cd05074         190 -NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN----RLK---------QPPDCLEDVYELMCQCWSPE  255 (273)
T ss_pred             -CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC----cCC---------CCCCCCHHHHHHHHHHcCCC
Confidence             568899999999999999998 889988765544433332211    000         11346789999999999999


Q ss_pred             CCCCccHHHHhhc
Q 037274          227 PAKRPAAEAQVLQ  239 (245)
Q Consensus       227 p~~Rpt~~~~l~~  239 (245)
                      |++||++.++++.
T Consensus       256 p~~Rps~~~~~~~  268 (273)
T cd05074         256 PKCRPSFQHLRDQ  268 (273)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999998764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-34  Score=231.73  Aligned_cols=205  Identities=15%  Similarity=0.253  Sum_probs=170.0

Q ss_pred             cccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      -+..+....++|+.|+.+|+.++|||+|+++|.|..+..+|||+||+..|+|.++++.+               .+..++
T Consensus       299 tLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRec---------------nr~ev~  363 (1157)
T KOG4278|consen  299 TLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLREC---------------NRSEVP  363 (1157)
T ss_pred             hhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHh---------------chhhcc
Confidence            34455667899999999999999999999999999999999999999999997777632               234567


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCc--c---ccccccCceecCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSS--I---TTWAAAPEVVNFGDD  149 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~--~---~~~y~aPE~~~~~~~  149 (245)
                      .-.++.|+.||..|+.||..++++||||-..|+|++.        ||+++.........  |   ..-|.|||-+..  .
T Consensus       364 avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAy--N  441 (1157)
T KOG4278|consen  364 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--N  441 (1157)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccc--c
Confidence            7788999999999999999999999999999999886        99888766554221  1   678999999987  7


Q ss_pred             CCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      .++.++|||+||++|||+.| |-.||.+-+....+..+....      ++..+       .++++.+.+|++.||+..|.
T Consensus       442 tFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy------RM~~P-------eGCPpkVYeLMraCW~WsPs  508 (1157)
T KOG4278|consen  442 TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY------RMDGP-------EGCPPKVYELMRACWNWSPS  508 (1157)
T ss_pred             ccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc------cccCC-------CCCCHHHHHHHHHHhcCCcc
Confidence            79999999999999999987 778888855444443333222      33222       78999999999999999999


Q ss_pred             CCccHHHHh
Q 037274          229 KRPAAEAQV  237 (245)
Q Consensus       229 ~Rpt~~~~l  237 (245)
                      +||++.++-
T Consensus       509 DRPsFaeiH  517 (1157)
T KOG4278|consen  509 DRPSFAEIH  517 (1157)
T ss_pred             cCccHHHHH
Confidence            999999874

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3e-33  Score=218.95  Aligned_cols=203  Identities=21%  Similarity=0.314  Sum_probs=154.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ...+.+.+|+++++.++|+||+++++++..  ....++++||+++++|.+++...                ...+++..+
T Consensus        48 ~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~----------------~~~~~~~~~  111 (284)
T cd05038          48 QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRH----------------RDQINLKRL  111 (284)
T ss_pred             HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhC----------------ccccCHHHH
Confidence            357889999999999999999999999877  55789999999999997777521                235888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ..++.|++.||+|||++|++|+||+|+||+++.        ||.+.......       ...++..|+|||...+  ..+
T Consensus       112 ~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--~~~  189 (284)
T cd05038         112 LLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRT--SKF  189 (284)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHcc--CCC
Confidence            999999999999999999999999999999976        55554433111       1223456999999876  568


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHH-----------HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDI-----------MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  220 (245)
                      +.++|+||||+++++|++|..|+........           ............  .       ...+..++.++.+++.
T Consensus       190 ~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~li~  260 (284)
T cd05038         190 SSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE--R-------LPRPPSCPDEVYDLMK  260 (284)
T ss_pred             CcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCC--c-------CCCCccCCHHHHHHHH
Confidence            8999999999999999999999865322110           111111110000  0       0112456789999999


Q ss_pred             HhcCCCCCCCccHHHHhh
Q 037274          221 ICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~  238 (245)
                      +||+.+|.+|||+.++++
T Consensus       261 ~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         261 LCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHhccChhhCCCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-34  Score=196.88  Aligned_cols=216  Identities=19%  Similarity=0.250  Sum_probs=173.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      .-....+|+-+++.|+|+|||++++...++..+.+|+|+|.. +|..++++                ....++.+.+..+
T Consensus        44 vpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-dlkkyfds----------------lng~~d~~~~rsf  106 (292)
T KOG0662|consen   44 VPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDS----------------LNGDLDPEIVRSF  106 (292)
T ss_pred             CcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-HHHHHHHh----------------cCCcCCHHHHHHH
Confidence            345688999999999999999999999999999999999986 88777764                2467888999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|+|+.++.||||||+|.+++.        ||+++..+..-    ....|.+|.+|.++.+ ..-|+...|+
T Consensus       107 mlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfg-akly~tsidm  185 (292)
T KOG0662|consen  107 MLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-AKLYSTSIDM  185 (292)
T ss_pred             HHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeee-eehhccchHh
Confidence            999999999999999999999999999987        77666544432    2344999999999986 5568999999


Q ss_pred             HHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCC--------CCCCc-------ccccHHHHHHHHH
Q 037274          158 WLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNED--------TTHGT-------RTLSKNFWNMVKI  221 (245)
Q Consensus       158 wslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-------~~~~~~~~~li~~  221 (245)
                      ||-||++.|+.. |++.|.+.+..+...+++.........+.+....        .....       ..++..-++++.+
T Consensus       186 wsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqk  265 (292)
T KOG0662|consen  186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQK  265 (292)
T ss_pred             hhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHH
Confidence            999999999986 7788888888888888887765443333222110        00001       2233456899999


Q ss_pred             hcCCCCCCCccHHHHhhccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++.-+|.+|.++++.++||||.
T Consensus       266 ll~cnp~qrisaeaalqhpyf~  287 (292)
T KOG0662|consen  266 LLKCNPAQRISAEAALQHPYFS  287 (292)
T ss_pred             HhccCcccccCHHHHhcCcccc
Confidence            9999999999999999999984

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=7e-34  Score=227.82  Aligned_cols=209  Identities=16%  Similarity=0.225  Sum_probs=166.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +.....+|.+|+++|.+|+||||++++|.|..++.+|+++||+++|+|.+++.....               ....-...
T Consensus       575 ~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~ahea---------------pt~~t~~~  639 (807)
T KOG1094|consen  575 TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHEL---------------PTAETAPG  639 (807)
T ss_pred             chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccC---------------cccccchh
Confidence            344568899999999999999999999999999999999999999999887763211               11233344


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCcc------ccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSI------TTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~------~~~y~aPE~~~~~~~~~~  152 (245)
                      ..|+.||+.|++||.+.++|||||.+.|+|++.        ||.++....+.....      ...|||||.+.-  ..++
T Consensus       640 vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsill--gkFt  717 (807)
T KOG1094|consen  640 VSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILL--GKFT  717 (807)
T ss_pred             HHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHh--cccc
Confidence            559999999999999999999999999999987        777765555443322      689999999998  5599


Q ss_pred             chhhHHHHHHHHHHHhh--CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          153 CKSDIWLIGITALQFPC--GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +++|+|+||+++||+++  ...||....+.+.......-...+.....      ...+..++..+.+++-.||..|-.+|
T Consensus       718 taSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~------l~~P~~cp~~lyelml~Cw~~es~~R  791 (807)
T KOG1094|consen  718 TASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV------LSRPPACPQGLYELMLRCWRRESEQR  791 (807)
T ss_pred             chhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee------ccCCCcCcHHHHHHHHHHhchhhhcC
Confidence            99999999999999865  67899987777766554433322222111      12236688999999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      |+++++-.
T Consensus       792 PsFe~lh~  799 (807)
T KOG1094|consen  792 PSFEQLHL  799 (807)
T ss_pred             CCHHHHHH
Confidence            99999754

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.3e-34  Score=209.44  Aligned_cols=212  Identities=18%  Similarity=0.267  Sum_probs=163.0

Q ss_pred             HHHHHHHHHhhCCCCCeeeEEEEEEe--------CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274           13 KLAREIYRYKHLSHPNIIPIYKTMIS--------QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~Iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ...+|+.+|..|+|+|++.+++.|.+        ...+++|+.+|+. +|..++..                ....++..
T Consensus        62 talreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn----------------~~vr~sls  124 (376)
T KOG0669|consen   62 TALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSN----------------RKVRFSLS  124 (376)
T ss_pred             HHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcC----------------ccccccHH
Confidence            35689999999999999999887743        2348999999986 77554431                23568999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC--------CccccccccCceecCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS--------SSITTWAAAPEVVNFGD  148 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~--------~~~~~~y~aPE~~~~~~  148 (245)
                      ++..++.+++.||.|+|.+.|+|||+||.|+|++.        ||+++..+....        ...|.+|.+||.+.+ .
T Consensus       125 ~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG-~  203 (376)
T KOG0669|consen  125 EIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLG-D  203 (376)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhc-c
Confidence            99999999999999999999999999999999987        888755444332        222899999999996 6


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCC----------------------CCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNED----------------------TTH  206 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~  206 (245)
                      ..++++.|+|+-||++.+||+|.+.+.++++...+..+......... .+.+...                      ...
T Consensus       204 r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk-evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~  282 (376)
T KOG0669|consen  204 REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK-EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRL  282 (376)
T ss_pred             cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc-ccCCCcccchHHHhccCCCCCcchhhhhhhhc
Confidence            78999999999999999999999999998887766555332211110 1100000                      000


Q ss_pred             CcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          207 GTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       207 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+..-.++..++++.+|..||.+|++++++++|+||+
T Consensus       283 kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~  319 (376)
T KOG0669|consen  283 KPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFW  319 (376)
T ss_pred             ccccCChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence            0122245778999999999999999999999999996

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=6.2e-34  Score=212.73  Aligned_cols=218  Identities=18%  Similarity=0.235  Sum_probs=165.6

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEe-CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMIS-QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ...-+|+.+++.|+|||++.+...+.+ +...++++||.+. +|.+.|+.           .. ......++...+..++
T Consensus        72 ~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~f-----------Hr-~~~~~~lp~~mvKsil  138 (438)
T KOG0666|consen   72 MSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKF-----------HR-ASKAKQLPRSMVKSIL  138 (438)
T ss_pred             HHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHH-----------hc-cchhccCCHHHHHHHH
Confidence            345689999999999999999988877 7789999999997 88787752           22 2223578999999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc------------ccCccccccC-------CCCccccccccCceecCCCCCC
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWIS-------SSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      .||+.|++|||++=++||||||.|||+..            +|+++.....       +....|.+|.|||++.+ ...|
T Consensus       139 wQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLG-a~hY  217 (438)
T KOG0666|consen  139 WQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLG-ARHY  217 (438)
T ss_pred             HHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcc-cccc
Confidence            99999999999999999999999999875            5655543322       23344999999999996 6679


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCc---------hHHHHHHHhcCCCCccCCCCCCCC-------------CCCCc-
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQD---------LDIMTKMLMKQPKSTSLQVAPNED-------------TTHGT-  208 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-  208 (245)
                      +.+.||||.||++.|+++..+.|.+...         .+.+.+++...........+.-..             ....+ 
T Consensus       218 T~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~  297 (438)
T KOG0666|consen  218 TKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNV  297 (438)
T ss_pred             cchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcc
Confidence            9999999999999999999988876322         234555655543333222221100             00000 


Q ss_pred             ---------ccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          209 ---------RTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       209 ---------~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                               ..-++...+++.+||..||.+|.|+++.++|+||.
T Consensus       298 sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~  341 (438)
T KOG0666|consen  298 SLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFT  341 (438)
T ss_pred             hHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccc
Confidence                     12344578999999999999999999999999995

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=8.9e-33  Score=211.06  Aligned_cols=203  Identities=23%  Similarity=0.336  Sum_probs=162.6

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|++.+++++|+||+++++.+......++++|++++++|.+++..                 ...+++..+..++
T Consensus        31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~~   93 (244)
T smart00220       31 RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK-----------------RGRLSEDEARFYA   93 (244)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh-----------------ccCCCHHHHHHHH
Confidence            68899999999999999999999999988999999999999999777652                 1227888999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhHHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      .+++.++.+||+.+++|+||+|+||+++.        ||.+......   ....++..|+|||...+  ..++.++|+||
T Consensus        94 ~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~--~~~~~~~Di~s  171 (244)
T smart00220       94 RQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLG--KGYGKAVDVWS  171 (244)
T ss_pred             HHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHcc--CCCCchhhHHH
Confidence            99999999999999999999999999986        4444433322   23445788999999976  55788999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ||++++++++|..||....................          ......++.++.+++.+|+..+|.+||++.++++|
T Consensus       172 lG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~  241 (244)
T smart00220      172 LGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF----------PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQH  241 (244)
T ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC----------ccccccCCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence            99999999999999987433333333222211000          00001277899999999999999999999999999


Q ss_pred             ccc
Q 037274          240 EMW  242 (245)
Q Consensus       240 ~~f  242 (245)
                      |||
T Consensus       242 ~~~  244 (244)
T smart00220      242 PFF  244 (244)
T ss_pred             CCC
Confidence            997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-33  Score=233.26  Aligned_cols=210  Identities=24%  Similarity=0.412  Sum_probs=171.0

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEe-----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMIS-----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      ..+..+++..|.++++.+ .|||++.+||++..     ++++|+|||||.+||..|+++..               ....
T Consensus        55 ~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~---------------~g~r  119 (953)
T KOG0587|consen   55 TEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNT---------------KGNR  119 (953)
T ss_pred             CccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhh---------------cccc
Confidence            345567788899999988 59999999999854     46799999999999998888632               2567


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCC-
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFG-  147 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~-  147 (245)
                      +.|..+..|++.++.|+.+||.+.++|||+|-.|||++.        ||.+.....    ..+..|||.|||||++... 
T Consensus       120 l~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e  199 (953)
T KOG0587|consen  120 LKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDE  199 (953)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeeccc
Confidence            899999999999999999999999999999999999987        776554433    2367789999999999862 


Q ss_pred             --CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCC
Q 037274          148 --DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP  225 (245)
Q Consensus       148 --~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  225 (245)
                        ...|+.++|+||||++..||..|.+|+.+.-   .+..++...      +.+++.  ...+..++.++.++|+.||..
T Consensus       200 ~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH---PmraLF~Ip------RNPPPk--Lkrp~kWs~~FndFIs~cL~K  268 (953)
T KOG0587|consen  200 SPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH---PMRALFLIP------RNPPPK--LKRPKKWSKKFNDFISTCLVK  268 (953)
T ss_pred             CCCCCcccccchhhccceeehhcCCCCCccCcc---hhhhhccCC------CCCCcc--ccchhhHHHHHHHHHHHHHhh
Confidence              3457789999999999999999999998843   333333332      222222  222378899999999999999


Q ss_pred             CCCCCccHHHHhhcccc
Q 037274          226 DPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       226 ~p~~Rpt~~~~l~~~~f  242 (245)
                      |-.+||+..++++|||-
T Consensus       269 d~e~RP~~~~ll~hpFi  285 (953)
T KOG0587|consen  269 DYEQRPSTEELLKHPFI  285 (953)
T ss_pred             ccccCcchhhhccCCcc
Confidence            99999999999999983

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-34  Score=227.29  Aligned_cols=206  Identities=17%  Similarity=0.212  Sum_probs=181.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..++.+.+..|-++|.....|.||++|-.|.++...|++||-|-||.|-..++                 .+.+|+....
T Consensus       460 dtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLr-----------------dRg~Fdd~ta  522 (732)
T KOG0614|consen  460 DTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILR-----------------DRGSFDDYTA  522 (732)
T ss_pred             chhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhh-----------------hcCCcccchh
Confidence            45677889999999999999999999999999999999999999999944443                 2577999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCCchh
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ..++.-+++|+.|||.+||+.|||||+|.+++.        ||+++....+.   +.+|||.|.|||.+..  ...+.++
T Consensus       523 rF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILn--KGHD~av  600 (732)
T KOG0614|consen  523 RFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILN--KGHDRAV  600 (732)
T ss_pred             hhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhc--cCcchhh
Confidence            999999999999999999999999999999987        88888777665   6889999999999987  6688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc---
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA---  232 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---  232 (245)
                      |.||||+++||+++|.+||.+.+....++.+...+...            .++..++....++|+++...+|.+|..   
T Consensus       601 DyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i------------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~  668 (732)
T KOG0614|consen  601 DYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI------------EFPRRITKTATDLIKKLCRDNPTERLGYQK  668 (732)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh------------hcccccchhHHHHHHHHHhcCcHhhhcccc
Confidence            99999999999999999999998888888887666221            122667888999999999999999985   


Q ss_pred             --HHHHhhccccc
Q 037274          233 --AEAQVLQEMWH  243 (245)
Q Consensus       233 --~~~~l~~~~f~  243 (245)
                        +.+|-.|.||.
T Consensus       669 ~gI~DIkkH~Wf~  681 (732)
T KOG0614|consen  669 GGINDIKKHRWFE  681 (732)
T ss_pred             CChHHHHhhhhhh
Confidence              89999999973

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-34  Score=228.25  Aligned_cols=211  Identities=17%  Similarity=0.196  Sum_probs=175.0

Q ss_pred             cccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      |+....++.+++.+|+.+|+++.||.||.+-..|++.+..++|||.+.|.-|+..+.                +.+.+++
T Consensus       599 KlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILS----------------sEkgRL~  662 (888)
T KOG4236|consen  599 KLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILS----------------SEKGRLP  662 (888)
T ss_pred             cccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHH----------------hhcccch
Confidence            445566777999999999999999999999999999999999999998644433332                3467899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~  148 (245)
                      +...+.+..||+.||.|||.++|||.||||+|||+..           ||.++.+...+   ...|||.|+|||++..  
T Consensus       663 er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrn--  740 (888)
T KOG4236|consen  663 ERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRN--  740 (888)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhh--
Confidence            9999999999999999999999999999999999986           88888777665   4567999999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ..|+..-|+||+|+++|--+.|..||..+.+  ...++...          ....+..+...++++..++|+.+|+..-.
T Consensus       741 kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNA----------aFMyPp~PW~eis~~AidlIn~LLqVkm~  808 (888)
T KOG4236|consen  741 KGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNA----------AFMYPPNPWSEISPEAIDLINNLLQVKMR  808 (888)
T ss_pred             ccccccccceeeeEEEEEEecccccCCCccc--hhHHhhcc----------ccccCCCchhhcCHHHHHHHHHHHHHHHH
Confidence            7799999999999999999999999987443  22222111          11122233377899999999999999999


Q ss_pred             CCccHHHHhhccccc
Q 037274          229 KRPAAEAQVLQEMWH  243 (245)
Q Consensus       229 ~Rpt~~~~l~~~~f~  243 (245)
                      +|.|.+.-+.|||-+
T Consensus       809 kRysvdk~lsh~Wlq  823 (888)
T KOG4236|consen  809 KRYSVDKSLSHPWLQ  823 (888)
T ss_pred             HhcchHhhccchhhh
Confidence            999999999999953

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-33  Score=234.52  Aligned_cols=207  Identities=19%  Similarity=0.208  Sum_probs=155.8

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+..+-.++||+.|+.- +|||||++|+.-.++...|+..|.|.. +|.++++.. .         ........   -..
T Consensus       543 ~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~-~---------~d~~~~~~---i~~  608 (903)
T KOG1027|consen  543 EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESS-G---------LDVEMQSD---IDP  608 (903)
T ss_pred             hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhcc-c---------cchhhccc---ccH
Confidence            45566788999999888 599999999988888899999999985 999998742 0         00000111   334


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc-------------ccCccccccCC-------CCccccccccCceecC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------------FNDDTRNWISS-------SSSITTWAAAPEVVNF  146 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~  146 (245)
                      +..+.|+++||++||+.+||||||||.||||+.             ||+++....+.       ...||-+|.|||++..
T Consensus       609 ~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~  688 (903)
T KOG1027|consen  609 ISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLRE  688 (903)
T ss_pred             HHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhc
Confidence            567799999999999999999999999999875             88877665444       3456999999999997


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhC-CCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCC
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCG-GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP  225 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  225 (245)
                        ..-+..+|||||||++|++++| ..||.+.-..+.     .......+.-.-.        .....+..++|.+|+.+
T Consensus       689 --~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-----NIl~~~~~L~~L~--------~~~d~eA~dLI~~ml~~  753 (903)
T KOG1027|consen  689 --DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-----NILTGNYTLVHLE--------PLPDCEAKDLISRMLNP  753 (903)
T ss_pred             --cccCcccchhhcCceEEEEecCCccCCCchHHhhh-----hhhcCccceeeec--------cCchHHHHHHHHHhcCC
Confidence              4456799999999999999986 789987433222     1111111110000        00111889999999999


Q ss_pred             CCCCCccHHHHhhccccc
Q 037274          226 DPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       226 ~p~~Rpt~~~~l~~~~f~  243 (245)
                      +|..||++.+++.||+|+
T Consensus       754 dP~~RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  754 DPQLRPSATDVLNHPLFW  771 (903)
T ss_pred             CcccCCCHHHHhCCCccC
Confidence            999999999999999996

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=7e-33  Score=249.22  Aligned_cols=203  Identities=17%  Similarity=0.163  Sum_probs=147.4

Q ss_pred             HHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHH
Q 037274           15 AREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETL   94 (245)
Q Consensus        15 ~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~   94 (245)
                      ..|++.+++++||||++++|++.+++..++||||+++|+|.++++                    .+++.....++.|++
T Consensus       731 ~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~--------------------~l~~~~~~~i~~~ia  790 (968)
T PLN00113        731 SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR--------------------NLSWERRRKIAIGIA  790 (968)
T ss_pred             HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh--------------------cCCHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999999977664                    267788899999999


Q ss_pred             HHHHHHH---hCCcccccCCCCceeccc-------ccCccccccCCCCccccccccCceecCCCCCCCchhhHHHHHHHH
Q 037274           95 KGLSYLQ---GEGLFHKNISAGHILHNI-------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITA  164 (245)
Q Consensus        95 ~~l~~lh---~~~ivH~dlkp~nil~~~-------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l  164 (245)
                      .||+|||   +.+++||||||+||+++.       ++............+++.|+|||++.+  ..++.++|||||||++
T Consensus       791 ~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~sDv~S~Gvvl  868 (968)
T PLN00113        791 KALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRET--KDITEKSDIYGFGLIL  868 (968)
T ss_pred             HHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccC--CCCCcccchhhHHHHH
Confidence            9999999   669999999999999986       222222222223456799999999987  6689999999999999


Q ss_pred             HHHhhCCCCCCCCCc--hHHHHHHHhcCCCCccCCCCCCCC--CCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          165 LQFPCGGLPVSRRQD--LDIMTKMLMKQPKSTSLQVAPNED--TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       165 ~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      |||++|+.||.....  ....................++..  ..........++.+++.+||+.||++|||+.++++.
T Consensus       869 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        869 IELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            999999999854221  111111111110000000001100  001112233467889999999999999999998764

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-33  Score=241.04  Aligned_cols=206  Identities=18%  Similarity=0.206  Sum_probs=171.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ...-|..|-.+|..-+.+=|+.++.+|.+++.+|+||||++||+|-.++.               .  ...++++.+.++
T Consensus       118 ~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlS---------------k--~~~~pE~~ArFY  180 (1317)
T KOG0612|consen  118 ETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLS---------------K--FDRLPEDWARFY  180 (1317)
T ss_pred             hHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHh---------------h--cCCChHHHHHHH
Confidence            34567888899999899999999999999999999999999999966654               2  236999999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc-----cCCCCccccccccCceecC---CCCCCCc
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW-----ISSSSSITTWAAAPEVVNF---GDDYYSC  153 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~-----~~~~~~~~~~y~aPE~~~~---~~~~~~~  153 (245)
                      +..|+.||.-+|+.|+|||||||+|||++.        ||......     ..+.-+|||-|.+||++..   ++..|+.
T Consensus       181 ~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~  260 (1317)
T KOG0612|consen  181 TAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGR  260 (1317)
T ss_pred             HHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCC
Confidence            999999999999999999999999999998        55433332     1225678999999999874   3467999


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-  232 (245)
                      .+|-||+||++|||++|..||...+.-+.+..++...   ..+..|+.       ..+|++.++||.+.+. +|+.|.. 
T Consensus       261 ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk---~~l~FP~~-------~~VSeeakdLI~~ll~-~~e~RLgr  329 (1317)
T KOG0612|consen  261 ECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK---ESLSFPDE-------TDVSEEAKDLIEALLC-DREVRLGR  329 (1317)
T ss_pred             ccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh---hhcCCCcc-------cccCHHHHHHHHHHhc-Chhhhccc
Confidence            9999999999999999999999988888888877652   12222221       4589999999999877 5888888 


Q ss_pred             --HHHHhhccccc
Q 037274          233 --AEAQVLQEMWH  243 (245)
Q Consensus       233 --~~~~l~~~~f~  243 (245)
                        ++++..||||.
T Consensus       330 ngiedik~HpFF~  342 (1317)
T KOG0612|consen  330 NGIEDIKNHPFFE  342 (1317)
T ss_pred             ccHHHHHhCcccc
Confidence              99999999995

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-33  Score=212.44  Aligned_cols=204  Identities=20%  Similarity=0.260  Sum_probs=172.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+.......|-++|+..+||.+..+..+|.+.+.+|.||||+.||.|.-.+.                 ....+++.-.
T Consensus       208 akdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLs-----------------rer~FsE~Rt  270 (516)
T KOG0690|consen  208 AKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLS-----------------RERVFSEDRT  270 (516)
T ss_pred             ehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehh-----------------hhhcccchhh
Confidence            34566777889999999999999999888999999999999999999933332                 2456888889


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..+...|+.||.|||+++||.||||.+|.+++.        ||+.+....    ..+.+|||.|+|||++..  ..|+.+
T Consensus       271 RFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleD--nDYgra  348 (516)
T KOG0690|consen  271 RFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLED--NDYGRA  348 (516)
T ss_pred             hhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhcc--ccccce
Confidence            999999999999999999999999999999887        888764433    337889999999999998  779999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---  231 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---  231 (245)
                      +|-|.+|+++|||++|+.||...+.......+.....              .++..++++.+.++..+|..||.+|.   
T Consensus       349 VDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~--------------kFPr~ls~eAktLLsGLL~kdP~kRLGgG  414 (516)
T KOG0690|consen  349 VDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL--------------KFPRTLSPEAKTLLSGLLKKDPKKRLGGG  414 (516)
T ss_pred             eehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc--------------cCCccCCHHHHHHHHHHhhcChHhhcCCC
Confidence            9999999999999999999998766655555443321              22377899999999999999999998   


Q ss_pred             --cHHHHhhccccc
Q 037274          232 --AAEAQVLQEMWH  243 (245)
Q Consensus       232 --t~~~~l~~~~f~  243 (245)
                        .+.++..|+||.
T Consensus       415 pdDakEi~~h~FF~  428 (516)
T KOG0690|consen  415 PDDAKEIMRHRFFA  428 (516)
T ss_pred             chhHHHHHhhhhhc
Confidence              578899999985

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-33  Score=209.65  Aligned_cols=213  Identities=17%  Similarity=0.258  Sum_probs=163.0

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ...+...+|..++..++|+||++++.+|.-.      ...|+|||++.. +|..++.                   -.++
T Consensus        57 ~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~-------------------~elD  116 (369)
T KOG0665|consen   57 THAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVIL-------------------MELD  116 (369)
T ss_pred             ccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHH-------------------Hhcc
Confidence            4567788999999999999999999988432      348999999985 8866653                   2356


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      -..+..++.|++.|+.|||+.||+||||||+||++..        ||++......   .....|-.|.|||++.+  ..+
T Consensus       117 H~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~--~~~  194 (369)
T KOG0665|consen  117 HETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILG--MGY  194 (369)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheec--cCC
Confidence            6788899999999999999999999999999999876        8877655443   23455889999999998  669


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc----------------------CC----CCCCC--C
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS----------------------LQ----VAPNE--D  203 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~----~~~~~--~  203 (245)
                      ...+||||+||++.||++|+..|.+.+..+.+.++.........                      ..    .++..  .
T Consensus       195 ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~  274 (369)
T KOG0665|consen  195 KENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPV  274 (369)
T ss_pred             cccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccc
Confidence            99999999999999999999999886666665554333221100                      00    00000  0


Q ss_pred             CCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          204 TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       204 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ....+..-+...++++.+||..+|++|.+++++|+|||++
T Consensus       275 ~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  275 VLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             cccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence            0111123345679999999999999999999999999985

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-33  Score=226.28  Aligned_cols=198  Identities=21%  Similarity=0.324  Sum_probs=167.2

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ...+|.+|+.+|.+|+|+|++++||...+ ....+|+|.++.|+|.+-++               ...+..+....+..+
T Consensus       154 ~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLr---------------ka~~~~llv~~Lcdy  217 (1039)
T KOG0199|consen  154 IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLR---------------KAKKAILLVSRLCDY  217 (1039)
T ss_pred             hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHh---------------hccccceeHHHHHHH
Confidence            78899999999999999999999999877 67899999999999966554               233567888999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC-------CccccccccCceecCCCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS-------SSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.||+.|+.||.++++|||||-..|+|+..        ||+.+.......       ......|+|||.+..  ..++.+
T Consensus       218 a~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh--~kFSha  295 (1039)
T KOG0199|consen  218 AMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRH--RKFSHA  295 (1039)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcc--cccccc
Confidence            999999999999999999999999999764        888776655442       222678999999998  669999


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +|||++||++|||++ |..||-+......++.+....      ..+.       +..+++.+.+++..||..+|.+|||+
T Consensus       296 SDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e------rLpR-------Pk~csedIY~imk~cWah~paDRptF  362 (1039)
T KOG0199|consen  296 SDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE------RLPR-------PKYCSEDIYQIMKNCWAHNPADRPTF  362 (1039)
T ss_pred             chhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc------cCCC-------CCCChHHHHHHHHHhccCCccccccH
Confidence            999999999999987 778999988888777665222      2222       26789999999999999999999999


Q ss_pred             HHHhh
Q 037274          234 EAQVL  238 (245)
Q Consensus       234 ~~~l~  238 (245)
                      .+|..
T Consensus       363 sair~  367 (1039)
T KOG0199|consen  363 SAIRE  367 (1039)
T ss_pred             HHHHH
Confidence            98853

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=7e-32  Score=232.47  Aligned_cols=95  Identities=15%  Similarity=0.209  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ......+..|+.+++.++|+||+++++.+...+..|+||||+.+++|.+++..                 ...+++..++
T Consensus        45 ~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~-----------------~~~l~~~~~~  107 (669)
T cd05610          45 KNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHI-----------------YGYFDEEMAV  107 (669)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHh-----------------cCCCCHHHHH
Confidence            34457899999999999999999999999999999999999999999776642                 2357788899


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      .++.||+.||.|||+.||+||||||+|||++.
T Consensus       108 ~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~  139 (669)
T cd05610         108 KYISEVALALDYLHRHGIIHRDLKPDNMLISN  139 (669)
T ss_pred             HHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC
Confidence            99999999999999999999999999999854

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-32  Score=215.27  Aligned_cols=211  Identities=20%  Similarity=0.254  Sum_probs=166.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEE-eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMI-SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .+.-.+..-+|.++.+.|.||.||++|++|. +.+.+|-|+|||+|.+|+=+++.                 ...+++.+
T Consensus       507 KeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQ-----------------hklmSEKE  569 (775)
T KOG1151|consen  507 KENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQ-----------------HKLMSEKE  569 (775)
T ss_pred             hhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHh-----------------hhhhhHHH
Confidence            3345566788999999999999999999985 45679999999999999555542                 45688999


Q ss_pred             HHHHHHHHHHHHHHHHhC--CcccccCCCCceeccc-----------ccCccccccCC-----------CCccccccccC
Q 037274           86 LAIAHKETLKGLSYLQGE--GLFHKNISAGHILHNI-----------FNDDTRNWISS-----------SSSITTWAAAP  141 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~--~ivH~dlkp~nil~~~-----------f~~~~~~~~~~-----------~~~~~~~y~aP  141 (245)
                      ...|+.||+.||.||...  .|+|-||||.|||+-.           ||+++.....+           ...||.+|++|
T Consensus       570 ARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPP  649 (775)
T KOG1151|consen  570 ARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPP  649 (775)
T ss_pred             HHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCc
Confidence            999999999999999976  5999999999999754           89887665443           34569999999


Q ss_pred             ceecCC--CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCch-HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHH
Q 037274          142 EVVNFG--DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL-DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM  218 (245)
Q Consensus       142 E~~~~~--~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  218 (245)
                      |.+.-|  .+..+.++||||+||++|++++|+-||..+... +.++.-.-...++..+  ++       ...++.+..+|
T Consensus       650 EcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqF--P~-------KPvVsseAkaF  720 (775)
T KOG1151|consen  650 ECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQF--PP-------KPVVSSEAKAF  720 (775)
T ss_pred             ceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccC--CC-------CCccCHHHHHH
Confidence            998865  456789999999999999999999999874332 2222211111112222  11       14578899999


Q ss_pred             HHHhcCCCCCCCccHHHHhhccccc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      |++||++.-++|....++..||+|.
T Consensus       721 IRRCLaYRKeDR~DV~qLA~dpyll  745 (775)
T KOG1151|consen  721 IRRCLAYRKEDRIDVQQLACDPYLL  745 (775)
T ss_pred             HHHHHHhhhhhhhhHHHHccCcccc
Confidence            9999999999999999999999984

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.98  E-value=2e-31  Score=209.75  Aligned_cols=196  Identities=14%  Similarity=0.088  Sum_probs=139.8

Q ss_pred             HHHHHHhhCCCCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           16 REIYRYKHLSHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        16 ~E~~~l~~l~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      .+...+..++|+||++++++.....    ..+++++.+.. ++.+++..                 ....++..+..++.
T Consensus        72 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----------------~~~~~~~~~~~i~~  133 (294)
T PHA02882         72 ALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKR-----------------IKCKNKKLIKNIMK  133 (294)
T ss_pred             HHHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHh-----------------hccCCHHHHHHHHH
Confidence            3444566778999999998765443    24666776643 55444331                 12356778889999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----------CCCccccccccCceecCCCCCCC
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----------SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      |++.||.|||+.+++||||||+|||++.        ||++......           ....+|+.|+|||...+  ..++
T Consensus       134 qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~--~~~~  211 (294)
T PHA02882        134 DMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG--ACVT  211 (294)
T ss_pred             HHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC--CCCC
Confidence            9999999999999999999999999875        8887543211           12357999999999887  6689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHH-HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDI-MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|||||||++|+|++|..||........ ................       ......++.+.++++.|+..+|++||
T Consensus       212 ~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~rp  284 (294)
T PHA02882        212 RRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK-------IKIKNANKFIYDFIECVTKLSYEEKP  284 (294)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhh-------hccCCCCHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999999987633222 1111100000000000       00134578899999999999999999


Q ss_pred             cHHHHhh
Q 037274          232 AAEAQVL  238 (245)
Q Consensus       232 t~~~~l~  238 (245)
                      +.+++++
T Consensus       285 ~~~~l~~  291 (294)
T PHA02882        285 DYDALIK  291 (294)
T ss_pred             CHHHHHH
Confidence            9999875

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.98  E-value=1.9e-32  Score=223.89  Aligned_cols=209  Identities=22%  Similarity=0.322  Sum_probs=155.8

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ....+..-+|+++|++|+|+|||++++.-++..      ...++||||.+|||...++.              ......+
T Consensus        52 ~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~--------------PEN~~GL  117 (732)
T KOG4250|consen   52 LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNS--------------PENAYGL  117 (732)
T ss_pred             cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcC--------------cccccCC
Confidence            446778889999999999999999998765443      47999999999999777753              2235679


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc------------ccCccccccCC---CCccccccccCceecC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWISS---SSSITTWAAAPEVVNF  146 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~~~---~~~~~~~y~aPE~~~~  146 (245)
                      ++.+++.++.+++.||.|||++||+||||||.||++-.            ||.++.....+   ...||+.|++||+...
T Consensus       118 pE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~  197 (732)
T KOG4250|consen  118 PESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYER  197 (732)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhh
Confidence            99999999999999999999999999999999999754            89888777666   4567999999999973


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCch----HHHHHHHhcCCCCccC----CCCCCC-C------CCCCcccc
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL----DIMTKMLMKQPKSTSL----QVAPNE-D------TTHGTRTL  211 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~-~------~~~~~~~~  211 (245)
                       +..++..+|.|||||++|+++||..||......    +.+..+....+.....    ....+. +      +...+..+
T Consensus       198 -q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l  276 (732)
T KOG4250|consen  198 -QKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGL  276 (732)
T ss_pred             -ccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHH
Confidence             367999999999999999999999999653332    2222222222111110    000000 0      11111223


Q ss_pred             cHHHHHHHHHhcCCCCCCCc
Q 037274          212 SKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       212 ~~~~~~li~~~l~~~p~~Rp  231 (245)
                      ...+..++..+|..+|.+|-
T Consensus       277 ~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  277 ATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             HhhhhHHHHHHHhhhHHHhC
Confidence            34566788889999999887

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.98  E-value=6.6e-33  Score=203.03  Aligned_cols=217  Identities=20%  Similarity=0.278  Sum_probs=166.4

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .++..+++..|.....+- +.||||++||++..++..|+.||.++- ||+.+.+.            ....++..++++.
T Consensus       102 ~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-SlDklYk~------------vy~vq~~~ipE~I  168 (361)
T KOG1006|consen  102 IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-SLDKLYKR------------VYSVQKSRIPENI  168 (361)
T ss_pred             chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-hHHHHHHH------------HHHHHhccCcHhh
Confidence            356778889999865555 689999999999999999999999975 88665542            2223457799999


Q ss_pred             HHHHHHHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCc
Q 037274           86 LAIAHKETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +-.|..-.+.||.||-.. .|+|||+||+|||++.        ||.+.....+   ....|...|||||.+......++-
T Consensus       169 lg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDi  248 (361)
T KOG1006|consen  169 LGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDI  248 (361)
T ss_pred             hhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcch
Confidence            999999999999999864 7999999999999998        5543322211   134567899999999875567999


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++||||||++|||++||..|+...++  ...++.+...+     .++..........++..+..+|..||..|-..||+.
T Consensus       249 RSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~g-----dpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky  321 (361)
T KOG1006|consen  249 RSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIG-----DPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKY  321 (361)
T ss_pred             hhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcC-----CCCeecCcccccccCHHHHHHHHHHhhcccccCcch
Confidence            99999999999999999999988544  23333222211     111111222235688999999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      .+++++||++
T Consensus       322 ~~Lk~~~fyr  331 (361)
T KOG1006|consen  322 DDLKKFPFYR  331 (361)
T ss_pred             hhhhcCchhh
Confidence            9999999975

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=5.2e-31  Score=226.20  Aligned_cols=150  Identities=21%  Similarity=0.288  Sum_probs=108.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc----------------------cCCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW----------------------ISSS  131 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~----------------------~~~~  131 (245)
                      .....|.++++|++||+|+|+.||+||||||.||+++.        ||+++...                      ....
T Consensus       695 ~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts  774 (1351)
T KOG1035|consen  695 QRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTS  774 (1351)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccccc
Confidence            46788999999999999999999999999999999986        88766411                      1113


Q ss_pred             CccccccccCceecCC-CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCccc
Q 037274          132 SSITTWAAAPEVVNFG-DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRT  210 (245)
Q Consensus       132 ~~~~~~y~aPE~~~~~-~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (245)
                      ..||.-|+|||++.+. ...|+.|+|+||||++++||+..   |...   .....+....+..   ..+.+  ... ...
T Consensus       775 ~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~Ts---MERa~iL~~LR~g---~iP~~--~~f-~~~  842 (1351)
T KOG1035|consen  775 QVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTS---MERASILTNLRKG---SIPEP--ADF-FDP  842 (1351)
T ss_pred             ccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCch---HHHHHHHHhcccC---CCCCC--ccc-ccc
Confidence            4569999999999862 23699999999999999999865   5441   1111222222211   11111  001 122


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      --+.-..+|+.|++.||++|||+.++|++.||.
T Consensus       843 ~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  843 EHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             cchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            334557899999999999999999999999874

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.97  E-value=2.7e-31  Score=190.88  Aligned_cols=215  Identities=15%  Similarity=0.178  Sum_probs=161.0

Q ss_pred             HHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            8 AEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      +-..+++.+|+.+|..|. ||||+++++...+.  ...-+++|++.+.+...+.                    ..++.-
T Consensus        73 PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly--------------------~tl~d~  132 (338)
T KOG0668|consen   73 PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY--------------------PTLTDY  132 (338)
T ss_pred             hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHh--------------------hhhchh
Confidence            345788999999999997 99999999998764  3578999999987764333                    346777


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccCCCCc---cccccccCceecCCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWISSSSS---ITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~~~~---~~~~y~aPE~~~~~~~~~~  152 (245)
                      .+..++.++++||.|+|+.||.|||+||.|++++.         .|++.....+....   .+..|--||++.. -..++
T Consensus       133 dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVd-y~~YD  211 (338)
T KOG0668|consen  133 DIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD-YQMYD  211 (338)
T ss_pred             hHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheee-chhcc
Confidence            88999999999999999999999999999999986         77776555544332   2556778999886 45688


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCC-CCchHHHHHHHhcCCC------------CccCCCCC-------CCC----CCCCc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSR-RQDLDIMTKMLMKQPK------------STSLQVAP-------NED----TTHGT  208 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~-~~~~~~~~~~~~~~~~------------~~~~~~~~-------~~~----~~~~~  208 (245)
                      .+-|+|||||++..|+..+.||.. .++.+.+.++.....+            ....+...       ..+    .....
T Consensus       212 YSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~  291 (338)
T KOG0668|consen  212 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQ  291 (338)
T ss_pred             ccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccc
Confidence            999999999999999999999864 3444444333222211            11110000       000    11111


Q ss_pred             ccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          209 RTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       209 ~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .-.+++..+++.++|..|-.+|+|+.|.+.||||.
T Consensus       292 hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~  326 (338)
T KOG0668|consen  292 HLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFA  326 (338)
T ss_pred             ccCChHHHHHHHHHHhhccccccchHHHhcCchHH
Confidence            33458999999999999999999999999999995

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-30  Score=222.07  Aligned_cols=216  Identities=19%  Similarity=0.296  Sum_probs=166.7

Q ss_pred             cHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ...+.+.+..|+++|+.+. |+||+.+.|++..++..++|+||+..|+|.++++............ ........++...
T Consensus       341 ~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~-~~~~~~~~L~~~d  419 (609)
T KOG0200|consen  341 SSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSG-VFPNERDALTTKD  419 (609)
T ss_pred             CcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccC-CCccccCCcCHHH
Confidence            3467899999999999995 9999999999988899999999999999999998654000000000 0000002488899


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCC-----c--cccccccCceecCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSS-----S--ITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~-----~--~~~~y~aPE~~~~~~~~  150 (245)
                      +..++.||+.|++||++.++|||||-++|||++.        ||+++........     .  ....|||||.+..  ..
T Consensus       420 Llsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~--~~  497 (609)
T KOG0200|consen  420 LLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD--RV  497 (609)
T ss_pred             HHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc--Cc
Confidence            9999999999999999999999999999999987        9998754333321     1  2456999999987  78


Q ss_pred             CCchhhHHHHHHHHHHHhh-CCCCCCCCC-chHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPC-GGLPVSRRQ-DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~-g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ++.++||||||++||||.+ |..||.+-. ..+..+.+....      +...+       ..++.++.+++..||..+|+
T Consensus       498 ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~------r~~~P-------~~c~~eiY~iM~~CW~~~p~  564 (609)
T KOG0200|consen  498 FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGN------RMEQP-------EHCSDEIYDLMKSCWNADPE  564 (609)
T ss_pred             ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCC------CCCCC-------CCCCHHHHHHHHHHhCCCcc
Confidence            9999999999999999988 788998743 333333222222      11222       66799999999999999999


Q ss_pred             CCccHHHHhh
Q 037274          229 KRPAAEAQVL  238 (245)
Q Consensus       229 ~Rpt~~~~l~  238 (245)
                      +||++.++.+
T Consensus       565 ~RP~F~~~~~  574 (609)
T KOG0200|consen  565 DRPTFSECVE  574 (609)
T ss_pred             cCCCHHHHHH
Confidence            9999998764

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=7e-32  Score=209.00  Aligned_cols=204  Identities=15%  Similarity=0.206  Sum_probs=172.4

Q ss_pred             HHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .++.+-...|.++|.... -|.++.++.+|.+-+.+|.||||+.||+|-..|+                 +-..+.+..+
T Consensus       390 dDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQ-----------------Q~GkFKEp~A  452 (683)
T KOG0696|consen  390 DDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-----------------QVGKFKEPVA  452 (683)
T ss_pred             cCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHH-----------------HhcccCCchh
Confidence            344555667888887774 6788999999999999999999999999944443                 2356888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++..|+.||-+||++||+.||||.+||+++.        ||..+......    +.+|||.|+|||.+..  .+|+.+
T Consensus       453 vFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~Y--qPYgks  530 (683)
T KOG0696|consen  453 VFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAY--QPYGKS  530 (683)
T ss_pred             hhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEe--cccccc
Confidence            999999999999999999999999999999987        77766543332    6788999999999997  779999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH-
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA-  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-  233 (245)
                      +|-||+|++||||+.|.+||.+.++.+..+.+.....              ..+..+|.+..+++...|...|.+|... 
T Consensus       531 vDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv--------------syPKslSkEAv~ickg~ltK~P~kRLGcg  596 (683)
T KOG0696|consen  531 VDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV--------------SYPKSLSKEAVAICKGLLTKHPGKRLGCG  596 (683)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC--------------cCcccccHHHHHHHHHHhhcCCccccCCC
Confidence            9999999999999999999999998888888776542              1127789999999999999999999853 


Q ss_pred             ----HHHhhcccccc
Q 037274          234 ----EAQVLQEMWHF  244 (245)
Q Consensus       234 ----~~~l~~~~f~~  244 (245)
                          .++-.||||++
T Consensus       597 ~~ge~di~~H~FFR~  611 (683)
T KOG0696|consen  597 PEGERDIREHPFFRR  611 (683)
T ss_pred             CccccchhhCcchhh
Confidence                56899999985

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=3.7e-31  Score=232.78  Aligned_cols=188  Identities=15%  Similarity=0.197  Sum_probs=136.9

Q ss_pred             hhCCC-CCeeeEEEEE-------EeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHH
Q 037274           22 KHLSH-PNIIPIYKTM-------ISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKET   93 (245)
Q Consensus        22 ~~l~h-~~Iv~~~~~~-------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi   93 (245)
                      +.++| +||++++++|       ...+.++.++|+++ ++|.+++..                ....+++..+..++.||
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~----------------~~~~~~~~~~~~i~~qi   89 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDN----------------PDRSVDAFECFHVFRQI   89 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhc----------------ccccccHHHHHHHHHHH
Confidence            45567 6888898887       22345777788774 599777642                13458899999999999


Q ss_pred             HHHHHHHHhCCcccccCCCCceeccc---------------------------ccCcccccc------------------
Q 037274           94 LKGLSYLQGEGLFHKNISAGHILHNI---------------------------FNDDTRNWI------------------  128 (245)
Q Consensus        94 ~~~l~~lh~~~ivH~dlkp~nil~~~---------------------------f~~~~~~~~------------------  128 (245)
                      +.||.|||++||+||||||+|||++.                           ||++.....                  
T Consensus        90 ~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~  169 (793)
T PLN00181         90 VEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFP  169 (793)
T ss_pred             HHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCc
Confidence            99999999999999999999999942                           554432110                  


Q ss_pred             --CCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCC
Q 037274          129 --SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTH  206 (245)
Q Consensus       129 --~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (245)
                        .....+|+.|+|||++.+  ..++.++|||||||++|||++|.+|+....  .....+....       .++..    
T Consensus       170 ~~~~~~~gt~~Y~APE~~~~--~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~-------~~~~~----  234 (793)
T PLN00181        170 MKQILAMEMSWYTSPEEDNG--SSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV-------LPPQI----  234 (793)
T ss_pred             ccccccCCCcceEChhhhcc--CCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-------cChhh----
Confidence              001245888999999987  568999999999999999999988865421  1111111111       00000    


Q ss_pred             CcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          207 GTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       207 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                        ....+...+++..||+++|.+||++.++++||||.
T Consensus       235 --~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~  269 (793)
T PLN00181        235 --LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFIN  269 (793)
T ss_pred             --hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhh
Confidence              11234567899999999999999999999999984

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=6.5e-30  Score=207.18  Aligned_cols=205  Identities=17%  Similarity=0.162  Sum_probs=163.6

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .+...++.|-.||..-.++-||++|..|.+++.+|.||+|++||++-.++..                 ..-|++.....
T Consensus       671 nQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIr-----------------mgIFeE~LARF  733 (1034)
T KOG0608|consen  671 NQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-----------------MGIFEEDLARF  733 (1034)
T ss_pred             hhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHH-----------------hccCHHHHHHH
Confidence            4567788899999999999999999999999999999999999999776653                 34588899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccc---------ccC----------------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRN---------WIS----------------------  129 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~---------~~~----------------------  129 (245)
                      ++..+..|+.+.|..|++||||||+||||+.        ||+..-.         ..+                      
T Consensus       734 YIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lk  813 (1034)
T KOG0608|consen  734 YIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLK  813 (1034)
T ss_pred             HHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccch
Confidence            9999999999999999999999999999987        5552210         000                      


Q ss_pred             ---------------CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCc
Q 037274          130 ---------------SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST  194 (245)
Q Consensus       130 ---------------~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  194 (245)
                                     ....||+.|+|||++..  ..++..+|-||.|++||||+.|++||...+..+...++..+..   
T Consensus       814 vL~~ra~~~h~r~~ahslvgt~nyiapevl~r--~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~---  888 (1034)
T KOG0608|consen  814 VLERRAMRQHQRILAHSLVGTPNYIAPEVLAR--TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRN---  888 (1034)
T ss_pred             HHHHHHHhhhhhhhhhhhcCCCcccChHHhcc--cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhh---
Confidence                           02355999999999986  7799999999999999999999999998777665443332221   


Q ss_pred             cCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---cHHHHhhccccc
Q 037274          195 SLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---AAEAQVLQEMWH  243 (245)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---t~~~~l~~~~f~  243 (245)
                      ...+       .....++++..++|.+++. +++.|.   .++++-.||||+
T Consensus       889 ~l~~-------~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFk  932 (1034)
T KOG0608|consen  889 FLHI-------PYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFK  932 (1034)
T ss_pred             cccc-------ccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcccc
Confidence            0111       1126789999999988654 467877   467899999996

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=2.6e-30  Score=217.98  Aligned_cols=203  Identities=13%  Similarity=0.125  Sum_probs=129.0

Q ss_pred             EeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhh-----hccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCC
Q 037274           37 ISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMS-----NRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNIS  111 (245)
Q Consensus        37 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlk  111 (245)
                      ..++..++|+||+.+++|.+++.........  .....     ...........+..++.|++.||.|||+.+|+|||||
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v--~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK  282 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNV--EPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK  282 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhH--HHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence            3456799999999999999988743221110  11110     0011123345677899999999999999999999999


Q ss_pred             CCceeccc---------ccCccccccC-----CCCccccccccCceecCCC--------------------CCCCchhhH
Q 037274          112 AGHILHNI---------FNDDTRNWIS-----SSSSITTWAAAPEVVNFGD--------------------DYYSCKSDI  157 (245)
Q Consensus       112 p~nil~~~---------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~--------------------~~~~~~~Dv  157 (245)
                      |+|||++.         ||++......     ....+++.|+|||.+..+.                    ..++.++||
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV  362 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI  362 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence            99999974         8877643221     2345689999999664311                    123456799


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCc-cC-----CCCCCC--CCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST-SL-----QVAPNE--DTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      |||||++|||+++..++..  ................ .+     ......  ..............+||.+||+.||.+
T Consensus       363 wSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k  440 (566)
T PLN03225        363 YSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ  440 (566)
T ss_pred             HHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence            9999999999987766432  2222221111110000 00     000000  000000112345669999999999999


Q ss_pred             CccHHHHhhccccc
Q 037274          230 RPAAEAQVLQEMWH  243 (245)
Q Consensus       230 Rpt~~~~l~~~~f~  243 (245)
                      |||+.++++||||.
T Consensus       441 R~ta~e~L~Hpff~  454 (566)
T PLN03225        441 RISAKAALAHPYFD  454 (566)
T ss_pred             CCCHHHHhCCcCcC
Confidence            99999999999995

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=1.2e-29  Score=184.93  Aligned_cols=150  Identities=21%  Similarity=0.289  Sum_probs=111.7

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc------ccCccccccCCCCccccccccCceecCCCCCC
Q 037274           78 RYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..+++..++.++.|++.||.|||+.+      ||+||+++.      ||.+...... ...+++.|+|||.+.+  ..+
T Consensus        11 ~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~fG~~~~~~~~-~~~g~~~y~aPE~~~~--~~~   81 (176)
T smart00750       11 GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKLDGSVAFKTPE-QSRVDPYFMAPEVIQG--QSY   81 (176)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceeeccceEeeccc-cCCCcccccChHHhcC--CCC
Confidence            346899999999999999999999998      999999876      5655433322 3367899999999987  568


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchH-HHHHHHhcCCCCccCCCCCCCCCCCCcccccH--HHHHHHHHhcCCCCC
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLD-IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSK--NFWNMVKICLAPDPA  228 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~~l~~~p~  228 (245)
                      +.++|||||||++|+|++|..||....... ............ .     +.. .......+.  ++.+++.+||..+|.
T Consensus        82 ~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~-----~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~  154 (176)
T smart00750       82 TEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD-D-----PRD-RSNLESVSAARSFADFMRVCASRLPQ  154 (176)
T ss_pred             cchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC-C-----ccc-cccHHHHHhhhhHHHHHHHHHhcccc
Confidence            999999999999999999999997654332 222222211100 0     000 001123333  699999999999999


Q ss_pred             CCccHHHHhhccccc
Q 037274          229 KRPAAEAQVLQEMWH  243 (245)
Q Consensus       229 ~Rpt~~~~l~~~~f~  243 (245)
                      +||++.++++|+|..
T Consensus       155 ~Rp~~~~ll~~~~~~  169 (176)
T smart00750      155 RREAANHYLAHCRAL  169 (176)
T ss_pred             cccCHHHHHHHHHHH
Confidence            999999999998853

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.96  E-value=1e-28  Score=203.97  Aligned_cols=225  Identities=12%  Similarity=0.097  Sum_probs=147.3

Q ss_pred             HHHHHHHHhhCCCCCe-----eeEEEEEEe--------CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhh-----
Q 037274           14 LAREIYRYKHLSHPNI-----IPIYKTMIS--------QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN-----   75 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~I-----v~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-----   75 (245)
                      ...|+..+.+++|.++     ++++++|..        ++..++|+||+++++|.++++.............+..     
T Consensus       219 ~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~  298 (507)
T PLN03224        219 GMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIP  298 (507)
T ss_pred             hHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchh
Confidence            3346777777776554     666776643        3568999999999999999975433222221222111     


Q ss_pred             --ccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCcccccccc
Q 037274           76 --RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAA  140 (245)
Q Consensus        76 --~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~a  140 (245)
                        .....+++..+..++.|++.||.|+|+.+++||||||+||+++.        ||++.......     ...+++.|+|
T Consensus       299 ~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a  378 (507)
T PLN03224        299 DNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP  378 (507)
T ss_pred             hhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence              11234677889999999999999999999999999999999875        77664332211     1223789999


Q ss_pred             CceecCCCC--------------------CCCchhhHHHHHHHHHHHhhCCC-CCCCCCchHHH-H---HHHhcCCCCcc
Q 037274          141 PEVVNFGDD--------------------YYSCKSDIWLIGITALQFPCGGL-PVSRRQDLDIM-T---KMLMKQPKSTS  195 (245)
Q Consensus       141 PE~~~~~~~--------------------~~~~~~DvwslG~~l~~~~~g~~-p~~~~~~~~~~-~---~~~~~~~~~~~  195 (245)
                      ||.+.....                    ....+.|+||+||++++|++|.. ||......... .   ........   
T Consensus       379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~---  455 (507)
T PLN03224        379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM---  455 (507)
T ss_pred             hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh---
Confidence            999864110                    11234799999999999999875 66542111110 0   00000000   


Q ss_pred             CCCCCCCCCCCCcccccHHHHHHHHHhcCCCC---CCCccHHHHhhccccc
Q 037274          196 LQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP---AKRPAAEAQVLQEMWH  243 (245)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rpt~~~~l~~~~f~  243 (245)
                        ..............++...+++.+||..+|   .+|+|++++|+||||.
T Consensus       456 --~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~  504 (507)
T PLN03224        456 --YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL  504 (507)
T ss_pred             --hcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence              000000011124567899999999999766   6899999999999996

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.9e-29  Score=191.08  Aligned_cols=209  Identities=16%  Similarity=0.252  Sum_probs=163.8

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..++.+=++.|..+..+- +||.+|-++.+|.++..++.|.||++||+|               -..+..  ...+++..
T Consensus       290 ddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdl---------------mfhmqr--qrklpeeh  352 (593)
T KOG0695|consen  290 DDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDL---------------MFHMQR--QRKLPEEH  352 (593)
T ss_pred             CcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcce---------------eeehhh--hhcCcHHH
Confidence            445666677888888776 699999999999999999999999999999               222222  45689999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccc----ccCCCCccccccccCceecCCCCCCCc
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRN----WISSSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ...+...|+.||.|||+.||+.||||.+|+|++.        +|..+..    ...++.+|||.|.|||.+.+  ..|++
T Consensus       353 arfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrg--eeygf  430 (593)
T KOG0695|consen  353 ARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRG--EEYGF  430 (593)
T ss_pred             hhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcc--cccCc
Confidence            9999999999999999999999999999999987        4443322    23347888999999999998  77999


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCC----CCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          154 KSDIWLIGITALQFPCGGLPVSR----RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      .+|-|+||++++||+.|+.||.-    +.+......+++.+ .+...+++         ..+|-....+++..|..||.+
T Consensus       431 svdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi-lekqirip---------rslsvkas~vlkgflnkdp~e  500 (593)
T KOG0695|consen  431 SVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI-LEKQIRIP---------RSLSVKASHVLKGFLNKDPKE  500 (593)
T ss_pred             eehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH-hhhccccc---------ceeehhhHHHHHHhhcCCcHH
Confidence            99999999999999999999962    11112222222221 11111221         567778889999999999999


Q ss_pred             Cc------cHHHHhhcccccc
Q 037274          230 RP------AAEAQVLQEMWHF  244 (245)
Q Consensus       230 Rp------t~~~~l~~~~f~~  244 (245)
                      |.      .+.++-.|+||++
T Consensus       501 rlgc~~~~g~~dik~h~ffr~  521 (593)
T KOG0695|consen  501 RLGCRPQTGFSDIKSHAFFRS  521 (593)
T ss_pred             hcCCCcccchhhhhcchhhhh
Confidence            87      4788999999974

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=2.6e-28  Score=187.88  Aligned_cols=208  Identities=18%  Similarity=0.246  Sum_probs=162.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC-ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ-RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ++-+...+..|.-.+..+.|||++.+.+.+..+ ...++++.+...|+|..++..+..-.+         .....++-.+
T Consensus       327 S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~---------~~aqtvtt~q  397 (563)
T KOG1024|consen  327 SQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDP---------SYAQTVTTIQ  397 (563)
T ss_pred             cHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCC---------ccccchhHHH
Confidence            344566677777777788899999999987554 457888889989999998874332211         1234466778


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccc------ccCCCCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRN------WISSSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..++.|++.|++|||+.|++|.||-++|+++++        -.+++-.      ..++.......||+||.+..  ..|
T Consensus       398 lV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n--~~y  475 (563)
T KOG1024|consen  398 LVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN--SHY  475 (563)
T ss_pred             HHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhh--hhh
Confidence            8889999999999999999999999999999988        1111111      11222333778999999997  779


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +..+|+||||+++||++| |+.|+..-++.++...+....      +..++       ..+++++..++-.||...|++|
T Consensus       476 ssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy------RlaQP-------~NCPDeLf~vMacCWallpeeR  542 (563)
T KOG1024|consen  476 SSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY------RLAQP-------FNCPDELFTVMACCWALLPEER  542 (563)
T ss_pred             cchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc------eecCC-------CCCcHHHHHHHHHHHhcCcccC
Confidence            999999999999999998 899999888888777666554      33333       6789999999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      |+++++..
T Consensus       543 Psf~Qlv~  550 (563)
T KOG1024|consen  543 PSFSQLVI  550 (563)
T ss_pred             CCHHHHHH
Confidence            99999864

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.96  E-value=3e-30  Score=204.68  Aligned_cols=220  Identities=14%  Similarity=0.218  Sum_probs=167.7

Q ss_pred             ccHHHHHHHHHHHHHHhhCC------CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCC
Q 037274            6 HQAEEYAKLAREIYRYKHLS------HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY   79 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~------h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   79 (245)
                      ..+--.+.=+.|+++|++|+      --|+++++-.|...+++|||+|.+.- +|.++++.              .....
T Consensus       467 nNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Lsl-NLRevLKK--------------yG~nv  531 (752)
T KOG0670|consen  467 NNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSL-NLREVLKK--------------YGRNV  531 (752)
T ss_pred             cchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhc-hHHHHHHH--------------hCccc
Confidence            34445566789999999995      23899999999999999999998864 78776652              22345


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccCCC--CccccccccCceecCCC
Q 037274           80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWISSS--SSITTWAAAPEVVNFGD  148 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~~--~~~~~~y~aPE~~~~~~  148 (245)
                      .+....+..++.|+..||..|-..|++|.||||+|||++.         ||.+........  +..+-.|.|||.+.|  
T Consensus       532 GL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG--  609 (752)
T KOG0670|consen  532 GLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILG--  609 (752)
T ss_pred             ceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeec--
Confidence            6888899999999999999999999999999999999987         777765554442  223668999999998  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC----------------------CCCCCCC---
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL----------------------QVAPNED---  203 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~---  203 (245)
                      ..|+...|+||+||.|||+.||+..|.+.++..++...+..- +....                      .......   
T Consensus       610 ~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K-Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~  688 (752)
T KOG0670|consen  610 LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK-GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREK  688 (752)
T ss_pred             CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc-CCCcHHHhhhcchhhhhcccccceEEEecccccccee
Confidence            889999999999999999999999999988877765442211 10000                      0000000   


Q ss_pred             -----CCCC-----------------cccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          204 -----TTHG-----------------TRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       204 -----~~~~-----------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                           ...+                 ......++.+|+.+||..||++|.|..+.|+||||.
T Consensus       689 ~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~  750 (752)
T KOG0670|consen  689 RTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFIT  750 (752)
T ss_pred             EEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCccc
Confidence                 0000                 012234689999999999999999999999999985

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.2e-29  Score=195.30  Aligned_cols=212  Identities=20%  Similarity=0.188  Sum_probs=156.0

Q ss_pred             ccHHHHHHHHHHHHHHhh--CCCCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCC
Q 037274            6 HQAEEYAKLAREIYRYKH--LSHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY   79 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~--l~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   79 (245)
                      ....+.+.+.+|.++++.  |+|+||+.++++-..++    ++|+|++|.+.|||.|++.                  ..
T Consensus       242 F~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~------------------r~  303 (513)
T KOG2052|consen  242 FSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLN------------------RN  303 (513)
T ss_pred             ecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHh------------------hc
Confidence            455667788888888874  58999999998754432    5999999999999988886                  36


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHhC--------CcccccCCCCceeccc--------ccCccccccC--------CCCccc
Q 037274           80 GITVDCLAIAHKETLKGLSYLQGE--------GLFHKNISAGHILHNI--------FNDDTRNWIS--------SSSSIT  135 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh~~--------~ivH~dlkp~nil~~~--------f~~~~~~~~~--------~~~~~~  135 (245)
                      .++......++..++.||+|||..        .|.|||||+.|||+..        +|++......        +..+||
T Consensus       304 tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGT  383 (513)
T KOG2052|consen  304 TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGT  383 (513)
T ss_pred             cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccce
Confidence            688899999999999999999976        5999999999999987        7766544333        356789


Q ss_pred             cccccCceecCCC--CCC-C-chhhHHHHHHHHHHHhhC----------CCCCCCCCchHHHHHHHhcCCCCccCCCCCC
Q 037274          136 TWAAAPEVVNFGD--DYY-S-CKSDIWLIGITALQFPCG----------GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPN  201 (245)
Q Consensus       136 ~~y~aPE~~~~~~--~~~-~-~~~DvwslG~~l~~~~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (245)
                      ..|||||++...-  ..+ + ..+||||||.++||++.+          .+||.+-.+.+...+-++........+...+
T Consensus       384 KRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ip  463 (513)
T KOG2052|consen  384 KRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIP  463 (513)
T ss_pred             eeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCC
Confidence            9999999998511  111 1 469999999999999863          4688776555544444444433332221111


Q ss_pred             CCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          202 EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       202 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                       ..+ .+...-..+..+++.||..+|.-|.|+-.+-
T Consensus       464 -nrW-~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  464 -NRW-KSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             -ccc-ccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence             111 1133445678899999999999999886553

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=6.1e-29  Score=195.02  Aligned_cols=204  Identities=16%  Similarity=0.169  Sum_probs=151.5

Q ss_pred             cccHHHHHHHHHHHHHHhhC--CCCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccC
Q 037274            5 NHQAEEYAKLAREIYRYKHL--SHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR   78 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l--~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~   78 (245)
                      ....++.+.+++|-++++..  +|+||++++++-....    .+++|++|.+.|+|.++++                  .
T Consensus       240 ifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~------------------~  301 (534)
T KOG3653|consen  240 IFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLK------------------A  301 (534)
T ss_pred             ecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHH------------------h
Confidence            34677889999999998865  7999999998865444    7999999999999988886                  4


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHhC---------CcccccCCCCceeccc--------ccCccccccCC------CCccc
Q 037274           79 YGITVDCLAIAHKETLKGLSYLQGE---------GLFHKNISAGHILHNI--------FNDDTRNWISS------SSSIT  135 (245)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lh~~---------~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~  135 (245)
                      ..++|.....++..++.||+|||+.         .|+|||||+.|||+..        ||++.......      ...||
T Consensus       302 ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT  381 (534)
T KOG3653|consen  302 NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGT  381 (534)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhh
Confidence            6789999999999999999999986         6999999999999876        88876655332      45679


Q ss_pred             cccccCceecCCCCCCC-----chhhHHHHHHHHHHHhhCCCCCCC----------------CCchHHHHHHHhcCCCCc
Q 037274          136 TWAAAPEVVNFGDDYYS-----CKSDIWLIGITALQFPCGGLPVSR----------------RQDLDIMTKMLMKQPKST  194 (245)
Q Consensus       136 ~~y~aPE~~~~~~~~~~-----~~~DvwslG~~l~~~~~g~~p~~~----------------~~~~~~~~~~~~~~~~~~  194 (245)
                      .+|||||++.+ ...+.     .+.||||+|.++|||+++...+..                ....+.++..+-..+.  
T Consensus       382 ~RYMAPEvLEg-ainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~--  458 (534)
T KOG3653|consen  382 RRYMAPEVLEG-AINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQ--  458 (534)
T ss_pred             hhhcCHHHHhh-hcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhcc--
Confidence            99999999986 22222     469999999999999987644421                0111222222211111  


Q ss_pred             cCCCCCCCCCCCCc-ccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          195 SLQVAPNEDTTHGT-RTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       195 ~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                           .+..+..+. -....-+++.++.||..||+.|.|+.
T Consensus       459 -----RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  459 -----RPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             -----CCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence                 111111111 12345689999999999999999975

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.9e-29  Score=209.45  Aligned_cols=201  Identities=19%  Similarity=0.265  Sum_probs=165.2

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ...+..+++..|+.+|.+|.|||+++++|.+..+. ..||++|++.|+|.++++.                .+..+-.+.
T Consensus       737 t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~----------------hr~~igsq~  799 (1177)
T KOG1025|consen  737 TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVRE----------------HRDNIGSQD  799 (1177)
T ss_pred             CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHH----------------hhccccHHH
Confidence            44567788999999999999999999999987665 8899999999999887763                245677889


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCC------CccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSS------SSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~  151 (245)
                      .+.|+.||++|+.|||++++|||||-++|+|+..        ||+++.......      ....+-|||-|.+..  ..+
T Consensus       800 lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~--~~~  877 (1177)
T KOG1025|consen  800 LLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRI--RKY  877 (1177)
T ss_pred             HHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhc--cCC
Confidence            9999999999999999999999999999999876        887776554432      122667888888886  779


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|||||||.+||++| |..|+.+....+..+.+....      +..++       ..++.++..++.+||..|+..|
T Consensus       878 thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge------RLsqP-------piCtiDVy~~mvkCwmid~~~r  944 (1177)
T KOG1025|consen  878 THQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE------RLSQP-------PICTIDVYMVMVKCWMIDADSR  944 (1177)
T ss_pred             CchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc------cCCCC-------CCccHHHHHHHHHHhccCcccC
Confidence            999999999999999998 889999876666554443332      12222       5688899999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      |++.++..
T Consensus       945 p~fkel~~  952 (1177)
T KOG1025|consen  945 PTFKELAE  952 (1177)
T ss_pred             ccHHHHHH
Confidence            99988653

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.95  E-value=4.5e-28  Score=187.71  Aligned_cols=213  Identities=19%  Similarity=0.253  Sum_probs=157.8

Q ss_pred             HHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ....+..|++.|..+. +.||+++.+++...+...+|+||.+..+..++..                    .++..++..
T Consensus        77 ~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~--------------------~l~~~~i~~  136 (418)
T KOG1167|consen   77 SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYR--------------------SLSLAEIRW  136 (418)
T ss_pred             CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHh--------------------cCCHHHHHH
Confidence            3456899999999994 9999999999999999999999999888755543                    366889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCcccc-----------------cc--------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRN-----------------WI--------------  128 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~-----------------~~--------------  128 (245)
                      +++.++.||+++|.+|||||||||+|+|.+.         ||++...                 ..              
T Consensus       137 Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~  216 (418)
T KOG1167|consen  137 YLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATA  216 (418)
T ss_pred             HHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccc
Confidence            9999999999999999999999999999886         6654300                 00              


Q ss_pred             -----------------CCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCch-HHHHHHH---
Q 037274          129 -----------------SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL-DIMTKML---  187 (245)
Q Consensus       129 -----------------~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~-~~~~~~~---  187 (245)
                                       .....||++|.|||++.. ....++++||||.|++++.++++..||....+. +....+.   
T Consensus       217 ~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k-~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tif  295 (418)
T KOG1167|consen  217 SKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR-CPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIF  295 (418)
T ss_pred             cCCCCceeccCCCccceecccCCCCCCCchHHHhh-ccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHh
Confidence                             002345999999999985 455789999999999999999999999753332 2111110   


Q ss_pred             --------hcCCCC-ccCC---------------C---------CCC-CCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          188 --------MKQPKS-TSLQ---------------V---------APN-EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       188 --------~~~~~~-~~~~---------------~---------~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                              ....+. ..++               .         ..+ ..........+..+.+++++|+..||.+|.|+
T Consensus       296 G~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitA  375 (418)
T KOG1167|consen  296 GSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITA  375 (418)
T ss_pred             ChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccH
Confidence                    000000 0000               0         000 11122224455678999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      ++.|+||||.
T Consensus       376 EeALkHpFF~  385 (418)
T KOG1167|consen  376 EDALKHPFFD  385 (418)
T ss_pred             HHHhcCcCCc
Confidence            9999999995

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=9.6e-29  Score=201.06  Aligned_cols=214  Identities=26%  Similarity=0.388  Sum_probs=168.0

Q ss_pred             ccccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            2 IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         2 ~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      +|++ ..++.+-+++|+-+++..+|+||+.++|.+...+.+|+.||||.+|+|.+...               .  ...+
T Consensus        48 VkLe-p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~---------------~--Tgpl  109 (829)
T KOG0576|consen   48 VKLE-PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYH---------------V--TGPL  109 (829)
T ss_pred             eecc-CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceee---------------e--cccc
Confidence            3444 34567788999999999999999999999999999999999999999954332               2  4678


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecC-CC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNF-GD  148 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~  148 (245)
                      ++.++...++..+.|++|||+.|-+|||||-.||++++        ||.+.....    ...+.|||.|||||+..- .+
T Consensus       110 selqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverk  189 (829)
T KOG0576|consen  110 SELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERK  189 (829)
T ss_pred             hhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhc
Confidence            99999999999999999999999999999999999998        554433222    225678999999998764 34


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ..|...+|+|++|+...|+..-.+|.+..-   .++..+....-..    .++.  ......+++.+-+|++.++..+|.
T Consensus       190 ggynqlcdiwa~gitAiel~eLqpplfdlh---pmr~l~LmTkS~~----qpp~--lkDk~kws~~fh~fvK~altknpK  260 (829)
T KOG0576|consen  190 GGYNQLCDIWALGITAIELGELQPPLFDLH---PMRALFLMTKSGF----QPPT--LKDKTKWSEFFHNFVKGALTKNPK  260 (829)
T ss_pred             ccccccccccccccchhhhhhcCCcccccc---hHHHHHHhhccCC----CCCc--ccCCccchHHHHHHHHHHhcCCCc
Confidence            568999999999999999988888876633   3333322221111    1111  122267889999999999999999


Q ss_pred             CCccHHHHhhcccc
Q 037274          229 KRPAAEAQVLQEMW  242 (245)
Q Consensus       229 ~Rpt~~~~l~~~~f  242 (245)
                      +||+++.+|+|||-
T Consensus       261 kRptaeklL~h~fv  274 (829)
T KOG0576|consen  261 KRPTAEKLLQHPFV  274 (829)
T ss_pred             cCCChhhheeceee
Confidence            99999999999874

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2e-28  Score=180.70  Aligned_cols=213  Identities=17%  Similarity=0.257  Sum_probs=158.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc-----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQR-----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+.+.+|+..|.-.+|.|++...+...-.+     ++|+++|.+.. +|...|-+                 ...++.+
T Consensus        95 s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQS-DLHKIIVS-----------------PQ~Ls~D  156 (449)
T KOG0664|consen   95 SCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQS-DLHKIIVS-----------------PQALTPD  156 (449)
T ss_pred             HHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHh-hhhheecc-----------------CCCCCcc
Confidence            5678899999999999999999988765433     36777777764 66444321                 4568888


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCC-----ccccccccCceecCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSS-----SITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~-----~~~~~y~aPE~~~~~~~~~  151 (245)
                      .++.++.||+.||.|||+.+|.||||||.|.|++.        ||+++........     ..|..|.|||.+.+ ...|
T Consensus       157 HvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMG-aRhY  235 (449)
T KOG0664|consen  157 HVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMG-ARRY  235 (449)
T ss_pred             hhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhc-chhh
Confidence            99999999999999999999999999999999986        9988766554432     22889999999986 6679


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC--------------CC--CCCC----CCCCCcccc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL--------------QV--APNE----DTTHGTRTL  211 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~----~~~~~~~~~  211 (245)
                      +...||||+||++.|++.++..|...+..+.++-+.....+....              +.  ..+.    ........-
T Consensus       236 s~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~  315 (449)
T KOG0664|consen  236 TGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDK  315 (449)
T ss_pred             cCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCccc
Confidence            999999999999999999999998766655554443322211100              00  0000    111111233


Q ss_pred             cHHHHHHHHHhcCCCCCCCccHHHHhhccc
Q 037274          212 SKNFWNMVKICLAPDPAKRPAAEAQVLQEM  241 (245)
Q Consensus       212 ~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~  241 (245)
                      .-+...+...++.+||.+|.+.++.+.|++
T Consensus       316 ~heav~~~~~~l~~d~dkris~~~A~~~~~  345 (449)
T KOG0664|consen  316 NHEAVDLLQKLLHFDPDKRISVEEALQHRY  345 (449)
T ss_pred             chHHHHHHHHHhCCCCcccccHhhhccccc
Confidence            346778999999999999999999999976

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.6e-26  Score=182.21  Aligned_cols=100  Identities=16%  Similarity=0.334  Sum_probs=79.4

Q ss_pred             cccccHHHH-HHHHHHHHHHhhCC--------CCCeeeEEEEEEeC----ceeEEEeeecccCCHHHHHhcCCCCChhhH
Q 037274            3 DINHQAEEY-AKLAREIYRYKHLS--------HPNIIPIYKTMISQ----RQLFYAEIACMIGSLDSIMTYRPLNSPAAT   69 (245)
Q Consensus         3 ~~~~~~~~~-~~~~~E~~~l~~l~--------h~~Iv~~~~~~~~~----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~   69 (245)
                      |+.++.+.+ +....||.+|+++.        -.+||++++.|...    .+.|+|+|+... +|-.+|++         
T Consensus       109 KVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGd-nLLklI~~---------  178 (590)
T KOG1290|consen  109 KVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGD-NLLKLIKY---------  178 (590)
T ss_pred             EEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhh-HHHHHHHH---------
Confidence            455555544 45788999999883        34899999999653    469999999965 66555542         


Q ss_pred             HHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHh-CCcccccCCCCceecc
Q 037274           70 QLIMSNRHRYGITVDCLAIAHKETLKGLSYLQG-EGLFHKNISAGHILHN  118 (245)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~  118 (245)
                            ..-..++...++.|+.||+.||.|||. .||+|.||||+|||+.
T Consensus       179 ------s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  179 ------SNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             ------hCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence                  234569999999999999999999997 5999999999999964

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.94  E-value=9.2e-27  Score=165.07  Aligned_cols=167  Identities=19%  Similarity=0.271  Sum_probs=132.1

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+..++...|+++..+- ..|.+|.+||....++..|+.||.+.. ||+.+...          .   ...+..+++..
T Consensus        84 n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~----------v---~~~g~~ipE~v  149 (282)
T KOG0984|consen   84 NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRK----------V---LKKGGTIPEDV  149 (282)
T ss_pred             ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHH----------H---HhcCCcCchHH
Confidence            456677888899866554 699999999999999999999999976 88665541          1   12357799999


Q ss_pred             HHHHHHHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCC--CCCC
Q 037274           86 LAIAHKETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFG--DDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~--~~~~  151 (245)
                      +-.|+..++.||.|||++ .++|||+||+|||++.        ||.+.....+-   ...|...|||||.+..+  ...|
T Consensus       150 lGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY  229 (282)
T KOG0984|consen  150 LGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGY  229 (282)
T ss_pred             hhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccc
Confidence            999999999999999986 7999999999999997        66554333222   24567899999999863  3468


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCC-CchHHHHHHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRR-QDLDIMTKML  187 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~-~~~~~~~~~~  187 (245)
                      +-++||||||+.+.||.+++.||... ++.+.+++.+
T Consensus       230 ~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvV  266 (282)
T KOG0984|consen  230 SVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVV  266 (282)
T ss_pred             eeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHh
Confidence            99999999999999999999999764 3344444443

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.94  E-value=1.2e-25  Score=167.78  Aligned_cols=169  Identities=28%  Similarity=0.438  Sum_probs=142.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++.++.++|++|+++++++......++++|++++++|.+++...                ...++...+..+
T Consensus        34 ~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~----------------~~~~~~~~~~~~   97 (215)
T cd00180          34 LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKEN----------------EGKLSEDEILRI   97 (215)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhc----------------cCCCCHHHHHHH
Confidence            3578999999999999999999999999888999999999999998777521                135788899999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.+++.++.+||+.|++|+||+|.||+++.         |+.+......    ....+...|++||..... ...+.+.|
T Consensus        98 ~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~D  176 (215)
T cd00180          98 LLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGK-GYYSEKSD  176 (215)
T ss_pred             HHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhccc-CCCCchhh
Confidence            999999999999999999999999999986         3322222211    123357889999998762 26789999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      +|++|++++++                                             ..+.+++..|++.+|.+||++.++
T Consensus       177 ~~~lg~~~~~l---------------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l  211 (215)
T cd00180         177 IWSLGVILYEL---------------------------------------------PELKDLIRKMLQKDPEKRPSAKEI  211 (215)
T ss_pred             hHHHHHHHHHH---------------------------------------------HHHHHHHHHHhhCCcccCcCHHHH
Confidence            99999999998                                             577899999999999999999999


Q ss_pred             hhcc
Q 037274          237 VLQE  240 (245)
Q Consensus       237 l~~~  240 (245)
                      ++++
T Consensus       212 ~~~~  215 (215)
T cd00180         212 LEHL  215 (215)
T ss_pred             hhCC
Confidence            9874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.94  E-value=2e-27  Score=190.74  Aligned_cols=145  Identities=19%  Similarity=0.251  Sum_probs=124.1

Q ss_pred             HHHHHHHHhhCC---CCCeeeEEEEEEeCceeEEEeeecc-cCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           14 LAREIYRYKHLS---HPNIIPIYKTMISQRQLFYAEIACM-IGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        14 ~~~E~~~l~~l~---h~~Iv~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      +-.|+++|..|+   |+||++++++|++++.+|+++|... +.+|-++|+.                 +..+++.+...|
T Consensus       613 Vp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~-----------------kp~m~E~eAk~I  675 (772)
T KOG1152|consen  613 VPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEF-----------------KPRMDEPEAKLI  675 (772)
T ss_pred             cchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhc-----------------cCccchHHHHHH
Confidence            456999999997   9999999999999999999999765 5578777763                 567899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc--CCCCccccccccCceecCCCCCCCchhhHHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI--SSSSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      +.||+.|+++||+.||||||||-+|++++.        ||.+.....  .....||..|+|||++.+ ....+...|||+
T Consensus       676 FkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g-~~y~gk~qdiwa  754 (772)
T KOG1152|consen  676 FKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGG-EKYLGKPQDIWA  754 (772)
T ss_pred             HHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCC-CccCCCcchhhh
Confidence            999999999999999999999999999987        555543332  235677999999999986 455678899999


Q ss_pred             HHHHHHHHhhCCCCCCC
Q 037274          160 IGITALQFPCGGLPVSR  176 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~  176 (245)
                      +|++||.+++...||..
T Consensus       755 lgillytivykenpyyn  771 (772)
T KOG1152|consen  755 LGILLYTIVYKENPYYN  771 (772)
T ss_pred             hhheeeEEEeccCCCcC
Confidence            99999999999999864

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.93  E-value=4.5e-27  Score=173.10  Aligned_cols=198  Identities=19%  Similarity=0.221  Sum_probs=146.7

Q ss_pred             HHHHHHHHHHHHHHhhCC-CCCeeeEEEE-EEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            8 AEEYAKLAREIYRYKHLS-HPNIIPIYKT-MISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ....++|.+|...=-.|. |.||+.-|+. |++.+.++.++||++.|+|.+-+.                  ...+-+..
T Consensus        61 ~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~------------------~~GigE~~  122 (378)
T KOG1345|consen   61 QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVE------------------AAGIGEAN  122 (378)
T ss_pred             hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcC------------------cccccHHH
Confidence            345678888887655554 8999987765 788899999999999999954332                  35677888


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccCCCC-ccccccccCceecC---CCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWISSSS-SITTWAAAPEVVNF---GDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~~~~-~~~~~y~aPE~~~~---~~~~~  151 (245)
                      ...++.|++.|+.|+|++++||||||.+|||+..          ||.....+..-.. ..+..|.+||.+..   ++...
T Consensus       123 ~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~  202 (378)
T KOG1345|consen  123 TKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVV  202 (378)
T ss_pred             HHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEe
Confidence            8999999999999999999999999999999876          6665544332221 22677889998764   34456


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHH-HHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIM-TKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      .+.+|+|.||+++|.++||++||......+.. .+..... .......+..      ...+++.+..+.++-|.++|++|
T Consensus       203 ~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~-~rk~~~~P~~------F~~fs~~a~r~Fkk~lt~~~~dr  275 (378)
T KOG1345|consen  203 NPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWL-KRKNPALPKK------FNPFSEKALRLFKKSLTPRFKDR  275 (378)
T ss_pred             cccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHh-cccCccCchh------hcccCHHHHHHHHHhcCCccccc
Confidence            78899999999999999999999865443332 2222222 1111122221      15678889999999999999998

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.92  E-value=7.6e-24  Score=160.01  Aligned_cols=149  Identities=26%  Similarity=0.412  Sum_probs=126.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC-CcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG-ITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   88 (245)
                      ..+.+.+|++.+++++|+|++++++++...+..++++|++++++|.+++...                 .. +++..+..
T Consensus        40 ~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-----------------~~~~~~~~~~~  102 (225)
T smart00221       40 QREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKK-----------------GGKLSEEEARF  102 (225)
T ss_pred             HHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhc-----------------ccCCCHHHHHH
Confidence            6788999999999999999999999998888999999999999997777531                 12 77888999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----CCCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.+++.++.+||+.+++|+|++|.||+++.        ||.+......     ....++..|++||.+. +...++.++
T Consensus       103 ~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~~  181 (225)
T smart00221      103 YLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLL-GGKGYGEAV  181 (225)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhc-CCCCCCchh
Confidence            9999999999999999999999999999986        5544433332     2344577899999984 236678899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCC
Q 037274          156 DIWLIGITALQFPCGGLPVSR  176 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~  176 (245)
                      |+|+||++++++++|+.||..
T Consensus       182 Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      182 DIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             hHHHHHHHHHHHHHCCCCccc
Confidence            999999999999999999976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.90  E-value=8.7e-24  Score=156.25  Aligned_cols=203  Identities=16%  Similarity=0.259  Sum_probs=151.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .....+|..|.-.|+...||||++++|.|.+..++.++..|++.|+|+.++..               ....-.+..+..
T Consensus       228 ~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe---------------~t~vvvd~sqav  292 (448)
T KOG0195|consen  228 ARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHE---------------QTSVVVDHSQAV  292 (448)
T ss_pred             hhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhc---------------CccEEEecchHH
Confidence            33456788899999999999999999999999999999999999999877763               223345667788


Q ss_pred             HHHHHHHHHHHHHHhCC-ccc-ccCCCCceeccc-------ccCccccccCCCCccccccccCceecCCCCC-CCchhhH
Q 037274           88 IAHKETLKGLSYLQGEG-LFH-KNISAGHILHNI-------FNDDTRNWISSSSSITTWAAAPEVVNFGDDY-YSCKSDI  157 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~-ivH-~dlkp~nil~~~-------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~~~Dv  157 (245)
                      .++.+++.|++|||+.. ++- -.|++..++++.       .+..+...........|.|++||.++..... .-..+|+
T Consensus       293 ~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawmspealqrkped~n~raadm  372 (448)
T KOG0195|consen  293 RFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADM  372 (448)
T ss_pred             HHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCCHHHHhcCchhcchhhhhH
Confidence            89999999999999964 443 358888899887       2222222222233448999999999862222 2357999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      |||++++||+.|+..||....+.+   .-+.....+..         ...+.+.+..+..+++-|+..||.+||.++.++
T Consensus       373 wsfaillwel~trevpfadlspme---cgmkialeglr---------v~ippgis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  373 WSFAILLWELNTREVPFADLSPME---CGMKIALEGLR---------VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             HHHHHHHHHhhccccccccCCchh---hhhhhhhcccc---------ccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence            999999999999999999854433   22221111111         122367889999999999999999999988764

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=1.2e-24  Score=183.57  Aligned_cols=206  Identities=23%  Similarity=0.216  Sum_probs=149.8

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKET   93 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi   93 (245)
                      +..|.-+-..|.|+|++.....+.+.....-.||||++ +|..++..                 ...+...++..++.|+
T Consensus       368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~-----------------~~~~~~~e~~c~fKqL  429 (601)
T KOG0590|consen  368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMS-----------------NGKLTPLEADCFFKQL  429 (601)
T ss_pred             hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhc-----------------ccccchhhhhHHHHHH
Confidence            66677777888999998777666555544445999998 99766653                 1356777888899999


Q ss_pred             HHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc--------CCCCccccccccCceecCCCCCCC-chhh
Q 037274           94 LKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI--------SSSSSITTWAAAPEVVNFGDDYYS-CKSD  156 (245)
Q Consensus        94 ~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~-~~~D  156 (245)
                      +.|+.|+|+.|+.|||+|++|+++..        ||.+.....        .....|...|+|||.+.+  ..|. ...|
T Consensus       430 ~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~--~~ydpr~vD  507 (601)
T KOG0590|consen  430 LRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTG--KEYDPRAVD  507 (601)
T ss_pred             HHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccc--cccCcchhh
Confidence            99999999999999999999999987        443322211        123456889999999997  5565 4699


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      |||.|+++..|.+|+.||......+.... ......    ..............++.+.+.++.+||+++|.+|.|+++|
T Consensus       508 iwS~~ii~~~m~~~~~~Wk~a~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i  582 (601)
T KOG0590|consen  508 VWSCGIIYICMILGRFPWKVAKKSDNSFK-TNNYSD----QRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQI  582 (601)
T ss_pred             hhhccceEEEEecCCCccccccccccchh-hhcccc----ccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHH
Confidence            99999999999999999976433322110 000000    0111111122225577888999999999999999999999


Q ss_pred             hhcccccc
Q 037274          237 VLQEMWHF  244 (245)
Q Consensus       237 l~~~~f~~  244 (245)
                      ++.+||+.
T Consensus       583 ~~d~W~~~  590 (601)
T KOG0590|consen  583 LNDEWIRS  590 (601)
T ss_pred             hhChHhhh
Confidence            99999973

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=5.6e-21  Score=148.22  Aligned_cols=179  Identities=18%  Similarity=0.216  Sum_probs=126.6

Q ss_pred             CCCCeeeEEEEEEeC---------------------------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhcc
Q 037274           25 SHPNIIPIYKTMISQ---------------------------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRH   77 (245)
Q Consensus        25 ~h~~Iv~~~~~~~~~---------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~   77 (245)
                      +|||||++.++|.++                           ..+|+||.-.+. +|..++..                 
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~-----------------  335 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT-----------------  335 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc-----------------
Confidence            599999999888542                           248999988875 88776653                 


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc------------ccCcccccc---------CC-CCccc
Q 037274           78 RYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWI---------SS-SSSIT  135 (245)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~---------~~-~~~~~  135 (245)
                       ...+......++.|+++|+.|||.+|+.|||+|++|||+..            ||-..-...         .. ..-|.
T Consensus       336 -~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGN  414 (598)
T KOG4158|consen  336 -RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGN  414 (598)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCc
Confidence             23444556678899999999999999999999999999753            553221111         11 22336


Q ss_pred             cccccCceecCCCCC---C-CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccc
Q 037274          136 TWAAAPEVVNFGDDY---Y-SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTL  211 (245)
Q Consensus       136 ~~y~aPE~~~~~~~~---~-~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (245)
                      ...||||........   . -.++|.|+.|.+.||+++...||.+......-.+..+..      +.+.      .+..+
T Consensus       415 a~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~------qLPa------lp~~v  482 (598)
T KOG4158|consen  415 AKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES------QLPA------LPSRV  482 (598)
T ss_pred             ceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh------hCCC------CcccC
Confidence            778999998752111   1 258999999999999999999998844322211111110      1111      12668


Q ss_pred             cHHHHHHHHHhcCCCCCCCccHH
Q 037274          212 SKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       212 ~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      ++.+++++...|+.||++|+++.
T Consensus       483 pp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  483 PPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             ChHHHHHHHHHhcCCccccCCcc
Confidence            89999999999999999999854

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.85  E-value=1.1e-21  Score=168.28  Aligned_cols=198  Identities=18%  Similarity=0.184  Sum_probs=138.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..++-..|++ ...+++||++++--...++...|+|-+|+.. +|+|-+..                 ++.+..-+.+-|
T Consensus        65 ~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlST-----------------RPFL~~iEKkWi  125 (1431)
T KOG1240|consen   65 PFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLST-----------------RPFLVLIEKKWI  125 (1431)
T ss_pred             HHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhcc-----------------chHHHHHHHHHH
Confidence            3444455555 5666899999988877788888999999986 88665542                 445667777889


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-----------CCCCccccccccCceecCC---
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-----------SSSSSITTWAAAPEVVNFG---  147 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~---  147 (245)
                      +-|++.||..+|..|++|||||.+|||++.        |..-+....           .++...-.+|.|||-+..+   
T Consensus       126 aFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~  205 (1431)
T KOG1240|consen  126 AFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGK  205 (1431)
T ss_pred             HHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccc
Confidence            999999999999999999999999999987        322221111           1122235689999987641   


Q ss_pred             -----CCC-CCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHH
Q 037274          148 -----DDY-YSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       148 -----~~~-~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  220 (245)
                           ... .+++.||||+||+++|+++ |+++|..    ..+-++....  ....+.       ....-.+..++++|.
T Consensus       206 ~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~~--~~~~e~-------~Le~Ied~~~Rnlil  272 (1431)
T KOG1240|consen  206 TSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSGN--ADDPEQ-------LLEKIEDVSLRNLIL  272 (1431)
T ss_pred             cccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhccC--ccCHHH-------HHHhCcCccHHHHHH
Confidence                 112 6789999999999999987 6788753    1111111110  000000       000223457899999


Q ss_pred             HhcCCCCCCCccHHHHhhc
Q 037274          221 ICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~  239 (245)
                      .|++.||.+|.++++.|+.
T Consensus       273 ~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  273 SMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHccCchhccCHHHHHHh
Confidence            9999999999999999875

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.84  E-value=7.7e-21  Score=154.25  Aligned_cols=198  Identities=18%  Similarity=0.228  Sum_probs=142.6

Q ss_pred             HhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHH
Q 037274           21 YKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYL  100 (245)
Q Consensus        21 l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l  100 (245)
                      |+.+.|.|+.+++|.+.++...+.|.++|..|+|.+.+..                ....+++-....+.+++++||.|+
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~----------------~~~~~d~~F~~s~~rdi~~Gl~yl   64 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN----------------EDIKLDYFFILSFIRDISKGLAYL   64 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc----------------cccCccHHHHHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999777753                234566667778889999999999


Q ss_pred             HhCCc-ccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCC--CC---CCCchhhHHHH
Q 037274          101 QGEGL-FHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFG--DD---YYSCKSDIWLI  160 (245)
Q Consensus       101 h~~~i-vH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~--~~---~~~~~~Dvwsl  160 (245)
                      |+..+ .|+.+++.|++++.        ||+.......      ........|.|||.+.+.  ..   ..+.+.|+|||
T Consensus        65 h~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~  144 (484)
T KOG1023|consen   65 HNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSF  144 (484)
T ss_pred             hcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehH
Confidence            99876 89999999999887        6665444221      111125678999999862  11   14678999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      |++++|++++..||..........++........  ........... ....+++..++..||..+|.+||+++++-
T Consensus       145 ~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~--~~~~rP~i~~~-~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  145 GIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGG--SNPFRPSIELL-NELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             HHHHHHHHhccCccccccccCChHHHHHHHHhcC--CCCcCcchhhh-hhcchHHHHHHHHhcccChhhCccHHHHH
Confidence            9999999999999986433222122222211100  10001111111 24556899999999999999999999874

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.84  E-value=5.6e-19  Score=140.74  Aligned_cols=213  Identities=25%  Similarity=0.347  Sum_probs=158.2

Q ss_pred             HHHHHHHHHHHHhhCCCC-CeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHP-NIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~-~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ....+.+|+.+++.+.|+ +|+++++.+...+..+++++++.++++.+++......              ..++......
T Consensus        40 ~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~~~~  105 (384)
T COG0515          40 EVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRK--------------GPLSESEALF  105 (384)
T ss_pred             HHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccc--------------cCCCHHHHHH
Confidence            577899999999999988 7999999997777789999999999997555421100              3688899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCcccccc----------CCCCccccccccCceecCCC-
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWI----------SSSSSITTWAAAPEVVNFGD-  148 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~-  148 (245)
                      +..|++.++.++|..+++|||+||+||+++.         ||.+.....          .....++..|+|||.+.+.. 
T Consensus       106 ~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~  185 (384)
T COG0515         106 ILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSL  185 (384)
T ss_pred             HHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCC
Confidence            9999999999999999999999999999886         665542222          23455699999999998621 


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCc---hHHHHHHHhcCCCC-ccCCCCCCCCCCCCcccccHHHHHHHHHhcC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQD---LDIMTKMLMKQPKS-TSLQVAPNEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      ...+...|+||+|++++++++|..||.....   .............. ........     ........+.+++..++.
T Consensus       186 ~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  260 (384)
T COG0515         186 AYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPS-----NPELISKAASDLLKKLLA  260 (384)
T ss_pred             CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCcc-----ccchhhHHHHHHHHHHHh
Confidence            4678999999999999999999999877653   22222222222111 00000000     001223578999999999


Q ss_pred             CCCCCCccHHHHhhccc
Q 037274          225 PDPAKRPAAEAQVLQEM  241 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~~~  241 (245)
                      .+|..|.+..+...+++
T Consensus       261 ~~~~~r~~~~~~~~~~~  277 (384)
T COG0515         261 KDPKNRLSSSSDLSHDL  277 (384)
T ss_pred             cCchhcCCHHHHhhchH
Confidence            99999999988776644

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1.1e-20  Score=154.03  Aligned_cols=192  Identities=17%  Similarity=0.191  Sum_probs=158.3

Q ss_pred             HHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           13 KLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        13 ~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      ....|-.++...+ ||.++++...+++++..++++++..+|.|-.                 .......+++.....+..
T Consensus        42 ~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft-----------------~l~~~~~f~~~~~~~~~a  104 (612)
T KOG0603|consen   42 HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFT-----------------RLSKEVMFDELDVAFYLA  104 (612)
T ss_pred             ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhh-----------------ccccCCchHHHHHHHHHH
Confidence            4456777888886 9999999999999999999999999988822                 222356678888888999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCccccccccCceecCCCCCCCchhhHHHHHHH
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGIT  163 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~  163 (245)
                      .++-++.++|+.+++++|+|++||+++.        ||+++........+||.-|||||.+++    ....+|-||||++
T Consensus       105 elaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~g----h~~a~D~ws~gvl  180 (612)
T KOG0603|consen  105 ELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIING----HLSAADWWSFGVL  180 (612)
T ss_pred             HHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHhhhc----cCCcccchhhhhh
Confidence            9999999999999999999999999876        777776666666688999999999984    6789999999999


Q ss_pred             HHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----HHHHhh
Q 037274          164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----AEAQVL  238 (245)
Q Consensus       164 l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~~l~  238 (245)
                      ++++++|..||..    +.+..+.....     .         .+...+...++++..++..+|.+|.-     ..++.+
T Consensus       181 ~felltg~~pf~~----~~~~~Il~~~~-----~---------~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~  242 (612)
T KOG0603|consen  181 AFELLTGTLPFGG----DTMKRILKAEL-----E---------MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQ  242 (612)
T ss_pred             HHHHhhCCCCCch----HHHHHHhhhcc-----C---------CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhc
Confidence            9999999999998    45444443221     1         11557788999999999999999985     478899


Q ss_pred             ccccc
Q 037274          239 QEMWH  243 (245)
Q Consensus       239 ~~~f~  243 (245)
                      |++|.
T Consensus       243 h~f~~  247 (612)
T KOG0603|consen  243 HEFFQ  247 (612)
T ss_pred             cchhe
Confidence            99875

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.79  E-value=3.3e-18  Score=136.07  Aligned_cols=199  Identities=15%  Similarity=0.057  Sum_probs=147.7

Q ss_pred             HHHHHHHHHhhCCC----CCeeeEEEEE-EeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274           13 KLAREIYRYKHLSH----PNIIPIYKTM-ISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus        13 ~~~~E~~~l~~l~h----~~Iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..|+.++..++.    +++..+++.. ..+...++||+.+. .+|.++...               .....++..+..
T Consensus        62 ~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G-~sL~dl~~~---------------~~~~~fs~~T~l  125 (322)
T KOG1164|consen   62 VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLG-PSLEDLRKR---------------NPPGRFSRKTVL  125 (322)
T ss_pred             cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccC-ccHHHHHHh---------------CCCCCcCHhHHH
Confidence            68889999999873    5888888887 46777899998885 599665532               224679999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc-------------ccCcc--ccccC------------CCCcccccccc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------------FNDDT--RNWIS------------SSSSITTWAAA  140 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------------f~~~~--~~~~~------------~~~~~~~~y~a  140 (245)
                      .++.|++.+|.++|+.|++||||||.|++++.             ||+++  .....            ....||..|++
T Consensus       126 ~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S  205 (322)
T KOG1164|consen  126 RIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYAS  205 (322)
T ss_pred             HHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCcccccc
Confidence            99999999999999999999999999999863             88877  21111            12337999999


Q ss_pred             CceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHH
Q 037274          141 PEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       141 PE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  220 (245)
                      +....+  ...+.+.|+||++.++.++..|..||.......................         .....+.++..+..
T Consensus       206 ~~~H~~--~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~  274 (322)
T KOG1164|consen  206 INVHLG--IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDR---------FGDLKPEEFAKILE  274 (322)
T ss_pred             HHHhCC--CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhcccc---------ccCCChHHHHHHHH
Confidence            998887  6689999999999999999999999977554333332222221111100         11345577888888


Q ss_pred             HhcCCCCCCCccHHHHhh
Q 037274          221 ICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~  238 (245)
                      .+-..+...+|....+..
T Consensus       275 ~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  275 YIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             HhhccCCcCCCCHHHHHH
Confidence            888888889998776643

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.79  E-value=7.9e-20  Score=139.83  Aligned_cols=160  Identities=18%  Similarity=0.233  Sum_probs=99.3

Q ss_pred             eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccccc
Q 037274           42 LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN  121 (245)
Q Consensus        42 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~f~  121 (245)
                      .+++++-+. ++|.+++.-          ..................+..|+++.+++||..|+||+||+|+|++++.-|
T Consensus       114 ~~~l~P~~~-~dL~~~~~~----------l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G  182 (288)
T PF14531_consen  114 RFLLMPRAQ-GDLQDLVEA----------LFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDG  182 (288)
T ss_dssp             EEEEEE--S-EEHHHHHHH----------HHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS
T ss_pred             hhhccchhh-hcHHHHHHH----------HhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCC
Confidence            467777775 499887751          111111112234445566778999999999999999999999999998822


Q ss_pred             --------CccccccCCC-CccccccccCceecCC------CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHH
Q 037274          122 --------DDTRNWISSS-SSITTWAAAPEVVNFG------DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKM  186 (245)
Q Consensus       122 --------~~~~~~~~~~-~~~~~~y~aPE~~~~~------~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~  186 (245)
                              .......... ...+..|.|||.....      ...++.+.|.|+||+++|.+|++..||........... 
T Consensus       183 ~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-  261 (288)
T PF14531_consen  183 GVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-  261 (288)
T ss_dssp             -EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-
T ss_pred             CEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-
Confidence                    2211111111 2235678899977541      23478899999999999999999999987433221111 


Q ss_pred             HhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          187 LMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                                       ........++.++.+|..+|+.+|.+|
T Consensus       262 -----------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  262 -----------------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             -----------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             -----------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence                             111224688999999999999999987

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.78  E-value=5.5e-19  Score=128.65  Aligned_cols=209  Identities=14%  Similarity=0.104  Sum_probs=155.9

Q ss_pred             ccccccHHHHHHHHHHHHHHhhCCCC-CeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            2 IDINHQAEEYAKLAREIYRYKHLSHP-NIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         2 ~~~~~~~~~~~~~~~E~~~l~~l~h~-~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      |+++.+.....++..|..+++.|++. .|..+..+..+.+.-.+||+... .||++++..+                ...
T Consensus        45 iK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLG-PsLEdLfnfC----------------~R~  107 (341)
T KOG1163|consen   45 IKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLG-PSLEDLFNFC----------------SRR  107 (341)
T ss_pred             EEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeeccC-ccHHHHHHHH----------------hhh
Confidence            45666666777899999999999864 45555555556667899999885 5999988642                346


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC-----------CCcccccc
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS-----------SSSITTWA  138 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~-----------~~~~~~~y  138 (245)
                      ++..+++..+.|++.-++|+|.++++||||||+|+|...           ||+++......           ...||..|
T Consensus       108 ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRY  187 (341)
T KOG1163|consen  108 FTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARY  187 (341)
T ss_pred             hhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeee
Confidence            888999999999999999999999999999999999775           99988765544           23458888


Q ss_pred             ccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHH
Q 037274          139 AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM  218 (245)
Q Consensus       139 ~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  218 (245)
                      ++-....+  ...+.+.|+=|+|.+|.+.--|..||.+.......++.....      +............++|.++...
T Consensus       188 ASinAh~g--~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~------EkK~s~~ie~LC~G~P~EF~my  259 (341)
T KOG1163|consen  188 ASINAHLG--IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKIS------EKKMSTPIEVLCKGFPAEFAMY  259 (341)
T ss_pred             hhhhhhhh--hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHH------HhhcCCCHHHHhCCCcHHHHHH
Confidence            88777665  556788999999999999999999999865544433332222      1111111122236788899999


Q ss_pred             HHHhcCCCCCCCccHHH
Q 037274          219 VKICLAPDPAKRPAAEA  235 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~  235 (245)
                      +..|-..--++-|...-
T Consensus       260 l~Y~R~L~F~E~Pdy~y  276 (341)
T KOG1163|consen  260 LNYCRGLGFEEKPDYMY  276 (341)
T ss_pred             HHHHhhcCCCCCCcHHH
Confidence            99998887777776543

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.74  E-value=2e-17  Score=125.77  Aligned_cols=209  Identities=16%  Similarity=0.107  Sum_probs=154.5

Q ss_pred             ccccccHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            2 IDINHQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         2 ~~~~~~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      |+.++.....-++..|.+.++.|. .+.|...|-+-..+-.-.+|+|... .||+|+++-+                +..
T Consensus        58 IKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLG-PSLEDLFD~C----------------gR~  120 (449)
T KOG1165|consen   58 IKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLG-PSLEDLFDLC----------------GRR  120 (449)
T ss_pred             EEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhC-cCHHHHHHHh----------------cCc
Confidence            566666777888999999999996 5788887765555556678888874 5998888632                467


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-------------ccCccccccCC-----------CCcccc
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------------FNDDTRNWISS-----------SSSITT  136 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------------f~~~~~~~~~~-----------~~~~~~  136 (245)
                      |+..++..++.|++.-++++|++.+|.|||||+|+||+.             ||.++......           ...||.
T Consensus       121 FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTA  200 (449)
T KOG1165|consen  121 FSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTA  200 (449)
T ss_pred             ccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccce
Confidence            999999999999999999999999999999999999986             89888766555           234589


Q ss_pred             ccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHH
Q 037274          137 WAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFW  216 (245)
Q Consensus       137 ~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (245)
                      .||+-..-.+  ...+.+-|+=|||.++.+.+-|..||.+......-++.....      .............+++.++.
T Consensus       201 RYMSINTHlG--rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIG------e~Kr~T~i~~Lc~g~P~efa  272 (449)
T KOG1165|consen  201 RYMSINTHLG--REQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIG------ETKRSTPIEVLCEGFPEEFA  272 (449)
T ss_pred             eeeEeecccc--chhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhc------cccccCCHHHHHhcCHHHHH
Confidence            9999887777  557899999999999999999999998754433322222211      11111111122255677777


Q ss_pred             HHHHHhcCCCCCCCccHHH
Q 037274          217 NMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       217 ~li~~~l~~~p~~Rpt~~~  235 (245)
                      .-++..-..+-.+-|..+-
T Consensus       273 ~Yl~yvR~L~F~E~PDYdy  291 (449)
T KOG1165|consen  273 TYLRYVRRLDFFETPDYDY  291 (449)
T ss_pred             HHHHHHHhcCcccCCCHHH
Confidence            7777666666666676543

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.71  E-value=7.3e-18  Score=135.16  Aligned_cols=166  Identities=19%  Similarity=0.287  Sum_probs=117.5

Q ss_pred             eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-
Q 037274           41 QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-  119 (245)
Q Consensus        41 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-  119 (245)
                      .+++.|++|..++|.+++....              ....-+....+.+..|++.|+.|   ++.+|+|+||.||++.. 
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~--------------~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d  392 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRR--------------TGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDD  392 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCC--------------cccccchhHHHHHHHhhccchhh---ccchhhhccccccccccc
Confidence            4889999999999988876322              23445677888899999999999   89999999999999876 


Q ss_pred             -------ccCccccccCC----------CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhC-CCCCCCCCchH
Q 037274          120 -------FNDDTRNWISS----------SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG-GLPVSRRQDLD  181 (245)
Q Consensus       120 -------f~~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g-~~p~~~~~~~~  181 (245)
                             ||+........          ...+|..||+||.+.+  ..|+.++||||||++|+|++.- ...+..   ..
T Consensus       393 ~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g--~~y~~kvdIyaLGlil~EL~~~f~T~~er---~~  467 (516)
T KOG1033|consen  393 DQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG--QQYSEKVDIYALGLILAELLIQFSTQFER---IA  467 (516)
T ss_pred             hhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhh--hhhhhhcchhhHHHHHHHHHHHhccHHHH---HH
Confidence                   77655443332          3556999999999998  7899999999999999999872 112211   01


Q ss_pred             HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccc
Q 037274          182 IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEM  241 (245)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~  241 (245)
                      .+..+...       .+++.     ....+ +.-..|+..++.+.|.+||++.+.-.|.|
T Consensus       468 t~~d~r~g-------~ip~~-----~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~  514 (516)
T KOG1033|consen  468 TLTDIRDG-------IIPPE-----FLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEF  514 (516)
T ss_pred             hhhhhhcC-------CCChH-----HhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhh
Confidence            11111111       11100     00112 33458999999999999997766655554

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.70  E-value=6e-17  Score=129.14  Aligned_cols=110  Identities=14%  Similarity=0.030  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeee-EEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIP-IYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~-~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ...+.+.+|+++|++|+|+||++ +++    .+..++||||+++++|.. +.                  .  ..   ..
T Consensus        63 ~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~~~~LVmE~~~G~~L~~-~~------------------~--~~---~~  114 (365)
T PRK09188         63 LARHLAAREIRALKTVRGIGVVPQLLA----TGKDGLVRGWTEGVPLHL-AR------------------P--HG---DP  114 (365)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCcEEEE----cCCcEEEEEccCCCCHHH-hC------------------c--cc---hH
Confidence            35677999999999999999985 443    246899999999999941 10                  0  00   13


Q ss_pred             HHHHHHHHHHHHHHhCCcccccC-CCCceeccc--------ccCccccccCC------------CCccccccccCceecC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNI-SAGHILHNI--------FNDDTRNWISS------------SSSITTWAAAPEVVNF  146 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dl-kp~nil~~~--------f~~~~~~~~~~------------~~~~~~~y~aPE~~~~  146 (245)
                      .++.|++.||.|||+.|++|||| ||+|||++.        ||++.......            ...+++.|+|||.+..
T Consensus       115 ~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        115 AWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             HHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            56789999999999999999999 999999964        88876443322            2233677899999875

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.69  E-value=3.3e-16  Score=114.37  Aligned_cols=137  Identities=12%  Similarity=0.008  Sum_probs=98.4

Q ss_pred             HHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           13 KLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        13 ~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      .+.+|+++|++|+ |++|.+++++    +..+++|+|+.|.+|.+...                       . ....++.
T Consensus        47 l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~-----------------------~-~~~~~~~   98 (218)
T PRK12274         47 LARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPP-----------------------R-GDLAYFR   98 (218)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhh-----------------------h-hhHHHHH
Confidence            5889999999995 5788888886    34699999999988843211                       0 0124668


Q ss_pred             HHHHHHHHHHhCCcccccC-CCCceeccc--------ccCccccccCCC-----------------CccccccccCceec
Q 037274           92 ETLKGLSYLQGEGLFHKNI-SAGHILHNI--------FNDDTRNWISSS-----------------SSITTWAAAPEVVN  145 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dl-kp~nil~~~--------f~~~~~~~~~~~-----------------~~~~~~y~aPE~~~  145 (245)
                      |++.+|.++|++|++|+|| ||+|||++.        ||++........                 ...++.+++|+...
T Consensus        99 qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~  178 (218)
T PRK12274         99 AARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERR  178 (218)
T ss_pred             HHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHh
Confidence            9999999999999999999 799999975        777764433221                 01155666665443


Q ss_pred             CCCCCCC-chhhHHHHHHHHHHHhhCCCCCCCCC
Q 037274          146 FGDDYYS-CKSDIWLIGITALQFPCGGLPVSRRQ  178 (245)
Q Consensus       146 ~~~~~~~-~~~DvwslG~~l~~~~~g~~p~~~~~  178 (245)
                      . ....+ ...+-++.|+-+|.++|++.+..+++
T Consensus       179 ~-l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        179 V-LKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             h-hccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            2 12233 45666799999999999998877644

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.68  E-value=6.4e-17  Score=139.00  Aligned_cols=139  Identities=18%  Similarity=0.299  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------------------CCCccccccccCcee
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------------------SSSSITTWAAAPEVV  144 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------------------~~~~~~~~y~aPE~~  144 (245)
                      +++.+++|||+.||+|||+||+|.+++.        ||+++...-.                   ...++||.|.|||++
T Consensus       151 dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi  230 (1205)
T KOG0606|consen  151 DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI  230 (1205)
T ss_pred             hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence            3478899999999999999999999887        5544322211                   133669999999999


Q ss_pred             cCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcC
Q 037274          145 NFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       145 ~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      .-  ..|+..+|-|++|+++|+.+-|+.||++++..+..............-           ...++++.+++|+++|+
T Consensus       231 lr--qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~-----------dea~p~Ea~dli~~LL~  297 (1205)
T KOG0606|consen  231 LR--QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE-----------DEALPPEAQDLIEQLLR  297 (1205)
T ss_pred             hh--hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc-----------CcCCCHHHHHHHHHHHH
Confidence            86  779999999999999999999999999988877776655544322211           15578999999999999


Q ss_pred             CCCCCCc---cHHHHhhccccc
Q 037274          225 PDPAKRP---AAEAQVLQEMWH  243 (245)
Q Consensus       225 ~~p~~Rp---t~~~~l~~~~f~  243 (245)
                      .+|..|.   .+-++.+|+||.
T Consensus       298 qnp~~Rlgt~ga~evk~h~ff~  319 (1205)
T KOG0606|consen  298 QNPLCRLGTGGALEVKQHGFFQ  319 (1205)
T ss_pred             hChHhhcccchhhhhhhcccee
Confidence            9999997   456678899885

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.68  E-value=4.5e-17  Score=121.20  Aligned_cols=126  Identities=10%  Similarity=0.042  Sum_probs=87.6

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEeC--------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMISQ--------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      +.+|++.+.++.|++|..+.+++...        +..+++|||++|.+|.++..                     +++  
T Consensus        82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------------------~~~--  138 (232)
T PRK10359         82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE---------------------ISE--  138 (232)
T ss_pred             HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh---------------------ccH--
Confidence            68999999999999999998886533        35899999999999955421                     112  


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceecccccCccccccCCCCccccccccCceecCCCCCCCchhhHHHHHHHHH
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITAL  165 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~  165 (245)
                        ....+++.++..+|+.|++|+|++|+|++++.-| ......+.............+...  ..++.++|+||||+.+.
T Consensus       139 --~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d~~vle--r~y~~~~di~~lg~~~~  213 (232)
T PRK10359        139 --DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKDRIDLE--RHYGIKNEIKDLGYYLL  213 (232)
T ss_pred             --HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhhHHHHHHH--hHhcccccccceeEeeh
Confidence              2356899999999999999999999999998755 222221111111111111112222  44668999999998877


Q ss_pred             HH
Q 037274          166 QF  167 (245)
Q Consensus       166 ~~  167 (245)
                      ..
T Consensus       214 ~~  215 (232)
T PRK10359        214 IY  215 (232)
T ss_pred             HH
Confidence            65

>PRK10345 hypothetical protein; Provisional

Probab=99.66  E-value=4.7e-16  Score=115.25  Aligned_cols=90  Identities=19%  Similarity=0.159  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHHhhC-----CCCCeeeEEEEEEeCc---e-eEEEeee--cccCCHHHHHhcCCCCChhhHHHHhhhccC
Q 037274           10 EYAKLAREIYRYKHL-----SHPNIIPIYKTMISQR---Q-LFYAEIA--CMIGSLDSIMTYRPLNSPAATQLIMSNRHR   78 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l-----~h~~Iv~~~~~~~~~~---~-~~lv~e~--~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~   78 (245)
                      ..+.+.+|+.+++.|     .||||+++||+++++.   . +.+|+||  +.+++|.+++..                  
T Consensus        39 ~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~------------------  100 (210)
T PRK10345         39 GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ------------------  100 (210)
T ss_pred             hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc------------------
Confidence            567899999999999     5799999999998873   3 4478999  557899887752                  


Q ss_pred             CCCcHHHHHHHHHHHHHHH-HHHHhCCcccccCCCCceeccc
Q 037274           79 YGITVDCLAIAHKETLKGL-SYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l-~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      ..+++.  ..++.|++.++ +|||+++|+||||||+||+++.
T Consensus       101 ~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~  140 (210)
T PRK10345        101 CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQR  140 (210)
T ss_pred             ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEec
Confidence            224444  34567888777 8999999999999999999865

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.63  E-value=3.6e-17  Score=138.56  Aligned_cols=212  Identities=20%  Similarity=0.208  Sum_probs=159.8

Q ss_pred             cHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .....+.+..|..+-+.+. |+|++.+++.....+..++++++..++++.+.+.               .......+...
T Consensus        60 ~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~---------------~~~~~~~~~~~  124 (601)
T KOG0590|consen   60 SEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKIS---------------HPDSTGTSSSS  124 (601)
T ss_pred             ccchhhhcCccccccccccccccccccCCccCCCcccccccCcccccccccccc---------------cCCccCCCCcc
Confidence            4456667777888888887 9999999999999999999999999999844331               11112456667


Q ss_pred             HHHHHHHHHHHHHHHH-hCCcccccCCCCceeccc---------ccCcccccc-CC------CCcc-ccccccCceecCC
Q 037274           86 LAIAHKETLKGLSYLQ-GEGLFHKNISAGHILHNI---------FNDDTRNWI-SS------SSSI-TTWAAAPEVVNFG  147 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh-~~~ivH~dlkp~nil~~~---------f~~~~~~~~-~~------~~~~-~~~y~aPE~~~~~  147 (245)
                      ...++.|+..++.|+| ..++.|+|++|+|.+++.         ||++..... ..      ..+| ++.|+|||...+ 
T Consensus       125 ~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~-  203 (601)
T KOG0590|consen  125 ASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSG-  203 (601)
T ss_pred             hhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccc-
Confidence            7788999999999999 999999999999999876         555443333 11      3456 899999999985 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      .....+..|+||.|+++.-+.+|..||............+...         ............+....+++.+++..+|
T Consensus       204 ~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~k~l~~~~  274 (601)
T KOG0590|consen  204 KAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSN---------KGRFTQLPWNSISDQAHDLLHKILKENP  274 (601)
T ss_pred             hhhcCCCcccccccccccccccCCCCccccccccccceeeccc---------ccccccCccccCChhhhhcccccccCCc
Confidence            4456789999999999999999999998744433111111111         0111122236778889999999999999


Q ss_pred             CCCccHHHHhhccccc
Q 037274          228 AKRPAAEAQVLQEMWH  243 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~f~  243 (245)
                      ..|.+.+++-.++|+.
T Consensus       275 ~~r~s~~~~~~d~~~~  290 (601)
T KOG0590|consen  275 SNRLSIEELKLDNWLS  290 (601)
T ss_pred             hhcccccccccccccc
Confidence            9999999999999974

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=1.5e-15  Score=115.66  Aligned_cols=191  Identities=16%  Similarity=0.185  Sum_probs=132.5

Q ss_pred             HHHhhCCCCCeeeEEEEEEeC-----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHH
Q 037274           19 YRYKHLSHPNIIPIYKTMISQ-----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKET   93 (245)
Q Consensus        19 ~~l~~l~h~~Iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi   93 (245)
                      ..+-++-|.|||+++.+|.+.     .....+.||+..|++.++++....+             ...+....+.+++.||
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-------------~~a~~~~~wkkw~tqI  185 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-------------QKALFQKAWKKWCTQI  185 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-------------hhhhhHHHHHHHHHHH
Confidence            445566799999999988543     3478889999999999988743221             3446677788899999


Q ss_pred             HHHHHHHHhC--CcccccCCCCceecccccCccccccCC----------------CCccccccccCceecCCCCCCCchh
Q 037274           94 LKGLSYLQGE--GLFHKNISAGHILHNIFNDDTRNWISS----------------SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        94 ~~~l~~lh~~--~ivH~dlkp~nil~~~f~~~~~~~~~~----------------~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      +.||.|||+.  -++|+++..+.|++..-|+.+......                ...+.++|.+||.-..  ...+..+
T Consensus       186 lsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~--tn~~~a~  263 (458)
T KOG1266|consen  186 LSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTT--TNTTGAS  263 (458)
T ss_pred             HhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcc--cccccch
Confidence            9999999987  489999999999887644433222111                1223678899998765  5677899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCch-HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDL-DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      |||+||+...+|.-+..--...... .....+.....                 ......-++++.+|++.+|..||++.
T Consensus       264 dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~-----------------~len~lqr~~i~kcl~~eP~~rp~ar  326 (458)
T KOG1266|consen  264 DIYKFGMCALEMAILEIQSTNSESKVEVEENIANVII-----------------GLENGLQRGSITKCLEGEPNGRPDAR  326 (458)
T ss_pred             hhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhee-----------------eccCccccCcCcccccCCCCCCcchh
Confidence            9999999999998765431111111 11111111100                 11112236789999999999999999


Q ss_pred             HHhhccc
Q 037274          235 AQVLQEM  241 (245)
Q Consensus       235 ~~l~~~~  241 (245)
                      +++.||.
T Consensus       327 ~llfHpl  333 (458)
T KOG1266|consen  327 LLLFHPL  333 (458)
T ss_pred             hhhcCce
Confidence            9999986

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.52  E-value=5.3e-14  Score=103.30  Aligned_cols=88  Identities=11%  Similarity=-0.028  Sum_probs=66.7

Q ss_pred             HHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHH
Q 037274           13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKE   92 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q   92 (245)
                      ....|++.+.++.++++....... . ...++||||++++++.....                 ....++...+..++.|
T Consensus        65 ~~~~E~~~l~~l~~~~v~~p~~~~-~-~~~~iVmE~i~g~~l~~~~~-----------------~~~~~~~~~~~~i~~q  125 (190)
T cd05147          65 WAEKEMRNLKRLVTAGIPCPEPIL-L-KSHVLVMEFIGDDGWAAPRL-----------------KDAPLSESKARELYLQ  125 (190)
T ss_pred             HHHHHHHHHHHHHHCCCCCCcEEE-e-cCCEEEEEEeCCCCCcchhh-----------------hcCCCCHHHHHHHHHH
Confidence            345699999999877764433322 2 22489999999877632211                 1245788899999999


Q ss_pred             HHHHHHHH-HhCCcccccCCCCceeccc
Q 037274           93 TLKGLSYL-QGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        93 i~~~l~~l-h~~~ivH~dlkp~nil~~~  119 (245)
                      ++.+|.++ |+.|++||||||+||+++.
T Consensus       126 i~~~L~~l~H~~giiHrDlkP~NIli~~  153 (190)
T cd05147         126 VIQIMRILYQDCRLVHADLSEYNLLYHD  153 (190)
T ss_pred             HHHHHHHHHHhCCcccCCCCHHHEEEEC
Confidence            99999999 7999999999999999974

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.46  E-value=4.4e-13  Score=98.67  Aligned_cols=88  Identities=13%  Similarity=0.055  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      ..+..|.+.+.++.|++|.....+....  .++||||++++++....              .   ....++......++.
T Consensus        64 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~--------------l---~~~~~~~~~~~~i~~  124 (190)
T cd05145          64 AWAEKEFRNLKRLYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPR--------------L---KDVPLEEEEAEELYE  124 (190)
T ss_pred             HHHHHHHHHHHHHHhCCCCCceEEEecC--CEEEEEEecCCCchhhh--------------h---hhccCCHHHHHHHHH
Confidence            3456899999999999875444433222  48999999987552211              1   123466778889999


Q ss_pred             HHHHHHHHHHh-CCcccccCCCCceecc
Q 037274           92 ETLKGLSYLQG-EGLFHKNISAGHILHN  118 (245)
Q Consensus        92 qi~~~l~~lh~-~~ivH~dlkp~nil~~  118 (245)
                      |++.++.++|+ .|++|+||||+||+++
T Consensus       125 ~l~~~l~~lH~~~givHrDlkP~NIll~  152 (190)
T cd05145         125 QVVEQMRRLYQEAGLVHGDLSEYNILYH  152 (190)
T ss_pred             HHHHHHHHHHHhCCEecCCCChhhEEEE
Confidence            99999999999 9999999999999986

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.38  E-value=5.8e-13  Score=116.31  Aligned_cols=134  Identities=14%  Similarity=0.113  Sum_probs=104.7

Q ss_pred             HHHhhCC---CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHH
Q 037274           19 YRYKHLS---HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLK   95 (245)
Q Consensus        19 ~~l~~l~---h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~   95 (245)
                      +++.+|+   -+.|..+..+..-.+.-++|++|.+.|||-+++.                 .....++..+..+..|++.
T Consensus       743 q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N-----------------~~~~m~e~lv~~~~~qml~  805 (974)
T KOG1166|consen  743 QVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLIN-----------------TNKVMDEYLVMFFSCQMLR  805 (974)
T ss_pred             HHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhc-----------------cCCCCCchhhhHHHHHHHH
Confidence            3445554   3456666666666778899999999999966664                 2466888899999999999


Q ss_pred             HHHHHHhCCcccccCCCCceeccc---------------ccCccccccCC------CCccccccccCceecCCCCCCCch
Q 037274           96 GLSYLQGEGLFHKNISAGHILHNI---------------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        96 ~l~~lh~~~ivH~dlkp~nil~~~---------------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .+..||..+|||+||||+|+|+..               ||-+.-.....      ....|-.+-.+|+..+  ..|+..
T Consensus       806 ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~g--rpWtYq  883 (974)
T KOG1166|consen  806 IVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG--RPWTYQ  883 (974)
T ss_pred             HHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcC--CCCchh
Confidence            999999999999999999999876               44432221111      1223777889999998  789999


Q ss_pred             hhHHHHHHHHHHHhhCC
Q 037274          155 SDIWLIGITALQFPCGG  171 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~  171 (245)
                      +|.|.|+.+++-|+.|+
T Consensus       884 ~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  884 IDYFGLAATVHVMLFGK  900 (974)
T ss_pred             hhhHHHHHHHHHHHHHH
Confidence            99999999999999986

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.36  E-value=4.2e-12  Score=107.82  Aligned_cols=83  Identities=6%  Similarity=-0.006  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|++++++++|++|+....+....+..++||||+++++|.+++.                         ....++
T Consensus       380 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~-------------------------~~~~~~  434 (535)
T PRK09605        380 TERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE-------------------------GNPELV  434 (535)
T ss_pred             HHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH-------------------------HHHHHH
Confidence            4668899999999999999887777777777899999999999966553                         234578


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceecc
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHN  118 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~  118 (245)
                      .+++.+|.+||+.|++||||||+||+++
T Consensus       435 ~~i~~~L~~lH~~giiHrDlkp~NILl~  462 (535)
T PRK09605        435 RKVGEIVAKLHKAGIVHGDLTTSNFIVR  462 (535)
T ss_pred             HHHHHHHHHHHhCCCccCCCChHHEEEE
Confidence            9999999999999999999999999984

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.34  E-value=6.5e-12  Score=94.12  Aligned_cols=87  Identities=8%  Similarity=0.062  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ...+.+|+.++..+.|++|.....++...+..+++|||++|++|.+++..                    ... ....++
T Consensus        43 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~--------------------~~~-~~~~i~  101 (211)
T PRK14879         43 RERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS--------------------NGM-EELELS  101 (211)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh--------------------ccH-HHHHHH
Confidence            35688899999999999988777777677788999999999999766642                    011 667889


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceecc
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHN  118 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~  118 (245)
                      .+++.+|.++|+.|++|+|++|.||+++
T Consensus       102 ~~i~~~l~~lH~~~i~H~Dl~p~Nil~~  129 (211)
T PRK14879        102 REIGRLVGKLHSAGIIHGDLTTSNMILS  129 (211)
T ss_pred             HHHHHHHHHHHhCCcccCCCCcccEEEE
Confidence            9999999999999999999999999986

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.30  E-value=1.4e-11  Score=102.28  Aligned_cols=136  Identities=20%  Similarity=0.250  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+...+-+..|+.|+||||+++++.++.++..|+|+|-+.  .|..+++.                    +....+.-
T Consensus        51 ~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~--------------------l~~~~v~~  108 (690)
T KOG1243|consen   51 EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE--------------------LGKEEVCL  108 (690)
T ss_pred             hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH--------------------hHHHHHHH
Confidence            556778888899999999999999999999999999999996  57555542                    22455666


Q ss_pred             HHHHHHHHHHHHH-hCCcccccCCCCceeccc------ccCccccccCCCC------ccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQ-GEGLFHKNISAGHILHNI------FNDDTRNWISSSS------SITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh-~~~ivH~dlkp~nil~~~------f~~~~~~~~~~~~------~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .+.||+.||.||| +.+++|+||.-..|+++.      .|+..........      ...-.|..|+.+..    -.-..
T Consensus       109 Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~----s~~s~  184 (690)
T KOG1243|consen  109 GLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP----SEWSI  184 (690)
T ss_pred             HHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc----cccch
Confidence            7899999999998 567999999999999987      2222211111111      01223455555543    11457


Q ss_pred             hHHHHHHHHHHHhhC
Q 037274          156 DIWLIGITALQFPCG  170 (245)
Q Consensus       156 DvwslG~~l~~~~~g  170 (245)
                      |.|.|||++++++.|
T Consensus       185 D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  185 DSWGLGCLIEELFNG  199 (690)
T ss_pred             hhhhHHHHHHHHhCc
Confidence            999999999999988

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.29  E-value=1.1e-11  Score=91.96  Aligned_cols=84  Identities=8%  Similarity=0.004  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|++++..+.|+++.....+....+..+++||+++|++|.+++...                 . .      .++
T Consensus        41 ~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~-----------------~-~------~~~   96 (199)
T TIGR03724        41 RERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEG-----------------N-D------ELL   96 (199)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhc-----------------H-H------HHH
Confidence            466889999999999887655454555666789999999999996655310                 0 0      678


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceecc
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHN  118 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~  118 (245)
                      .+++.+|.++|+.|++|+|++|.||+++
T Consensus        97 ~~i~~~l~~lH~~gi~H~Dl~~~Nil~~  124 (199)
T TIGR03724        97 REIGRLVGKLHKAGIVHGDLTTSNIIVR  124 (199)
T ss_pred             HHHHHHHHHHHHCCeecCCCCcceEEEE
Confidence            9999999999999999999999999986

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.29  E-value=2e-11  Score=92.92  Aligned_cols=88  Identities=10%  Similarity=0.077  Sum_probs=66.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCe--eeEEEEEEeC-c---eeEEEeeeccc-CCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274           10 EYAKLAREIYRYKHLSHPNI--IPIYKTMISQ-R---QLFYAEIACMI-GSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~I--v~~~~~~~~~-~---~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ....+.+|++++.+|.|++|  ++.+++...+ +   ..++|+|++++ .+|.+++..                  ..++
T Consensus        83 ~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~------------------~~l~  144 (239)
T PRK01723         83 ERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE------------------APLS  144 (239)
T ss_pred             hhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc------------------CCCC
Confidence            44678899999999998775  5666654332 2   23599999997 688666542                  2233


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      ..    .+.+++.++.+||++||+|+||||.|||++.
T Consensus       145 ~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~  177 (239)
T PRK01723        145 EE----QWQAIGQLIARFHDAGVYHADLNAHNILLDP  177 (239)
T ss_pred             HH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcC
Confidence            33    2578999999999999999999999999875

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.28  E-value=8.4e-12  Score=102.32  Aligned_cols=194  Identities=18%  Similarity=0.136  Sum_probs=141.0

Q ss_pred             HHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           13 KLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        13 ~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      .-.+|+...++++ |+|.++.+..++..+..++-+|.+. .+|.++-.               . ....++...++....
T Consensus       163 ~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~---------------~-~~~~~p~~~l~~~~~  225 (524)
T KOG0601|consen  163 RKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYCH---------------T-PCNFLPDNLLWNSLR  225 (524)
T ss_pred             cccchhhcccccCccccccccCcccccCCcceeeecccc-chhHHhhh---------------c-ccccCCchhhhhHHh
Confidence            3445666666664 9999999999999999999999997 46643332               2 123477888888889


Q ss_pred             HHHH----HHHHHHhCCcccccCCCCceeccc---------ccCccccccCC---------CCccccccccCceecCCCC
Q 037274           92 ETLK----GLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWISS---------SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        92 qi~~----~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~  149 (245)
                      +...    |+.++|+.+++|.|+||.||+...         ||+........         ...+...|++||...   .
T Consensus       226 ~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~---~  302 (524)
T KOG0601|consen  226 DWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN---G  302 (524)
T ss_pred             hhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc---c
Confidence            9988    999999999999999999999765         55544443333         113467899999997   4


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCC--CchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRR--QDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      -++...|++++|.+..+..++..+....  +......               ............+.++...+..|++.+|
T Consensus       303 l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r---------------~~~ip~e~~~~~s~~l~~~~~~~~d~~~  367 (524)
T KOG0601|consen  303 LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR---------------QGYIPLEFCEGGSSSLRSVTSQMLDEDP  367 (524)
T ss_pred             ccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc---------------cccCchhhhcCcchhhhhHHHHhcCcch
Confidence            4789999999999999988876554432  1111110               0001111224556677779999999999


Q ss_pred             CCCccHHHHhhccc
Q 037274          228 AKRPAAEAQVLQEM  241 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~  241 (245)
                      ..|++.+.+..+++
T Consensus       368 ~~~~~~q~~~~l~~  381 (524)
T KOG0601|consen  368 RLRLTAQILTALNV  381 (524)
T ss_pred             hhhhHHHHHhcccc
Confidence            99999999988765

>smart00090 RIO RIO-like kinase

Probab=99.23  E-value=3e-11  Score=91.77  Aligned_cols=86  Identities=15%  Similarity=0.027  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHhhCCCCC--eeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPN--IIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~--Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+..|+++++++.+..  +.++++.    +..++|||++++++|.....                 ............+
T Consensus        95 ~~~~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~-----------------~~~~~~~~~~~~i  153 (237)
T smart00090       95 LWAEKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL-----------------KDVEPEEEEEFEL  153 (237)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc-----------------ccCCcchHHHHHH
Confidence            45678999999997532  3344432    23589999999988743221                 1223455567788


Q ss_pred             HHHHHHHHHHHHhCC-cccccCCCCceecc
Q 037274           90 HKETLKGLSYLQGEG-LFHKNISAGHILHN  118 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~-ivH~dlkp~nil~~  118 (245)
                      +.|++.++.+||+.| ++|+||||+||+++
T Consensus       154 ~~qi~~~l~~LH~~g~iiH~Dikp~NIli~  183 (237)
T smart00090      154 YDDILEEMRKLYKEGELVHGDLSEYNILVH  183 (237)
T ss_pred             HHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence            999999999999999 99999999999986

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.18  E-value=1.2e-11  Score=107.30  Aligned_cols=189  Identities=15%  Similarity=0.162  Sum_probs=133.6

Q ss_pred             CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCC
Q 037274           25 SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEG  104 (245)
Q Consensus        25 ~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~  104 (245)
                      .+|-+++....+......++++++..+++|...++..+                 ..+..-.......+..++.+||...
T Consensus       862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~-----------------~~saepaRs~i~~~vqs~e~L~s~~  924 (1205)
T KOG0606|consen  862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSG-----------------CLSAEPARSPILERVQSLESLHSSL  924 (1205)
T ss_pred             CCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCC-----------------CcccccccchhHHHHhhhhccccch
Confidence            34555554444445667899999999999977766432                 2333334445677888999999998


Q ss_pred             cccccCCCCceeccc--------ccCccccc-----------------------------------cCCCCccccccccC
Q 037274          105 LFHKNISAGHILHNI--------FNDDTRNW-----------------------------------ISSSSSITTWAAAP  141 (245)
Q Consensus       105 ivH~dlkp~nil~~~--------f~~~~~~~-----------------------------------~~~~~~~~~~y~aP  141 (245)
                      +.|+|++|.|.+...        ++......                                   ......+|+.|.+|
T Consensus       925 r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laP 1004 (1205)
T KOG0606|consen  925 RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAP 1004 (1205)
T ss_pred             hhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCC
Confidence            999999999999654        22100000                                   00023348999999


Q ss_pred             ceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHH
Q 037274          142 EVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       142 E~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  221 (245)
                      |...+  ......+|.|++|+.+++.++|.+||...........+....    . ..      ...+...+.+..+++..
T Consensus      1005 e~~lg--~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~----~-~~------p~g~~~~s~~aq~~~~~ 1071 (1205)
T KOG0606|consen 1005 EILLG--RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRD----I-PW------PEGPEEGSYEAQDLINR 1071 (1205)
T ss_pred             ccccc--ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCC----C-CC------CCCccccChhhhhhhhh
Confidence            99998  667889999999999999999999999866554443222111    1 11      11225677889999999


Q ss_pred             hcCCCCCCCccHH---HHhhccccc
Q 037274          222 CLAPDPAKRPAAE---AQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~---~~l~~~~f~  243 (245)
                      .+..+|.+|..+.   ++-.|++|+
T Consensus      1072 ll~~~~~qr~~a~~~~e~k~~~~~~ 1096 (1205)
T KOG0606|consen 1072 LLTEEPTQRLGAKGAAEVKGHPFFQ 1096 (1205)
T ss_pred             hhccCchhccCcccccccccCCccC
Confidence            9999999999887   788888885

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.15  E-value=5e-11  Score=84.19  Aligned_cols=85  Identities=16%  Similarity=0.069  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHhhCCC--CCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           11 YAKLAREIYRYKHLSH--PNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h--~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+|+..++.++|  .++.+++++...++..++++|+++++++..                        ++......
T Consensus        35 ~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~------------------------~~~~~~~~   90 (155)
T cd05120          35 GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDE------------------------VSEEEKED   90 (155)
T ss_pred             hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeeccc------------------------CCHHHHHH
Confidence            4678999999999976  588899888877788999999999877721                        14455566


Q ss_pred             HHHHHHHHHHHHHhC---CcccccCCCCceeccc
Q 037274           89 AHKETLKGLSYLQGE---GLFHKNISAGHILHNI  119 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~---~ivH~dlkp~nil~~~  119 (245)
                      ++.+++.+++.+|..   +++|+|++|.||+++.
T Consensus        91 ~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~  124 (155)
T cd05120          91 IAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD  124 (155)
T ss_pred             HHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC
Confidence            789999999999985   6999999999999875

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=2.3e-11  Score=101.48  Aligned_cols=142  Identities=16%  Similarity=0.104  Sum_probs=99.1

Q ss_pred             HHHHHHHHHHHHh-CCcccccCCCCceeccc------ccCccccccCC--------C-------CccccccccCceecCC
Q 037274           90 HKETLKGLSYLQG-EGLFHKNISAGHILHNI------FNDDTRNWISS--------S-------SSITTWAAAPEVVNFG  147 (245)
Q Consensus        90 ~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~------f~~~~~~~~~~--------~-------~~~~~~y~aPE~~~~~  147 (245)
                      +.+++.|+.|+|. .++||++|.|++|.++.      .|++.......        .       ......|.|||++.+ 
T Consensus       105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-  183 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-  183 (700)
T ss_pred             hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-
Confidence            4567799999997 58999999999999987      22221111111        0       011567899999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHh-hCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFP-CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ...+.++|++|+|+++|.+. .|+.-+...+....... .........         ...+..++.++++-+.+++..+
T Consensus       184 -~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~-~~~~~~~~~---------~~~s~~~p~el~~~l~k~l~~~  252 (700)
T KOG2137|consen  184 -TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF-SRNLLNAGA---------FGYSNNLPSELRESLKKLLNGD  252 (700)
T ss_pred             -ccccccccceeeeeEEEEEecCCcchhhccCCcchhhh-hhccccccc---------ccccccCcHHHHHHHHHHhcCC
Confidence             67889999999999999998 45555555433332222 111111000         1111678899999999999999


Q ss_pred             CCCCccHHHHhhccccc
Q 037274          227 PAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       227 p~~Rpt~~~~l~~~~f~  243 (245)
                      +..||++..+...+||.
T Consensus       253 ~~~rp~~~~l~~~~ff~  269 (700)
T KOG2137|consen  253 SAVRPTLDLLLSIPFFS  269 (700)
T ss_pred             cccCcchhhhhcccccC
Confidence            99999999999999884

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.08  E-value=5.3e-10  Score=82.90  Aligned_cols=81  Identities=14%  Similarity=0.013  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHhhCCCCC--eeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPN--IIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~--Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      .....|..++.++.|++  +.+.++    .+..+++|||+++++|..+..                       ......+
T Consensus        78 ~~~~~E~~~l~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-----------------------~~~~~~~  130 (198)
T cd05144          78 LAAQKEFAALKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV-----------------------LEDPEEV  130 (198)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCceee----cCCceEEEEEeCCcchhhccc-----------------------cccHHHH
Confidence            34778999999998774  444443    245689999999999844321                       0233567


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      +.+++.++.++|+.|++|+||+|+||+++.
T Consensus       131 ~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~  160 (198)
T cd05144         131 LDEILEEIVKAYKHGIIHGDLSEFNILVDD  160 (198)
T ss_pred             HHHHHHHHHHHHHCCCCcCCCCcccEEEcC
Confidence            789999999999999999999999999975

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.06  E-value=4.9e-09  Score=85.30  Aligned_cols=188  Identities=14%  Similarity=0.127  Sum_probs=127.0

Q ss_pred             HHHHHHHhhCCCCCeeeEEEEEEe----CceeEEEeeeccc-CCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           15 AREIYRYKHLSHPNIIPIYKTMIS----QRQLFYAEIACMI-GSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        15 ~~E~~~l~~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      -.-++..+++.|+|+|++.+.+.+    +..+++|++|.++ ++|.++.-..+...+.  -.......+...++..+|.+
T Consensus       321 t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~--~n~~~~~~~~~~~e~~lW~y  398 (655)
T KOG3741|consen  321 TSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKR--TNSFYPSQNLKAPEEVLWSY  398 (655)
T ss_pred             hHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccc--cccccccCCCCchHHHHHHH
Confidence            345788999999999999988863    4469999999985 5787755433322211  11122334567899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc------ccCccccccCCCCccccccccC-ceecCCCCCCCchhhHHHHHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI------FNDDTRNWISSSSSITTWAAAP-EVVNFGDDYYSCKSDIWLIGI  162 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------f~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~~~DvwslG~  162 (245)
                      +.|+..||.++|+.|+.-+-|.+.+|+++.      +|.+......         -.| +.+.     --.+-|.=.||.
T Consensus       399 ~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~---------~d~~~~le-----~~Qq~D~~~lG~  464 (655)
T KOG3741|consen  399 ISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ---------EDPTEPLE-----SQQQNDLRDLGL  464 (655)
T ss_pred             HHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeec---------CCCCcchh-----HHhhhhHHHHHH
Confidence            999999999999999999999999999875      1111111100         011 2222     235678889999


Q ss_pred             HHHHHhhCCCC-CCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          163 TALQFPCGGLP-VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       163 ~l~~~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      +++.+.||..- +........   ....+                 ...++.+++++|......++.+ -++.+++.+
T Consensus       465 ll~aLAt~~~ns~~~d~~~~s---~~~~I-----------------~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  465 LLLALATGTENSNRTDSTQSS---HLTRI-----------------TTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             HHHHHhhcccccccccchHHH---HHHHh-----------------hhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence            99999999643 222221111   01111                 1557889999999999988886 677777654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.92  E-value=5.3e-10  Score=91.92  Aligned_cols=193  Identities=18%  Similarity=0.115  Sum_probs=129.2

Q ss_pred             HHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHH
Q 037274           15 AREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKET   93 (245)
Q Consensus        15 ~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi   93 (245)
                      ..|+.+...+ .|.+++.++..|..-+..++-.|||.++++..-.                 .....+++...+.+..|+
T Consensus       313 l~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~-----------------~~~~~~d~~~~~~~~~q~  375 (524)
T KOG0601|consen  313 LGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRS-----------------VTSQMLDEDPRLRLTAQI  375 (524)
T ss_pred             hhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhh-----------------HHHHhcCcchhhhhHHHH
Confidence            4456555555 4888998888887777888999999998883322                 123457788889999999


Q ss_pred             HHHHHHHHhCCcccccCCCCceeccc---------ccCccccccCC-CCcccccccc-CceecCCCCCCCchhhHHHHHH
Q 037274           94 LKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWISS-SSSITTWAAA-PEVVNFGDDYYSCKSDIWLIGI  162 (245)
Q Consensus        94 ~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~-~~~~~~~y~a-PE~~~~~~~~~~~~~DvwslG~  162 (245)
                      +.++.++|+..++|+|++|+||++..         ++......... .....-++.| +|.+.. ...+..++|++|||.
T Consensus       376 ~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e-~~~~~~~~~~~sl~~  454 (524)
T KOG0601|consen  376 LTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLE-DYPHLSKADIFSLGL  454 (524)
T ss_pred             Hhccccccchhhhcccccccceeeccchhhhhccccccccccceecccccccccccccchhhcc-ccccccccccccccc
Confidence            99999999999999999999999887         22221111111 1111334442 444432 366789999999999


Q ss_pred             HHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       163 ~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      .+.+.+++...-...+..   .    .+..+...          .......++..+...++.+++..||.+.++..|+-|
T Consensus       455 ~~~e~~~~~~ls~~~~~~---~----~i~~~~~p----------~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  455 SVDEAITGSPLSESGVQS---L----TIRSGDTP----------NLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF  517 (524)
T ss_pred             cccccccCcccCcccccc---e----eeeccccc----------CCCchHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence            999988876532221110   0    01001000          012333778889999999999999999998887654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.86  E-value=5.5e-08  Score=77.66  Aligned_cols=157  Identities=11%  Similarity=0.059  Sum_probs=103.0

Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceecccccCccccccCC-----------CCccccccccCceecCC
Q 037274           79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISS-----------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~f~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~  147 (245)
                      ..+.|+.+...++.++.+.+-||..|.+-+|++++|+|+++-+........+           -..+.+.|++||...-+
T Consensus       112 P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~  191 (637)
T COG4248         112 PHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLP  191 (637)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccc
Confidence            4578999999999999999999999999999999999999844443333322           23347889999987621


Q ss_pred             ---CCCCCchhhHHHHHHHHHHHhhC-CCCCCCCC----chHHHH-HHHhcCCCCcc-CCCC-CCCCCCCCcccccHHHH
Q 037274          148 ---DDYYSCKSDIWLIGITALQFPCG-GLPVSRRQ----DLDIMT-KMLMKQPKSTS-LQVA-PNEDTTHGTRTLSKNFW  216 (245)
Q Consensus       148 ---~~~~~~~~DvwslG~~l~~~~~g-~~p~~~~~----~~~~~~-~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~  216 (245)
                         ...-+...|.|.||+++++++.| +.||.+-.    .....+ .+......... .... .+.....+..-+++.+.
T Consensus       192 sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vq  271 (637)
T COG4248         192 SFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQ  271 (637)
T ss_pred             cccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHH
Confidence               12346789999999999999886 88997511    111111 11111100000 0000 01111222256778899


Q ss_pred             HHHHHhcCCC--CCCCccHHH
Q 037274          217 NMVKICLAPD--PAKRPAAEA  235 (245)
Q Consensus       217 ~li~~~l~~~--p~~Rpt~~~  235 (245)
                      .+..+|+..-  +.-|||++.
T Consensus       272 AlF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         272 ALFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             HHHHHHhcccCCCCCCCCHHH
Confidence            9999998753  457998864

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.85  E-value=1.7e-08  Score=71.88  Aligned_cols=86  Identities=9%  Similarity=-0.004  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+...+|++++.++.--.|...+-+..+.+...++|||++|..|.+++...                        ...+
T Consensus        42 rr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~------------------------~~~~   97 (204)
T COG3642          42 RRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA------------------------RPDL   97 (204)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc------------------------chHH
Confidence            3456788999999886444443344455778889999999998887666521                        1345


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      +..+-.-+.-||.+||+|+||.++||+++.
T Consensus        98 ~r~vG~~vg~lH~~givHGDLTtsNiIl~~  127 (204)
T COG3642          98 LREVGRLVGKLHKAGIVHGDLTTSNIILSG  127 (204)
T ss_pred             HHHHHHHHHHHHhcCeecCCCccceEEEeC
Confidence            566667777899999999999999999876

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.80  E-value=3.4e-08  Score=70.23  Aligned_cols=95  Identities=9%  Similarity=-0.035  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeeccc-CCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI-GSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+...+|++.|.++.--.|.-..-++.+.+.-++.|||.+| .++.+++...               ............
T Consensus        53 tr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~---------------~~~~~~d~~~~~  117 (229)
T KOG3087|consen   53 TRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILST---------------MEDESEDEGLAE  117 (229)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHH---------------ccCcccchhHHH
Confidence            456788899999988644444334445666777899999987 3665555421               122233344467


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      .+++|-+.+.-||.++++|+||..+||++..
T Consensus       118 ~~~~iG~~igklH~ndiiHGDLTTSNill~~  148 (229)
T KOG3087|consen  118 LARRIGELIGKLHDNDIIHGDLTTSNILLRS  148 (229)
T ss_pred             HHHHHHHHHHHhhhCCeecccccccceEEec
Confidence            8889999999999999999999999999765

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.76  E-value=5.8e-08  Score=71.08  Aligned_cols=84  Identities=11%  Similarity=0.050  Sum_probs=59.8

Q ss_pred             HHHHHHHHhhCCC--CCeeeEEEEEEeCceeEEEeeecccCCHH-HHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           14 LAREIYRYKHLSH--PNIIPIYKTMISQRQLFYAEIACMIGSLD-SIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        14 ~~~E~~~l~~l~h--~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ..+|.+.|+++..  -++.+.+++    ..-++||||+.++.+. ..++                  ...++......+.
T Consensus        73 a~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk------------------d~~~~~~~~~~i~  130 (197)
T cd05146          73 AEKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK------------------DAKLNDEEMKNAY  130 (197)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh------------------ccccCHHHHHHHH
Confidence            4589999999963  244455543    4568999999875441 0111                  1223445566778


Q ss_pred             HHHHHHHHHH-HhCCcccccCCCCceeccc
Q 037274           91 KETLKGLSYL-QGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        91 ~qi~~~l~~l-h~~~ivH~dlkp~nil~~~  119 (245)
                      .+++.+|..+ |..|+||+||++.||++..
T Consensus       131 ~~i~~~l~~l~H~~glVHGDLs~~NIL~~~  160 (197)
T cd05146         131 YQVLSMMKQLYKECNLVHADLSEYNMLWHD  160 (197)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEEC
Confidence            9999999988 8999999999999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.68  E-value=1.3e-07  Score=72.98  Aligned_cols=92  Identities=13%  Similarity=0.039  Sum_probs=66.3

Q ss_pred             HHHHHHHHHhhCCCCCe--eeEEEEEEe-----CceeEEEeeecccC-CHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274           13 KLAREIYRYKHLSHPNI--IPIYKTMIS-----QRQLFYAEIACMIG-SLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~I--v~~~~~~~~-----~~~~~lv~e~~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      .+.+|.+.+.+|..-+|  .+..++.+.     ....++|+|++++. +|.+++..              + .....+..
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~--------------~-~~~~~~~~  138 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCAD--------------W-ATNPPDPR  138 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHh--------------h-cccCCCHH
Confidence            47789998888853333  233444432     23478999999975 78776631              1 01234456


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      ....++.+++..+.-||+.|++|+|+++.|||++.
T Consensus       139 ~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~  173 (268)
T PRK15123        139 LKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHL  173 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEec
Confidence            67788999999999999999999999999999863

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.64  E-value=6.4e-08  Score=71.01  Aligned_cols=81  Identities=14%  Similarity=0.097  Sum_probs=56.0

Q ss_pred             HHHHHHHhhCCCCC--eeeEEEEEEeCceeEEEeeecccCCHHH-HHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           15 AREIYRYKHLSHPN--IIPIYKTMISQRQLFYAEIACMIGSLDS-IMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        15 ~~E~~~l~~l~h~~--Iv~~~~~~~~~~~~~lv~e~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      ..|.+.+.++.+..  +.+.++.    ...++++||++++++.. .+.           ..       .. ......++.
T Consensus        65 ~~e~~~l~~l~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~-----------~~-------~~-~~~~~~~~~  121 (187)
T cd05119          65 EKEFRNLKRLYEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLK-----------DV-------RL-LEDPEELYD  121 (187)
T ss_pred             HHHHHHHHHHHHcCCCCCceEec----CCCEEEEEEeCCCCccChhhh-----------hh-------hh-cccHHHHHH
Confidence            45666666665432  4444443    24699999999855411 010           00       00 156678899


Q ss_pred             HHHHHHHHHHh-CCcccccCCCCceecc
Q 037274           92 ETLKGLSYLQG-EGLFHKNISAGHILHN  118 (245)
Q Consensus        92 qi~~~l~~lh~-~~ivH~dlkp~nil~~  118 (245)
                      +++.++.++|. .|++|+||+|+||+++
T Consensus       122 ~~~~~l~~lh~~~~ivH~Dl~p~Nili~  149 (187)
T cd05119         122 QILELMRKLYREAGLVHGDLSEYNILVD  149 (187)
T ss_pred             HHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence            99999999999 9999999999999987

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.59  E-value=7.7e-08  Score=69.39  Aligned_cols=80  Identities=15%  Similarity=0.033  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHhhCCCCCee-eEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNII-PIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv-~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ..+..|+.+++.+.+.+++ ++++..  ....++|||+++|.++.+.                      ..   ......
T Consensus        37 ~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~~----------------------~~---~~~~~~   89 (170)
T cd05151          37 INRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLTE----------------------DF---SDPENL   89 (170)
T ss_pred             cCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccccc----------------------cc---cCHHHH
Confidence            4578899999998765554 444433  3345899999999887321                      00   112346


Q ss_pred             HHHHHHHHHHHhCCc-----ccccCCCCceecc
Q 037274           91 KETLKGLSYLQGEGL-----FHKNISAGHILHN  118 (245)
Q Consensus        91 ~qi~~~l~~lh~~~i-----vH~dlkp~nil~~  118 (245)
                      .+++.+|+.||+.++     +|+|++|.||+++
T Consensus        90 ~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~  122 (170)
T cd05151          90 EKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD  122 (170)
T ss_pred             HHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE
Confidence            789999999999885     9999999999986

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.50  E-value=1e-06  Score=65.68  Aligned_cols=94  Identities=11%  Similarity=0.078  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHhhCCCCC--eeeEEEEEEeC----ceeEEEeeecccC-CHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           11 YAKLAREIYRYKHLSHPN--IIPIYKTMISQ----RQLFYAEIACMIG-SLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~--Iv~~~~~~~~~----~~~~lv~e~~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      .....+|.+.+..|..-.  +.+.+++.+..    ...++|+|.+++. +|.+++...                 ...+.
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~-----------------~~~~~  117 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW-----------------EQLDP  117 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh-----------------cccch
Confidence            345778888777775332  33445554442    2358999999874 787766521                 11445


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccccc
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN  121 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~f~  121 (245)
                      .....++.+++..++-||++|++|+|+++.|||+..-+
T Consensus       118 ~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen  118 SQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDD  155 (206)
T ss_pred             hhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCC
Confidence            56677889999999999999999999999999987533

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.46  E-value=1.1e-06  Score=64.15  Aligned_cols=89  Identities=15%  Similarity=0.050  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCC--CeeeEEEEEEeCceeEEEeeecc--cCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            8 AEEYAKLAREIYRYKHLSHP--NIIPIYKTMISQRQLFYAEIACM--IGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~--~Iv~~~~~~~~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      .-......+|.+.|.++..-  ++.+.+++  .  .-.+||||++  |..+..+..                   ..++.
T Consensus        49 ~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~--~--~~~ivME~I~~~G~~~~~l~~-------------------~~~~~  105 (188)
T PF01163_consen   49 YLIREWAKKEFRNLKRLYEAGVPVPKPYDY--N--RNVIVMEYIGEDGVPLPRLKD-------------------VDLSP  105 (188)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTT-SS--EEEE--E--TTEEEEE--EETTEEGGCHHH-------------------CGGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCcEEEE--e--CCEEEEEecCCCccchhhHHh-------------------ccccc
Confidence            34566788999999999865  44555544  2  3479999999  655533222                   11123


Q ss_pred             HHHHHHHHHHHHHHHH-HHhCCcccccCCCCceeccc
Q 037274           84 DCLAIAHKETLKGLSY-LQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~-lh~~~ivH~dlkp~nil~~~  119 (245)
                      .....++.+++..+.. +|..|++|+||++.||+++.
T Consensus       106 ~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~  142 (188)
T PF01163_consen  106 EEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDD  142 (188)
T ss_dssp             STHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEET
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeec
Confidence            4455667777775554 67999999999999999875

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.37  E-value=1.2e-06  Score=72.59  Aligned_cols=88  Identities=15%  Similarity=0.113  Sum_probs=55.7

Q ss_pred             HHHHHHHHHhhCC----CCCeeeEEEEE-EeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274           13 KLAREIYRYKHLS----HPNIIPIYKTM-ISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus        13 ~~~~E~~~l~~l~----h~~Iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ++.+|++.+.++.    |.+-+.+...+ ......++||||++|++|.++....                ....+   ..
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~----------------~~~~~---~~  259 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD----------------EAGLD---RK  259 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH----------------hcCCC---HH
Confidence            4667777776663    33223332222 2244579999999999996654310                01111   22


Q ss_pred             HHHHHHHH-HHHHHHhCCcccccCCCCceeccc
Q 037274           88 IAHKETLK-GLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        88 ~~~~qi~~-~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      .++.+++. .+..+|..|++|+|++|.||++..
T Consensus       260 ~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~  292 (437)
T TIGR01982       260 ALAENLARSFLNQVLRDGFFHADLHPGNIFVLK  292 (437)
T ss_pred             HHHHHHHHHHHHHHHhCCceeCCCCcccEEECC
Confidence            34455554 467889999999999999999965

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.32  E-value=7.7e-06  Score=73.17  Aligned_cols=197  Identities=19%  Similarity=0.219  Sum_probs=121.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ..+......-|...+.+..|+|++.++++-...-    ...+..+++..-++.+.++                 ....++
T Consensus       222 ~k~~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q-----------------~v~~i~  284 (1351)
T KOG1035|consen  222 GKKEIQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ-----------------SVGSIP  284 (1351)
T ss_pred             hHHHHHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh-----------------hccccC
Confidence            3345555666788888999999999988864332    1233445555555533332                 135677


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCcee---ccc----------ccCccccccCC---CCccccccccCceecC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL---HNI----------FNDDTRNWISS---SSSITTWAAAPEVVNF  146 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil---~~~----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~  146 (245)
                      ....+.+..+..+|+.++|+....|.-+..+...   .+.          ++.........   ....+..+.++|....
T Consensus       285 ~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~  364 (1351)
T KOG1035|consen  285 LETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKE  364 (1351)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCcccccccccccc
Confidence            8888889999999999999997766665544222   111          11111111111   1111455667777665


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                      .........|+|.+|.....+..|..+-..   .........                    ........+...+|+.-+
T Consensus       365 ~~~~~~r~~dL~~lgll~~~~~~~~~i~~~---~~~~~~~l~--------------------~~~~~~~~d~~~~~~~~~  421 (1351)
T KOG1035|consen  365 NTAKKSRLTDLWCLGLLLLQLSQGEDISEK---SAVPVSLLD--------------------VLSTSELLDALPKCLDED  421 (1351)
T ss_pred             ccchhhhhhHHHHHHHHHhhhhhcCccccc---ccchhhhhc--------------------cccchhhhhhhhhhcchh
Confidence            222233447999999999988876543211   001100000                    011116788999999999


Q ss_pred             CCCCccHHHHhhccccc
Q 037274          227 PAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       227 p~~Rpt~~~~l~~~~f~  243 (245)
                      +++|+++.+++.|++-+
T Consensus       422 ~~~Rl~~~~ll~~~f~~  438 (1351)
T KOG1035|consen  422 SEERLSALELLTHPFLR  438 (1351)
T ss_pred             hhhccchhhhhhchhcc
Confidence            99999999999998854

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.10  E-value=6.2e-06  Score=62.05  Aligned_cols=49  Identities=14%  Similarity=0.070  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHHHhhCCCC--CeeeEEEEEEeC---ceeEEEeeecccCCHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHP--NIIPIYKTMISQ---RQLFYAEIACMIGSLDSIM   58 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~--~Iv~~~~~~~~~---~~~~lv~e~~~~~~L~~~~   58 (245)
                      ....+.+|+.+++.+.+.  ++.+++.+....   +..++++|+++|.++.+.+
T Consensus        38 ~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~   91 (223)
T cd05154          38 SAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRL   91 (223)
T ss_pred             ccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCC
Confidence            356789999999999763  356667665443   3568999999998885543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.06  E-value=3.4e-05  Score=57.22  Aligned_cols=57  Identities=14%  Similarity=0.130  Sum_probs=43.1

Q ss_pred             ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           40 RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        40 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      ...++++||++|..|.++.+                     +++    .+...+++++.-+|+.|++|+|.+|.|++++.
T Consensus       116 ~~~~ll~EYIeG~~l~d~~~---------------------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~  170 (229)
T PF06176_consen  116 SSYVLLMEYIEGVELNDIED---------------------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN  170 (229)
T ss_pred             eEEEEEEEEecCeecccchh---------------------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC
Confidence            34679999999988843221                     222    23456778899999999999999999999876


Q ss_pred             cc
Q 037274          120 FN  121 (245)
Q Consensus       120 f~  121 (245)
                      -+
T Consensus       171 ~~  172 (229)
T PF06176_consen  171 NG  172 (229)
T ss_pred             Cc
Confidence            44

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK09902 hypothetical protein; Provisional

Probab=97.94  E-value=5.6e-05  Score=55.84  Aligned_cols=94  Identities=11%  Similarity=-0.016  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHhhCCCCC--eeeEEEEEE---e--CceeEEEeeeccc-CCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274           10 EYAKLAREIYRYKHLSHPN--IIPIYKTMI---S--QRQLFYAEIACMI-GSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~--Iv~~~~~~~---~--~~~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ....|.+|...+.+|..-+  +.+.. ++.   .  .-..++|+|-+++ .+|.+++...               .-.+.
T Consensus        62 g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~---------------~~~~~  125 (216)
T PRK09902         62 GRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTEDMAGFISIADWYAQH---------------AVSPY  125 (216)
T ss_pred             CchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEEeCCCCccHHHHHhcC---------------CcCCc
Confidence            4567899999999885322  33333 221   1  1247899997763 4786655421               11234


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      +......++.+++..++-||+.|+.|+|+.+.||+++.
T Consensus       126 ~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~  163 (216)
T PRK09902        126 SDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKT  163 (216)
T ss_pred             chHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecC
Confidence            56666788999999999999999999999999999863

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.91  E-value=4.8e-06  Score=70.29  Aligned_cols=89  Identities=11%  Similarity=0.178  Sum_probs=52.4

Q ss_pred             HHHHHHHHHhhCC----CCCeeeEEEEEE-eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274           13 KLAREIYRYKHLS----HPNIIPIYKTMI-SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus        13 ~~~~E~~~l~~l~----h~~Iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ++.+|+..+.++.    +.+.+.+...+. .....++||||++|+.+.++-.-..           .......+....+.
T Consensus       202 D~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~-----------~g~d~~~la~~~v~  270 (537)
T PRK04750        202 DLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA-----------AGTDMKLLAERGVE  270 (537)
T ss_pred             CHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh-----------cCCCHHHHHHHHHH
Confidence            3555665555552    444444433332 2456799999999999966321000           00001124444455


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      .++.|+.       ..|++|+|++|.||+++.
T Consensus       271 ~~~~Qif-------~~GffHaDpHPGNIlv~~  295 (537)
T PRK04750        271 VFFTQVF-------RDGFFHADMHPGNIFVSY  295 (537)
T ss_pred             HHHHHHH-------hCCeeeCCCChHHeEEec
Confidence            5555655       489999999999999975

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.80  E-value=1.2e-05  Score=67.79  Aligned_cols=197  Identities=17%  Similarity=0.143  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHhhCCCCC-eeeEEEEEEeCceeEEEeeecccC-CHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPN-IIPIYKTMISQRQLFYAEIACMIG-SLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~-Iv~~~~~~~~~~~~~lv~e~~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....-++++|.+++||| .+..++.+.-+...++.++++.++ +....+.                .....+..-+...+
T Consensus       278 l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~----------------~se~~~~~~~~~~~  341 (829)
T KOG0576|consen  278 LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMT----------------VSEIALEQYQFAYP  341 (829)
T ss_pred             hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccCC----------------hhhHhhhhhhhhhh
Confidence            44566889999999999 666666666677789999999876 2211110                00112333345556


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc-------ccCccccc---cCCCCccccccccCceecCCCCCCCchhhHHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI-------FNDDTRNW---ISSSSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------f~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      ++.-.++++++|+.--+|+|    ||+.+.       ++......   ...+..+++.++|||....  ..+..+.|+|+
T Consensus       342 ~r~et~~l~~l~~~~~~~~d----~~l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~--~~~~~~p~~~~  415 (829)
T KOG0576|consen  342 LRKETRPLAELHSSYKVHRD----NILGSEEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQE--NTIDGCPDSGS  415 (829)
T ss_pred             hhhhcccccccccccccCcc----cccccccccccccccCCcccCcccccccCCCCCCCCCchhhcc--cccccCCCccC
Confidence            77778899999998778998    665543       33322221   1234556899999998887  66889999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHH-HHHHHHHhcCCCCCCCccHHHHhh
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKN-FWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      +|.-..++.-|-+|-.....     .........     ..+.....  ...++- -+++...|+...|..|+.....+.
T Consensus       416 ~~~~~~~~ap~~pPr~~P~~-----~~~~~g~~p-----~s~~L~~~--~aw~~~~~~~~~~~~~~g~P~~pkv~mgacf  483 (829)
T KOG0576|consen  416 LAVSAIQMAPGLPPRSSPPA-----VLPMIGNGP-----NSPMLTDK--SAWSPVFHRDFPAPCLNGLPPTPKVHMGACF  483 (829)
T ss_pred             CCcchhhcCCCCCCCCCCcc-----ccCCCCCCC-----Cccccchh--hhcCcccccCCcccccCCCCCCCcchhhHHH
Confidence            99887788777766443000     000000000     00000000  111111 124667788888888888777777


Q ss_pred             cccc
Q 037274          239 QEMW  242 (245)
Q Consensus       239 ~~~f  242 (245)
                      |-+|
T Consensus       484 sKvf  487 (829)
T KOG0576|consen  484 SKVF  487 (829)
T ss_pred             HHHh
Confidence            6655

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.61  E-value=0.00061  Score=50.27  Aligned_cols=88  Identities=20%  Similarity=0.207  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHhhCC------CCCeeeEEEEEEeCceeEEEeeeccc--C----CHHHHHhcCCCCChhhHHHHhhhcc
Q 037274           10 EYAKLAREIYRYKHLS------HPNIIPIYKTMISQRQLFYAEIACMI--G----SLDSIMTYRPLNSPAATQLIMSNRH   77 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~------h~~Iv~~~~~~~~~~~~~lv~e~~~~--~----~L~~~~~~~~~~~~~~~~~~~~~~~   77 (245)
                      ..++..+|+..+..+.      +.+|.++||+.+++...-+|+|.+..  |    ||.+++.                  
T Consensus        54 ~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~------------------  115 (199)
T PF10707_consen   54 RYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLK------------------  115 (199)
T ss_pred             hhHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHH------------------
Confidence            5677888888877776      88999999999999888999998753  2    4444442                  


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           78 RYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      ...++. .+..   .+-+-..+|-+++|+.+|++|.||++..
T Consensus       116 ~~~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~  153 (199)
T PF10707_consen  116 EGGLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQR  153 (199)
T ss_pred             cCCccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEe
Confidence            233444 3333   3334455788899999999999999865

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.57  E-value=0.00021  Score=54.52  Aligned_cols=86  Identities=13%  Similarity=-0.024  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHhhCCCC--CeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHP--NIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~--~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      -.....++|.+.|.+|...  .+.+.++    .+.-.+|||+++|-.|..                      .+++....
T Consensus       151 ~sRl~A~rEf~~L~~L~~~G~~VP~P~~----~nRHaVvMe~ieG~eL~~----------------------~r~~~en~  204 (304)
T COG0478         151 VSRLAAEREFEALQRLYPEGVKVPKPIA----WNRHAVVMEYIEGVELYR----------------------LRLDVENP  204 (304)
T ss_pred             hHHHHHHHHHHHHHHhhhcCCCCCCccc----cccceeeeehcccceeec----------------------ccCcccCH
Confidence            3556788999999999755  5666554    345689999999877721                      11123334


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceecccc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF  120 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~f  120 (245)
                      ..++..|+.-+.-.-..|+||+|+++-||+++.-
T Consensus       205 ~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~d  238 (304)
T COG0478         205 DEILDKILEEVRKAYRRGIVHGDLSEFNILVTED  238 (304)
T ss_pred             HHHHHHHHHHHHHHHHcCccccCCchheEEEecC
Confidence            4455556666665567999999999999999863

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.31  E-value=0.00061  Score=56.71  Aligned_cols=171  Identities=16%  Similarity=0.162  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeC-ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQ-RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..++.-..+.++.+.|+|...+.+..... ....+|+|++.. ||++.+....                  ..       
T Consensus        26 s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~-Sled~~~~~~------------------l~-------   79 (725)
T KOG1093|consen   26 SIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTM-SLEDILKTGN------------------LK-------   79 (725)
T ss_pred             HHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhcc-chHHHHHhcc------------------cc-------
Confidence            34566778889999999999988876443 347888888865 9977665321                  00       


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceecccccCccccccCCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC  169 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~  169 (245)
                         ..+++    .+|+.|-++-    ..++              .-+.|- |       ....+++||||+|.++.++..
T Consensus        80 ---~~s~~----~~~~~~~~~~----~~td--------------~~~t~~-~-------~~~~pKsdVwsl~~i~~el~L  126 (725)
T KOG1093|consen   80 ---DESLL----AHGVLHLNII----YITD--------------HFLTKY-P-------SPIGPKSDVWSLGFIILELYL  126 (725)
T ss_pred             ---hhhhc----ccccceehhh----hccc--------------cccccC-C-------CCCCcchhhhhHHHHHHHHHH
Confidence               00000    1222222211    1110              000000 1       112359999999999999998


Q ss_pred             CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          170 GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       170 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      |...+......+....+......... ...... .......+++.+..+..+|+...|..||...+..+++-|
T Consensus       127 ~~~l~~~~~~s~~l~~i~k~~~~d~~-~~~~a~-e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~  197 (725)
T KOG1093|consen  127 GISLEAELTESEYLEILLKYYTDDQE-LLSTAM-EHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSF  197 (725)
T ss_pred             hhHHHHHHHHHHHHHHHHHhccCchh-HHHHHH-HHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccH
Confidence            87766543332222222111100000 000000 000113355677889999999999999988888877654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.14  E-value=0.0027  Score=48.07  Aligned_cols=44  Identities=7%  Similarity=-0.075  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHhhCCCCC--eeeEEEEEEeCceeEEEeeecccCC
Q 037274           10 EYAKLAREIYRYKHLSHPN--IIPIYKTMISQRQLFYAEIACMIGS   53 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~--Iv~~~~~~~~~~~~~lv~e~~~~~~   53 (245)
                      ....+.+|.++++.+..-.  +.+.+++....+...++|++++|.+
T Consensus        35 ~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172        35 DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            3456789999999886433  3566777767777889999999863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.05  E-value=0.0021  Score=49.23  Aligned_cols=47  Identities=13%  Similarity=0.051  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHH
Q 037274           11 YAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSI   57 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~   57 (245)
                      ...+.+|+++++.+. +--+.+++++...++..++||++++|.++...
T Consensus        35 ~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150          35 TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            446788999998885 33345667776666678999999999887643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.91  E-value=0.0031  Score=46.23  Aligned_cols=87  Identities=16%  Similarity=0.010  Sum_probs=65.3

Q ss_pred             HHHHHHHhhCCC-CCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHH
Q 037274           15 AREIYRYKHLSH-PNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKET   93 (245)
Q Consensus        15 ~~E~~~l~~l~h-~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi   93 (245)
                      ..|.-+++.+++ +++.+++|+|.    .++++|+...+++.....              ....-..-+|.....++.++
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~--------------~l~~~~~~~w~~R~~iA~~l   68 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYR--------------PLSQFLQSPWEQRAKIALQL   68 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCcccccccc--------------ccccccccCHHHHHHHHHHH
Confidence            458888888876 69999999983    367899998766521100              00011346789999999999


Q ss_pred             HHHHHHHHh---CCcccccCCCCceeccc
Q 037274           94 LKGLSYLQG---EGLFHKNISAGHILHNI  119 (245)
Q Consensus        94 ~~~l~~lh~---~~ivH~dlkp~nil~~~  119 (245)
                      ++.+.+++.   ..+.-.|++++|+-++.
T Consensus        69 L~~l~~l~~~~~~~~~lcDv~~~nfgv~~   97 (188)
T PF12260_consen   69 LELLEELDHGPLGFFYLCDVSPDNFGVND   97 (188)
T ss_pred             HHHHHHHhcCCCCcEEEeecchHHeEEeC
Confidence            999999998   35777899999999876

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.82  E-value=0.0049  Score=46.95  Aligned_cols=54  Identities=6%  Similarity=-0.160  Sum_probs=33.2

Q ss_pred             cccccHHHHHHHHHHHHHHhhCCCC---CeeeEEEEEEeC---ceeEEEeeecccCCHHH
Q 037274            3 DINHQAEEYAKLAREIYRYKHLSHP---NIIPIYKTMISQ---RQLFYAEIACMIGSLDS   56 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~h~---~Iv~~~~~~~~~---~~~~lv~e~~~~~~L~~   56 (245)
                      ++.+.......+.+|.+++..|...   -+.++++.....   +..+++|++++|.++.+
T Consensus        24 R~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~~l~~   83 (235)
T cd05155          24 RLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGETATA   83 (235)
T ss_pred             EcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCCCCCc
Confidence            3433434556899999999988632   233334332221   23588999999977743

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.22  E-value=0.017  Score=49.06  Aligned_cols=92  Identities=18%  Similarity=0.138  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHhhCC-----CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274           10 EYAKLAREIYRYKHLS-----HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~-----h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..-++.+|+..+.++.     .+++.-..=+++-.+.-.++|||++|..+++...             ..   ....+.+
T Consensus       204 ~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~-------------l~---~~g~d~k  267 (517)
T COG0661         204 EELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAA-------------LK---SAGIDRK  267 (517)
T ss_pred             HHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHH-------------HH---hcCCCHH
Confidence            3445667777776662     4554332333444567799999999988866532             11   1223333


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      .+...+.++.  +..+-..|+.|.|.+|.||++..
T Consensus       268 ~ia~~~~~~f--~~q~~~dgffHaDpHpGNi~v~~  300 (517)
T COG0661         268 ELAELLVRAF--LRQLLRDGFFHADPHPGNILVRS  300 (517)
T ss_pred             HHHHHHHHHH--HHHHHhcCccccCCCccceEEec
Confidence            3333222222  22333379999999999999986

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.73  E-value=0.049  Score=41.45  Aligned_cols=85  Identities=13%  Similarity=0.034  Sum_probs=55.8

Q ss_pred             HHHHHHHHhhCCCC--CeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           14 LAREIYRYKHLSHP--NIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        14 ~~~E~~~l~~l~h~--~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      ..+|...|+++..-  .+.+.+++.    .-.++||++.....     ..|            ..........+...+..
T Consensus       115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~-----pAP------------~LkDv~~e~~e~~~~~~  173 (268)
T COG1718         115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGL-----PAP------------RLKDVPLELEEAEGLYE  173 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCC-----CCC------------CcccCCcCchhHHHHHH
Confidence            56788888888533  333445443    23799999975422     000            00122333335667778


Q ss_pred             HHHHHHHHHHh-CCcccccCCCCceeccc
Q 037274           92 ETLKGLSYLQG-EGLFHKNISAGHILHNI  119 (245)
Q Consensus        92 qi~~~l~~lh~-~~ivH~dlkp~nil~~~  119 (245)
                      ++++.+.-|-. .|+||+||+.-|||+..
T Consensus       174 ~~v~~~~~l~~~a~LVHgDLSEyNiL~~~  202 (268)
T COG1718         174 DVVEYMRRLYKEAGLVHGDLSEYNILVHD  202 (268)
T ss_pred             HHHHHHHHHHHhcCcccccchhhheEEEC
Confidence            88888888877 89999999999999864

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.54  E-value=0.05  Score=46.29  Aligned_cols=71  Identities=14%  Similarity=0.134  Sum_probs=43.7

Q ss_pred             eeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccc
Q 037274           29 IIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHK  108 (245)
Q Consensus        29 Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~  108 (245)
                      |.++|..  ......++|||++|..+.|+-             .+.   +..++...+..-+.+...-  -+-..|++|.
T Consensus       266 VP~Vy~~--~st~RVLtME~~~G~~i~Dl~-------------~i~---~~gi~~~~i~~~l~~~~~~--qIf~~GffHa  325 (538)
T KOG1235|consen  266 VPKVYWD--LSTKRVLTMEYVDGIKINDLD-------------AID---KRGISPHDILNKLVEAYLE--QIFKTGFFHA  325 (538)
T ss_pred             CCeehhh--cCcceEEEEEecCCccCCCHH-------------HHH---HcCCCHHHHHHHHHHHHHH--HHHhcCCccC
Confidence            4444433  344679999999998886642             122   2334544444433333322  2333689999


Q ss_pred             cCCCCceeccc
Q 037274          109 NISAGHILHNI  119 (245)
Q Consensus       109 dlkp~nil~~~  119 (245)
                      |=+|.||++..
T Consensus       326 DPHPGNilv~~  336 (538)
T KOG1235|consen  326 DPHPGNILVRP  336 (538)
T ss_pred             CCCCCcEEEec
Confidence            99999999983

>PLN02876 acyl-CoA dehydrogenase

Probab=94.78  E-value=0.15  Score=46.49  Aligned_cols=44  Identities=16%  Similarity=0.142  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHhhCC-CCCe--eeEEEEEEeC---ceeEEEeeecccCCH
Q 037274           11 YAKLAREIYRYKHLS-HPNI--IPIYKTMISQ---RQLFYAEIACMIGSL   54 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~-h~~I--v~~~~~~~~~---~~~~lv~e~~~~~~L   54 (245)
                      ...+.+|+++++.|. |.++  .++++++.+.   +..++|||+++|..+
T Consensus        82 ~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~  131 (822)
T PLN02876         82 AHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF  131 (822)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence            457889999999996 6665  6777776554   467899999998554

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=94.61  E-value=0.17  Score=40.27  Aligned_cols=48  Identities=13%  Similarity=-0.061  Sum_probs=32.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCC--CCeeeEEEEEEeCc--eeEEEeeecccCCH
Q 037274            7 QAEEYAKLAREIYRYKHLSH--PNIIPIYKTMISQR--QLFYAEIACMIGSL   54 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h--~~Iv~~~~~~~~~~--~~~lv~e~~~~~~L   54 (245)
                      ......+..+|..+++.+.-  --+...++.|..+.  ..+.||++++|..+
T Consensus        61 ~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~  112 (321)
T COG3173          61 PVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVV  112 (321)
T ss_pred             cchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceec
Confidence            34566777888888888753  22334466665554  67999999998444

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=94.43  E-value=0.015  Score=55.06  Aligned_cols=147  Identities=11%  Similarity=-0.049  Sum_probs=93.0

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      ...|.+-++...|+++...+.-...  ....+..++++.+|.+.+.+....             .....+....+.....
T Consensus      1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~-------------ee~~~ld~~~v~~~~k 1342 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGL-------------EESPDLDRSPVHLRHK 1342 (2724)
T ss_pred             hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhcc-------------ccCCcchhchHHHHHH
Confidence            4455556666789998887665432  345788899999999866554211             1122333333333333


Q ss_pred             HHHHHHHHHHhC-C----cccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCch
Q 037274           92 ETLKGLSYLQGE-G----LFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        92 qi~~~l~~lh~~-~----ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.+....-.|+. +    -+|+++|+-|.++..        +|+.+......    ...+++.|++|+..+.  ..++.+
T Consensus      1343 vsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~--ik~t~r 1420 (2724)
T KOG1826|consen 1343 VSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNE--IKFTKR 1420 (2724)
T ss_pred             HHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHH--HhhhhH
Confidence            434444444432 2    488999998887654        56665221111    3344778899998886  678888


Q ss_pred             hhHHHHHHHHHHHhhCCCCCC
Q 037274          155 SDIWLIGITALQFPCGGLPVS  175 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~  175 (245)
                      +|+|..|+.+|....|..+|-
T Consensus      1421 sdilr~s~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1421 SDILRRSLSLYLRSDGNAYFI 1441 (2724)
T ss_pred             HHHHHHHHHHHHHhcccHHHH
Confidence            999999999999877766553

>TIGR02721 ycfN_thiK thiamine kinase

Probab=94.11  E-value=0.16  Score=39.19  Aligned_cols=39  Identities=10%  Similarity=-0.112  Sum_probs=25.6

Q ss_pred             HHHHHHHHHhhCCCCCee-eEEEEEEeCceeEEEeeecccCCHH
Q 037274           13 KLAREIYRYKHLSHPNII-PIYKTMISQRQLFYAEIACMIGSLD   55 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~Iv-~~~~~~~~~~~~~lv~e~~~~~~L~   55 (245)
                      +..+|..+++.+....+. ++++..  +  -++|++|++|.++.
T Consensus        37 ~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~~   76 (256)
T TIGR02721        37 DRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVIT   76 (256)
T ss_pred             cHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCcccc
Confidence            357899999988643343 333332  2  36899999986653

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=93.89  E-value=0.56  Score=35.43  Aligned_cols=120  Identities=8%  Similarity=-0.002  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      .-+..+.+++.++.  .|+++..=  ....+-++.|.|-....                          .+.    .+..
T Consensus       103 ~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i--------------------------~~~----N~i~  148 (308)
T PF07387_consen  103 ALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI--------------------------NFS----NFIT  148 (308)
T ss_pred             hhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc--------------------------chh----HHHH
Confidence            34566677777654  46665411  22346788888864332                          001    1111


Q ss_pred             HHHHHHHHHHh--CCcccccCCCCceecccccCccccccCCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhh
Q 037274           92 ETLKGLSYLQG--EGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC  169 (245)
Q Consensus        92 qi~~~l~~lh~--~~ivH~dlkp~nil~~~f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~  169 (245)
                      --+++|.-.|+  .+.+|+|..|+||+-+.+|.-+......-...+.-|..-|+     ...+.++.+=+|=..++++..
T Consensus       149 agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~~~V~~vN~~Y-----~~lT~~aE~~~fv~s~l~~v~  223 (308)
T PF07387_consen  149 AGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLENQVNMVNIEY-----ESLTQEAEVKVFVKSCLKLVE  223 (308)
T ss_pred             HhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhhhhhheeeEEeeec-----cccChHHHHHHHHHHHHHHHH
Confidence            22456777884  46899999999999999998877766554444555555222     235777777777777777765


Q ss_pred             C
Q 037274          170 G  170 (245)
Q Consensus       170 g  170 (245)
                      .
T Consensus       224 ~  224 (308)
T PF07387_consen  224 K  224 (308)
T ss_pred             H
Confidence            3

The function of this family is unknown.

>PRK10593 hypothetical protein; Provisional

Probab=93.62  E-value=0.29  Score=38.76  Aligned_cols=72  Identities=11%  Similarity=0.035  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHHHhhCCC---CCeeeEEEEEEe---CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           10 EYAKLAREIYRYKHLSH---PNIIPIYKTMIS---QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h---~~Iv~~~~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ....+..|...|+.|.-   -.+.++++.+..   .+..++|||+++++++.+.                      ..+.
T Consensus        50 ~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~~~----------------------~~~~  107 (297)
T PRK10593         50 TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVEAP----------------------ARTP  107 (297)
T ss_pred             cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEecCCC----------------------CCCH
Confidence            34689999999999853   256677877654   3668999999999877320                      0112


Q ss_pred             HHHHHHHHHHHHHHHHHHhC
Q 037274           84 DCLAIAHKETLKGLSYLQGE  103 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~  103 (245)
                      .....+..+++++|+-||+.
T Consensus       108 ~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593        108 ERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             HHHHHHHHHHHHHHHHHhCC
Confidence            22334556677777777764

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=91.68  E-value=0.71  Score=36.17  Aligned_cols=23  Identities=13%  Similarity=0.066  Sum_probs=17.0

Q ss_pred             cccccHHHHHHHHHHHHHHhhCC
Q 037274            3 DINHQAEEYAKLAREIYRYKHLS   25 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~   25 (245)
                      +..+.......+.+|+++|+.|.
T Consensus        41 R~p~~~~~~~~l~rE~~vL~~L~   63 (276)
T cd05152          41 RIPRRPDVSERAAAEKRVLALVR   63 (276)
T ss_pred             EecCCHHHHHHHHHHHHHHHHHH
Confidence            33444556678899999999985

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PHA03111 Ser/Thr kinase; Provisional

Probab=87.57  E-value=0.82  Score=36.69  Aligned_cols=37  Identities=11%  Similarity=0.117  Sum_probs=26.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHh----CCcccccCCCCceeccc
Q 037274           83 VDCLAIAHKETLKGLSYLQG----EGLFHKNISAGHILHNI  119 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~----~~ivH~dlkp~nil~~~  119 (245)
                      .+-++.+..||+.-.-.+-.    ...+|-||||+|||+.+
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFd  318 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFD  318 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEec
Confidence            45677788888765433322    25899999999999855

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=87.37  E-value=2.4  Score=31.64  Aligned_cols=54  Identities=13%  Similarity=0.067  Sum_probs=36.0

Q ss_pred             cccccHHHHHHHHHHHHHHhhCCCCC--eeeEEEEEEe---CceeEEEeeecccCCHHH
Q 037274            3 DINHQAEEYAKLAREIYRYKHLSHPN--IIPIYKTMIS---QRQLFYAEIACMIGSLDS   56 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~h~~--Iv~~~~~~~~---~~~~~lv~e~~~~~~L~~   56 (245)
                      +..........+.+|..+++.|....  +.+++.....   ....+++++++++.++..
T Consensus        26 K~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~   84 (239)
T PF01636_consen   26 KFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD   84 (239)
T ss_dssp             EEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred             EEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence            44444467788999999999885332  4455654322   334799999999988866

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=87.04  E-value=2.2  Score=35.47  Aligned_cols=61  Identities=15%  Similarity=0.128  Sum_probs=37.9

Q ss_pred             eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHH-HHHhCCcccccCCCCceeccc
Q 037274           41 QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLS-YLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        41 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~-~lh~~~ivH~dlkp~nil~~~  119 (245)
                      ...++-+|..|.++..++..                  ...++.....++.=.+.|+- -+--.+++|.|++|.||++..
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~------------------~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf  380 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKW------------------KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF  380 (565)
T ss_pred             cceeeeeccccccHHhhhhc------------------ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence            45677778888888666653                  22333333344333344433 223357999999999999865

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=85.71  E-value=6.9  Score=29.14  Aligned_cols=77  Identities=8%  Similarity=0.071  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHhhCC---CCCe--eeEEEEEEeCc------------------eeEEEeeecccCCHHHHHhcCCCCCh
Q 037274           10 EYAKLAREIYRYKHLS---HPNI--IPIYKTMISQR------------------QLFYAEIACMIGSLDSIMTYRPLNSP   66 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~---h~~I--v~~~~~~~~~~------------------~~~lv~e~~~~~~L~~~~~~~~~~~~   66 (245)
                      ..+-|..|.+...+|+   +.++  |+.+||..-..                  ..-||-||++...             
T Consensus        97 y~~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------  163 (207)
T PF13095_consen   97 YADPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------  163 (207)
T ss_pred             hcChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------
Confidence            3446888999888885   4566  89999974321                  1234555443311             


Q ss_pred             hhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCcee
Q 037274           67 AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL  116 (245)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil  116 (245)
                                   .++..    -+.++..-+..+|..||+-+|+++.|..
T Consensus       164 -------------~~~~~----~~~~~~~dl~~~~k~gI~~~Dv~~~ny~  196 (207)
T PF13095_consen  164 -------------PLQIR----DIPQMLRDLKILHKLGIVPRDVKPRNYR  196 (207)
T ss_pred             -------------ccchh----HHHHHHHHHHHHHHCCeeeccCcccccc
Confidence                         12222    2356777788899999999999999976

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=84.24  E-value=2.5  Score=30.81  Aligned_cols=89  Identities=15%  Similarity=0.053  Sum_probs=57.0

Q ss_pred             ccccccHHHHHHHHHHHHHHhhCCCCCee-eEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            2 IDINHQAEEYAKLAREIYRYKHLSHPNII-PIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         2 ~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv-~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      +++...+.-...+..|+++|..++-.++. ++|.+-.    .++.|||..|-.|.+....                    
T Consensus        50 ~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~L~~~~~~--------------------  105 (201)
T COG2112          50 LKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRPLGKLEIG--------------------  105 (201)
T ss_pred             EEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcchhhhhhc--------------------
Confidence            45666777888999999999999876665 4454422    2455999998788443321                    


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCC--Cceecc
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISA--GHILHN  118 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp--~nil~~  118 (245)
                      .+.    .-...+++..--|-..||-|+.|+-  .||+++
T Consensus       106 ~~r----k~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~  141 (201)
T COG2112         106 GDR----KHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVN  141 (201)
T ss_pred             ccH----HHHHHHHHHHHHHHHhccchhhhcCCceeEEec
Confidence            011    1224455555556667999999874  355544

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=83.04  E-value=1.1  Score=36.17  Aligned_cols=37  Identities=11%  Similarity=0.083  Sum_probs=25.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHh----CCcccccCCCCceeccc
Q 037274           83 VDCLAIAHKETLKGLSYLQG----EGLFHKNISAGHILHNI  119 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~----~~ivH~dlkp~nil~~~  119 (245)
                      .+-++.+..||+.-.--+-.    ...+|-||||+|||+-+
T Consensus       274 ~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFd  314 (434)
T PF05445_consen  274 VEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFD  314 (434)
T ss_pred             HHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEec
Confidence            45667777887643321212    25899999999999865

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=82.24  E-value=1.8  Score=34.90  Aligned_cols=80  Identities=14%  Similarity=0.056  Sum_probs=52.6

Q ss_pred             HHHHHHHHHhhCC-CCCeee-EEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           13 KLAREIYRYKHLS-HPNIIP-IYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        13 ~~~~E~~~l~~l~-h~~Iv~-~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ...+|...|+.|. |..=|+ .+    +.+.-++|||++.+-.|..+-+                       ......+.
T Consensus       156 aa~kEfafmkaL~e~gfpVPkpi----D~~RH~Vvmelv~g~Pl~~v~~-----------------------v~d~~~ly  208 (465)
T KOG2268|consen  156 AATKEFAFMKALYERGFPVPKPI----DHNRHCVVMELVDGYPLRQVRH-----------------------VEDPPTLY  208 (465)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCcc----cccceeeHHHhhcccceeeeee-----------------------cCChHHHH
Confidence            4567888888885 443332 22    3456789999999877732111                       11122334


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      ..++.-+--|-.+|++|+|.+-=||++..
T Consensus       209 ~~lm~~Iv~la~~GlIHgDFNEFNimv~d  237 (465)
T KOG2268|consen  209 DDLMGLIVRLANHGLIHGDFNEFNIMVKD  237 (465)
T ss_pred             HHHHHHHHHHHHcCceecccchheeEEec
Confidence            45555566778899999999999999985

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=81.11  E-value=5.3  Score=32.93  Aligned_cols=87  Identities=10%  Similarity=0.027  Sum_probs=55.6

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKET   93 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi   93 (245)
                      ...|++-|++|+.-.|.-.--... . .-.|||+++.....-                 .-......++...+..+-.++
T Consensus       213 AEKE~RNLkRl~~aGIP~PePIlL-k-~hVLVM~FlGrdgw~-----------------aPkLKd~~ls~~ka~~~Y~~~  273 (520)
T KOG2270|consen  213 AEKEMRNLKRLNNAGIPCPEPILL-K-NHVLVMEFLGRDGWA-----------------APKLKDASLSTSKARELYQQC  273 (520)
T ss_pred             HHHHHHHHHHHHhcCCCCCCceee-e-cceEeeeeccCCCCc-----------------CcccccccCChHHHHHHHHHH
Confidence            456888888887555322111111 1 247899998643220                 001123456667777777888


Q ss_pred             HHHHHHHHh-CCcccccCCCCceeccc
Q 037274           94 LKGLSYLQG-EGLFHKNISAGHILHNI  119 (245)
Q Consensus        94 ~~~l~~lh~-~~ivH~dlkp~nil~~~  119 (245)
                      +.-+.-|.+ .++||.||+--|+|+..
T Consensus       274 v~~MR~lY~~c~LVHADLSEfN~Lyhd  300 (520)
T KOG2270|consen  274 VRIMRRLYQKCRLVHADLSEFNLLYHD  300 (520)
T ss_pred             HHHHHHHHHHhceeccchhhhhheEEC
Confidence            887776654 68999999999999765

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=80.95  E-value=2.4  Score=33.65  Aligned_cols=17  Identities=24%  Similarity=0.374  Sum_probs=14.8

Q ss_pred             CCcccccCCCCceeccc
Q 037274          103 EGLFHKNISAGHILHNI  119 (245)
Q Consensus       103 ~~ivH~dlkp~nil~~~  119 (245)
                      .+++|+|+.+.|++++.
T Consensus       187 ~~liHgD~~~~Nil~~~  203 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD  203 (313)
T ss_pred             CceEcCCCCcccEEEeC
Confidence            47899999999999764

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=80.52  E-value=9.2  Score=29.32  Aligned_cols=50  Identities=14%  Similarity=0.099  Sum_probs=39.3

Q ss_pred             cccHHHHHHHHHHHHHHhhCCC---CCeeeEEEEEEeCceeEEEeeecccCCH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSH---PNIIPIYKTMISQRQLFYAEIACMIGSL   54 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h---~~Iv~~~~~~~~~~~~~lv~e~~~~~~L   54 (245)
                      ....+....|..|+.-|+.|.-   -.+.+++..-.+.+..|+|++|.+.+.+
T Consensus        46 ~n~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          46 CNQREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             ecchhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            4456677889999998888853   3456777777778889999999998777

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	245
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-15
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-15
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		9e-08
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		7e-07
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		7e-07
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		7e-07
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		8e-07
3gni_B	389	Structure Of Strad And Mo25 Length = 389		5e-06
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		5e-06
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		6e-06
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-06
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		6e-06
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		7e-06
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		8e-06
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		9e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-05
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-05
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		4e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		5e-05
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		6e-05
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-04
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		3e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		3e-04
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		7e-04
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		7e-04
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		7e-04
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		7e-04
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		7e-04
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		8e-04
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		8e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		8e-04

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct: 59  ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108
Query: 73  MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
               H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL               
Sbjct: 109 AKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
Query: 119 ----IFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                  D TRN              PEV+     Y   K+DIW  GITA++   G  P 
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227
Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
            +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A
Sbjct: 228 HKYPPMKVLMLTLQNDPPSLETGVQDKE----MLKKYGKSFRKMISLCLQKDPEKRPTA 282

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           +L +EI       HPNI+  Y + + + +L+        GS+  I+ +          ++
Sbjct: 54  ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 103
Query: 73  MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
               H+ G+  +  +A   +E L+GL YL   G  H+++ AG+IL               
Sbjct: 104 AKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
Query: 119 ----IFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                  D TRN              PEV+     Y   K+DIW  GITA++   G  P 
Sbjct: 164 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 222
Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
            +   + ++   L   P S    V   E      +   K+F  M+ +CL  DP KRP A
Sbjct: 223 HKYPPMKVLMLTLQNDPPSLETGVQDKE----MLKKYGKSFRKMISLCLQKDPEKRPTA 277

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 92/240 (38%), Gaps = 44/240 (18%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           ++ +EI   +    P+++  Y +      L+     C  GS+  I+  R           
Sbjct: 70  EIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR----------- 118
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXX 132
                   +T D +A   + TLKGL YL      H++I AG+IL N              
Sbjct: 119 -----NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAG 173
Query: 133 XXXXXXX------------XPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
                               PEV+   +  Y+C +DIW +GITA++   G  P +   D+
Sbjct: 174 QLTDXMAKRNXVIGTPFWMAPEVIQ--EIGYNCVADIWSLGITAIEMAEGKPPYA---DI 228
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTL-SKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
             M  + M         +  N   T     L S NF + VK CL   P +R  A  Q+LQ
Sbjct: 229 HPMRAIFM---------IPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATA-TQLLQ 278

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 40/236 (16%)
Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR-PLNSPA 67
           E++  + +E+   + L HPN I      + +   +     C+  + D +  ++ PL    
Sbjct: 57  EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE-- 114
Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------I 119
                          V+  A+ H   L+GL+YL    + H+++ AG+IL +         
Sbjct: 115 ---------------VEIAAVTHG-ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGD 158
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDD-YYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
           F   +                PEV+   D+  Y  K D+W +GIT ++         R+ 
Sbjct: 159 FGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKP 212
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
            L  M  M      S    +A NE     +   S+ F N V  CL   P  RP +E
Sbjct: 213 PLFNMNAM------SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 262

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 29/162 (17%)
Query: 86  LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
           +A   +E LKGL YL  E   H++I A ++L +   D             DT+       
Sbjct: 118 IATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNXF 176
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
                   PEV+      Y  K+DIW +GITA++   G  P S   DL  M ++L   PK
Sbjct: 177 VGTPFWMAPEVIK--QSAYDFKADIWSLGITAIELAKGEPPNS---DLHPM-RVLFLIPK 230
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
           ++     P  +  H     SK F   V+ CL  DP  RP A+
Sbjct: 231 NS----PPTLEGQH-----SKPFKEFVEACLNKDPRFRPTAK 263

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 40/236 (16%)
Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR-PLNSPA 67
           E++  + +E+   + L HPN I      + +   +     C+  + D +  ++ PL    
Sbjct: 96  EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE-- 153
Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------I 119
                          V+  A+ H   L+GL+YL    + H+++ AG+IL +         
Sbjct: 154 ---------------VEIAAVTHG-ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGD 197
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDD-YYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
           F   +                PEV+   D+  Y  K D+W +GIT ++         R+ 
Sbjct: 198 FGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKP 251
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
            L  M  M      S    +A NE     +   S+ F N V  CL   P  RP +E
Sbjct: 252 PLFNMNAM------SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 301

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 86  LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
           +A   KE LKGL YL  E   H++I A ++L +   D             DT+       
Sbjct: 122 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNTF 180
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
                   PEV+      Y  K+DIW +GITA++   G  P S   D+  M ++L   PK
Sbjct: 181 VGTPFWMAPEVIQ--QSAYDSKADIWSLGITAIELAKGEPPNS---DMHPM-RVLFLIPK 234
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
           +       N  T  G  T  K+F   +  CL  DP+ RP A+
Sbjct: 235 N-------NPPTLVGDFT--KSFKEFIDACLNKDPSFRPTAK 267

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 107/277 (38%), Gaps = 78/277 (28%)
Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
           L  E++  K  +HPNI+P   T I+  +L+          + S M Y      +A  LI 
Sbjct: 73  LQGELHVSKLFNHPNIVPYRATFIADNELWV---------VTSFMAYG-----SAKDLIC 118
Query: 74  SNRHRYGITVDCLAIAH--KETLKGLSYLQGEGLFHKNISAGHIL----HNIFNDDTRNX 127
           ++   +   ++ LAIA+  +  LK L Y+   G  H+++ A HIL      ++    R+ 
Sbjct: 119 TH---FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSN 175
Query: 128 XXXXXXXXXXXX---------------XPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
                                       PEV+      Y  KSDI+ +GITA +   G +
Sbjct: 176 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 235
Query: 173 PVSRRQDLDIMTKMLMKQPKST-------------SLQVAPNEDTTHGT----------- 208
           P    +D+   T+ML+++   T              L ++P+    +             
Sbjct: 236 PF---KDMP-ATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPR 291
Query: 209 ------------RTLSKNFWNMVKICLAPDPAKRPAA 233
                       RT S +F + V+ CL  +P  RP+A
Sbjct: 292 PSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA 328

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 107/277 (38%), Gaps = 78/277 (28%)
Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
           L  E++  K  +HPNI+P   T I+  +L+          + S M Y      +A  LI 
Sbjct: 57  LQGELHVSKLFNHPNIVPYRATFIADNELWV---------VTSFMAYG-----SAKDLIC 102
Query: 74  SNRHRYGITVDCLAIAH--KETLKGLSYLQGEGLFHKNISAGHIL----HNIFNDDTRNX 127
           ++   +   ++ LAIA+  +  LK L Y+   G  H+++ A HIL      ++    R+ 
Sbjct: 103 TH---FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSN 159
Query: 128 XXXXXXXXXXXX---------------XPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
                                       PEV+      Y  KSDI+ +GITA +   G +
Sbjct: 160 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 219
Query: 173 PVSRRQDLDIMTKMLMKQPKST-------------SLQVAPNEDTTHGT----------- 208
           P    +D+   T+ML+++   T              L ++P+    +             
Sbjct: 220 PF---KDMP-ATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPR 275
Query: 209 ------------RTLSKNFWNMVKICLAPDPAKRPAA 233
                       RT S +F + V+ CL  +P  RP+A
Sbjct: 276 PSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA 312

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/247 (20%), Positives = 92/247 (37%), Gaps = 50/247 (20%)
Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQR---QLFYAEIACMIGSLDSIMTYRPLNSPAATQ 70
           L  EI  +KHL H NI+  Y    S+    ++F  ++    GSL +++            
Sbjct: 52  LHEEIALHKHLKHKNIVQ-YLGSFSENGFIKIFMEQVPG--GSLSALL------------ 96
Query: 71  LIMSNRHRYGITVD---CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR-- 125
                R ++G   D    +    K+ L+GL YL    + H++I   ++L N ++   +  
Sbjct: 97  -----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKIS 151
Query: 126 -----------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                      N              PE+++ G   Y   +DIW +G T ++   G  P 
Sbjct: 152 DFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
                        + +P++   +V   +       ++S      +  C  PDP KR  A 
Sbjct: 212 YE-----------LGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACAN 260
Query: 235 AQVLQEM 241
             ++ E 
Sbjct: 261 DLLVDEF 267

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 95/256 (37%), Gaps = 48/256 (18%)
Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           VID   + EE      EI       HPNI+ +      +  L+     C  G++D++M  
Sbjct: 69  VIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 61  --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
             RPL                 I V C     K+TL  L+YL    + H+++ AG+IL  
Sbjct: 128 LERPLTESQ-------------IQVVC-----KQTLDALNYLHDNKIIHRDLKAGNILFT 169
Query: 119 IFND-----------DTRNXXXXXXXXXXXX-XXPEVV---NFGDDYYSCKSDIWLIGIT 163
           +  D           +TR                PEVV      D  Y  K+D+W +GIT
Sbjct: 170 LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL 223
            ++      P      + ++ K+   +P            T       S NF + +K CL
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPP-----------TLAQPSRWSSNFKDFLKKCL 278
Query: 224 APDPAKRPAAEAQVLQ 239
             +   R    +Q+LQ
Sbjct: 279 EKNVDARWTT-SQLLQ 293

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/247 (20%), Positives = 92/247 (37%), Gaps = 50/247 (20%)
Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQR---QLFYAEIACMIGSLDSIMTYRPLNSPAATQ 70
           L  EI  +KHL H NI+  Y    S+    ++F  ++    GSL +++            
Sbjct: 66  LHEEIALHKHLKHKNIVQ-YLGSFSENGFIKIFMEQVPG--GSLSALL------------ 110
Query: 71  LIMSNRHRYGITVD---CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR-- 125
                R ++G   D    +    K+ L+GL YL    + H++I   ++L N ++   +  
Sbjct: 111 -----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKIS 165
Query: 126 -----------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                      N              PE+++ G   Y   +DIW +G T ++   G  P 
Sbjct: 166 DFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
                        + +P++   +V   +       ++S      +  C  PDP KR  A 
Sbjct: 226 YE-----------LGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACAN 274
Query: 235 AQVLQEM 241
             ++ E 
Sbjct: 275 DLLVDEF 281

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 95/256 (37%), Gaps = 48/256 (18%)
Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           VID   + EE      EI       HPNI+ +      +  L+     C  G++D++M  
Sbjct: 69  VIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 61  --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
             RPL                 I V C     K+TL  L+YL    + H+++ AG+IL  
Sbjct: 128 LERPLTESQ-------------IQVVC-----KQTLDALNYLHDNKIIHRDLKAGNILFT 169
Query: 119 IFND-----------DTRNXXXXXXXXXXXX-XXPEVV---NFGDDYYSCKSDIWLIGIT 163
           +  D           +TR                PEVV      D  Y  K+D+W +GIT
Sbjct: 170 LDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL 223
            ++      P      + ++ K+   +P            T       S NF + +K CL
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPP-----------TLAQPSRWSSNFKDFLKKCL 278
Query: 224 APDPAKRPAAEAQVLQ 239
             +   R    +Q+LQ
Sbjct: 279 EKNVDARWTT-SQLLQ 293

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 96/256 (37%), Gaps = 48/256 (18%)
Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           VID   + EE      EI       HPNI+ +      +  L+     C  G++D++M  
Sbjct: 69  VIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 61  --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
             RPL                 I V C     K+TL  L+YL    + H+++ AG+IL  
Sbjct: 128 LERPLTESQ-------------IQVVC-----KQTLDALNYLHDNKIIHRDLKAGNILFT 169
Query: 119 IFND-----------DTRNXXXXXXXXXXXX-XXPEVV---NFGDDYYSCKSDIWLIGIT 163
           +  D           +TR                PEVV      D  Y  K+D+W +GIT
Sbjct: 170 LDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL 223
            ++      P      + ++ K+   +P            T       S NF + +K CL
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPP-----------TLAQPSRWSSNFKDFLKKCL 278
Query: 224 APDPAKRPAAEAQVLQ 239
             +   R    +Q+LQ
Sbjct: 279 EKNVDARWTT-SQLLQ 293

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 86  LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
           +A   +E LKGL YL  E   H++I A ++L +   +             DT+       
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTF 164
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
                   PEV+      Y  K+DIW +GITA++   G  P S    +    K+L   PK
Sbjct: 165 VGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFLIPK 218
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
           +       N  T  G    SK     V+ CL  +P+ RP A+
Sbjct: 219 N-------NPPTLEG--NYSKPLKEFVEACLNKEPSFRPTAK 251

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 86  LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
           +A   +E LKGL YL  E   H++I A ++L +   +             DT+       
Sbjct: 126 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTF 184
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
                   PEV+      Y  K+DIW +GITA++   G  P S    +    K+L   PK
Sbjct: 185 VGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFLIPK 238
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
           +       N  T  G    SK     V+ CL  +P+ RP A+
Sbjct: 239 N-------NPPTLEG--NYSKPLKEFVEACLNKEPSFRPTAK 271

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 29/162 (17%)
Query: 86  LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
           +A   +E LKGL YL  E   H++I A ++L +   +             DT+       
Sbjct: 121 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNXF 179
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
                   PEV+      Y  K+DIW +GITA++   G  P S    +    K+L   PK
Sbjct: 180 VGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFLIPK 233
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
           +       N  T  G    SK     V+ CL  +P+ RP A+
Sbjct: 234 N-------NPPTLEG--NYSKPLKEFVEACLNKEPSFRPTAK 266

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 29/162 (17%)
Query: 86  LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
           +A   +E LKGL YL  E   H++I A ++L +   +             DT+       
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNXF 164
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
                   PEV+      Y  K+DIW +GITA++   G  P S    +    K+L   PK
Sbjct: 165 VGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFLIPK 218
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
           +       N  T  G    SK     V+ CL  +P+ RP A+
Sbjct: 219 N-------NPPTLEG--NYSKPLKEFVEACLNKEPSFRPTAK 251

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 89/247 (36%), Gaps = 48/247 (19%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           ++  EI   K L HPNII I++       ++     C  G L               +++
Sbjct: 66  QIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL-------------LERIV 112
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH--------------- 117
            +      ++   +A   K+ +  L+Y   + + HK++   +IL                
Sbjct: 113 SAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFG 172
Query: 118 --NIFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVS 175
              +F  D  +              PEV  F  D  + K DIW  G+       G LP +
Sbjct: 173 LAELFKSDEHSTNAAGTALYMA---PEV--FKRDV-TFKCDIWSAGVVMYFLLTGCLPFT 226
Query: 176 RRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA 235
                ++  K   K+P           +     R L+    +++K  L  DP +RP+A A
Sbjct: 227 GTSLEEVQQKATYKEP-----------NYAVECRPLTPQAVDLLKQMLTKDPERRPSA-A 274
Query: 236 QVLQEMW 242
           QVL   W
Sbjct: 275 QVLHHEW 281

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 43/246 (17%)
Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAA 68
           EE      EI       HP I+ +        +L+     C  G++D+IM          
Sbjct: 50  EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM---------- 99
Query: 69  TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------F 120
              +  +R   G+T   + +  ++ L+ L++L  + + H+++ AG++L  +        F
Sbjct: 100 ---LELDR---GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADF 153
Query: 121 NDDTRNXXXXXXXXXXXXX----XPEVV---NFGDDYYSCKSDIWLIGITALQFPCGGLP 173
               +N                  PEVV      D  Y  K+DIW +GIT ++      P
Sbjct: 154 GVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
                 + ++ K+    P +    + P++         S  F + +KI L  +P  RP+A
Sbjct: 214 HHELNPMRVLLKIAKSDPPTL---LTPSK--------WSVEFRDFLKIALDKNPETRPSA 262
Query: 234 EAQVLQ 239
            AQ+L+
Sbjct: 263 -AQLLE 267

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 43/246 (17%)
Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAA 68
           EE      EI       HP I+ +        +L+     C  G++D+IM          
Sbjct: 58  EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM---------- 107
Query: 69  TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------F 120
              +  +R   G+T   + +  ++ L+ L++L  + + H+++ AG++L  +        F
Sbjct: 108 ---LELDR---GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADF 161
Query: 121 NDDTRNXXXXXXXXXXXXX----XPEVV---NFGDDYYSCKSDIWLIGITALQFPCGGLP 173
               +N                  PEVV      D  Y  K+DIW +GIT ++      P
Sbjct: 162 GVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
                 + ++ K+    P +    + P++         S  F + +KI L  +P  RP+A
Sbjct: 222 HHELNPMRVLLKIAKSDPPTL---LTPSK--------WSVEFRDFLKIALDKNPETRPSA 270
Query: 234 EAQVLQ 239
            AQ+L+
Sbjct: 271 -AQLLE 275

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 51/256 (19%)
Query: 1   VIDINHQAEEYAKLAREIYRYKHLSH-PNIIPIYKTMISQR------QLFYAEIACMIGS 53
           V+D+    EE  ++ +EI   K  SH  NI   Y   I +       QL+     C  GS
Sbjct: 56  VMDVTGDEEE--EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGS 113
Query: 54  LDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAG 113
           +  ++     N+               +  + +A   +E L+GLS+L    + H++I   
Sbjct: 114 VTDLIKNTKGNT---------------LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQ 158
Query: 114 HILHNIFND------------DTRNXXXXXXXXXXXXXXPEVVNFG---DDYYSCKSDIW 158
           ++L     +            D                 PEV+      D  Y  KSD+W
Sbjct: 159 NVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLW 218
Query: 159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM 218
            +GITA++   G  P+    D+  M  + +         +  N      ++  SK F + 
Sbjct: 219 SLGITAIEMAEGAPPLC---DMHPMRALFL---------IPRNPAPRLKSKKWSKKFQSF 266
Query: 219 VKICLAPDPAKRPAAE 234
           ++ CL  + ++RPA E
Sbjct: 267 IESCLVKNHSQRPATE 282

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 151 YSCKSDIWLIGITALQFPCGGLPVSRRQDL-DIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
           Y  +SD+W +GIT  +   G  P  +   + D +T+++   P     Q++ +E+     R
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPP----QLSNSEE-----R 256
Query: 210 TLSKNFWNMVKICLAPDPAKRP 231
             S +F N V +CL  D +KRP
Sbjct: 257 EFSPSFINFVNLCLTKDESKRP 278

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 151 YSCKSDIWLIGITALQFPCGGLPVSR-RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
           Y  ++D+W +GI+ ++   G  P    + D +++TK+L ++P      + P      G  
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP-----PLLP------GHM 254
Query: 210 TLSKNFWNMVKICLAPDPAKRP 231
             S +F + VK CL  D  KRP
Sbjct: 255 GFSGDFQSFVKDCLTKDHRKRP 276

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 45/216 (20%)
Query: 16  REIYRYKHLSHPNIIPIY---KTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           RE    K L+H NI+ ++   +   ++ ++   E  C  GSL     Y  L  P+     
Sbjct: 56  REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF-CPCGSL-----YTVLEEPS----- 104
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXX 132
               + YG+      I  ++ + G+++L+  G+ H+NI  G+I+  I  D          
Sbjct: 105 ----NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Query: 133 XXXXXXXXPE--VVNFG-DDY------------------YSCKSDIWLIGITALQFPCGG 171
                    E  V  +G ++Y                  Y    D+W IG+T      G 
Sbjct: 161 GAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220
Query: 172 LPV----SRRQDLDIMTKMLMKQPKS--TSLQVAPN 201
           LP       R++ ++M K++  +P    + +Q A N
Sbjct: 221 LPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN 256

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 83/216 (38%), Gaps = 45/216 (20%)
Query: 16  REIYRYKHLSHPNIIPIY---KTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           RE    K L+H NI+ ++   +   ++ ++   E  C  GSL     Y  L  P+     
Sbjct: 56  REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF-CPCGSL-----YTVLEEPS----- 104
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
               + YG+      I  ++ + G+++L+  G+ H+NI  G+I+  I             
Sbjct: 105 ----NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Query: 120 -----FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDY---YSCKSDIWLIGITALQFPCGG 171
                  DD +                E      D+   Y    D+W IG+T      G 
Sbjct: 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220
Query: 172 LPV----SRRQDLDIMTKMLMKQPKS--TSLQVAPN 201
           LP       R++ ++M K++  +P    + +Q A N
Sbjct: 221 LPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN 256

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           K  +E    +   HP+I+ +   +I++  ++     C +G L S +  R           
Sbjct: 57  KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 104
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
                +Y + +  L +   +    L+YL+ +   H++I+A ++L +              
Sbjct: 105 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
           + +D+                PE +NF    ++  SD+W+ G+   +    G+ P    +
Sbjct: 160 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
           + D++ ++         L + PN   T          ++++  C A DP++RP
Sbjct: 218 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 257

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           K  +E    +   HP+I+ +   +I++  ++     C +G L S +  R           
Sbjct: 57  KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 104
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
                +Y + +  L +   +    L+YL+ +   H++I+A ++L +              
Sbjct: 105 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
           + +D+                PE +NF    ++  SD+W+ G+   +    G+ P    +
Sbjct: 160 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
           + D++ ++         L + PN   T          ++++  C A DP++RP
Sbjct: 218 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 257

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           K  +E    +   HP+I+ +   +I++  ++     C +G L S +  R           
Sbjct: 59  KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 106
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
                +Y + +  L +   +    L+YL+ +   H++I+A ++L +              
Sbjct: 107 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
           + +D+                PE +NF    ++  SD+W+ G+   +    G+ P    +
Sbjct: 162 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 219
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
           + D++ ++         L + PN   T          ++++  C A DP++RP
Sbjct: 220 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 259

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           K  +E    +   HP+I+ +   +I++  ++     C +G L S +  R           
Sbjct: 54  KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 101
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
                +Y + +  L +   +    L+YL+ +   H++I+A ++L +              
Sbjct: 102 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
           + +D+                PE +NF    ++  SD+W+ G+   +    G+ P    +
Sbjct: 157 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 214
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
           + D++ ++         L + PN   T          ++++  C A DP++RP
Sbjct: 215 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 254

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           K  +E    +   HP+I+ +   +I++  ++     C +G L S +  R           
Sbjct: 62  KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 109
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
                +Y + +  L +   +    L+YL+ +   H++I+A ++L +              
Sbjct: 110 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
           + +D+                PE +NF    ++  SD+W+ G+   +    G+ P    +
Sbjct: 165 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
           + D++ ++         L + PN   T          ++++  C A DP++RP
Sbjct: 223 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 262

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           K  +E    +   HP+I+ +   +I++  ++     C +G L S +  R           
Sbjct: 85  KFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVR----------- 132
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
                +Y + +  L +   +    L+YL+ +   H++I+A ++L +              
Sbjct: 133 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
           + +D+                PE +NF    ++  SD+W+ G+   +    G+ P    +
Sbjct: 188 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 245
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
           + D++ ++         L + PN   T          ++++  C A DP++RP
Sbjct: 246 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 285

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
           K  +E    +   HP+I+ +   +I++  ++     C +G L S +  R           
Sbjct: 60  KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 107
Query: 73  MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
                +Y + +  L +   +    L+YL+ +   H++I+A ++L +              
Sbjct: 108 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
           + +D+                PE +NF    ++  SD+W+ G+   +    G+ P    +
Sbjct: 163 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 220
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
           + D++ ++         L + PN   T          ++++  C A DP++RP
Sbjct: 221 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 260

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 48/256 (18%)
Query: 3   DINHQAEEY-AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
           D N   E++  ++  EI   K L HPNII ++  +   ++ FY            ++T  
Sbjct: 81  DDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF-DVFEDKKYFY------------LVTEF 127
Query: 62  PLNSPAATQLIMSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHIL---- 116
                   Q+I  NRH++    +C  A   K+ L G+ YL    + H++I   +IL    
Sbjct: 128 YEGGELFEQII--NRHKFD---ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK 182
Query: 117 HNIFNDD----------TRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ 166
           +++ N            +++              PEV+      Y+ K D+W  G+    
Sbjct: 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK---KKYNEKCDVWSCGVIMYI 239
Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
             CG  P   + D DI+ K          ++        +  + +S     ++K+ L  D
Sbjct: 240 LLCGYPPFGGQNDQDIIKK----------VEKGKYYFDFNDWKNISDEAKELIKLMLTYD 289
Query: 227 PAKRPAAEAQVLQEMW 242
             KR  AE + L   W
Sbjct: 290 YNKRCTAE-EALNSRW 304

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	245
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-25
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-22
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-20
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-18
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	7e-18
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	8e-16
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-16
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-15
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-15
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-15
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-15
3aln_A	327	Dual specificity mitogen-activated protein kinase;	5e-15
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-14
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-14
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-13
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-13
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-13
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-12
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-12
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-11
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-11
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-09
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-09
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-09
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	9e-09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-08
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-07
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-07
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-06
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-06
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-05
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	6e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	8e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	9e-05
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-04
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-04
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-04
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-04
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-04
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-04
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	5e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	5e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	6e-04
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	6e-04

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 99.7 bits (249), Expect = 4e-25
 Identities = 59/252 (23%), Positives = 95/252 (37%), Gaps = 33/252 (13%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            I++        +L +EI       HPNI+  Y + + + +L+        GS+  I+ +
Sbjct: 47  RINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH 106

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
                   +           +    +A   +E L+GL YL   G  H+++ AG+IL    
Sbjct: 107 IVAKGEHKSG---------VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED 157

Query: 121 ND-------------DTRNWISSSSSIT---T--WAAAPEVVNFGDDYYSCKSDIWLIGI 162
                             +   +    T   T  W A PEV+     Y   K+DIW  GI
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA-PEVMEQVRGY-DFKADIWSFGI 215

Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
           TA++   G  P         M K+LM   ++    +          +   K+F  M+ +C
Sbjct: 216 TAIELATGAAPYH---KYPPM-KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLC 271

Query: 223 LAPDPAKRPAAE 234
           L  DP KRP A 
Sbjct: 272 LQKDPEKRPTAA 283

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 94.2 bits (234), Expect = 1e-22
 Identities = 60/295 (20%), Positives = 102/295 (34%), Gaps = 85/295 (28%)

Query: 1   VIDINHQAEEYAK-LAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLD 55
            I++   + E    L  E++  K  +HPNI+P   T I+  +L+    +       GS  
Sbjct: 59  RINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF----MAYGSAK 114

Query: 56  SIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHI 115
            ++                     G+    +A   +  LK L Y+   G  H+++ A HI
Sbjct: 115 DLIC---------------THFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHI 159

Query: 116 L---------------HNIFNDDTRN---WISSSSSITT--WAAAPEVVNFGDDYYSCKS 155
           L                ++ +   R          S+    W  +PEV+      Y  KS
Sbjct: 160 LISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPW-LSPEVLQQNLQGYDAKS 218

Query: 156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK----------------------- 192
           DI+ +GITA +   G +P     D+    +ML+++                         
Sbjct: 219 DIYSVGITACELANGHVPFK---DMPAT-QMLLEKLNGTVPCLLDTSTIPAEELTMSPSR 274

Query: 193 -------------STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
                        ST      +  +    RT S +F + V+ CL  +P  RP+A 
Sbjct: 275 SVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSAS 329

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 86.2 bits (214), Expect = 4e-20
 Identities = 61/252 (24%), Positives = 99/252 (39%), Gaps = 57/252 (22%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           +ID+    +E   + +EI        P +   Y + +   +L+        GS   ++  
Sbjct: 54  IIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP 113

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
            PL+                     +A   +E LKGL YL  E   H++I A ++L    
Sbjct: 114 GPLDET------------------QIATILREILKGLDYLHSEKKIHRDIKAANVL---L 152

Query: 121 NDD--------------TRNWISSSSSITT--WAAAPEVVNFGDDYYSCKSDIWLIGITA 164
           ++               T   I  ++ + T  W A PEV+      Y  K+DIW +GITA
Sbjct: 153 SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMA-PEVIK--QSAYDSKADIWSLGITA 209

Query: 165 LQFPCGGLPVSRRQDLDIMTKMLMKQPKST--SLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
           ++   G  P S   +L  M K+L   PK+   +L+              SK     V+ C
Sbjct: 210 IELARGEPPHS---ELHPM-KVLFLIPKNNPPTLE-----------GNYSKPLKEFVEAC 254

Query: 223 LAPDPAKRPAAE 234
           L  +P+ RP A+
Sbjct: 255 LNKEPSFRPTAK 266

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 81.2 bits (201), Expect = 2e-18
 Identities = 58/253 (22%), Positives = 98/253 (38%), Gaps = 51/253 (20%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           VI+   + EE      EI       HP I+ +        +L+     C  G++D+IM  
Sbjct: 51  VIETKSE-EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE 109

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
                              G+T   + +  ++ L+ L++L  + + H+++ AG++L    
Sbjct: 110 LD----------------RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVL---M 150

Query: 121 NDD--------------TRNWISSSSSITT--WAAAPEVV---NFGDDYYSCKSDIWLIG 161
             +               +      S I T  W A PEVV      D  Y  K+DIW +G
Sbjct: 151 TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMA-PEVVMCETMKDTPYDYKADIWSLG 209

Query: 162 ITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI 221
           IT ++      P     +L+ M ++L+K  KS    +             S  F + +KI
Sbjct: 210 ITLIEMAQIEPPHH---ELNPM-RVLLKIAKSDPPTLLTPSK-------WSVEFRDFLKI 258

Query: 222 CLAPDPAKRPAAE 234
            L  +P  RP+A 
Sbjct: 259 ALDKNPETRPSAA 271

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 80.1 bits (198), Expect = 7e-18
 Identities = 64/247 (25%), Positives = 97/247 (39%), Gaps = 46/247 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            + +    +E  K   EI   +    P+++  Y +      L+     C  GS+  I+  
Sbjct: 61  QVPVESDLQEIIK---EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL 117

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
           R                   +T D +A   + TLKGL YL      H++I AG+IL N  
Sbjct: 118 RN----------------KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTE 161

Query: 121 ND----D-------TRNWISSSSSITT--WAAAPEVVNFGDDYYSCKSDIWLIGITALQF 167
                 D       T      ++ I T  W A PEV+   +  Y+C +DIW +GITA++ 
Sbjct: 162 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMA-PEVIQ--EIGYNCVADIWSLGITAIEM 218

Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
             G  P +   D+  M + +   P +      P   T       S NF + VK CL   P
Sbjct: 219 AEGKPPYA---DIHPM-RAIFMIPTNPP----P---TFRKPELWSDNFTDFVKQCLVKSP 267

Query: 228 AKRPAAE 234
            +R  A 
Sbjct: 268 EQRATAT 274

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 73.9 bits (182), Expect = 8e-16
 Identities = 52/250 (20%), Positives = 90/250 (36%), Gaps = 52/250 (20%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            +++  Q  +   +  EI   +   +PNI+    + +   +L+        GSL  ++T 
Sbjct: 52  QMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
             ++                I   C     +E L+ L +L    + H++I + +IL    
Sbjct: 111 TCMDEGQ-------------IAAVC-----RECLQALEFLHSNQVIHRDIKSDNIL---L 149

Query: 121 NDD--------------TRNWISSSSSITT--WAAAPEVVNFGDDYYSCKSDIWLIGITA 164
             D              T      S+ + T  W  APEVV      Y  K DIW +GI A
Sbjct: 150 GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW-MAPEVVT--RKAYGPKVDIWSLGIMA 206

Query: 165 LQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA 224
           ++   G  P     + + + + L     +      P          LS  F + +  CL 
Sbjct: 207 IEMIEGEPPYL---NENPL-RALYLIATNG----TP---ELQNPEKLSAIFRDFLNRCLE 255

Query: 225 PDPAKRPAAE 234
            D  KR +A+
Sbjct: 256 MDVEKRGSAK 265

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 73.9 bits (182), Expect = 9e-16
 Identities = 49/256 (19%), Positives = 90/256 (35%), Gaps = 55/256 (21%)

Query: 1   VIDINHQAEEYAKLAREI-YRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
            +  +   EE  ++  ++    K    P I+  + T I+   +F A +  M    + +  
Sbjct: 57  QMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA-MELMGTCAEKLKK 115

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGE-GLFHKNISAGHILHN 118
                                I    L       +K L YL+ + G+ H+++   +IL +
Sbjct: 116 RMQ----------------GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD 159

Query: 119 IFNDDTRNWI-----------SSSSSITTWAA-----APEVVN---FGDDYYSCKSDIWL 159
                 R  I               +    A      APE ++        Y  ++D+W 
Sbjct: 160 -----ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWS 214

Query: 160 IGITALQFPCGGLPVSR-RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM 218
           +GI+ ++   G  P    + D +++TK+L ++P        P           S +F + 
Sbjct: 215 LGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL-----LPGHM------GFSGDFQSF 263

Query: 219 VKICLAPDPAKRPAAE 234
           VK CL  D  KRP   
Sbjct: 264 VKDCLTKDHRKRPKYN 279

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 74.0 bits (182), Expect = 1e-15
 Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 66/258 (25%)

Query: 1   VIDINHQ--AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSL 54
            +  + +   E++  + +E+   + L HPN I      + +   +    Y      +GS 
Sbjct: 86  KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-----CLGSA 140

Query: 55  DSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGH 114
             ++                      +    +A      L+GL+YL    + H+++ AG+
Sbjct: 141 SDLLEVHK----------------KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN 184

Query: 115 ILHNIFNDD---------------TRNWISSSSSITT--WAAAPEVVNFGDD-YYSCKSD 156
           IL    ++                  N     S + T  W A PEV+   D+  Y  K D
Sbjct: 185 IL---LSEPGLVKLGDFGSASIMAPAN-----SFVGTPYWMA-PEVILAMDEGQYDGKVD 235

Query: 157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFW 216
           +W +GIT ++      P+    +++ M   L    ++ S  +             S+ F 
Sbjct: 236 VWSLGITCIELAERKPPLF---NMNAM-SALYHIAQNESPALQSGH--------WSEYFR 283

Query: 217 NMVKICLAPDPAKRPAAE 234
           N V  CL   P  RP +E
Sbjct: 284 NFVDSCLQKIPQDRPTSE 301

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 73.1 bits (180), Expect = 2e-15
 Identities = 52/255 (20%), Positives = 87/255 (34%), Gaps = 49/255 (19%)

Query: 6   HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYR 61
             +     L  EI  +KHL H NI+    +      +             GSL +++  +
Sbjct: 58  RDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ----VPGGSLSALLRSK 113

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN 121
                   Q I         T        K+ L+GL YL    + H++I   ++L N ++
Sbjct: 114 WGPLKDNEQTIGF------YT--------KQILEGLKYLHDNQIVHRDIKGDNVLINTYS 159

Query: 122 ------D-----DTRNWISSSSSIT-T--WAAAPEVVNFGDDYYSCKSDIWLIGITALQF 167
                 D             + + T T  +  APE+++ G   Y   +DIW +G T ++ 
Sbjct: 160 GVLKISDFGTSKRLAGINPCTETFTGTLQY-MAPEIIDKGPRGYGKAADIWSLGCTIIEM 218

Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
             G  P     +L      + K          P          +S      +  C  PDP
Sbjct: 219 ATGKPPFY---ELGEPQAAMFKVGMFKVHPEIPES--------MSAEAKAFILKCFEPDP 267

Query: 228 AKRPAAEAQVLQEMW 242
            KR  A   +L + +
Sbjct: 268 DKRACA-NDLLVDEF 281

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 73.2 bits (180), Expect = 2e-15
 Identities = 49/247 (19%), Positives = 96/247 (38%), Gaps = 46/247 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           ++D+  Q +    L  E+   +   H N++ +YK+ +   +L+        G+L  I++ 
Sbjct: 77  MMDLRKQ-QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ 135

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
             LN                I   C     +  L+ L+YL  +G+ H++I +  IL  + 
Sbjct: 136 VRLNEEQ-------------IATVC-----EAVLQALAYLHAQGVIHRDIKSDSILLTLD 177

Query: 121 ND----D-------TRNWISSSSSITT--WAAAPEVVNFGDDYYSCKSDIWLIGITALQF 167
                 D       +++     S + T  W A PEV++     Y+ + DIW +GI  ++ 
Sbjct: 178 GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMA-PEVIS--RSLYATEVDIWSLGIMVIEM 234

Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
             G  P         + + + +   S      P       +  +S    + ++  L  DP
Sbjct: 235 VDGEPPYF---SDSPV-QAMKRLRDSP----PP---KLKNSHKVSPVLRDFLERMLVRDP 283

Query: 228 AKRPAAE 234
            +R  A+
Sbjct: 284 QERATAQ 290

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 72.4 bits (178), Expect = 4e-15
 Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 59/260 (22%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAE---IA---CMIGS 53
           V+D+    EE  ++ +EI   K  S H NI   Y   I +      +   +    C  GS
Sbjct: 56  VMDVTGDEEE--EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGS 113

Query: 54  LDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAG 113
           +  ++     N+               +  + +A   +E L+GLS+L    + H++I   
Sbjct: 114 VTDLIKNTKGNT---------------LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQ 158

Query: 114 HILHNIFNDD--------------TRNWISSSSSITT--WAAAPEVV---NFGDDYYSCK 154
           ++L     ++               R     ++ I T  W A PEV+      D  Y  K
Sbjct: 159 NVL---LTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA-PEVIACDENPDATYDFK 214

Query: 155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKN 214
           SD+W +GITA++   G  P+    D+  M + L   P++ + ++   +         SK 
Sbjct: 215 SDLWSLGITAIEMAEGAPPLC---DMHPM-RALFLIPRNPAPRLKSKK--------WSKK 262

Query: 215 FWNMVKICLAPDPAKRPAAE 234
           F + ++ CL  + ++RPA E
Sbjct: 263 FQSFIESCLVKNHSQRPATE 282

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 72.0 bits (177), Expect = 5e-15
 Identities = 52/254 (20%), Positives = 91/254 (35%), Gaps = 46/254 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
            I      +E  +L  ++      S  P I+  Y  +  +   +   +  M  S D    
Sbjct: 54  RIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC-MELMSTSFDKFY- 111

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEG-LFHKNISAGHILHN 118
                     + + S      I  + L      T+K L++L+    + H++I   +IL +
Sbjct: 112 ----------KYVYSVLDD-VIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD 160

Query: 119 IFNDDTRNWI-----------SSSSSITTWAA-----APEVVNFG--DDYYSCKSDIWLI 160
                    I             S + T  A      APE ++       Y  +SD+W +
Sbjct: 161 -----RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSL 215

Query: 161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK 220
           GIT  +   G  P       + +   L +  K    Q++ +E+     R  S +F N V 
Sbjct: 216 GITLYELATGRFPYP---KWNSVFDQLTQVVKGDPPQLSNSEE-----REFSPSFINFVN 267

Query: 221 ICLAPDPAKRPAAE 234
           +CL  D +KRP  +
Sbjct: 268 LCLTKDESKRPKYK 281

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 70.3 bits (172), Expect = 2e-14
 Identities = 47/285 (16%), Positives = 95/285 (33%), Gaps = 80/285 (28%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACM----IGSLDS 56
           +I +  +     ++ RE+      + P I+  Y    S  ++      CM     GSLD 
Sbjct: 65  LIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQ 120

Query: 57  IMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEG-LFHKNISAGHI 115
           ++                 +    I    L       +KGL+YL+ +  + H+++   +I
Sbjct: 121 VL-----------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 163

Query: 116 LHNI--------FNDDTRNWIS---SSSSITTWAA-----APEVVNFGDDYYSCKSDIWL 159
           L N         F       +S     S   ++       +PE +     +YS +SDIW 
Sbjct: 164 LVNSRGEIKLCDFG------VSGQLIDSMANSFVGTRSYMSPERLQ--GTHYSVQSDIWS 215

Query: 160 IGITAL-----QFP-----CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
           +G++ +     ++P        L +     ++        +P++    +      +    
Sbjct: 216 MGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPM 275

Query: 210 TL--------------------SKNFWNMVKICLAPDPAKRPAAE 234
            +                    S  F + V  CL  +PA+R   +
Sbjct: 276 AIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 320

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 69.3 bits (169), Expect = 6e-14
 Identities = 32/269 (11%), Positives = 73/269 (27%), Gaps = 46/269 (17%)

Query: 6   HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNS 65
           +   E  +L    +    L   +           R L  ++   +             + 
Sbjct: 101 NSRSELERLHEATFAAARLLGESPEEARDRR---RLLLPSDAVAVQSQPPFAQLSPGQDD 157

Query: 66  PAATQLIM------------------SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFH 107
            A    ++                      R    +  L I   + ++  + LQ +GL H
Sbjct: 158 YAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVH 217

Query: 108 KNISAGHILHNIFNDD------------TRNWISSSSSITTWAAAPEVVNFGDDYYSCKS 155
            + +  ++       D                   +SS+    A  E +N     ++   
Sbjct: 218 GHFTPDNLF---IMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHAL 274

Query: 156 DIWLIGITALQFPCGGLP--VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSK 213
           + W +G++  +  C  LP  +          +  ++ P + SL              L  
Sbjct: 275 NAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGS-------CTPLPD 327

Query: 214 NFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
               ++   L  D  +R     + ++   
Sbjct: 328 FVKTLIGRFLNFDRRRRLLPL-EAMETPE 355

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 42/255 (16%), Positives = 77/255 (30%), Gaps = 52/255 (20%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
            I     ++E  +L  ++         P  +  Y  +  +  ++   +  M  SLD    
Sbjct: 39  RIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC-MELMDTSLDKFYK 97

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEG-LFHKNISAGHILHN 118
                                I  D L       +K L +L  +  + H+++   ++L N
Sbjct: 98  Q-------------VIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN 144

Query: 119 IFNDDTRNWI-----------SSSSSITTWAA-----APEVVN--FGDDYYSCKSDIWLI 160
                    +               +    A      APE +N       YS KSDIW +
Sbjct: 145 -----ALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199

Query: 161 GITALQFPCGGLP-VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMV 219
           GIT ++      P  S       + +++ +          P +         S  F +  
Sbjct: 200 GITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ-----LPADK-------FSAEFVDFT 247

Query: 220 KICLAPDPAKRPAAE 234
             CL  +  +RP   
Sbjct: 248 SQCLKKNSKERPTYP 262

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 65.4 bits (160), Expect = 8e-13
 Identities = 40/253 (15%), Positives = 87/253 (34%), Gaps = 52/253 (20%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYK----TMISQRQL-FYAEIACMIGSLD 55
           + D      E  +   E    K L HPNI+  Y     T+  ++ +    E+    G+L 
Sbjct: 59  LQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL-MTSGTLK 117

Query: 56  SIMT-YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYL--QGEGLFHKNISA 112
           + +  ++ +                 +   C     ++ LKGL +L  +   + H+++  
Sbjct: 118 TYLKRFKVMKIKV-------------LRSWC-----RQILKGLQFLHTRTPPIIHRDLKC 159

Query: 113 GHILHNIFN------D---DTRNWISSSSSI--TTWAAAPEVVNFGDDYYSCKSDIWLIG 161
            +I            D    T    S + ++  T    APE+    ++ Y    D++  G
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMY---EEKYDESVDVYAFG 216

Query: 162 ITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI 221
           +  L+      P S  Q+   + + +    K  S             +        +++ 
Sbjct: 217 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFD-----------KVAIPEVKEIIEG 265

Query: 222 CLAPDPAKRPAAE 234
           C+  +  +R + +
Sbjct: 266 CIRQNKDERYSIK 278

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 41/245 (16%), Positives = 71/245 (28%), Gaps = 60/245 (24%)

Query: 14  LAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMT-YRPLNSPAA 68
              E+     LS P I+P+Y  +     +             GSL  ++     L     
Sbjct: 97  RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL----LEGGSLGQLIKQMGCLPED-- 150

Query: 69  TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN---------- 118
               +                  + L+GL YL    + H ++ A ++L +          
Sbjct: 151 --RALY------YL--------GQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCD 194

Query: 119 ------IFNDDTRNWISSSSSIT---TWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC 169
                 +  D     + +   I    T   APEVV         K DIW      L    
Sbjct: 195 FGHALCLQPDGLGKSLLTGDYIPGTETH-MAPEVVM--GKPCDAKVDIWSSCCMMLHMLN 251

Query: 170 GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK 229
           G  P ++     +  K+  + P        P  +        +      ++  L  +P  
Sbjct: 252 GCHPWTQYFRGPLCLKIASEPP--------PIREIPPS---CAPLTAQAIQEGLRKEPVH 300

Query: 230 RPAAE 234
           R +A 
Sbjct: 301 RASAM 305

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 64.0 bits (156), Expect = 3e-12
 Identities = 49/284 (17%), Positives = 89/284 (31%), Gaps = 61/284 (21%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI------GSL 54
           V +            RE    K L+H NI+ ++                +I      GSL
Sbjct: 41  VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK----VLIMEFCPCGSL 96

Query: 55  DSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGH 114
               T            +    + YG+      I  ++ + G+++L+  G+ H+NI  G+
Sbjct: 97  ---YTV-----------LEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGN 142

Query: 115 ILHNIFNDDTRNW----------ISSSSSITTWA-----AAPEVV------NFGDDYYSC 153
           I+  I  D    +          +       +         P++             Y  
Sbjct: 143 IMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGA 202

Query: 154 KSDIWLIGITALQFPCGGLP----VSRRQDLDIMTKMLMKQPKSTSLQVAPNED------ 203
             D+W IG+T      G LP       R++ ++M K++  +P      V   E+      
Sbjct: 203 TVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWS 262

Query: 204 -----TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
                +   +R L      ++   L  D  K    + Q   E  
Sbjct: 263 GDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD-QFFAETS 305

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 62.6 bits (152), Expect = 1e-11
 Identities = 50/285 (17%), Positives = 91/285 (31%), Gaps = 61/285 (21%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTM--ISQRQLF----YAEIACMIGSL 54
           V +            RE    K L+H NI+ ++      + R       +    C  GSL
Sbjct: 41  VFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF----CPCGSL 96

Query: 55  DSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGH 114
               T            +    + YG+      I  ++ + G+++L+  G+ H+NI  G+
Sbjct: 97  ---YTV-----------LEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGN 142

Query: 115 ILHNIFNDDTRNW----------ISSSSSITTWA-----AAPEVV------NFGDDYYSC 153
           I+  I  D    +          +       +         P++             Y  
Sbjct: 143 IMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGA 202

Query: 154 KSDIWLIGITALQFPCGGLP----VSRRQDLDIMTKMLMKQPKSTSLQVAPNED------ 203
             D+W IG+T      G LP       R++ ++M K++  +P      V   E+      
Sbjct: 203 TVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWS 262

Query: 204 -----TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH 243
                +   +R L      ++   L  D  K    + Q   E   
Sbjct: 263 GDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD-QFFAETSD 306

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 49/259 (18%), Positives = 85/259 (32%), Gaps = 73/259 (28%)

Query: 16  REIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIA---CMIGSLDSIMTYRPLNSPAATQL 71
           RE+Y +  L  H +++  Y +  ++       I    C  GSL   ++            
Sbjct: 59  REVYAHAVLGQHSHVVR-YFSAWAEDDHML--IQNEYCNGGSLADAISEN---------- 105

Query: 72  IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF--NDDTRNWIS 129
               R         L     +  +GL Y+    L H +I       NIF       N  S
Sbjct: 106 ---YRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPS----NIFISRTSIPNAAS 158

Query: 130 SSSSITTWAA-----------------------------APEVVNFGDDYYSCKSDIWLI 160
                  WA+                             A EV+   +  +  K+DI+ +
Sbjct: 159 EEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQ-ENYTHLPKADIFAL 217

Query: 161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK 220
            +T +    G  P+ R  D          + +   L   P          LS+ F  ++K
Sbjct: 218 ALTVVCA-AGAEPLPRNGDQ-------WHEIRQGRLPRIPQV--------LSQEFTELLK 261

Query: 221 ICLAPDPAKRPAAEAQVLQ 239
           + + PDP +RP+A   +++
Sbjct: 262 VMIHPDPERRPSA-MALVK 279

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 39/260 (15%), Positives = 81/260 (31%), Gaps = 82/260 (31%)

Query: 9   EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPL 63
           ++ A+   E+  ++ +  HP  + + +       L+             SL         
Sbjct: 98  KDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCG-----PSLQQHC----- 147

Query: 64  NSPAATQLIMSNRHRYGITVDCLAIAH--KETLKGLSYLQGEGLFHKNISAGHILH---- 117
                          +G ++    +    ++TL  L++L      H       ++H    
Sbjct: 148 -------------EAWGASLPEAQVWGYLRDTLLALAHL------HSQ----GLVHLDVK 184

Query: 118 --NIFNDDTRNW----------ISSSSSITT------WAAAPEVVNFGDDYYSCKSDIWL 159
             NIF                 + ++ +         + A PE++      Y   +D++ 
Sbjct: 185 PANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMA-PELLQGS---YGTAADVFS 240

Query: 160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMV 219
           +G+T L+  C        +      ++             P E T      LS    +++
Sbjct: 241 LGLTILEVACNMELPHGGEG---WQQLRQG--------YLPPEFTAG----LSSELRSVL 285

Query: 220 KICLAPDPAKRPAAEAQVLQ 239
            + L PDP  R  AE  +L 
Sbjct: 286 VMMLEPDPKLRATAE-ALLA 304

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 64/262 (24%)

Query: 7   QAEEYAKLAREIYRYKHLSHPN--IIPIYKTMISQRQLF----YAEIACMIGSL-DSIMT 59
             +       EI     L   +  II +Y   I+ + ++              L   +  
Sbjct: 66  DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN-----IDLNSWLKK 120

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFH---K--NI--SA 112
            + ++                          K  L+ +  +   G+ H   K  N     
Sbjct: 121 KKSIDPWERKSYW------------------KNMLEAVHTIHQHGIVHSDLKPANFLIVD 162

Query: 113 GHI------LHNIFNDDTRNWISSSSSITTWAAAPEVV---------NFGDDYYSCKSDI 157
           G +      + N    DT + +  S   T     PE +                S KSD+
Sbjct: 163 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 222

Query: 158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWN 217
           W +G        G  P    Q ++ ++K+      +  ++               K+  +
Sbjct: 223 WSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDI---------PEKDLQD 271

Query: 218 MVKICLAPDPAKRPAAEAQVLQ 239
           ++K CL  DP +R +   ++L 
Sbjct: 272 VLKCCLKRDPKQRISIP-ELLA 292

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 55.6 bits (134), Expect = 3e-09
 Identities = 39/263 (14%), Positives = 78/263 (29%), Gaps = 64/263 (24%)

Query: 9   EEYAKLAREIYRYKHLSHPN--IIPIYKTMISQRQLF----YAEIACMIGSL-DSIMTYR 61
           +       EI     L   +  II +Y   I+ + ++              L   +   +
Sbjct: 96  QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN-----IDLNSWLKKKK 150

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFH---K--NI--SAGH 114
            ++                          K  L+ +  +   G+ H   K  N     G 
Sbjct: 151 SIDPWERKSYW------------------KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM 192

Query: 115 I------LHNIFNDDTRNWISSSSSITTWAAAPEVV---------NFGDDYYSCKSDIWL 159
           +      + N    DT + +  S         PE +                S KSD+W 
Sbjct: 193 LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252

Query: 160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMV 219
           +G        G  P    Q ++ ++K+      +  ++               K+  +++
Sbjct: 253 LGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDI---------PEKDLQDVL 301

Query: 220 KICLAPDPAKRPAAEAQVLQEMW 242
           K CL  DP +R +   ++L   +
Sbjct: 302 KCCLKRDPKQRISIP-ELLAHPY 323

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 50/279 (17%), Positives = 100/279 (35%), Gaps = 71/279 (25%)

Query: 4   INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIA-------------CM 50
           I H  E+ + +  E+     L+H  ++  Y   + +R       A             C 
Sbjct: 39  IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCE 98

Query: 51  IGSL-DSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFH-- 107
            G+L D I +            +                  ++ L+ LSY+  +G+ H  
Sbjct: 99  NGTLYDLIHSENLNQQRDEYWRLF-----------------RQILEALSYIHSQGIIHRD 141

Query: 108 -K--NI---SAGHI-------------LHNIFNDDTRNWISSSSSITTWA-----AAPEV 143
            K  NI    + ++               +I   D++N   SS ++T+        A EV
Sbjct: 142 LKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201

Query: 144 VNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNED 203
           ++ G  +Y+ K D++ +GI   +        +  + ++I+ K+     +       P + 
Sbjct: 202 LD-GTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEF------PPDF 252

Query: 204 TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
             +      K    ++++ +  DP KRP A   +L   W
Sbjct: 253 DDN----KMKVEKKIIRLLIDHDPNKRPGAR-TLLNSGW 286

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 55.2 bits (133), Expect = 5e-09
 Identities = 41/258 (15%), Positives = 89/258 (34%), Gaps = 60/258 (23%)

Query: 9   EEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYRPLN-S 65
           E ++   RE+   +    HPN+I  + T   ++  + A E+     +L   +  +     
Sbjct: 59  ECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL--CAATLQEYVEQKDFAHL 116

Query: 66  PAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR 125
                 ++                 ++T  GL++L    + H+++   +IL ++ N   +
Sbjct: 117 GLEPITLL-----------------QQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGK 159

Query: 126 NWI------------SSSSSITTWAA--------APEVVN-FGDDYYSCKSDIWLIGITA 164
                              S +  +         APE+++    +  +   DI+  G   
Sbjct: 160 IKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF 219

Query: 165 LQFPCGGLP---VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI 221
                 G      S ++  +I+               A + D  H  +        +++ 
Sbjct: 220 YYVISEGSHPFGKSLQRQANILLG-------------ACSLDCLHPEKHEDVIARELIEK 266

Query: 222 CLAPDPAKRPAAEAQVLQ 239
            +A DP KRP+A+  VL+
Sbjct: 267 MIAMDPQKRPSAK-HVLK 283

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 54.6 bits (131), Expect = 5e-09
 Identities = 30/263 (11%), Positives = 75/263 (28%), Gaps = 63/263 (23%)

Query: 6   HQAEEYAKLAREIYRYKHLSHPNIIPIYKT-----MISQRQLFYAEIACMIGSLDSIMTY 60
            QA+ + +        K      +I +        ++S+  L+    + +    + ++++
Sbjct: 137 KQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSH 196

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
              +        + +  R  +T         + ++ L+ L   GL H  +       +I 
Sbjct: 197 SSTHKS------LVHHARLQLT--------LQVIRLLASLHHYGLVHTYLR----PVDIV 238

Query: 121 NDDT------------RNWISSSSSITTWAAAPEVVN---------FGDDYYSCKSDIWL 159
            D              R+     SS++     PE+                 +   D W 
Sbjct: 239 LDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298

Query: 160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMV 219
           +G+      C  LP+++   L     +                      + + +    ++
Sbjct: 299 LGLVIYWIWCADLPITKDAALGGSEWIF------------------RSCKNIPQPVRALL 340

Query: 220 KICLAPDPAKRPAAEAQVLQEMW 242
           +  L      R     Q ++   
Sbjct: 341 EGFLRYPKEDRLLPL-QAMETPE 362

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 54.3 bits (131), Expect = 7e-09
 Identities = 38/260 (14%), Positives = 77/260 (29%), Gaps = 64/260 (24%)

Query: 9   EEYAKLAREIYRYKHLSHPN--IIPIYKTMISQRQLF----YAEIACMIGSL-DSIMTYR 61
           +       EI     L   +  II +Y   I+ + ++              L   +   +
Sbjct: 49  QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN-----IDLNSWLKKKK 103

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH---- 117
            ++                          K  L+ +  +   G+ H ++   + L     
Sbjct: 104 SIDPWERKSYW------------------KNMLEAVHTIHQHGIVHSDLKPANFLIVDGM 145

Query: 118 ---------NIFNDDTRNWISSSSSITTWAAAPEVV---------NFGDDYYSCKSDIWL 159
                    N    DT + +  S   T     PE +                S KSD+W 
Sbjct: 146 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 205

Query: 160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMV 219
           +G        G  P    Q ++ ++K+      +  ++               K+  +++
Sbjct: 206 LGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDI---------PEKDLQDVL 254

Query: 220 KICLAPDPAKRPAAEAQVLQ 239
           K CL  DP +R +   ++L 
Sbjct: 255 KCCLKRDPKQRISIP-ELLA 273

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 54.0 bits (130), Expect = 9e-09
 Identities = 41/261 (15%), Positives = 75/261 (28%), Gaps = 55/261 (21%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSL-DSIMTYRPLNSPA 67
               E+     + +   +     + +  +++    Y E      S+      +  L+   
Sbjct: 89  DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEN----DSILKFDEYFFVLDKNY 144

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH------NIFN 121
              + +                 K  L   SY+      H   +  +I H      NI  
Sbjct: 145 TCFIPIQVIKCI----------IKSVLNSFSYI------H---NEKNICHRDVKPSNILM 185

Query: 122 DDTRN-------W--ISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQF 167
           D                    I           PE  +    Y   K DIW +GI     
Sbjct: 186 DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245

Query: 168 PCGGLPVSRRQDLDIMTKMLMK------QPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI 221
               +P S +  L  +   +          ++  L    N+ +T     LS    + +K+
Sbjct: 246 FYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKL 305

Query: 222 CLAPDPAKRPAAEAQVLQEMW 242
            L  +PA+R  +E   L+  W
Sbjct: 306 FLRKNPAERITSE-DALKHEW 325

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 37/261 (14%), Positives = 72/261 (27%), Gaps = 56/261 (21%)

Query: 4   INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDS----IMT 59
           + +  E   K  RE+     L H NI+                      S        M 
Sbjct: 44  VKYNNE---KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQME 100

Query: 60  Y---RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
           +     L      Q I   R    +         ++  KG+ Y+  + L ++++      
Sbjct: 101 FCDKGTLE-----QWIEKRRGEK-LDKVLALELFEQITKGVDYIHSKKLINRDLKPS--- 151

Query: 117 HNIFNDDTRN----------WISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIG 161
            NIF  DT+            + +    T         +PE ++     Y  + D++ +G
Sbjct: 152 -NIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQIS--SQDYGKEVDLYALG 208

Query: 162 ITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI 221
           +   +                    L     S                   K    +++ 
Sbjct: 209 LILAELLHVCDTAFETSKF---FTDLRDGIISDIF---------------DKKEKTLLQK 250

Query: 222 CLAPDPAKRPAAEAQVLQEMW 242
            L+  P  RP    ++L+ + 
Sbjct: 251 LLSKKPEDRPNTS-EILRTLT 270

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 51/250 (20%), Positives = 89/250 (35%), Gaps = 47/250 (18%)

Query: 8   AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSP 66
               +KL  E+   K L HPNI+ +Y     +R  +        G L D I+     N  
Sbjct: 77  TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEV 136

Query: 67  AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR- 125
            A  +I                  K+ L G++YL    + H+++   ++L      D   
Sbjct: 137 DAAVII------------------KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALI 178

Query: 126 --------NWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
                       +   +          APEV+      Y  K D+W IG+       G  
Sbjct: 179 KIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR---KKYDEKCDVWSIGVILFILLAGYP 235

Query: 173 PVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
           P   + D +I+ K+   +    S +           + +S+   +++K  L  D  +R +
Sbjct: 236 PFGGQTDQEILRKVEKGKYTFDSPE----------WKNVSEGAKDLIKQMLQFDSQRRIS 285

Query: 233 AEAQVLQEMW 242
           A+ Q L+  W
Sbjct: 286 AQ-QALEHPW 294

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 53.1 bits (127), Expect = 2e-08
 Identities = 35/256 (13%), Positives = 71/256 (27%), Gaps = 50/256 (19%)

Query: 6   HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQL-FYAEIACMIGSLDSIMTYRPLN 64
            QA+ + +        K      +I +         L  +     M  +L +      L 
Sbjct: 142 KQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFG--EVLL 199

Query: 65  SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT 124
           S ++T   + +  R  +T+        + ++ L+ L   GL H  +    I+  +     
Sbjct: 200 SHSSTHKSLVHHARLQLTL--------QVIRLLASLHHYGLVHTYLRPVDIV--LDQRGG 249

Query: 125 ----------RNWISSSSSITTWAAAPEVV--------NFGDDYYSCKSDIWLIGITALQ 166
                     R+  S+ S I    A PE                 +   D W +G+    
Sbjct: 250 VFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
             C  LP +    L     +                      + + +    +++  L   
Sbjct: 310 IWCADLPNTDDAALGGSEWIF------------------RSCKNIPQPVRALLEGFLRYP 351

Query: 227 PAKRPAAEAQVLQEMW 242
              R     Q ++   
Sbjct: 352 KEDRLLP-LQAMETPE 366

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 46/251 (18%), Positives = 92/251 (36%), Gaps = 47/251 (18%)

Query: 7   QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNS 65
           Q  +   L RE+   K L HPNI+ +Y+    +   +        G L D I++ +  + 
Sbjct: 66  QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125

Query: 66  PAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR 125
             A ++I                  ++ L G++Y+    + H+++   ++L    + D  
Sbjct: 126 VDAARII------------------RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN 167

Query: 126 ---------NWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGG 171
                        +S  +          APEV++     Y  K D+W  G+       G 
Sbjct: 168 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSGC 224

Query: 172 LPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
            P +   + DI+ K+   +      Q           + +S++  ++++  L   P+ R 
Sbjct: 225 PPFNGANEYDILKKVEKGKYTFELPQ----------WKKVSESAKDLIRKMLTYVPSMRI 274

Query: 232 AAEAQVLQEMW 242
           +A    L   W
Sbjct: 275 SAR-DALDHEW 284

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 52.0 bits (124), Expect = 5e-08
 Identities = 35/272 (12%), Positives = 73/272 (26%), Gaps = 47/272 (17%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI------GSL 54
                   +   +   EI   K L+HPN++   +     ++L   ++  +       G L
Sbjct: 46  QCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDL 105

Query: 55  DSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGH 114
                          + +    +  G+    +     +    L YL    + H+++   +
Sbjct: 106 --------------RKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 151

Query: 115 ILHNIFNDDTR---------NWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLI 160
           I+                    +      T +       APE++      Y+   D W  
Sbjct: 152 IVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQ--KKYTVTVDYWSF 209

Query: 161 GITALQFPCGGLPV-SRRQDLDIMTKMLMKQPKSTSLQVAPNE---------DTTHGTRT 210
           G  A +   G  P     Q +    K+  K  +   +                  H +  
Sbjct: 210 GTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGI 269

Query: 211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
           L+      ++  L     +R     Q      
Sbjct: 270 LAGKLERWLQCMLMWHQRQRGTDP-QNPNVGC 300

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 51.6 bits (124), Expect = 6e-08
 Identities = 43/266 (16%), Positives = 83/266 (31%), Gaps = 72/266 (27%)

Query: 1   VIDINHQAE-EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLD 55
            I+I+  +  E  +  RE+    ++ HPNI+   ++      L+    Y E     G L 
Sbjct: 56  EINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG----GDLF 111

Query: 56  SIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHI 115
                         + I + +       D +     +    L ++      H       I
Sbjct: 112 --------------KRINAQKGVL-FQEDQILDWFVQICLALKHV------HDR----KI 146

Query: 116 LH------NIFNDDTRN----------WISSSSSITTWA------AAPEVVNFGDDYYSC 153
           LH      NIF                 ++S+  +           +PE+    +  Y+ 
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICE--NKPYNN 204

Query: 154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSK 213
           KSDIW +G    +              +++ K++       SL               S 
Sbjct: 205 KSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY-------------SY 251

Query: 214 NFWNMVKICLAPDPAKRPAAEAQVLQ 239
           +  ++V      +P  RP+    +L+
Sbjct: 252 DLRSLVSQLFKRNPRDRPSVN-SILE 276

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 37/272 (13%), Positives = 80/272 (29%), Gaps = 62/272 (22%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            I + ++     K+ RE+     L HP I+  +   + +      + +     L   M  
Sbjct: 37  RIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQL 96

Query: 61  ---RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH 117
                L        +                   +  + + +L  +GL H+++       
Sbjct: 97  CRKENLK-----DWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPS---- 147

Query: 118 NIF-------------------NDDTRNWISSSSSITTWA---------AAPEVVNFGDD 149
           NIF                    D+    + +                  +PE ++   +
Sbjct: 148 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH--GN 205

Query: 150 YYSCKSDIWLIGITA--LQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHG 207
            YS K DI+ +G+    L +P             +     +   ++        +     
Sbjct: 206 SYSHKVDIFSLGLILFELLYPFST---------QMERVRTLTDVRNLKFPPLFTQK---- 252

Query: 208 TRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
                   + MV+  L+P P +RP A   +++
Sbjct: 253 ----YPCEYVMVQDMLSPSPMERPEAI-NIIE 279

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 49/271 (18%), Positives = 92/271 (33%), Gaps = 70/271 (25%)

Query: 2   IDINHQ--AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLD 55
           + I     A+  A   +EI   K L+HPN+I  Y + I   +L      A+     G L 
Sbjct: 65  VQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD----AGDLS 120

Query: 56  S-IMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGH 114
             I  ++        + +          V        +    L ++      H       
Sbjct: 121 RMIKHFKKQKRLIPERTVWK------YFV--------QLCSALEHM------HSR----R 156

Query: 115 ILH------NIFNDDT-----------RNWISSSSSITTWA-----AAPEVVNFGDDYYS 152
           ++H      N+F   T           R + S +++  +        +PE ++  ++ Y+
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH--ENGYN 214

Query: 153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLS 212
            KSDIW +G    +             +++ +  L K+ +       P++         S
Sbjct: 215 FKSDIWSLGCLLYEM-AALQSPFYGDKMNLYS--LCKKIEQCDYPPLPSD-------HYS 264

Query: 213 KNFWNMVKICLAPDPAKRPAAEAQVLQEMWH 243
           +    +V +C+ PDP KRP     V      
Sbjct: 265 EELRQLVNMCINPDPEKRPDVT-YVYDVAKR 294

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 48.9 bits (117), Expect = 4e-07
 Identities = 39/281 (13%), Positives = 80/281 (28%), Gaps = 81/281 (28%)

Query: 6   HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI------GSL-DSIM 58
           H+ ++  +  RE   ++  +HPNI+ +    + +R   +   A ++      G+L + I 
Sbjct: 65  HEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH--EAWLLLPFFKRGTLWNEIE 122

Query: 59  TYRPLNSPAATQLIMSNRHRYGITVD-CLAIAHKETLKGLSYLQGEGLFHKNISAGHILH 117
             +   +      I+       + +  C  +                  H         H
Sbjct: 123 RLKDKGNFLTEDQILW------LLLGICRGLEA---------------IHAK----GYAH 157

Query: 118 ------NIFNDDTRNW------ISSSSSITTWAA-------------------APEVVN- 145
                 NI   D            + + I    +                   APE+ + 
Sbjct: 158 RDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSV 217

Query: 146 FGDDYYSCKSDIWLIGITALQFPCGGLP-VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDT 204
                   ++D+W +G        G  P     Q  D +   +  Q         P    
Sbjct: 218 QSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS------IPQSPR 271

Query: 205 THGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR 245
                  S   W ++   +  DP +RP     +L ++   +
Sbjct: 272 ------HSSALWQLLNSMMTVDPHQRPHIP-LLLSQLEALQ 305

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 48.5 bits (116), Expect = 7e-07
 Identities = 52/256 (20%), Positives = 90/256 (35%), Gaps = 49/256 (19%)

Query: 3   DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSL-DSIMTY 60
           D  +  + + ++  EI   K L HPNII ++     ++  +   E     G L + I+  
Sbjct: 82  DNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEF-YEGGELFEQIINR 140

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
              +   A  ++                  K+ L G+ YL    + H++I   +IL    
Sbjct: 141 HKFDECDAANIM------------------KQILSGICYLHKHNIVHRDIKPENILLENK 182

Query: 121 NDDTR---------NWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQ 166
           N             ++ S    +          APEV+      Y+ K D+W  G+    
Sbjct: 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK---KKYNEKCDVWSCGVIMYI 239

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
             CG  P   + D DI+ K+   +                  + +S     ++K+ L  D
Sbjct: 240 LLCGYPPFGGQNDQDIIKKVEKGKYYFDFND----------WKNISDEAKELIKLMLTYD 289

Query: 227 PAKRPAAEAQVLQEMW 242
             KR  AE + L   W
Sbjct: 290 YNKRCTAE-EALNSRW 304

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 47/257 (18%), Positives = 87/257 (33%), Gaps = 63/257 (24%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSPA 67
           E+  +  +EI   K L HPNII +Y+T      ++     C  G L + ++  R      
Sbjct: 48  EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 107

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR-- 125
           A +++                  K+ L  ++Y     + H+++   + L    + D+   
Sbjct: 108 AARIM------------------KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLK 149

Query: 126 -------NWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
                          + T        +P+V+      Y  + D W  G+      CG  P
Sbjct: 150 LIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL---YGPECDEWSAGVMMYVLLCGYPP 206

Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFW--------NMVKICLAP 225
            S   D ++M K+                    GT T  +  W        ++++  L  
Sbjct: 207 FSAPTDSEVMLKIR------------------EGTFTFPEKDWLNVSPQAESLIRRLLTK 248

Query: 226 DPAKRPAAEAQVLQEMW 242
            P +R  +  Q L+  W
Sbjct: 249 SPKQRITSL-QALEHEW 264

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 66/252 (26%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSL-DSIMTYRPLNSPAA-- 68
           K++ EI  ++ L+H +++  +        +F   E+ C   SL +     + L  P A  
Sbjct: 87  KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL-CRRRSLLELHKRRKALTEPEARY 145

Query: 69  --TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRN 126
              Q++                       G  YL    + H+++  G    N+F ++   
Sbjct: 146 YLRQIV----------------------LGCQYLHRNRVIHRDLKLG----NLFLNEDLE 179

Query: 127 -----------WISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
                                        APEV++     +S + D+W IG        G
Sbjct: 180 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS--KKGHSFEVDVWSIGCIMYTLLVG 237

Query: 171 GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
             P    +   +       + K     +  +         ++    ++++  L  DP  R
Sbjct: 238 KPPF---ETSCLKE--TYLRIKKNEYSIPKH---------INPVAASLIQKMLQTDPTAR 283

Query: 231 PAAEAQVLQEMW 242
           P    ++L + +
Sbjct: 284 PTIN-ELLNDEF 294

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 66/252 (26%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSL-DSIMTYRPLNSPAA-- 68
           K++ EI  ++ L+H +++  +        +F   E+ C   SL +     + L  P A  
Sbjct: 61  KMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL-CRRRSLLELHKRRKALTEPEARY 119

Query: 69  --TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRN 126
              Q++                       G  YL    + H+++  G    N+F ++   
Sbjct: 120 YLRQIV----------------------LGCQYLHRNRVIHRDLKLG----NLFLNEDLE 153

Query: 127 -----------WISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
                                        APEV++     +S + D+W IG        G
Sbjct: 154 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS--KKGHSFEVDVWSIGCIMYTLLVG 211

Query: 171 GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
             P    +   +       + K     +  +         ++    ++++  L  DP  R
Sbjct: 212 KPPF---ETSCLKE--TYLRIKKNEYSIPKH---------INPVAASLIQKMLQTDPTAR 257

Query: 231 PAAEAQVLQEMW 242
           P    ++L + +
Sbjct: 258 PTIN-ELLNDEF 268

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 43/273 (15%), Positives = 83/273 (30%), Gaps = 71/273 (26%)

Query: 1   VIDINHQ-AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI------GS 53
            +D       E   L  E+   + L HPNI+  Y  +I +          ++      G 
Sbjct: 38  ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL----YIVMEYCEGGD 93

Query: 54  LDS-IMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFH-KNIS 111
           L S I            + ++       +          +    L         H ++  
Sbjct: 94  LASVITKGTKERQYLDEEFVLR------VMT--------QLTLALKEC------HRRSDG 133

Query: 112 AGHILH------NIFNDDTRN----------WISSSSSIT-TWA-----AAPEVVNFGDD 149
              +LH      N+F D  +N           ++  +S   T+       +PE +N    
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMN--RM 191

Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
            Y+ KSDIW +G    +      P +     ++  K+   + +    +            
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY----------- 240

Query: 210 TLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
             S     ++   L      RP+ E ++L+   
Sbjct: 241 --SDELNEIITRMLNLKDYHRPSVE-EILENPL 270

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 50/268 (18%), Positives = 85/268 (31%), Gaps = 66/268 (24%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMT 59
            I+ +       ++  EI   K L HPNII I++       ++     C  G L + I++
Sbjct: 54  TINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVS 113

Query: 60  YRPLNSP----AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHI 115
            +            +L+                  K+ +  L+Y   + + HK++   +I
Sbjct: 114 AQARGKALSEGYVAELM------------------KQMMNALAYFHSQHVVHKDLKPENI 155

Query: 116 LHNIFNDDTR---------NWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIG 161
           L    +  +              S    T  A      APEV        + K DIW  G
Sbjct: 156 LFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD---VTFKCDIWSAG 212

Query: 162 ITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM--- 218
           +       G LP +     ++  K                    +     +     +   
Sbjct: 213 VVMYFLLTGCLPFTGTSLEEVQQKAT------------------YKEPNYAVECRPLTPQ 254

Query: 219 ----VKICLAPDPAKRPAAEAQVLQEMW 242
               +K  L  DP +RP+A  QVL   W
Sbjct: 255 AVDLLKQMLTKDPERRPSAA-QVLHHEW 281

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 45.2 bits (107), Expect = 8e-06
 Identities = 39/270 (14%), Positives = 82/270 (30%), Gaps = 63/270 (23%)

Query: 9   EEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIA---CMIGSLDSIMTYRPLN 64
           +       EI        HPN+I  Y +  + R L+   IA   C   +L  ++  + ++
Sbjct: 50  DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLY---IALELCN-LNLQDLVESKNVS 105

Query: 65  SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHK-----NI-----SAGH 114
                     N               ++   G+++L    + H+     NI     S   
Sbjct: 106 DENLKLQKEYNPISL----------LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT 155

Query: 115 ILHNIFNDDTR--------------NWISSSSSITTWA-----AAPEVVNFGDD-----Y 150
                  ++ R                 S  +++   +      APE++   ++      
Sbjct: 156 ADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRR 215

Query: 151 YSCKSDIWLIGITALQFPCGG-LPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
            +   DI+ +G         G  P          + ++        ++   +        
Sbjct: 216 LTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRESNIIRGIFSLDEMKCLHDRS------ 267

Query: 210 TLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
            L     +++   +  DP KRP A  +VL+
Sbjct: 268 -LIAEATDLISQMIDHDPLKRPTAM-KVLR 295

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 53/279 (18%), Positives = 92/279 (32%), Gaps = 58/279 (20%)

Query: 8   AEEYAKLAREIYRYKHLSHPNIIPIYKTM---------------------ISQRQLFYAE 46
            ++  ++  E+   K L HPNI  +Y+                       ++        
Sbjct: 69  PKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTG 128

Query: 47  IACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH--KETLKGLSYLQGEG 104
              M      I      N  A    I   R           I++  ++    L YL  +G
Sbjct: 129 KCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG 188

Query: 105 LFHKNISAGHILHNIFNDDTRNWI----------------SSSSSITTWA-----AAPEV 143
           + H++I   + L   F+ +    I                     +TT A      APEV
Sbjct: 189 ICHRDIKPENFL---FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEV 245

Query: 144 VNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNED 203
           +N  ++ Y  K D W  G+       G +P     D D ++++L K+    +    PN +
Sbjct: 246 LNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN----PNYN 301

Query: 204 TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
                  LS    +++   L  +  +R  A  + LQ  W
Sbjct: 302 ------VLSPLARDLLSNLLNRNVDERFDAM-RALQHPW 333

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 26/259 (10%), Positives = 68/259 (26%), Gaps = 61/259 (23%)

Query: 10  EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSPAA 68
           E+    + + R K       +  Y   + Q            G+L ++I  Y+       
Sbjct: 110 EFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVM 169

Query: 69  TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWI 128
            Q +             ++ A    L  +  +    + H +I   + +      +  +  
Sbjct: 170 PQGL------------VISFAM-RMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDED 216

Query: 129 SSSSSI--------------------TTWA-----AAPEVVNFGDDYYSCKSDIWLIGIT 163
             S+ +                    T           E+++  +  ++ + D + +  T
Sbjct: 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLS--NKPWNYQIDYFGVAAT 274

Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWN-MVKIC 222
                 G     + +  +   + L +                   R    + WN    + 
Sbjct: 275 VYCMLFGTYMKVKNEGGECKPEGLFR-------------------RLPHLDMWNEFFHVM 315

Query: 223 LAPDPAKRPAAEAQVLQEM 241
           L         +   + Q++
Sbjct: 316 LNIPDCHHLPSLDLLRQKL 334

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 43/253 (16%), Positives = 78/253 (30%), Gaps = 61/253 (24%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSL-D 55
           ++D+    +    + +EI   K L+H N++  Y         +    Y       G L D
Sbjct: 39  IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS----GGELFD 94

Query: 56  SIMTYRPLNSPAA----TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHK--- 108
            I     +  P A     QL+                       G+ YL G G+ H+   
Sbjct: 95  RIEPDIGMPEPDAQRFFHQLM----------------------AGVVYLHGIGITHRDIK 132

Query: 109 --NI---SAGHI------LHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDI 157
             N+      ++      L  +F  + R  + +    T    APE++    ++++   D+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK-RREFHAEPVDV 191

Query: 158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWN 217
           W  GI       G LP           +      +     + P +        L      
Sbjct: 192 WSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEK-KTYLNPWKKIDSAPLALLHKI-- 245

Query: 218 MVKICLAPDPAKR 230
                L  +P+ R
Sbjct: 246 -----LVENPSAR 253

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 42/288 (14%), Positives = 86/288 (29%), Gaps = 85/288 (29%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMI-------GS 53
           +  N + +    + +E+   K LS HPNI+         ++      A  +       G 
Sbjct: 61  LLSNEEEKN-RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQ 119

Query: 54  LDSIMTYRPLNSPAATQLIMSNRHRYGITVD-CLAIAHKETLKGLSYLQGEGLFHKNISA 112
           L   +       P +   ++       I    C A+ H                H+    
Sbjct: 120 LVEFLKKMESRGPLSCDTVLK------IFYQTCRAVQH---------------MHRQKPP 158

Query: 113 GHILH------NIFNDDTRNWI-----SSSS----------------------SITTWA- 138
             I+H      N+   +          S+++                        TT   
Sbjct: 159 --IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMY 216

Query: 139 AAPEVVN-FGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQ 197
             PE+++ + +     K DIW +G           P      L I+         +    
Sbjct: 217 RTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV---------NGKYS 267

Query: 198 VAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR 245
           + P++       T    F ++++  L  +P +R +  A+V+ ++    
Sbjct: 268 IPPHD-------TQYTVFHSLIRAMLQVNPEERLSI-AEVVHQLQEIA 307

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 46/245 (18%), Positives = 80/245 (32%), Gaps = 68/245 (27%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT--------YRPLNSPA 67
            E+   +   H NI+           LF          L +I+T        Y  L++  
Sbjct: 69  NEVGVLRKTRHVNIL-----------LFMG--YSTAPQL-AIVTQWCEGSSLYHHLHASE 114

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNW 127
                   +    I       A     +G+ YL  + + H+++ +    +NIF  +  + 
Sbjct: 115 TK---FEMKKLIDIARQ---TA-----RGMDYLHAKSIIHRDLKS----NNIFLHE--DN 157

Query: 128 I---------------SSSSSITTWAA-----APEVVNFGDDY-YSCKSDIWLIGITALQ 166
                           S S      +      APEV+   D   YS +SD++  GI   +
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
              G LP S   + D + +M+ +   S  L    +           K    ++  CL   
Sbjct: 218 LMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRS--------NCPKRMKRLMAECLKKK 269

Query: 227 PAKRP 231
             +RP
Sbjct: 270 RDERP 274

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 46/260 (17%), Positives = 94/260 (36%), Gaps = 70/260 (26%)

Query: 7   QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSL-DSIMTYR 61
                 KL RE+   K L+HPNI+ +++ + +++ L+    YA      G + D ++ + 
Sbjct: 54  NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYAS----GGEVFDYLVAHG 109

Query: 62  PLNSPAA----TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH 117
            +    A     Q++                        + Y   + + H+++ A     
Sbjct: 110 RMKEKEARSKFRQIV----------------------SAVQYCHQKRIVHRDLKA----E 143

Query: 118 NIFNDDTRN----------WISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGI 162
           N+  D   N            +    +  +      AAPE+   G  Y   + D+W +G+
Sbjct: 144 NLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQ-GKKYDGPEVDVWSLGV 202

Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
                  G LP       ++    L ++      ++            +S +  N++K  
Sbjct: 203 ILYTLVSGSLPF---DGQNLKE--LRERVLRGKYRIPFY---------MSTDCENLLKRF 248

Query: 223 LAPDPAKRPAAEAQVLQEMW 242
           L  +P KR   E Q++++ W
Sbjct: 249 LVLNPIKRGTLE-QIMKDRW 267

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 43/253 (16%), Positives = 78/253 (30%), Gaps = 61/253 (24%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSL-D 55
           ++D+    +    + +EI   K L+H N++  Y         +    Y       G L D
Sbjct: 39  IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS----GGELFD 94

Query: 56  SIMTYRPLNSPAA----TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHK--- 108
            I     +  P A     QL+                       G+ YL G G+ H+   
Sbjct: 95  RIEPDIGMPEPDAQRFFHQLM----------------------AGVVYLHGIGITHRDIK 132

Query: 109 --NI---SAGHI------LHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDI 157
             N+      ++      L  +F  + R  + +    T    APE++    ++++   D+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK-RREFHAEPVDV 191

Query: 158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWN 217
           W  GI       G LP           +      +     + P +        L      
Sbjct: 192 WSCGIVLTAMLAGELPW---DQPSDSCQEYSDWKEK-KTYLNPWKKIDSAPLALLHKI-- 245

Query: 218 MVKICLAPDPAKR 230
                L  +P+ R
Sbjct: 246 -----LVENPSAR 253

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 40/249 (16%), Positives = 81/249 (32%), Gaps = 62/249 (24%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSL-DSIMTYRPLNSPA 67
           +L RE+    HL HPNI+ +Y       +++    YA     +G++   +      +   
Sbjct: 55  QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQR 110

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRN- 126
               I                   E    LSY   + + H++I       N+        
Sbjct: 111 TATYI------------------TELANALSYCHSKRVIHRDIK----PENLLLGSAGEL 148

Query: 127 ------WISSSSSITTWA-------AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
                 W   + S              PE++      +  K D+W +G+   +F  G  P
Sbjct: 149 KIADFGWSVHAPSSRRTDLCGTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPP 206

Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
                  +   ++   +         P+         +++   +++   L  +P++RP  
Sbjct: 207 FEANTYQETYKRISRVEFT------FPD--------FVTEGARDLISRLLKHNPSQRPML 252

Query: 234 EAQVLQEMW 242
             +VL+  W
Sbjct: 253 R-EVLEHPW 260

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 63/257 (24%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSPA 67
           ++ + + RE+   K L HPNI+ +++ +      +        G L D I+  +  +   
Sbjct: 63  KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD 122

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR-- 125
           A ++I                  K+   G++Y+    + H+++   +IL      D    
Sbjct: 123 AARII------------------KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIK 164

Query: 126 -------NWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
                       ++ +          APEV+      Y  K D+W  G+       G  P
Sbjct: 165 IIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT---YDEKCDVWSAGVILYILLSGTPP 221

Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFW--------NMVKICLAP 225
              + + DI+ ++                    G        W        ++++  L  
Sbjct: 222 FYGKNEYDILKRVE------------------TGKYAFDLPQWRTISDDAKDLIRKMLTF 263

Query: 226 DPAKRPAAEAQVLQEMW 242
            P+ R  A  Q L+  W
Sbjct: 264 HPSLRITAT-QCLEHPW 279

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 43/244 (17%), Positives = 85/244 (34%), Gaps = 53/244 (21%)

Query: 12  AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSL-DSIMTYRPLNSPAAT 69
            K+  EI     + H NII +     +Q       E       L   I  +  L+ P A 
Sbjct: 74  GKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLA- 132

Query: 70  QLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL----HNIFNDD-- 123
                  + +           ++ +  + YL+ + + H++I   +I+      I   D  
Sbjct: 133 ------SYIF-----------RQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG 175

Query: 124 TRNWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
           +  ++       T+       APEV+  G+ Y   + ++W +G+T         P     
Sbjct: 176 SAAYLERGKLFYTFCGTIEYCAPEVLM-GNPYRGPELEMWSLGVTLYTLVFEENPF---C 231

Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL 238
           +L+   +  +  P                   +SK   ++V   L P P +R   E +++
Sbjct: 232 ELEETVEAAIHPPY-----------------LVSKELMSLVSGLLQPVPERRTTLE-KLV 273

Query: 239 QEMW 242
            + W
Sbjct: 274 TDPW 277

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 44/284 (15%), Positives = 86/284 (30%), Gaps = 100/284 (35%)

Query: 3   DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA---EIACMI------GS 53
                 E++ +  RE++   +L+HPNI+             Y        M+      G 
Sbjct: 59  GETEMIEKFQEFQREVFIMSNLNHPNIV-----------KLYGLMHNPPRMVMEFVPCGD 107

Query: 54  LDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAG 113
           L   +  +      + +L +            L IA      G+ Y+             
Sbjct: 108 LYHRLLDKAHPIKWSVKLRL-----------MLDIA-----LGIEYM------QNQ--NP 143

Query: 114 HILH------NIFNDDT----------------RNWISSSSSIT---TWAAAPEVVNFGD 148
            I+H      NIF                    +  + S S +     W A PE +   +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMA-PETIGAEE 202

Query: 149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKML-MKQP--KSTSLQVAPNEDTT 205
           + Y+ K+D +   +                   I+  +L  + P  + +  ++       
Sbjct: 203 ESYTEKADTYSFAM-------------------ILYTILTGEGPFDEYSYGKIKFINMIR 243

Query: 206 HGTRTLS------KNFWNMVKICLAPDPAKRPAAE--AQVLQEM 241
                 +          N++++C + DP KRP      + L E+
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 41.8 bits (98), Expect = 9e-05
 Identities = 47/312 (15%), Positives = 85/312 (27%), Gaps = 97/312 (31%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            I + ++     K+ RE+     L HP I+  +   +      + E    I   D    +
Sbjct: 38  RIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDW 97

Query: 61  RPLNSPAATQLIMSNR-------------HRYGITVDCLAI----AHKETLK-------- 95
              +        +  R              +       L I      KE LK        
Sbjct: 98  PLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS 157

Query: 96  ------------------GLSYLQGEGLFH-----KNI---SAGHI----------LHNI 119
                              + +L  +GL H      NI       +          +   
Sbjct: 158 LEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 217

Query: 120 FNDDTRNWISSSSSITTWA------AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
             + T      + +  T         +PE ++   + YS K DI+ +G+           
Sbjct: 218 EEEQTVLTPMPAYATHTGQVGTKLYMSPEQIH--GNNYSHKVDIFSLGL----------- 264

Query: 174 VSRRQDLDIMTKMLMKQPKSTS------LQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
                   I+ ++L     ST       +    N                MV+  L+P P
Sbjct: 265 --------ILFELLY--SFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSP 314

Query: 228 AKRPAAEAQVLQ 239
            +RP A   +++
Sbjct: 315 TERPEA-TDIIE 325

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 38/197 (19%), Positives = 63/197 (31%), Gaps = 63/197 (31%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQL 71
           RE+   K L H NII +   +    +L     YAE       L   M   P  S    + 
Sbjct: 82  REVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-----DLKKYMDKNPDVSMRVIKS 136

Query: 72  IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWIS-- 129
            +                  + + G+++       H+++   ++L ++ +      +   
Sbjct: 137 FL-----------------YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIG 179

Query: 130 ---------------SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
                          +   IT W   PE++  G  +YS   DIW I        C     
Sbjct: 180 DFGLARAFGIPIRQFTHEIITLWYRPPEIL-LGSRHYSTSVDIWSIA-------C----- 226

Query: 175 SRRQDLDIMTKMLMKQP 191
                  I  +MLMK P
Sbjct: 227 -------IWAEMLMKTP 236

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 37/253 (14%), Positives = 76/253 (30%), Gaps = 67/253 (26%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSL-DSIMT-YRPLNSPAA- 68
           ++  E+  +  L HP+I+ +Y        ++   E+ C  G +   +    +P +   A 
Sbjct: 57  RVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM-CHNGEMNRYLKNRVKPFSENEAR 115

Query: 69  ---TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR 125
               Q+I                       G+ YL   G+ H++++      N+      
Sbjct: 116 HFMHQII----------------------TGMLYLHSHGILHRDLTLS----NLLLTRNM 149

Query: 126 N-----------WISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPC 169
           N                    T        +PE+       +  +SD+W +G        
Sbjct: 150 NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT--RSAHGLESDVWSLGCMFYTLLI 207

Query: 170 GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK 229
           G  P        +     + +      ++            LS    +++   L  +PA 
Sbjct: 208 GRPPF---DTDTVKN--TLNKVVLADYEMPSF---------LSIEAKDLIHQLLRRNPAD 253

Query: 230 RPAAEAQVLQEMW 242
           R +    VL   +
Sbjct: 254 RLSLS-SVLDHPF 265

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 45/245 (18%), Positives = 82/245 (33%), Gaps = 73/245 (29%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI------GSLDSIMTYRPLNSPAAT 69
            E  R +  SHPN++P+     S           +I      GSL     Y  L+     
Sbjct: 56  EECPRLRIFSHPNVLPVLGACQSPPAPHP----TLITHWMPYGSL-----YNVLHEGTNF 106

Query: 70  QLIMSNRHRYGITVDCLAIAHKETLKGLSYL--QGEGLFHKNISAGHILHNIFNDDT--- 124
            +           +D   +A     +G+++L      +    +++  ++  I  D T   
Sbjct: 107 VV--DQSQAVKFALD---MA-----RGMAFLHTLEPLIPRHALNSRSVM--IDEDMTARI 154

Query: 125 ------RNWISSSSSITT-WAAAPEVV-NFGDDYYSCKSDIWLIGI-----TALQFPCGG 171
                  ++ S        W  APE +    +D     +D+W   +        + P   
Sbjct: 155 SMADVKFSFQSPGRMYAPAW-VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213

Query: 172 LPVSRRQDLDIMTKMLMKQ-----PKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
           L      +++I  K+ ++      P   S  V+                  ++KIC+  D
Sbjct: 214 LS-----NMEIGMKVALEGLRPTIPPGISPHVS-----------------KLMKICMNED 251

Query: 227 PAKRP 231
           PAKRP
Sbjct: 252 PAKRP 256

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 47/180 (26%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSL-DSIMTYRPLNSPA 67
           +L REI    HL HPNI+ +Y     +++++    +A      G L   +  +   +   
Sbjct: 60  QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAP----RGELYKELQKHGRFDEQR 115

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRN- 126
           +   +                  +E    L Y     + H++I       N+        
Sbjct: 116 SATFM------------------EELADALHYCHERKVIHRDIKP----ENLLMGYKGEL 153

Query: 127 ------WISSSSSITTWA-------AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
                 W   + S+             PE++      +  K D+W  G+   +F  G  P
Sbjct: 154 KIADFGWSVHAPSLRRRTMCGTLDYLPPEMIE--GKTHDEKVDLWCAGVLCYEFLVGMPP 211

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 41/267 (15%), Positives = 77/267 (28%), Gaps = 85/267 (31%)

Query: 5   NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT----- 59
               ++     RE+  Y+   H N++           LF    ACM     +I+T     
Sbjct: 67  RDNEDQLKAFKREVMAYRQTRHENVV-----------LFMG--ACMSPPHLAIITSLCKG 113

Query: 60  ---YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
              Y  +         +       I  +   I      KG+ YL  +G+ HK++ +    
Sbjct: 114 RTLYSVVRDAKIV---LDVNKTRQIAQE---IV-----KGMGYLHAKGILHKDLKS---- 158

Query: 117 HNIFNDD--------------TRNWISSSSSITTWAA------APEVVN-------FGDD 149
            N+F D+                                    APE++            
Sbjct: 159 KNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKL 218

Query: 150 YYSCKSDIWLIGI-----TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDT 204
            +S  SD++ +G       A ++P    P                  ++   Q+      
Sbjct: 219 PFSKHSDVFALGTIWYELHAREWPFKTQP-----------------AEAIIWQMGTGMKP 261

Query: 205 THGTRTLSKNFWNMVKICLAPDPAKRP 231
                 + K   +++  C A +  +RP
Sbjct: 262 NLSQIGMGKEISDILLFCWAFEQEERP 288

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 40/205 (19%), Positives = 68/205 (33%), Gaps = 83/205 (40%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLN-SPAATQ 70
           REI   K L HPNI+ +   + S+R L     +     M   L  ++         +  +
Sbjct: 68  REISLLKELHHPNIVSLIDVIHSERCLTLVFEF-----MEKDLKKVLDENKTGLQDSQIK 122

Query: 71  LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH------NI----- 119
           + +                  + L+G+++       H++     ILH      N+     
Sbjct: 123 IYL-----------------YQLLRGVAHC------HQH----RILHRDLKPQNLLINSD 155

Query: 120 -------------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ 166
                        F    R++  +   +T W  AP+V+  G   YS   DIW IG     
Sbjct: 156 GALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVL-MGSKKYSTSVDIWSIG----- 207

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQP 191
             C            I  +M+  +P
Sbjct: 208 --C------------IFAEMITGKP 218

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 51/238 (21%), Positives = 83/238 (34%), Gaps = 61/238 (25%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSL-DSIMTYRPLNSPA 67
           K+ REI   K   HP+II +Y+ + +    F    Y       G L D I  +  +    
Sbjct: 57  KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS----GGELFDYICKHGRVEEME 112

Query: 68  A----TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL----HNI 119
           A     Q++                        + Y     + H+++   ++L     N 
Sbjct: 113 ARRLFQQIL----------------------SAVDYCHRHMVVHRDLKPENVLLDAHMNA 150

Query: 120 FNDD--TRNWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
              D    N +S    + T       AAPEV++ G  Y   + DIW  G+      CG L
Sbjct: 151 KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS-GRLYAGPEVDIWSCGVILYALLCGTL 209

Query: 173 PVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
           P     D  + T  L K+ +     +            L+++   ++   L  DP KR
Sbjct: 210 PF---DDEHVPT--LFKKIRGGVFYIPEY---------LNRSVATLLMHMLQVDPLKR 253

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 34/175 (19%), Positives = 56/175 (32%), Gaps = 64/175 (36%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLN-SPAATQ 70
           REI   K L H NI+ ++  + S ++L     + +       L         +  P   +
Sbjct: 50  REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-----DLKKYFDSCNGDLDPEIVK 104

Query: 71  LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH------NI----- 119
             +                  + LKGL +       H      ++LH      N+     
Sbjct: 105 SFL-----------------FQLLKGLGFC------HSR----NVLHRDLKPQNLLINRN 137

Query: 120 -------------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIG 161
                        F    R +  S+  +T W   P+V+ FG   YS   D+W  G
Sbjct: 138 GELKLANFGLARAFGIPVRCY--SAEVVTLWYRPPDVL-FGAKLYSTSIDMWSAG 189

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 42/206 (20%), Positives = 67/206 (32%), Gaps = 80/206 (38%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLF----YAE--IACMIGSLDSIMTYRPLNSPAAT 69
           REI   K L H NI+ +Y  + ++ +L     + +  +   + S     T R L      
Sbjct: 52  REISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL-ELNLV 110

Query: 70  QLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH------NI---- 119
           +                     + L+GL++       H+N     ILH      N+    
Sbjct: 111 KYFQ-----------------WQLLQGLAFC------HEN----KILHRDLKPQNLLINK 143

Query: 120 --------------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITAL 165
                         F      +  SS  +T W  AP+V+  G   YS   DIW  G    
Sbjct: 144 RGQLKLGDFGLARAFGIPVNTF--SSEVVTLWYRAPDVL-MGSRTYSTSIDIWSCG---- 196

Query: 166 QFPCGGLPVSRRQDLDIMTKMLMKQP 191
              C            I+ +M+  +P
Sbjct: 197 ---C------------ILAEMITGKP 207

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 48/181 (26%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSL-DSIMTYRPLNSPA 67
           ++ REI   K L HP+II +Y  + +   +     YA      G L D I+  + +    
Sbjct: 55  RVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG-----GELFDYIVEKKRMTEDE 109

Query: 68  A----TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL----HNI 119
                 Q+I                        + Y     + H+++   ++L     N+
Sbjct: 110 GRRFFQQII----------------------CAIEYCHRHKIVHRDLKPENLLLDDNLNV 147

Query: 120 FNDD--TRNWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
              D    N ++  + + T       AAPEV+N G  Y   + D+W  GI       G L
Sbjct: 148 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIN-GKLYAGPEVDVWSCGIVLYVMLVGRL 206

Query: 173 P 173
           P
Sbjct: 207 P 207

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 69/258 (26%)

Query: 12  AKLAREIYRYKHLSHPNIIPIYKTMI--SQRQLF----YAEIACMIGSLDSIMTY---RP 62
           A + +EI   + L H N+I +   +    +++++    Y         +  ++     + 
Sbjct: 51  ANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCV-----CGMQEMLDSVPEKR 105

Query: 63  LNSPAA----TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-- 116
                A     QLI                       GL YL  +G+ HK+I  G++L  
Sbjct: 106 FPVCQAHGYFCQLI----------------------DGLEYLHSQGIVHKDIKPGNLLLT 143

Query: 117 --HNIFNDD-----TRNWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITA 164
               +           +  ++  +  T         PE+ N  D +   K DIW  G+T 
Sbjct: 144 TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTL 203

Query: 165 LQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA 224
                G  P    +  +I    L +     S  + P +              +++K  L 
Sbjct: 204 YNITTGLYPF---EGDNIYK--LFENIGKGSYAI-PGD--------CGPPLSDLLKGMLE 249

Query: 225 PDPAKRPAAEAQVLQEMW 242
            +PAKR +   Q+ Q  W
Sbjct: 250 YEPAKRFSIR-QIRQHSW 266

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 39.4 bits (93), Expect = 5e-04
 Identities = 36/205 (17%), Positives = 62/205 (30%), Gaps = 83/205 (40%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLN-SPAATQ 70
           REI   K L H NI+ +Y  + ++++L     + +       L  ++            +
Sbjct: 49  REISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-----DLKKLLDVCEGGLESVTAK 103

Query: 71  LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH------NI----- 119
             +                  + L G++Y       H       +LH      N+     
Sbjct: 104 SFL-----------------LQLLNGIAYC------HDR----RVLHRDLKPQNLLINRE 136

Query: 120 -------------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ 166
                        F    R +  +   +T W  AP+V+  G   YS   DIW +G     
Sbjct: 137 GELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVL-MGSKKYSTTIDIWSVG----- 188

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQP 191
             C            I  +M+   P
Sbjct: 189 --C------------IFAEMVNGTP 199

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 34/170 (20%)

Query: 7   QAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQL-----FYAEIACMIGSLDSIMTY 60
           Q+E +AK A RE+   KH+ H N+I +         L     FY  +  M   L  +M +
Sbjct: 63  QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH 122

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
             L      Q ++     Y +            LKGL Y+   G+ H+++  G++  N  
Sbjct: 123 EKL-GEDRIQFLV-----YQM------------LKGLRYIHAAGIIHRDLKPGNLAVNED 164

Query: 121 ND----D---TRNWISSSSS--ITTWAAAPEVVNFGDDYYSCKSDIWLIG 161
            +    D    R   S  +   +T W  APEV+      Y+   DIW +G
Sbjct: 165 CELKILDFGLARQADSEMTGYVVTRWYRAPEVI-LNWMRYTQTVDIWSVG 213

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 34/170 (20%)

Query: 7   QAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQL-----FYAEIACMIGSLDSIMTY 60
           Q+  +AK   RE+   KH+ H N+I +       R L      Y     M   L++I+  
Sbjct: 67  QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 126

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
           + L +    Q ++     Y I            L+GL Y+    + H+++   ++  N  
Sbjct: 127 QKL-TDDHVQFLI-----YQI------------LRGLKYIHSADIIHRDLKPSNLAVNED 168

Query: 121 ND----D---TRNWISSSSS--ITTWAAAPEVVNFGDDYYSCKSDIWLIG 161
            +    D    R+     +    T W  APE++     +Y+   DIW +G
Sbjct: 169 CELKILDFGLARHTADEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVG 217

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 39.5 bits (93), Expect = 6e-04
 Identities = 46/268 (17%), Positives = 84/268 (31%), Gaps = 82/268 (30%)

Query: 8   AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSP 66
           A ++ KL RE    + L HPNI+ ++ ++  +   +        G L + I+     +  
Sbjct: 46  ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA 105

Query: 67  AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH------NI- 119
            A+  I                  ++ L+ ++Y       H N     I+H      N+ 
Sbjct: 106 DASHCI------------------QQILESIAYC------HSN----GIVHRNLKPENLL 137

Query: 120 FNDDTRN------------WISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGI 162
                +              ++ S +   +A      +PEV+    D YS   DIW  G+
Sbjct: 138 LASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK--KDPYSKPVDIWACGV 195

Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFW------ 216
                  G  P        +  ++                    G        W      
Sbjct: 196 ILYILLVGYPPFWDEDQHRLYAQIK------------------AGAYDYPSPEWDTVTPE 237

Query: 217 --NMVKICLAPDPAKRPAAEAQVLQEMW 242
             +++   L  +P KR  A+ Q L+  W
Sbjct: 238 AKSLIDSMLTVNPKKRITAD-QALKVPW 264

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 48/248 (19%), Positives = 86/248 (34%), Gaps = 75/248 (30%)

Query: 13  KLAREIYRYKHLSHPNIIPIYKTM--ISQRQLF----YAEIACMIGSLDSIMTYRPLNSP 66
           ++ +EI   K L HPN++ + + +   ++  L+            G +  + T +PL+  
Sbjct: 82  QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQ----GPVMEVPTLKPLSED 137

Query: 67  AAT----QLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNI--------SAGH 114
            A      LI                       G+ YL  + + H++I          GH
Sbjct: 138 QARFYFQDLIK----------------------GIEYLHYQKIIHRDIKPSNLLVGEDGH 175

Query: 115 I------LHNIFNDDTRNWISSSSSITTWA-----AAPEVVNFGDDYYS-CKSDIWLIGI 162
           I      + N F           + ++         APE ++     +S    D+W +G+
Sbjct: 176 IKIADFGVSNEFKGSD-------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGV 228

Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
           T   F  G  P     D  IM   L  + KS +L+     D     + L      + ++ 
Sbjct: 229 TLYCFVFGQCPF---MDERIMC--LHSKIKSQALEFPDQPDIAEDLKDL------ITRM- 276

Query: 223 LAPDPAKR 230
           L  +P  R
Sbjct: 277 LDKNPESR 284

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 37/182 (20%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQ----- 70
           RE+   K L H NII +     +                        +N+   +      
Sbjct: 49  RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPS 108

Query: 71  ------LIM----SNRHR----YGITVDCLAIAHKE-----TLKGLSYLQGEGLFHKNIS 111
                 +IM       H+    +  +   + +           + + ++   G+ H++I 
Sbjct: 109 QNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168

Query: 112 AGHILHNIFNDD--------TRNWISSSSSI----TTWAAAPEVVNFGDDYYSCKSDIWL 159
             ++L N  ++          +  I S  S+    + +  APE++  G   Y+   D+W 
Sbjct: 169 PQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELM-LGATEYTPSIDLWS 227

Query: 160 IG 161
           IG
Sbjct: 228 IG 229

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	245
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.97
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.87
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.61
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.33
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.14
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.67
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.5
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.42
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.38
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.01
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.89
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.85
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.64
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.07
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.55
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	91.71
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	88.3
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	88.22
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	86.06

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.2e-54  Score=343.13  Aligned_cols=203  Identities=22%  Similarity=0.299  Sum_probs=175.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+++|++|+|||||++++++.+++.+|+|||||++|+|.+++.                  ...+++..+..+
T Consensus       114 ~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~------------------~~~l~e~~~~~~  175 (346)
T 4fih_A          114 RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT------------------HTRMNEEQIAAV  175 (346)
T ss_dssp             SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHH------------------HSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH------------------cCCCCHHHHHHH
Confidence            34568899999999999999999999999999999999999999977664                  245899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.||+.||.|||++||+||||||+|||++.        ||+++.....    ...+||+.|||||++.+  ..|+.++||
T Consensus       176 ~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~--~~y~~~~Di  253 (346)
T 4fih_A          176 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR--LPYGPEVDI  253 (346)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTT--CCBCTHHHH
T ss_pred             HHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCC--CCCCcHHHH
Confidence            999999999999999999999999999976        9988765432    35678999999999987  678999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      |||||++|||++|..||.+.+..+.+..+.......           ......+++++.+||.+||+.||++|||++|++
T Consensus       254 WSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~-----------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l  322 (346)
T 4fih_A          254 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR-----------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL  322 (346)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC-----------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC-----------CCccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            999999999999999999987777776665433110           011256899999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +||||.
T Consensus       323 ~Hp~~~  328 (346)
T 4fih_A          323 KHPFLA  328 (346)
T ss_dssp             TCGGGG
T ss_pred             cCHhhc
Confidence            999995

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=5.3e-54  Score=333.08  Aligned_cols=206  Identities=17%  Similarity=0.257  Sum_probs=169.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      .....+.+.+|++++++|+|||||++++++.+    ++.+++||||+++|+|.+++..                 ...++
T Consensus        65 ~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~-----------------~~~l~  127 (290)
T 3fpq_A           65 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-----------------FKVMK  127 (290)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHH-----------------HSSCC
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHh-----------------cCCCC
Confidence            45567889999999999999999999999875    3458999999999999777752                 35689


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCC--cccccCCCCceeccc---------ccCccccccC--CCCccccccccCceecCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEG--LFHKNISAGHILHNI---------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~--ivH~dlkp~nil~~~---------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~  149 (245)
                      +..+..++.||+.||+|||++|  |+||||||+|||++.         ||+++.....  ...+||+.|||||++.+   
T Consensus       128 ~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~---  204 (290)
T 3fpq_A          128 IKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE---  204 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT---
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC---
Confidence            9999999999999999999998  999999999999963         8888644332  24568999999998864   


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      .++.++|||||||++|+|+||+.||.+................           ........++++.++|.+||+.||++
T Consensus       205 ~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~-----------~~~~~~~~~~~~~~li~~~L~~dP~~  273 (290)
T 3fpq_A          205 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK-----------PASFDKVAIPEVKEIIEGCIRQNKDE  273 (290)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-----------CGGGGGCCCHHHHHHHHHHSCSSGGG
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC-----------CCCCCccCCHHHHHHHHHHccCChhH
Confidence            4899999999999999999999999876554443333222110           01112457789999999999999999


Q ss_pred             CccHHHHhhccccc
Q 037274          230 RPAAEAQVLQEMWH  243 (245)
Q Consensus       230 Rpt~~~~l~~~~f~  243 (245)
                      |||++++++||||+
T Consensus       274 R~s~~e~l~Hp~~~  287 (290)
T 3fpq_A          274 RYSIKDLLNHAFFQ  287 (290)
T ss_dssp             SCCHHHHHTSGGGC
T ss_pred             CcCHHHHhcCcccc
Confidence            99999999999996

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.1e-54  Score=342.19  Aligned_cols=207  Identities=16%  Similarity=0.203  Sum_probs=179.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+++|++|+|||||++++++.+++..|+|||||++|+|.+++..               .....+++..+
T Consensus        63 ~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~---------------~~~~~~~e~~~  127 (350)
T 4b9d_A           63 SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA---------------QKGVLFQEDQI  127 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH---------------TTTCCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHH---------------cCCCCCCHHHH
Confidence            455678899999999999999999999999999999999999999999776642               23456789999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.++.||+.||.|||++||+||||||+|||++.        ||+++......    ..+||+.|||||++.+  ..++.+
T Consensus       128 ~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~--~~y~~~  205 (350)
T 4b9d_A          128 LDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICEN--KPYNNK  205 (350)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTT--CCCCHH
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCC--CCCCcH
Confidence            999999999999999999999999999999976        88887654332    3468999999999987  679999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|||||||++|+|++|+.||.+.+..+....+.....       +      ..+..+++++.+||.+||+.||.+|||++
T Consensus       206 ~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-------~------~~~~~~s~~~~~li~~~L~~dP~~R~s~~  272 (350)
T 4b9d_A          206 SDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-------P------PVSLHYSYDLRSLVSQLFKRNPRDRPSVN  272 (350)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-------C------CCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-------C------CCCccCCHHHHHHHHHHccCChhHCcCHH
Confidence            9999999999999999999999887777776655431       1      11256889999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       273 e~l~hp~~~  281 (350)
T 4b9d_A          273 SILEKGFIA  281 (350)
T ss_dssp             HHHTSHHHH
T ss_pred             HHhcCHHhh
Confidence            999999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.6e-54  Score=337.62  Aligned_cols=202  Identities=20%  Similarity=0.275  Sum_probs=176.1

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+++|++|+|||||++++++.+++..|+||||++||+|.+++..                 ...+++..+..
T Consensus        74 ~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~-----------------~~~l~e~~~~~  136 (311)
T 4aw0_A           74 NKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----------------IGSFDETCTRF  136 (311)
T ss_dssp             TCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-----------------HSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHH-----------------cCCCCHHHHHH
Confidence            3467899999999999999999999999999999999999999999777752                 35689999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------CCCCccccccccCceecCCCCCCCch
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ++.||+.||.|||++||+||||||+|||++.        ||+++....      ..+.+||+.|||||++.+  ..++.+
T Consensus       137 ~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~--~~y~~~  214 (311)
T 4aw0_A          137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE--KSACKS  214 (311)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHH--SCBCHH
T ss_pred             HHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcC--CCCCcH
Confidence            9999999999999999999999999999976        998875432      224578999999999987  668999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|||||||++|+|++|+.||.+.+.......+.....     .         .+..+++++.+||.+||+.||++|||++
T Consensus       215 ~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-----~---------~p~~~s~~~~dli~~lL~~dp~~R~t~~  280 (311)
T 4aw0_A          215 SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-----D---------FPEKFFPKARDLVEKLLVLDATKRLGCE  280 (311)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-----C---------CCTTCCHHHHHHHHHHSCSSGGGSTTSG
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----C---------CCcccCHHHHHHHHHHccCCHhHCcChH
Confidence            9999999999999999999999887777777655421     1         1145789999999999999999999998


Q ss_pred             H------Hhhccccc
Q 037274          235 A------QVLQEMWH  243 (245)
Q Consensus       235 ~------~l~~~~f~  243 (245)
                      |      +++||||+
T Consensus       281 e~~~~~~i~~Hp~F~  295 (311)
T 4aw0_A          281 EMEGYGPLKAHPFFE  295 (311)
T ss_dssp             GGTCHHHHHTSGGGT
T ss_pred             HHcCCHHHHCCCCcC
Confidence            7      58999985

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=9.1e-54  Score=329.10  Aligned_cols=203  Identities=17%  Similarity=0.236  Sum_probs=165.2

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|++++++|+|||||++++++.+++..|+||||+ +|+|.+++..                 ...+++..+.
T Consensus        54 ~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~-----------------~~~l~e~~~~  115 (275)
T 3hyh_A           54 SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQ-----------------RDKMSEQEAR  115 (275)
T ss_dssp             --CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHH-----------------SCSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHH-----------------cCCCCHHHHH
Confidence            344667999999999999999999999999999999999999 5688666542                 3569999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      .++.||+.||+|||++||+||||||+|||++.        ||+++.....   .+..||+.|+|||++.+ ...++.++|
T Consensus       116 ~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~-~~y~~~~~D  194 (275)
T 3hyh_A          116 RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISG-KLYAGPEVD  194 (275)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------CTTSCHHHHSS-SSCCCTHHH
T ss_pred             HHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcC-CCCCCChhh
Confidence            99999999999999999999999999999976        8988755433   24678999999999986 333468999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      ||||||++|+|++|+.||.+.+.....+.+.....     .         .+..+|+++.++|.+||+.||++|||++++
T Consensus       195 iwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~-----~---------~p~~~s~~~~~li~~~L~~dP~~R~s~~ei  260 (275)
T 3hyh_A          195 VWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY-----T---------LPKFLSPGAAGLIKRMLIVNPLNRISIHEI  260 (275)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-----C---------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             hHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-----C---------CCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            99999999999999999998777666665544321     1         114578999999999999999999999999


Q ss_pred             hhccccc
Q 037274          237 VLQEMWH  243 (245)
Q Consensus       237 l~~~~f~  243 (245)
                      ++||||+
T Consensus       261 l~hpw~k  267 (275)
T 3hyh_A          261 MQDDWFK  267 (275)
T ss_dssp             HHCHHHH
T ss_pred             HcCcccc
Confidence            9999996

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.7e-53  Score=344.26  Aligned_cols=203  Identities=22%  Similarity=0.299  Sum_probs=176.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+|++|+|||||++++++.+++.+|+|||||+||+|.+++.                  ...+++..+..+
T Consensus       191 ~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~------------------~~~l~e~~~~~~  252 (423)
T 4fie_A          191 RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT------------------HTRMNEEQIAAV  252 (423)
T ss_dssp             SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHH------------------HSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHh------------------ccCCCHHHHHHH
Confidence            34668999999999999999999999999999999999999999977664                  245899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.||+.||.|||++||+||||||+|||++.        ||+++.....    ...+||+.|||||++.+  ..|+.++||
T Consensus       253 ~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~--~~y~~~~Di  330 (423)
T 4fie_A          253 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR--LPYGPEVDI  330 (423)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTT--CCBCTHHHH
T ss_pred             HHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCC--CCCCcHHHH
Confidence            999999999999999999999999999976        9988755432    35678999999999987  679999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      |||||++|+|++|..||.+.+....+..+........           .....+++++.+||.+||+.||.+|||++|++
T Consensus       331 WSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~-----------~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell  399 (423)
T 4fie_A          331 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL-----------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELL  399 (423)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-----------SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCC-----------cccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence            9999999999999999999887777766654431110           11256889999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +||||.
T Consensus       400 ~Hp~~~  405 (423)
T 4fie_A          400 KHPFLA  405 (423)
T ss_dssp             TCGGGG
T ss_pred             cCHHhc
Confidence            999995

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.6e-53  Score=331.89  Aligned_cols=200  Identities=19%  Similarity=0.207  Sum_probs=168.2

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ...+.+|+++|++|+|||||++++++.+++..|+||||++||+|.+++..                 ...+++..+..++
T Consensus        70 ~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-----------------~~~l~e~~~~~~~  132 (304)
T 3ubd_A           70 RVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-----------------EVMFTEEDVKFYL  132 (304)
T ss_dssp             CC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHH-----------------HCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHh-----------------cCCCCHHHHHHHH
Confidence            34688899999999999999999999999999999999999999777752                 3568999999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhhHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .||+.||.|||++||+||||||+|||++.        ||+++....    ....+||+.|||||++.+  ..++.++|||
T Consensus       133 ~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~--~~y~~~~Diw  210 (304)
T 3ubd_A          133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR--RGHTQSADWW  210 (304)
T ss_dssp             HHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHT--SCCCTHHHHH
T ss_pred             HHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhcc--CCCCCCCccc
Confidence            99999999999999999999999999976        888865432    224678999999999987  6789999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----H
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----A  233 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~  233 (245)
                      ||||++|+|++|+.||.+.+..+....+.....       .       .+..+|+++.++|.+||+.||++|||     +
T Consensus       211 SlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-------~-------~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~  276 (304)
T 3ubd_A          211 SFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-------G-------MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV  276 (304)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-------C-------CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTH
T ss_pred             chHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCC-------C-------CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCH
Confidence            999999999999999999888777777654321       1       11558899999999999999999998     5


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      +++++||||+
T Consensus       277 ~eil~Hp~f~  286 (304)
T 3ubd_A          277 EEIKRHSFFS  286 (304)
T ss_dssp             HHHHTSGGGT
T ss_pred             HHHHcCcccc
Confidence            8999999995

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.2e-50  Score=316.36  Aligned_cols=208  Identities=19%  Similarity=0.258  Sum_probs=167.0

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .+.+..+.|.+|+.++++|+|||||+++|++. ++..++|||||++|+|.+++..                .+..+++..
T Consensus        71 ~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~~~l~~----------------~~~~l~~~~  133 (307)
T 3omv_A           71 PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHV----------------QETKFQMFQ  133 (307)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHT----------------SCCCCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCCHHHHHhh----------------cCCCCCHHH
Confidence            45677889999999999999999999999874 5678999999999999777742                135689999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCC-CCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFG-DDY  150 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~-~~~  150 (245)
                      +..++.||+.||+|||+++|+||||||+|||++.        ||+++.....      ....||+.|||||++.+. ...
T Consensus       134 ~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~  213 (307)
T 3omv_A          134 LIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP  213 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCC
Confidence            9999999999999999999999999999999976        9998754322      235689999999999752 245


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      ++.++|||||||++|||+||+.||.+.+................     .   .......+++++.+++.+||+.||++|
T Consensus       214 y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p-----~---~~~~~~~~~~~l~~li~~cl~~dP~~R  285 (307)
T 3omv_A          214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP-----D---LSKLYKNCPKAMKRLVADCVKKVKEER  285 (307)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCC-----C---STTSCTTSCHHHHHHHHHHTCSSSTTS
T ss_pred             CCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC-----C---cccccccchHHHHHHHHHHcCCCHhHC
Confidence            89999999999999999999999988766555544443321110     0   011225688999999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      ||+.++++
T Consensus       286 Ps~~ei~~  293 (307)
T 3omv_A          286 PLFPQILS  293 (307)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99998753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=7.9e-52  Score=326.11  Aligned_cols=199  Identities=20%  Similarity=0.172  Sum_probs=168.2

Q ss_pred             HHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHH
Q 037274           15 AREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETL   94 (245)
Q Consensus        15 ~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~   94 (245)
                      .+|+.++++|+|||||++++++.+++..|+||||+++|+|.++++.                 ...+++..+..++.||+
T Consensus        98 ~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-----------------~~~l~e~~~~~~~~qi~  160 (336)
T 4g3f_A           98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ-----------------MGCLPEDRALYYLGQAL  160 (336)
T ss_dssp             THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH-----------------HSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHH-----------------cCCCCHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999877752                 34689999999999999


Q ss_pred             HHHHHHHhCCcccccCCCCceeccc---------ccCccccccC---------CCCccccccccCceecCCCCCCCchhh
Q 037274           95 KGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS---------SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        95 ~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      .||.|||++||+||||||+|||++.         ||+++.....         ...+||+.|||||++.+  ..++.++|
T Consensus       161 ~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~--~~y~~~~D  238 (336)
T 4g3f_A          161 EGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG--KPCDAKVD  238 (336)
T ss_dssp             HHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTT--CCCCTHHH
T ss_pred             HHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCC--CCCCcHHH
Confidence            9999999999999999999999964         8887654322         13468999999999987  67999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      ||||||++|+|++|+.||.+.+.......+.......           ...+..+++++.++|.+||+.||.+|||+.|+
T Consensus       239 iwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~-----------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el  307 (336)
T 4g3f_A          239 IWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPI-----------REIPPSCAPLTAQAIQEGLRKEPVHRASAMEL  307 (336)
T ss_dssp             HHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGG-----------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCc-----------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence            9999999999999999999877666666555432110           01125688999999999999999999999997


Q ss_pred             -------------hhccccc
Q 037274          237 -------------VLQEMWH  243 (245)
Q Consensus       237 -------------l~~~~f~  243 (245)
                                   ++|||+.
T Consensus       308 ~~~l~~~l~~~~~l~hPw~~  327 (336)
T 4g3f_A          308 RRKVGKALQEVGGLKSPWKG  327 (336)
T ss_dssp             HHHHHHHHHHTTSSCSCSSS
T ss_pred             HHHHHHHHhhhhhccCCCcC
Confidence                         5688874

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1e-50  Score=320.71  Aligned_cols=216  Identities=13%  Similarity=0.241  Sum_probs=170.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +.+..++|.+|+++|++|+|||||+++|++.+++..++||||+++|+|.+++..........  ..........+++..+
T Consensus        83 ~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~--~~~~~~~~~~l~~~~~  160 (329)
T 4aoj_A           83 SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL--AGGEDVAPGPLGLGQL  160 (329)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-------------CCSCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccc--cccccccCCCCCHHHH
Confidence            45667889999999999999999999999999999999999999999999987543221110  0011122456999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.||+.||+|||+++|+||||||+|||++.        ||+++......      ...+|+.|||||.+.+  ..++
T Consensus       161 ~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~--~~~~  238 (329)
T 4aoj_A          161 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY--RKFT  238 (329)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTT--CCCC
T ss_pred             HHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcC--CCCC
Confidence            999999999999999999999999999999986        99887543322      3457999999999987  6699


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|||||||++|||+| |+.||.+.+..+....+....      ..+.       +..+++++.+++.+||+.||++||
T Consensus       239 ~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~------~~~~-------p~~~~~~~~~li~~cl~~dP~~RP  305 (329)
T 4aoj_A          239 TESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR------ELER-------PRACPPEVYAIMRGCWQREPQQRH  305 (329)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC------CCCC-------CTTCCHHHHHHHHHHCCSSTTTSC
T ss_pred             ccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC------CCCC-------cccccHHHHHHHHHHcCcChhHCc
Confidence            99999999999999998 899999887777766665432      1111       156889999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |+++++++
T Consensus       306 s~~ei~~~  313 (329)
T 4aoj_A          306 SIKDVHAR  313 (329)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99998764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=7e-51  Score=318.89  Aligned_cols=217  Identities=16%  Similarity=0.244  Sum_probs=175.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.|.+|+.++++|+|||||+++|++.+++..++||||+++|+|.+++............. ........+++..+
T Consensus        69 ~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~-~~~~~~~~l~~~~~  147 (308)
T 4gt4_A           69 EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD-DDRTVKSALEPPDF  147 (308)
T ss_dssp             CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC------CCEECCCCHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccc-cccccccCCCHHHH
Confidence            34456789999999999999999999999999999999999999999999886432211110000 01112456899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.||+.||+|||+++++||||||+|||++.        ||+++.....      ....||+.|||||.+.+  ..++
T Consensus       148 ~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~--~~~s  225 (308)
T 4gt4_A          148 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY--GKFS  225 (308)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHH--CCCC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhC--CCCC
Confidence            999999999999999999999999999999986        9988754332      23467999999999988  5699


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|||||||++|||+| |..||.+.+..+....+.....      .+.       +..+++++.+++.+||+.||.+||
T Consensus       226 ~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~------~~~-------p~~~~~~~~~li~~C~~~dP~~RP  292 (308)
T 4gt4_A          226 IDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV------LPC-------PDDCPAWVYALMIECWNEFPSRRP  292 (308)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCC------CCC-------CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC------CCC-------cccchHHHHHHHHHHcCCChhHCc
Confidence            99999999999999998 8999999887777666543321      111       256889999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |+.+++++
T Consensus       293 s~~ei~~~  300 (308)
T 4gt4_A          293 RFKDIHSR  300 (308)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999865

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.9e-50  Score=315.17  Aligned_cols=213  Identities=14%  Similarity=0.267  Sum_probs=173.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +.+..++|.+|+++|++|+|||||+++|++.+++..++||||+++|+|.+++.......    ...........+++..+
T Consensus        55 ~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~----~~~~~~~~~~~l~~~~~  130 (299)
T 4asz_A           55 SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDA----VLMAEGNPPTELTQSQM  130 (299)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHH----HHC----CCCCCCHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCccc----ccccccCCCCCCCHHHH
Confidence            45667889999999999999999999999999999999999999999999886421100    00001122457999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.||+.||+|||+++|+||||||+|||++.        ||+++......      ...+|+.|||||.+.+  ..++
T Consensus       131 ~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~--~~~~  208 (299)
T 4asz_A          131 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY--RKFT  208 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHH--CCCC
T ss_pred             HHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcC--CCCC
Confidence            999999999999999999999999999999976        88886443322      2346999999999997  6699


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|||||||++|||+| |+.||.+.+..+....+.....      .+       .+..+++++.+++.+||+.||++||
T Consensus       209 ~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~------~~-------~p~~~~~~~~~li~~cl~~dP~~RP  275 (299)
T 4asz_A          209 TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV------LQ-------RPRTCPQEVYELMLGCWQREPHMRK  275 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCC------CC-------CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC------CC-------CCccchHHHHHHHHHHcCCChhHCc
Confidence            99999999999999998 8999999887777766654331      11       1256889999999999999999999


Q ss_pred             cHHHHhh
Q 037274          232 AAEAQVL  238 (245)
Q Consensus       232 t~~~~l~  238 (245)
                      |++++..
T Consensus       276 s~~~i~~  282 (299)
T 4asz_A          276 NIKGIHT  282 (299)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999853

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.5e-50  Score=314.89  Aligned_cols=210  Identities=18%  Similarity=0.261  Sum_probs=157.5

Q ss_pred             cccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc------------eeEEEeeecccCCHHHHHhcCCCCChhhHH
Q 037274            3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR------------QLFYAEIACMIGSLDSIMTYRPLNSPAATQ   70 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~   70 (245)
                      ++.......+.+.+|+++|++|+|||||++++++.+.+            .+|+|||||++|+|.+++....        
T Consensus        39 ~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~--------  110 (299)
T 4g31_A           39 RLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC--------  110 (299)
T ss_dssp             EECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCC--------
T ss_pred             eccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcC--------
Confidence            34455667788999999999999999999999987644            3799999999999988776321        


Q ss_pred             HHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------------
Q 037274           71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------------  130 (245)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------------  130 (245)
                            .....++..++.++.||+.||+|||++||+||||||+|||++.        ||+++......            
T Consensus       111 ------~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~  184 (299)
T 4g31_A          111 ------TIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY  184 (299)
T ss_dssp             ------SGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-------------------
T ss_pred             ------CCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccc
Confidence                  0122345668899999999999999999999999999999976        88876543321            


Q ss_pred             ----CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCC
Q 037274          131 ----SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTH  206 (245)
Q Consensus       131 ----~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (245)
                          ..+||+.|||||++.+  ..++.++|||||||++|||++   ||....+  ....+......    ..+      .
T Consensus       185 ~~~~~~~GT~~YmAPE~~~~--~~y~~~~DiwSlGvilyell~---Pf~~~~~--~~~~~~~~~~~----~~p------~  247 (299)
T 4g31_A          185 ARHTGQVGTKLYMSPEQIHG--NSYSHKVDIFSLGLILFELLY---PFSTQME--RVRTLTDVRNL----KFP------P  247 (299)
T ss_dssp             -------CCCTTSCHHHHTT--CCCCTHHHHHHHHHHHHHHHS---CCSSHHH--HHHHHHHHHTT----CCC------H
T ss_pred             cccCCcccCccccCHHHHcC--CCCCCHHHHHHHHHHHHHHcc---CCCCccH--HHHHHHHHhcC----CCC------C
Confidence                2468999999999987  679999999999999999996   7765221  11111111100    000      0


Q ss_pred             CcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          207 GTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       207 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .....++...++|.+||+.||.+|||+.++++||||.
T Consensus       248 ~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~  284 (299)
T 4g31_A          248 LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE  284 (299)
T ss_dssp             HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGC
T ss_pred             CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhC
Confidence            1134556788999999999999999999999999985

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-49  Score=320.65  Aligned_cols=218  Identities=16%  Similarity=0.233  Sum_probs=173.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      .....+.+.+|+++|++|+|||||++++++...      +..|+||||++ |+|.+++..                 ...
T Consensus        93 ~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~-----------------~~~  154 (398)
T 4b99_A           93 VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHS-----------------SQP  154 (398)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTS-----------------SSC
T ss_pred             chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHh-----------------cCC
Confidence            345677899999999999999999999987643      56899999997 578666642                 457


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc--------CCCCccccccccCcee
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI--------SSSSSITTWAAAPEVV  144 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~--------~~~~~~~~~y~aPE~~  144 (245)
                      +++..+..++.||+.||.|||++||+||||||+|||++.        ||+++....        ....+||+.|+|||++
T Consensus       155 l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~  234 (398)
T 4b99_A          155 LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM  234 (398)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHh
Confidence            999999999999999999999999999999999999976        888865432        2245789999999998


Q ss_pred             cCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCC--------------CCCC---CCC
Q 037274          145 NFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP--------------NEDT---THG  207 (245)
Q Consensus       145 ~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~---~~~  207 (245)
                      .+ ...++.++||||+||++|+|++|++||.+.+..+.+..+..............              ....   ...
T Consensus       235 ~~-~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (398)
T 4b99_A          235 LS-LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETV  313 (398)
T ss_dssp             TT-CSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHH
T ss_pred             cC-CCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHh
Confidence            75 34579999999999999999999999999888887777765442211110000              0000   001


Q ss_pred             cccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          208 TRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       208 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ....++++.+||.+||..||.+|||++++++||||.
T Consensus       314 ~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~  349 (398)
T 4b99_A          314 YPGADRQALSLLGRMLRFEPSARISAAAALRHPFLA  349 (398)
T ss_dssp             STTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGT
T ss_pred             CCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhC
Confidence            134688999999999999999999999999999995

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=4.6e-49  Score=315.43  Aligned_cols=213  Identities=16%  Similarity=0.232  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ....+.+|+++|+.+ +||||+++++++.+++..|+||||+++|+|.+++.                    .+++.++..
T Consensus        62 ~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~--------------------~l~~~~~~~  121 (361)
T 4f9c_A           62 HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN--------------------SLSFQEVRE  121 (361)
T ss_dssp             CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT--------------------TCCHHHHHH
T ss_pred             CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc--------------------CCCHHHHHH
Confidence            345688999999998 69999999999999999999999999999966553                    378899999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC------------------------------
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS------------------------------  129 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~------------------------------  129 (245)
                      ++.|++.||+|||++||+||||||+|||++.         ||+++.....                              
T Consensus       122 ~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (361)
T 4f9c_A          122 YMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQ  201 (361)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC----------------------
T ss_pred             HHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999864         8887543221                              


Q ss_pred             --CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCC------------C-
Q 037274          130 --SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPK------------S-  193 (245)
Q Consensus       130 --~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~------------~-  193 (245)
                        ...+||+.|+|||++.+ ...++.++||||+||++|+|++|+.||....+ .+.+..+......            . 
T Consensus       202 ~~~~~~GT~~Y~APE~l~~-~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~  280 (361)
T 4f9c_A          202 QVAPRAGTPGFRAPEVLTK-CPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSI  280 (361)
T ss_dssp             ----CCCCGGGCCHHHHTT-CSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEE
T ss_pred             cccccccCccccCHHHHcC-CCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccc
Confidence              13468999999999975 34689999999999999999999999966443 3333333221000            0 


Q ss_pred             --------------------ccCCCC-------CCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          194 --------------------TSLQVA-------PNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       194 --------------------~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                                          .....+       ............++++.+||++||+.||.+|||++|+++||||+
T Consensus       281 ~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~  357 (361)
T 4f9c_A          281 LCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFK  357 (361)
T ss_dssp             EESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGT
T ss_pred             cccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence                                000000       00001112256788999999999999999999999999999995

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.2e-48  Score=309.71  Aligned_cols=220  Identities=16%  Similarity=0.253  Sum_probs=170.6

Q ss_pred             cccHHHHHHHHHHHHHHhhCCC-CCeeeEEEEEEeC-ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            5 NHQAEEYAKLAREIYRYKHLSH-PNIIPIYKTMISQ-RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h-~~Iv~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ....+..+.+.+|+++|++++| ||||+++|+|..+ +.+++|||||++|+|.++++......... ........+..++
T Consensus       105 ~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~-~~~~~~~~~~~l~  183 (353)
T 4ase_A          105 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY-KVAPEDLYKDFLT  183 (353)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC--------CTTCBC
T ss_pred             ccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccc-cccchhhccccCC
Confidence            3445667889999999999976 8999999998664 56899999999999999986432100000 0000111235689


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~  148 (245)
                      +..+..++.||+.||+|||+++|+||||||+|||++.        ||+++......      ...+|+.|||||.+.+  
T Consensus       184 ~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~--  261 (353)
T 4ase_A          184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--  261 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhc--
Confidence            9999999999999999999999999999999999976        99987554332      3356899999999997  


Q ss_pred             CCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++|||||||++|||+| |..||.+...............     ..+.       +..+++++.+++.+||+.||
T Consensus       262 ~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~-----~~~~-------p~~~~~~~~~li~~c~~~dP  329 (353)
T 4ase_A          262 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-----RMRA-------PDYTTPEMYQTMLDCWHGEP  329 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC-----CCCC-------CTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCC-----CCCC-------CccCCHHHHHHHHHHcCcCh
Confidence            669999999999999999998 8999988665444433333221     1111       15578999999999999999


Q ss_pred             CCCccHHHHhhc
Q 037274          228 AKRPAAEAQVLQ  239 (245)
Q Consensus       228 ~~Rpt~~~~l~~  239 (245)
                      .+|||+.++++|
T Consensus       330 ~~RPt~~eil~~  341 (353)
T 4ase_A          330 SQRPTFSELVEH  341 (353)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999886

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5e-48  Score=326.37  Aligned_cols=209  Identities=15%  Similarity=0.177  Sum_probs=178.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+++|++|+|||||++++++.+++.+++||||++||+|.+++..                ....+++..+
T Consensus       194 ~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~----------------~~~~l~e~~~  257 (573)
T 3uto_A          194 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD----------------EHNKMSEDEA  257 (573)
T ss_dssp             SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTC----------------TTSCEEHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHH----------------hCCCCCHHHH
Confidence            345677899999999999999999999999999999999999999999776642                1346899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccCC---CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ..++.||+.||.|||++||+||||||+|||++.          ||+++......   ..+||+.|+|||++.+  ..++.
T Consensus       258 ~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~--~~y~~  335 (573)
T 3uto_A          258 VEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG--KPVGY  335 (573)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTT--CCBCH
T ss_pred             HHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCC--CCCCc
Confidence            999999999999999999999999999999863          88887654433   3568999999999987  67899


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++|||||||++|+|++|..||.+.+..+.+..+.......          .......+++++.+||.+||+.||.+|||+
T Consensus       336 ~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~----------~~~~~~~~s~~~~dli~~~L~~dp~~R~t~  405 (573)
T 3uto_A          336 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM----------DDSAFSGISEDGKDFIRKLLLADPNTRMTI  405 (573)
T ss_dssp             HHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC----------CSGGGTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCC----------CcccccCCCHHHHHHHHHHccCChhHCcCH
Confidence            9999999999999999999999988877777665433111          011125688999999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      +++++||||.
T Consensus       406 ~e~l~Hpw~~  415 (573)
T 3uto_A          406 HQALEHPWLT  415 (573)
T ss_dssp             HHHHHSTTTS
T ss_pred             HHHhcCcCcC
Confidence            9999999986

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.5e-47  Score=322.99  Aligned_cols=199  Identities=15%  Similarity=0.101  Sum_probs=164.7

Q ss_pred             HHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHH
Q 037274           13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKE   92 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q   92 (245)
                      ....++.+++.++|||||+++++|.+++.+|+||||++||+|.+++..                 ...+++..+..++.|
T Consensus       238 ~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~-----------------~~~l~E~~a~~y~~q  300 (689)
T 3v5w_A          238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-----------------HGVFSEADMRFYAAE  300 (689)
T ss_dssp             HHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-----------------HCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHh-----------------cCCCCHHHHHHHHHH
Confidence            334456777888999999999999999999999999999999776652                 356999999999999


Q ss_pred             HHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC--CCCccccccccCceecCCCCCCCchhhHHHHHH
Q 037274           93 TLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGI  162 (245)
Q Consensus        93 i~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~  162 (245)
                      |+.||.|||++||+||||||+|||++.        ||+++.....  .+.+||+.|||||++.. ...++.++|+|||||
T Consensus       301 Il~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~-~~~y~~~vDiWSLGv  379 (689)
T 3v5w_A          301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK-GVAYDSSADWFSLGC  379 (689)
T ss_dssp             HHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHST-TCCCCTHHHHHHHHH
T ss_pred             HHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhC-CCCCCcHHHHHHHHH
Confidence            999999999999999999999999976        9988755433  35688999999999964 256899999999999


Q ss_pred             HHHHHhhCCCCCCCCCchHH---HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----HH
Q 037274          163 TALQFPCGGLPVSRRQDLDI---MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----AE  234 (245)
Q Consensus       163 ~l~~~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~  234 (245)
                      ++|+|++|.+||.+.+..+.   ...+....       .       ..+..+|+++.+||.+||+.||.+|++     ++
T Consensus       380 ilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~-------~-------~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~  445 (689)
T 3v5w_A          380 MLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-------V-------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQ  445 (689)
T ss_dssp             HHHHHHHSSCTTCGGGCCCHHHHHHHHHHCC-------C-------CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHH
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhhcCCC-------C-------CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHH
Confidence            99999999999986443322   22222111       1       112568999999999999999999998     79


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||+
T Consensus       446 ei~~HpfF~  454 (689)
T 3v5w_A          446 EVKESPFFR  454 (689)
T ss_dssp             HHTTSGGGT
T ss_pred             HHhcCcccc
Confidence            999999995

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=9.2e-46  Score=290.27  Aligned_cols=210  Identities=20%  Similarity=0.182  Sum_probs=152.4

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ...........|+..+.+++|||||++++++..++    .+++||||+++|+|.++++                  ...+
T Consensus        36 ~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~------------------~~~l   97 (303)
T 3hmm_A           36 SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------------------RYTV   97 (303)
T ss_dssp             GGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHH------------------HCCB
T ss_pred             ccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHH------------------hCCC
Confidence            33334444556777778899999999999997654    5799999999999987775                  2458


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhC--------CcccccCCCCceeccc--------ccCccccccCC--------CCccccc
Q 037274           82 TVDCLAIAHKETLKGLSYLQGE--------GLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTW  137 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~--------~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~  137 (245)
                      ++..+..++.|++.||+|||++        +|+||||||+|||++.        ||+++......        ...||+.
T Consensus        98 ~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~  177 (303)
T 3hmm_A           98 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR  177 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeeccccccccc
Confidence            8899999999999999999987        8999999999999976        99876544322        2467999


Q ss_pred             cccCceecCCC----CCCCchhhHHHHHHHHHHHhhCCCCCCCCCch--------------HHHHHHHhcCCCCccCCCC
Q 037274          138 AAAPEVVNFGD----DYYSCKSDIWLIGITALQFPCGGLPVSRRQDL--------------DIMTKMLMKQPKSTSLQVA  199 (245)
Q Consensus       138 y~aPE~~~~~~----~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~--------------~~~~~~~~~~~~~~~~~~~  199 (245)
                      |||||++.+..    ..++.++|||||||++|||+||..||......              ..........  ......+
T Consensus       178 ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~rp~~p  255 (303)
T 3hmm_A          178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ--KLRPNIP  255 (303)
T ss_dssp             GCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS--CCCCCCC
T ss_pred             ccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcc--cCCCCCC
Confidence            99999997521    13678999999999999999998766432211              1111111111  0000110


Q ss_pred             CCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          200 PNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                          ........+..+.+++.+||+.||++|||+.++++.
T Consensus       256 ----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          256 ----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             ----GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             ----ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                011113345678999999999999999999998763

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2e-44  Score=286.20  Aligned_cols=205  Identities=18%  Similarity=0.273  Sum_probs=173.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|++++++++||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+
T Consensus        54 ~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~l~~~~~  116 (328)
T 3fe3_A           54 NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-----------------HGRMKEKEA  116 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHH-----------------HCCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHH-----------------cCCCCHHHH
Confidence            456678899999999999999999999999999999999999999999776642                 245889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchh
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ..++.|++.||.|||++|++||||||+||+++.        ||++......   ....+|+.|+|||.+.+ ....+.++
T Consensus       117 ~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~  195 (328)
T 3fe3_A          117 RSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQG-KKYDGPEV  195 (328)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHT-CCCCSHHH
T ss_pred             HHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCcccccC-CCcCCchh
Confidence            999999999999999999999999999999976        7777544322   24567999999999986 23345899


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||||++|+|++|..||.+.+.......+.....     .         .+...++++.+++.+||+.||.+|||+++
T Consensus       196 DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~---------~p~~~s~~~~~li~~~L~~dP~~R~t~~e  261 (328)
T 3fe3_A          196 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-----R---------IPFYMSTDCENLLKRFLVLNPIKRGTLEQ  261 (328)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----C---------CCTTSCHHHHHHHHHHCCSSTTTSCCHHH
T ss_pred             hhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----C---------CCCCCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            999999999999999999998777666665554321     1         11457899999999999999999999999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||.
T Consensus       262 il~h~~~~  269 (328)
T 3fe3_A          262 IMKDRWIN  269 (328)
T ss_dssp             HTTCTTTT
T ss_pred             HhcCHhhc
Confidence            99999985

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=3.8e-44  Score=294.84  Aligned_cols=208  Identities=17%  Similarity=0.171  Sum_probs=176.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|++++++++||||+++++++.+++..++||||+++|+|.+.+..                 ...+++..+
T Consensus        50 ~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~-----------------~~~~~e~~~  112 (444)
T 3soa_A           50 SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA-----------------REYYSEADA  112 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHH-----------------CSCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHH-----------------cCCCCHHHH
Confidence            345677899999999999999999999999999999999999999999766642                 356899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC----CCccccccccCceecCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ..++.||+.||.|||++|++||||||+|||++.           ||++.......    ...||+.|+|||.+.+  ..+
T Consensus       113 ~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~~  190 (444)
T 3soa_A          113 SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK--DPY  190 (444)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTT--CCB
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcC--CCC
Confidence            999999999999999999999999999999972           88776544332    3467999999999986  568


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|||||||++|+|++|..||.+.+.......+........     .     .....+++++.++|.+||+.||.+||
T Consensus       191 ~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~-----~-----~~~~~~s~~~~~li~~~L~~dP~~Rp  260 (444)
T 3soa_A          191 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFP-----S-----PEWDTVTPEAKDLINKMLTINPSKRI  260 (444)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC-----T-----TTTTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred             CCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCC-----c-----cccccCCHHHHHHHHHHcCCChhHCC
Confidence            9999999999999999999999998877777666654432111     1     11146789999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      |+.++++||||.
T Consensus       261 ta~e~L~hp~~~  272 (444)
T 3soa_A          261 TAAEALKHPWIS  272 (444)
T ss_dssp             CHHHHHHSCTTH
T ss_pred             CHHHHhcCcccc
Confidence            999999999985

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=3.4e-44  Score=281.59  Aligned_cols=204  Identities=23%  Similarity=0.325  Sum_probs=172.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++..++..++||||+++|+|.+++..                  ..+++..+..+
T Consensus        60 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~------------------~~~~~~~~~~~  121 (297)
T 3fxz_A           60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE------------------TCMDEGQIAAV  121 (297)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH------------------SCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh------------------cCCCHHHHHHH
Confidence            356789999999999999999999999999999999999999999777652                  35888999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||++|++||||||+||+++.        ||.+......    ....+|+.|+|||.+.+  ..++.++||
T Consensus       122 ~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di  199 (297)
T 3fxz_A          122 CRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--KAYGPKVDI  199 (297)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHC--SCBCTHHHH
T ss_pred             HHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcC--CCCCcHHHH
Confidence            999999999999999999999999999975        7766543322    23467999999999987  668999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|+|++|..||...+................           ..+..+++.+.+++.+||+.||.+|||+++++
T Consensus       200 wslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell  268 (297)
T 3fxz_A          200 WSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL-----------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELL  268 (297)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC-----------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-----------CCccccCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            9999999999999999988776655554443321111           11256889999999999999999999999999


Q ss_pred             hcccccc
Q 037274          238 LQEMWHF  244 (245)
Q Consensus       238 ~~~~f~~  244 (245)
                      +||||+.
T Consensus       269 ~h~~~~~  275 (297)
T 3fxz_A          269 QHQFLKI  275 (297)
T ss_dssp             TCGGGGG
T ss_pred             hChhhcc
Confidence            9999974

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=3.8e-44  Score=287.90  Aligned_cols=205  Identities=16%  Similarity=0.195  Sum_probs=172.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+..+
T Consensus        58 ~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~-----------------~~~l~~~~~~~i  120 (361)
T 2yab_A           58 CREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ-----------------KESLSEEEATSF  120 (361)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTT-----------------CSCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHh-----------------cCCCCHHHHHHH
Confidence            357899999999999999999999999999999999999999999776642                 356899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc------------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.||+.||.|||+.|++||||||+||+++.            ||++......   ....||+.|+|||.+.+  ..++.+
T Consensus       121 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  198 (361)
T 2yab_A          121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY--EPLGLE  198 (361)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTT--CCCCTH
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcC--CCCCcc
Confidence            999999999999999999999999999854            6666544332   24567999999999987  568999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||.+.+..+....+.......          .......+++.+.++|.+||..||.+|||++
T Consensus       199 ~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~  268 (361)
T 2yab_A          199 ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF----------DEEFFSQTSELAKDFIRKLLVKETRKRLTIQ  268 (361)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC----------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC----------CchhccCCCHHHHHHHHHHCCCChhHCcCHH
Confidence            999999999999999999999877776666554332110          0011145788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       269 e~l~hp~~~  277 (361)
T 2yab_A          269 EALRHPWIT  277 (361)
T ss_dssp             HHHTSTTTS
T ss_pred             HHhcCcCcC
Confidence            999999995

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.2e-43  Score=285.50  Aligned_cols=208  Identities=19%  Similarity=0.221  Sum_probs=174.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++|+||||+++++++.+++..++||||+++|+|.+.+..                 ...+++..+
T Consensus        68 ~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-----------------~~~~~~~~~  130 (362)
T 2bdw_A           68 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-----------------REFYSEADA  130 (362)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT-----------------CSCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHH-----------------cCCCCHHHH
Confidence            445678899999999999999999999999999999999999999999766642                 346889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.||+.||.|||++|++||||||+||+++.           ||++.......   ...+|+.|+|||.+.+  ..++
T Consensus       131 ~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~  208 (362)
T 2bdw_A          131 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK--DPYS  208 (362)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTT--CCCC
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHcc--CCCC
Confidence            999999999999999999999999999999853           77765544322   3467999999999986  5689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++|||||||++|+|++|..||.+.+.......+.......     +.     .....+++++.++|.+||+.||.+|||
T Consensus       209 ~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~-----~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t  278 (362)
T 2bdw_A          209 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY-----PS-----PEWDTVTPEAKSLIDSMLTVNPKKRIT  278 (362)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-----CT-----TGGGGSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC-----Cc-----ccccCCCHHHHHHHHHHcCCChhhCcC
Confidence            99999999999999999999999877666665554432111     10     111467899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      +.++++||||.
T Consensus       279 ~~e~l~hp~~~  289 (362)
T 2bdw_A          279 ADQALKVPWIC  289 (362)
T ss_dssp             HHHHTTSHHHH
T ss_pred             HHHHhcCcccC
Confidence            99999999985

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-44  Score=285.63  Aligned_cols=209  Identities=14%  Similarity=0.151  Sum_probs=174.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+|.+++..                ....+++..+
T Consensus        41 ~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~----------------~~~~~~~~~~  104 (321)
T 1tki_A           41 KGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT----------------SAFELNEREI  104 (321)
T ss_dssp             CTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTS----------------SSCCCCHHHH
T ss_pred             CcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHh----------------cCCCCCHHHH
Confidence            345667799999999999999999999999999999999999999999776642                1346899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccCC---CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +.++.|++.||.|||+.|++||||||+||+++.          ||.+.......   ...+|+.|+|||.+.+  ..++.
T Consensus       105 ~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~  182 (321)
T 1tki_A          105 VSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH--DVVST  182 (321)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTT--CEECH
T ss_pred             HHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcC--CCCCc
Confidence            999999999999999999999999999999873          77665443222   2346899999999986  56899


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++||||||+++|+|++|..||...+.......+........          ......+++++.+++.+||..||.+|||+
T Consensus       183 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~  252 (321)
T 1tki_A          183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD----------EEAFKEISIEAMDFVDRLLVKERKSRMTA  252 (321)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----------HHHHTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCC----------hhhhccCCHHHHHHHHHHcCCChhHCcCH
Confidence            99999999999999999999998877776666654432110          01114578999999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      .++++||||.
T Consensus       253 ~e~l~hp~~~  262 (321)
T 1tki_A          253 SEALQHPWLK  262 (321)
T ss_dssp             HHHHHSHHHH
T ss_pred             HHHhcChhhc
Confidence            9999999985

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=2.3e-43  Score=280.99  Aligned_cols=201  Identities=19%  Similarity=0.240  Sum_probs=171.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+.+..++||||+++|+|.+++..                 ...+++..++.+
T Consensus        48 ~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~~~~~~~~~~  110 (337)
T 1o6l_A           48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-----------------ERVFTEERARFY  110 (337)
T ss_dssp             CHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHh-----------------cCCCCHHHHHHH
Confidence            456789999999999999999999999999999999999999999766642                 346889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.||+.||.|||++|++||||||+||+++.        ||+++....    .....||+.|+|||.+.+  ..++.++|+
T Consensus       111 ~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di  188 (337)
T 1o6l_A          111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED--NDYGRAVDW  188 (337)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSS--SCBCTTHHH
T ss_pred             HHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcC--CCCCchhhc
Confidence            999999999999999999999999999975        777764322    224567999999999987  568999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----c
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----A  232 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t  232 (245)
                      |||||++|+|++|..||.+.+.......+.....     .         .+..+++++.++|.+||+.||.+||     +
T Consensus       189 wslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-----~---------~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~  254 (337)
T 1o6l_A          189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-----R---------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD  254 (337)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----C---------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTT
T ss_pred             ccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-----C---------CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCC
Confidence            9999999999999999998776666655544321     1         1145789999999999999999999     8


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       255 ~~ei~~h~~f~  265 (337)
T 1o6l_A          255 AKEVMEHRFFL  265 (337)
T ss_dssp             HHHHHTSGGGT
T ss_pred             HHHHHcCCCcC
Confidence            99999999995

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.4e-43  Score=280.19  Aligned_cols=205  Identities=18%  Similarity=0.224  Sum_probs=171.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++.+++..++||||+++++|.+++..                 ...+++..+..+
T Consensus        57 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~i  119 (326)
T 2y0a_A           57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-----------------KESLTEEEATEF  119 (326)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTT-----------------SSCCBHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHh-----------------cCCcCHHHHHHH
Confidence            467899999999999999999999999999999999999999999777642                 356899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc------------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.|++.||.|||+.|++|+||||+||+++.            ||.+......   ....+|+.|+|||.+.+  ..++.+
T Consensus       120 ~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  197 (326)
T 2y0a_A          120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY--EPLGLE  197 (326)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTT--CCCCTH
T ss_pred             HHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecC--CCCCcH
Confidence            999999999999999999999999999854            6666544322   23457999999999986  568999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||.+.........+.......          ........+..+.++|.+||+.||.+|||++
T Consensus       198 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  267 (326)
T 2y0a_A          198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF----------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQ  267 (326)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCC----------CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             HHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCc----------CccccccCCHHHHHHHHHHccCChhhCCCHH
Confidence            999999999999999999999877666655544332110          0011145788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       268 e~l~hp~~~  276 (326)
T 2y0a_A          268 DSLQHPWIK  276 (326)
T ss_dssp             HHHHSTTTS
T ss_pred             HHhcCCCcc
Confidence            999999995

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=3.1e-43  Score=286.00  Aligned_cols=221  Identities=24%  Similarity=0.349  Sum_probs=168.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+.++++++||||+++++++.+++..++||||+++|+|.+++..               .....+++..+.
T Consensus        67 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------~~~~~~~~~~~~  131 (389)
T 3gni_B           67 NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT---------------HFMDGMNELAIA  131 (389)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH---------------TCTTCCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhh---------------hcccCCCHHHHH
Confidence            45678899999999999999999999999999999999999999999776652               223568999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc-----------cCCCCccccccccCceecCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW-----------ISSSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~  148 (245)
                      .++.||+.||.|||++|++||||||+|||++.        ||.+....           ......+|+.|+|||.+.++.
T Consensus       132 ~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  211 (389)
T 3gni_B          132 YILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNL  211 (389)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTS
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccC
Confidence            99999999999999999999999999999985        55433221           111235688999999998643


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC----------------------------CCC-
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL----------------------------QVA-  199 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~-  199 (245)
                      ..++.++|||||||++|+|++|..||.+.+..................                            ... 
T Consensus       212 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (389)
T 3gni_B          212 QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPR  291 (389)
T ss_dssp             SCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------------------------------------
T ss_pred             CCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccc
Confidence            568999999999999999999999998766555443322211100000                            000 


Q ss_pred             ---CCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          200 ---PNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       200 ---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                         ...........+++++.++|.+||+.||.+|||++++++||||.
T Consensus       292 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~  338 (389)
T 3gni_B          292 PSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK  338 (389)
T ss_dssp             --------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred             cccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence               00000112355788999999999999999999999999999996

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=5.9e-43  Score=276.66  Aligned_cols=201  Identities=18%  Similarity=0.188  Sum_probs=173.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+|.+++..                 ...+++..+..+
T Consensus        49 ~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-----------------~~~~~~~~~~~~  111 (318)
T 1fot_A           49 QVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK-----------------SQRFPNPVAKFY  111 (318)
T ss_dssp             CHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-----------------TSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHH-----------------cCCCCHHHHHHH
Confidence            456788999999999999999999999999999999999999999777652                 345889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-CCCccccccccCceecCCCCCCCchhhHHHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      +.||+.||.|||++|++||||||+||+++.        ||++...... ....||+.|+|||.+.+  ..++.++|+|||
T Consensus       112 ~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Diwsl  189 (318)
T 1fot_A          112 AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVST--KPYNKSIDWWSF  189 (318)
T ss_dssp             HHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTT--CCBCTTHHHHHH
T ss_pred             HHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccccCHhHhcC--CCCCcccchhhh
Confidence            999999999999999999999999999975        7777654332 24567999999999987  668999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----cHHH
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----AAEA  235 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~  235 (245)
                      ||++|+|++|..||...+.......+.....     .         .+..+++++.++|.+||..||.+||     ++++
T Consensus       190 G~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----~---------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~  255 (318)
T 1fot_A          190 GILIYEMLAGYTPFYDSNTMKTYEKILNAEL-----R---------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTED  255 (318)
T ss_dssp             HHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC-----C---------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHH
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----C---------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHH
Confidence            9999999999999998777776666654321     1         1145789999999999999999999     8999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||+
T Consensus       256 i~~hp~f~  263 (318)
T 1fot_A          256 VKNHPWFK  263 (318)
T ss_dssp             HHTSGGGS
T ss_pred             HhcCcccc
Confidence            99999995

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=6.1e-43  Score=283.22  Aligned_cols=208  Identities=17%  Similarity=0.228  Sum_probs=173.7

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ......+.+|+.++++++||||+++++++.+++..++||||+.+|+|.+++..                ....+++..+.
T Consensus        89 ~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~----------------~~~~l~~~~~~  152 (387)
T 1kob_A           89 PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA----------------EDYKMSEAEVI  152 (387)
T ss_dssp             HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTC----------------TTCCBCHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHh----------------hcCCCCHHHHH
Confidence            34566899999999999999999999999999999999999999999776642                13468999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccCC---CCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.||+.||.|||++|++||||||+||+++.          ||++.......   ...+|+.|+|||.+.+  ..++.+
T Consensus       153 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  230 (387)
T 1kob_A          153 NYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR--EPVGFY  230 (387)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTT--CCBCHH
T ss_pred             HHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccC--CCCCCc
Confidence            99999999999999999999999999999952          77766543322   2356999999999987  668999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|||||||++|+|++|..||.+.+.......+.......     .     ......+++++.++|.+||+.||.+|||++
T Consensus       231 ~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~-----~-----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~  300 (387)
T 1kob_A          231 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF-----D-----EDAFSSVSPEAKDFIKNLLQKEPRKRLTVH  300 (387)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCC-----C-----SSTTTTSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             ccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----C-----ccccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence            999999999999999999999877766666554432110     0     011146789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       301 ell~hp~~~  309 (387)
T 1kob_A          301 DALEHPWLK  309 (387)
T ss_dssp             HHHTSTTTS
T ss_pred             HHhhCcccc
Confidence            999999985

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2e-43  Score=283.03  Aligned_cols=202  Identities=15%  Similarity=0.236  Sum_probs=171.0

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+.+.+|+.+++.+ +||||+++++++.+++..++||||+++|+|.+++..                 ...+++..++
T Consensus        65 ~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~~~~~~~~  127 (353)
T 3txo_A           65 DDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK-----------------SRRFDEARAR  127 (353)
T ss_dssp             TTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-----------------HSSCCHHHHH
T ss_pred             hHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHHHH
Confidence            3556788999999988 699999999999999999999999999999776642                 3468999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.||+.||.|||++||+||||||+|||++.        ||+++....    ....+||+.|+|||.+.+  ..++.++
T Consensus       128 ~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  205 (353)
T 3txo_A          128 FYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQE--MLYGPAV  205 (353)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHH--HHCTTHH
T ss_pred             HHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCC--CCcCCcc
Confidence            99999999999999999999999999999976        777664322    224567999999999987  5689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH--
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA--  233 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~--  233 (245)
                      |+|||||++|+|++|..||.+.+..+....+.....       .       .+..+++.+.++|.+||+.||.+||++  
T Consensus       206 DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-------~-------~p~~~~~~~~~li~~lL~~dP~~R~~~~~  271 (353)
T 3txo_A          206 DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-------V-------YPTWLHEDATGILKSFMTKNPTMRLGSLT  271 (353)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-------C-------CCTTSCHHHHHHHHHHTCSSGGGSTTSGG
T ss_pred             CCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-------C-------CCCCCCHHHHHHHHHHhhhCHHHccCCcc
Confidence            999999999999999999999887777777665431       0       114478999999999999999999998  


Q ss_pred             ----HHHhhccccc
Q 037274          234 ----EAQVLQEMWH  243 (245)
Q Consensus       234 ----~~~l~~~~f~  243 (245)
                          +++++||||+
T Consensus       272 ~~~~~~il~hp~f~  285 (353)
T 3txo_A          272 QGGEHAILRHPFFK  285 (353)
T ss_dssp             GTCTHHHHTSGGGT
T ss_pred             cCCHHHHhhCCccc
Confidence                8999999996

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=4e-43  Score=277.89  Aligned_cols=222  Identities=20%  Similarity=0.288  Sum_probs=172.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.++++++||||+++++++.+++..++||||++ |+|.+++...           ........+++..+..
T Consensus        45 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-----------~~~~~~~~~~~~~~~~  112 (317)
T 2pmi_A           45 GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSR-----------TVGNTPRGLELNLVKY  112 (317)
T ss_dssp             CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHH-----------HSSSCCCCCCHHHHHH
T ss_pred             ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhc-----------cccccccCCCHHHHHH
Confidence            345678899999999999999999999999999999999998 5997777521           1111234588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||++|++||||||+||+++.        ||.+......    ....+|+.|+|||.+.+ ...++.++|
T Consensus       113 ~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~D  191 (317)
T 2pmi_A          113 FQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG-SRTYSTSID  191 (317)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTT-CCCCCTHHH
T ss_pred             HHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhC-CCCCCcHHH
Confidence            9999999999999999999999999999976        7776544322    23456999999999875 345899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCC-------------CCC--CCC-----CCCCcccccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQ-------------VAP--NED-----TTHGTRTLSKNFW  216 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~--~~~-----~~~~~~~~~~~~~  216 (245)
                      ||||||++|+|++|..||.+.+..+....+...........             ...  +..     .......+++++.
T Consensus       192 iwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  271 (317)
T 2pmi_A          192 IWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLM  271 (317)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHH
Confidence            99999999999999999998877776666544321110000             000  000     0011235788999


Q ss_pred             HHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          217 NMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       217 ~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++|.+||+.||.+|||++++++||||.
T Consensus       272 ~li~~~L~~dP~~Rpt~~e~l~hp~f~  298 (317)
T 2pmi_A          272 DFLHGLLQLNPDMRLSAKQALHHPWFA  298 (317)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTTSGGGG
T ss_pred             HHHHHHCCCCcccCCCHHHHhCChhhh
Confidence            999999999999999999999999986

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.6e-42  Score=274.82  Aligned_cols=203  Identities=21%  Similarity=0.352  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.                  ...+++..+..+
T Consensus        85 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~------------------~~~l~~~~~~~i  146 (321)
T 2c30_A           85 RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS------------------QVRLNEEQIATV  146 (321)
T ss_dssp             SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT------------------TCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH------------------hcCCCHHHHHHH
Confidence            45678999999999999999999999999999999999999999977664                  245889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||+.|++|+||||+||+++.        ||.+......    ....+|+.|+|||.+.+  ..++.++||
T Consensus       147 ~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv  224 (321)
T 2c30_A          147 CEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISR--SLYATEVDI  224 (321)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTT--CCBCTHHHH
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcC--CCCCchhhH
Confidence            999999999999999999999999999985        7766544322    23467999999999987  568999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|+|++|..||...........+.......           ......+++.+.+++.+||+.||.+|||+++++
T Consensus       225 ~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  293 (321)
T 2c30_A          225 WSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK-----------LKNSHKVSPVLRDFLERMLVRDPQERATAQELL  293 (321)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC-----------CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-----------cCccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            999999999999999999877666655544332110           011256788999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +||||.
T Consensus       294 ~hp~~~  299 (321)
T 2c30_A          294 DHPFLL  299 (321)
T ss_dssp             TSGGGG
T ss_pred             cChhhc
Confidence            999985

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.4e-43  Score=279.72  Aligned_cols=208  Identities=17%  Similarity=0.218  Sum_probs=165.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.++++++||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+
T Consensus        45 ~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~  107 (323)
T 3tki_A           45 AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-----------------DIGMPEPDA  107 (323)
T ss_dssp             ------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBT-----------------TTBCCHHHH
T ss_pred             ccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhh-----------------cCCCCHHHH
Confidence            344557789999999999999999999999999999999999999999666542                 345889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||.|||+.|++|+||||+||+++.        ||.+......      ....+|+.|+|||.+.+ ....+
T Consensus       108 ~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~  186 (323)
T 3tki_A          108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-REFHA  186 (323)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHC-SSBCH
T ss_pred             HHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhcc-CCCCC
Confidence            999999999999999999999999999999976        7776543221      24567999999999986 23347


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++||||||+++|+|++|..||...................    .       .....+++.+.+++.+||+.||.+|||
T Consensus       187 ~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~li~~~L~~dP~~R~t  255 (323)
T 3tki_A          187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY----L-------NPWKKIDSAPLALLHKILVENPSARIT  255 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT----S-------TTGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc----C-------CccccCCHHHHHHHHHHccCChhhCcC
Confidence            89999999999999999999998755543222222111100    0       111567899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       256 ~~eil~h~~~~  266 (323)
T 3tki_A          256 IPDIKKDRWYN  266 (323)
T ss_dssp             HHHHTTCTTTT
T ss_pred             HHHHhhChhhc
Confidence            99999999996

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=6.4e-43  Score=280.35  Aligned_cols=208  Identities=19%  Similarity=0.217  Sum_probs=168.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++.+++..++||||+++++|.+.+..             .......+++..+..+
T Consensus        69 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-------------~~~~~~~~~~~~~~~i  135 (351)
T 3c0i_A           69 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK-------------RADAGFVYSEAVASHY  135 (351)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHH-------------HHHTTCCCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHH-------------hcccCCCCCHHHHHHH
Confidence            357799999999999999999999999999999999999999999766642             1112345899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC----CCCccccccccCceecCCCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.||+.||.|||++|++||||||+||+++.           ||++......    ....+|+.|+|||.+.+  ..++.+
T Consensus       136 ~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  213 (351)
T 3c0i_A          136 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR--EPYGKP  213 (351)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTT--CCBCTH
T ss_pred             HHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcC--CCCCch
Confidence            999999999999999999999999999953           6766544332    23457999999999987  568999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|||||||++|+|++|..||.+.. ......+......     ..     ......+++++.++|.+||+.||.+|||+.
T Consensus       214 ~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~-----~~-----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~  282 (351)
T 3c0i_A          214 VDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYK-----MN-----PRQWSHISESAKDLVRRMLMLDPAERITVY  282 (351)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCC-----CC-----HHHHTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCC-----CC-----ccccccCCHHHHHHHHHHCCCChhHCcCHH
Confidence            999999999999999999998743 2333333322110     00     001145789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       283 e~l~hp~~~  291 (351)
T 3c0i_A          283 EALNHPWLK  291 (351)
T ss_dssp             HHHTSHHHH
T ss_pred             HHhcChhhc
Confidence            999999985

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=8.5e-43  Score=272.12  Aligned_cols=208  Identities=23%  Similarity=0.354  Sum_probs=167.7

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+|.+++..             .......+++..++.
T Consensus        62 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-------------~~~~~~~~~~~~~~~  128 (285)
T 3is5_A           62 VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVS-------------AQARGKALSEGYVAE  128 (285)
T ss_dssp             SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHH-------------HHHHTCCCCHHHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHh-------------hhhcccCCCHHHHHH
Confidence            3467899999999999999999999999999999999999999999776642             111246689999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ++.|++.||.|||+.|++|+||||+||+++.           ||.+......   ....+++.|+|||.+.   ..++.+
T Consensus       129 i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~~~  205 (285)
T 3is5_A          129 LMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK---RDVTFK  205 (285)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT---TCCCHH
T ss_pred             HHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc---cCCCcc
Confidence            9999999999999999999999999999932           7766543322   2345699999999985   347899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||.+..................           .....+++++.+++.+||+.||.+|||+.
T Consensus       206 ~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~  274 (285)
T 3is5_A          206 CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYA-----------VECRPLTPQAVDLLKQMLTKDPERRPSAA  274 (285)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-----------C--CCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             cCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccc-----------cccCcCCHHHHHHHHHHccCChhhCcCHH
Confidence            9999999999999999999998766655544433321110           01134788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||+
T Consensus       275 e~l~hp~f~  283 (285)
T 3is5_A          275 QVLHHEWFK  283 (285)
T ss_dssp             HHHTSGGGG
T ss_pred             HHhcCHHhh
Confidence            999999996

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.1e-42  Score=278.48  Aligned_cols=201  Identities=15%  Similarity=0.158  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+++++.++||||+++++++.+++..++||||+++|+|.+++..                 ...+++..++.+
T Consensus        84 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-----------------~~~~~~~~~~~~  146 (350)
T 1rdq_E           84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----------------IGRFSEPHARFY  146 (350)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-----------------cCCCCHHHHHHH
Confidence            456788999999999999999999999999999999999999999776652                 245889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-CCCccccccccCceecCCCCCCCchhhHHHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      +.||+.||.|||++|++||||||+||+++.        ||++...... ....||+.|+|||.+.+  ..++.++|+|||
T Consensus       147 ~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Diwsl  224 (350)
T 1rdq_E          147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILS--KGYNKAVDWWAL  224 (350)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTT--CCBCTHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHHHhcC--CCCCCcCCEecc
Confidence            999999999999999999999999999975        7777654332 24567999999999987  568999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----HHH
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----AEA  235 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~  235 (245)
                      ||++|+|++|..||...+.......+.....     .         .+..+++++.++|.+||+.||.+||+     +++
T Consensus       225 G~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-----~---------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~e  290 (350)
T 1rdq_E          225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----R---------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND  290 (350)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----C---------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHH
T ss_pred             cHhHhHHhhCCCCCCCCCHHHHHHHHHcCCC-----C---------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHH
Confidence            9999999999999998777766666654321     1         11457899999999999999999998     999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||.
T Consensus       291 i~~h~~f~  298 (350)
T 1rdq_E          291 IKNHKWFA  298 (350)
T ss_dssp             HHTSGGGT
T ss_pred             HHhCcCcC
Confidence            99999995

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=5e-43  Score=282.87  Aligned_cols=208  Identities=19%  Similarity=0.234  Sum_probs=173.8

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|++++++++||||+++++++.+.+..++||||+++++|.+++..                ....+++..+.
T Consensus       127 ~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~----------------~~~~l~~~~~~  190 (373)
T 2x4f_A          127 MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIID----------------ESYNLTELDTI  190 (373)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHH----------------TGGGCCHHHHH
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHh----------------cCCCCCHHHHH
Confidence            35677899999999999999999999999999999999999999999766642                12357889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceecc--c--------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHN--I--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~--~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|++.||.|||+.|++||||||+|||+.  .        ||++......   ....+|+.|+|||.+.+  ..++.+
T Consensus       191 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  268 (373)
T 2x4f_A          191 LFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNY--DFVSFP  268 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTT--CBCCHH
T ss_pred             HHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccC--CCCCcH
Confidence            9999999999999999999999999999983  2        7776644332   23457999999999986  568999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|||||||++|+|++|..||.+.+..+....+........          ......+++++.++|.+||+.||.+|||++
T Consensus       269 ~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~  338 (373)
T 2x4f_A          269 TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE----------DEEFQDISEEAKEFISKLLIKEKSWRISAS  338 (373)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSC----------SGGGTTSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             HhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC----------hhhhccCCHHHHHHHHHHcCCChhhCCCHH
Confidence            9999999999999999999998877776666654421110          011145789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       339 e~l~hp~~~  347 (373)
T 2x4f_A          339 EALKHPWLS  347 (373)
T ss_dssp             HHHHSHHHH
T ss_pred             HHhcCcCcC
Confidence            999999985

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=8.5e-43  Score=273.79  Aligned_cols=204  Identities=18%  Similarity=0.275  Sum_probs=165.2

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ..+.+.+|++++++++||||+++++++.+  ++..++||||+++++|.+++.                  ...+++..+.
T Consensus        79 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------------------~~~~~~~~~~  140 (298)
T 2zv2_A           79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------------------LKPLSEDQAR  140 (298)
T ss_dssp             --CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------------------SSCCCHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------------------cCCCCHHHHH
Confidence            35679999999999999999999999986  567999999999999944322                  3468999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCC-CCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDD-YYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~-~~~~~  154 (245)
                      .++.|++.||.|||++|++|+||||+||+++.        ||++......    ....+|+.|+|||.+.+... ..+.+
T Consensus       141 ~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  220 (298)
T 2zv2_A          141 FYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKA  220 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHH
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCch
Confidence            99999999999999999999999999999975        7776544332    24467999999999986222 14788


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||...........+.....     ..+       ....+++++.++|.+||+.||.+|||+.
T Consensus       221 ~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~l~~li~~~l~~dp~~R~s~~  288 (298)
T 2zv2_A          221 LDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL-----EFP-------DQPDIAEDLKDLITRMLDKNPESRIVVP  288 (298)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CCC-------SSSCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             hhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccC-----CCC-------CccccCHHHHHHHHHHhhcChhhCCCHH
Confidence            9999999999999999999988665555444433221     111       1145789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       289 e~l~hp~~~  297 (298)
T 2zv2_A          289 EIKLHPWVT  297 (298)
T ss_dssp             HHTTCHHHH
T ss_pred             HHhcCcccc
Confidence            999999984

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=9.9e-43  Score=274.94  Aligned_cols=216  Identities=20%  Similarity=0.258  Sum_probs=170.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+++..++||||+++ +|.+++..                ....+++..+..+
T Consensus        62 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----------------~~~~~~~~~~~~~  124 (311)
T 3niz_A           62 IPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDE----------------NKTGLQDSQIKIY  124 (311)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHT----------------CTTCCCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHh----------------ccCCCCHHHHHHH
Confidence            457789999999999999999999999999999999999986 77555532                1345889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||+.|++||||||+||+++.        ||.+......    ....+|+.|+|||.+.+ ...++.++||
T Consensus       125 ~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~Di  203 (311)
T 3niz_A          125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG-SKKYSTSVDI  203 (311)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTT-CCSCCTHHHH
T ss_pred             HHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcC-CCCCCchHHh
Confidence            999999999999999999999999999975        7776544322    23456999999999875 3458999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC----------------CCCCCCCCcccccHHHHHHHHH
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA----------------PNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~li~~  221 (245)
                      |||||++|+|++|+.||.+....+....+............+                ...........+++++.++|.+
T Consensus       204 wslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  283 (311)
T 3niz_A          204 WSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSN  283 (311)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHH
Confidence            999999999999999999877777666655433211111000                0000001123467899999999


Q ss_pred             hcCCCCCCCccHHHHhhccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ||+.||.+|||++++++||||.
T Consensus       284 ~L~~dP~~Rpt~~ell~hp~f~  305 (311)
T 3niz_A          284 MLCFDPNKRISARDAMNHPYFK  305 (311)
T ss_dssp             HSCSCTTTSCCHHHHHTSGGGT
T ss_pred             HcCCChhHCCCHHHHhcCcccc
Confidence            9999999999999999999996

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.4e-43  Score=283.72  Aligned_cols=207  Identities=18%  Similarity=0.244  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+++.++||||+++++++.+++..++||||+++|+|.+++..                 ...+++..++.+
T Consensus        59 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~i  121 (361)
T 3uc3_A           59 IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN-----------------AGRFSEDEARFF  121 (361)
T ss_dssp             SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-----------------HSSCCHHHHHHH
T ss_pred             ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHh-----------------cCCCCHHHHHHH
Confidence            346788999999999999999999999999999999999999999776642                 245899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCcccccc---CCCCccccccccCceecCCCCCCCc-hh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWI---SSSSSITTWAAAPEVVNFGDDYYSC-KS  155 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~-~~  155 (245)
                      +.|++.||+|||++|++||||||+||+++.          ||.+.....   .....+|+.|+|||.+.+  ..++. ++
T Consensus       122 ~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~  199 (361)
T 3uc3_A          122 FQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLR--QEYDGKIA  199 (361)
T ss_dssp             HHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHC--SSCCHHHH
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcC--CCCCCCee
Confidence            999999999999999999999999999964          666542222   224557999999999986  44544 49


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||||++|+|++|+.||.+.................. ...+       ....+++++.++|.+||+.||.+|||+++
T Consensus       200 DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~s~~~~~li~~~L~~dP~~Rps~~e  271 (361)
T 3uc3_A          200 DVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK-YSIP-------DDIRISPECCHLISRIFVADPATRISIPE  271 (361)
T ss_dssp             HHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTC-CCCC-------TTSCCCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             eeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCC-CCCC-------CcCCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            999999999999999999987554332222222111000 0111       11457899999999999999999999999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||.
T Consensus       272 ll~hp~f~  279 (361)
T 3uc3_A          272 IKTHSWFL  279 (361)
T ss_dssp             HHTSHHHH
T ss_pred             HHhCcchh
Confidence            99999983

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.6e-42  Score=269.76  Aligned_cols=216  Identities=19%  Similarity=0.242  Sum_probs=168.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+++..++|||++++ +|.+++..                ....+++..+..+
T Consensus        43 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----------------~~~~~~~~~~~~~  105 (288)
T 1ob3_A           43 IPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDV----------------CEGGLESVTAKSF  105 (288)
T ss_dssp             CCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHT----------------STTCCCHHHHHHH
T ss_pred             cchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHh----------------cccCCCHHHHHHH
Confidence            346788999999999999999999999999999999999986 88666642                1245888999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||++|++||||||+||+++.        ||.+.....    .....+|+.|+|||.+.+ ...++.++||
T Consensus       106 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~Di  184 (288)
T 1ob3_A          106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG-SKKYSTTIDI  184 (288)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTT-CCSCCTHHHH
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeC-CCCCCcHHHH
Confidence            999999999999999999999999999976        666543321    123456999999999874 3458999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC---------------CCCCCCCCcccccHHHHHHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA---------------PNEDTTHGTRTLSKNFWNMVKIC  222 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~  222 (245)
                      |||||++|+|++|..||.+.+..+....+............+               .+.........+++++.+++.+|
T Consensus       185 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  264 (288)
T 1ob3_A          185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM  264 (288)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHH
Confidence            999999999999999999877766666554432111100000               00001112245789999999999


Q ss_pred             cCCCCCCCccHHHHhhccccc
Q 037274          223 LAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       223 l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      |+.||.+|||++++++||||.
T Consensus       265 L~~dP~~Rpt~~e~l~hp~f~  285 (288)
T 1ob3_A          265 LKLDPNQRITAKQALEHAYFK  285 (288)
T ss_dssp             TCSSTTTSCCHHHHHTSGGGG
T ss_pred             cCCCcccCCCHHHHhcCcchh
Confidence            999999999999999999996

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=8.8e-43  Score=279.26  Aligned_cols=208  Identities=20%  Similarity=0.208  Sum_probs=157.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++.+++..++||||+++++|.+++..                 ...+++..+
T Consensus        88 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~  150 (349)
T 2w4o_A           88 KTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE-----------------KGYYSERDA  150 (349)
T ss_dssp             C----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT-----------------CSSCCHHHH
T ss_pred             cchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHh-----------------cCCCCHHHH
Confidence            334567788999999999999999999999999999999999999999776642                 345889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC---CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||.|||+.|++||||||+||+++.           ||++......   ....+|+.|+|||.+.+  ..++
T Consensus       151 ~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~  228 (349)
T 2w4o_A          151 ADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRG--CAYG  228 (349)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTT--CCCC
T ss_pred             HHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcC--CCCC
Confidence            999999999999999999999999999999952           7766544322   23456999999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchH-HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLD-IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|||||||++|+|++|..||....... ....+.....     ...     ......++.++.++|.+||+.||.+||
T Consensus       229 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~-----~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rp  298 (349)
T 2w4o_A          229 PEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY-----YFI-----SPWWDEVSLNAKDLVRKLIVLDPKKRL  298 (349)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC-----CCC-----TTTTTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             cccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC-----ccC-----CchhhhCCHHHHHHHHHHccCChhhCc
Confidence            99999999999999999999998766554 3333322211     000     111256789999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      |+.++++||||.
T Consensus       299 t~~e~l~hp~~~  310 (349)
T 2w4o_A          299 TTFQALQHPWVT  310 (349)
T ss_dssp             CHHHHHHSTTTT
T ss_pred             CHHHHhcCcccC
Confidence            999999999985

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=3.9e-42  Score=269.26  Aligned_cols=219  Identities=19%  Similarity=0.255  Sum_probs=167.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++.+++..++||||+++ ++.+.+..                ....+++..+
T Consensus        41 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----------------~~~~l~~~~~  103 (292)
T 3o0g_A           41 DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDS----------------CNGDLDPEIV  103 (292)
T ss_dssp             STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHH----------------TTTCCCHHHH
T ss_pred             cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHh----------------CCCCCCHHHH
Confidence            344567889999999999999999999999999999999999987 55333321                1356899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.++.|++.||.|||++|++||||||+||+++.        ||.+.....    .....+|+.|+|||.+.+ ...++.+
T Consensus       104 ~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~  182 (292)
T 3o0g_A          104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-AKLYSTS  182 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTT-CSCCCTH
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcC-CCCcCch
Confidence            999999999999999999999999999999976        777654432    223456999999999975 3447999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCC-CCCchHHHHHHHhcCCCCccCCCC---------------CCCCCCCCcccccHHHHHH
Q 037274          155 SDIWLIGITALQFPCGGLPVS-RRQDLDIMTKMLMKQPKSTSLQVA---------------PNEDTTHGTRTLSKNFWNM  218 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l  218 (245)
                      +||||||+++|+|++|..||. +.+..+....+............+               ...........+++++.++
T Consensus       183 ~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  262 (292)
T 3o0g_A          183 IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDL  262 (292)
T ss_dssp             HHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHH
Confidence            999999999999998887754 444444554444322111110000               0000111124578899999


Q ss_pred             HHHhcCCCCCCCccHHHHhhccccc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.+||+.||.+|||++++++||||.
T Consensus       263 i~~~L~~dP~~R~t~~e~l~hp~f~  287 (292)
T 3o0g_A          263 LQNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HHHHhccChhhCCCHHHHhcCcccc
Confidence            9999999999999999999999996

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.3e-42  Score=277.40  Aligned_cols=201  Identities=17%  Similarity=0.241  Sum_probs=171.4

Q ss_pred             HHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+..|..+++++ +||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+..
T Consensus        60 ~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~~~~~~~~~  122 (345)
T 1xjd_A           60 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-----------------CHKFDLSRATF  122 (345)
T ss_dssp             CHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HSSCCHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHHHHH
Confidence            456788999999877 899999999999999999999999999999776652                 24588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc----cCCCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW----ISSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||.|||++|++||||||+||+++.        ||+++...    ......||+.|+|||.+.+  ..++.++|
T Consensus       123 ~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D  200 (345)
T 1xjd_A          123 YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG--QKYNHSVD  200 (345)
T ss_dssp             HHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT--CCBCTHHH
T ss_pred             HHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcC--CCCCChhh
Confidence            9999999999999999999999999999976        88776432    2234567999999999987  56899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH-H
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE-A  235 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~  235 (245)
                      +|||||++|+|++|..||.+.+.......+.....              ..+..+++++.++|.+||..||.+||++. +
T Consensus       201 iwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~--------------~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~  266 (345)
T 1xjd_A          201 WWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP--------------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGD  266 (345)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--------------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSC
T ss_pred             hHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCC--------------CCCcccCHHHHHHHHHHhcCCHhHcCCChHH
Confidence            99999999999999999998777666666544321              01145789999999999999999999998 9


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||+
T Consensus       267 i~~hp~f~  274 (345)
T 1xjd_A          267 IRQHPLFR  274 (345)
T ss_dssp             GGGSGGGT
T ss_pred             HHcCcccc
Confidence            99999995

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3.7e-42  Score=268.29  Aligned_cols=209  Identities=20%  Similarity=0.217  Sum_probs=173.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++..++..++++|++++++|.+.+..                 ...+++..+
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-----------------~~~~~~~~~  107 (284)
T 3kk8_A           45 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-----------------REFYSEADA  107 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-----------------HSSCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHh-----------------cCCCCHHHH
Confidence            455678899999999999999999999999999999999999999999665542                 245889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||.|||++|++|+||||+||+++.           ||.+.......   ...+++.|+|||.+.+  ..++
T Consensus       108 ~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  185 (284)
T 3kk8_A          108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK--DPYS  185 (284)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTT--CCBC
T ss_pred             HHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcC--CCCC
Confidence            999999999999999999999999999999953           66654333222   3456999999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++||||||+++|+|++|..||...+.......+.........          .....+++++.+++.+||+.||.+|||
T Consensus       186 ~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps  255 (284)
T 3kk8_A          186 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS----------PEWDTVTPEAKSLIDSMLTVNPKKRIT  255 (284)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT----------TTTTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             cccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCc----------hhhcccCHHHHHHHHHHcccChhhCCC
Confidence            9999999999999999999999987776666655443321111          111467899999999999999999999


Q ss_pred             HHHHhhcccccc
Q 037274          233 AEAQVLQEMWHF  244 (245)
Q Consensus       233 ~~~~l~~~~f~~  244 (245)
                      ++++++||||.-
T Consensus       256 ~~~~l~h~~~~~  267 (284)
T 3kk8_A          256 ADQALKVPWICN  267 (284)
T ss_dssp             HHHHTTSHHHHS
T ss_pred             HHHHhcCccccC
Confidence            999999999864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.9e-43  Score=277.97  Aligned_cols=200  Identities=20%  Similarity=0.244  Sum_probs=163.2

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|+.+++.++||||+++++++.+++..++||||+ +|+|.+++..                 ...+++..+..++
T Consensus        53 ~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~-----------------~~~l~~~~~~~i~  114 (336)
T 3h4j_B           53 HMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVE-----------------KKRMTEDEGRRFF  114 (336)
T ss_dssp             SHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHH-----------------HCSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHH-----------------cCCCCHHHHHHHH
Confidence            357899999999999999999999999999999999999 5688665531                 3468899999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhHHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      .|++.||.|||+.|++||||||+||+++.        ||++......   ....+|+.|+|||.+.+ ....+.++||||
T Consensus       115 ~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~Diws  193 (336)
T 3h4j_B          115 QQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING-KLYAGPEVDVWS  193 (336)
T ss_dssp             HHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCC-SGGGCHHHHHHH
T ss_pred             HHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcC-CCCCCCccchhH
Confidence            99999999999999999999999999986        7776544332   24567999999999986 223378999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ||+++|+|++|..||.+........    ..          .......+..+++++.++|.+||+.||.+|||++++++|
T Consensus       194 lG~il~~ll~g~~Pf~~~~~~~~~~----~i----------~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          194 CGIVLYVMLVGRLPFDDEFIPNLFK----KV----------NSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             HHHHHHHHHHSSCSSBCSSSTTCBC----CC----------CSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHHhCCCCCCCccHHHHHH----HH----------HcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            9999999999999998744322110    00          001112235678999999999999999999999999999


Q ss_pred             cccc
Q 037274          240 EMWH  243 (245)
Q Consensus       240 ~~f~  243 (245)
                      |||.
T Consensus       260 p~~~  263 (336)
T 3h4j_B          260 PWFN  263 (336)
T ss_dssp             HHHH
T ss_pred             hhhc
Confidence            9985

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=4.7e-42  Score=274.44  Aligned_cols=204  Identities=18%  Similarity=0.254  Sum_probs=167.6

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+..+.+.+|+.+++++ +||||+++++++.+++..++||||+++|+|.+++..                 ...+++..
T Consensus        49 ~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~-----------------~~~l~~~~  111 (345)
T 3a8x_A           49 DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-----------------QRKLPEEH  111 (345)
T ss_dssp             SHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-----------------HSSCCHHH
T ss_pred             chHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHH
Confidence            456678899999999988 899999999999999999999999999999766642                 24589999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc----cCCCCccccccccCceecCCCCCCCc
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW----ISSSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ++.++.||+.||.|||++|++||||||+||+++.        ||+++...    ......||+.|+|||.+.+  ..++.
T Consensus       112 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~  189 (345)
T 3a8x_A          112 ARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG--EDYGF  189 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTT--CCBCT
T ss_pred             HHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCC--CCCCh
Confidence            9999999999999999999999999999999976        77766422    1234567999999999987  66899


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCc---------hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcC
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQD---------LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      ++|+|||||++|+|++|..||.....         ......+....       .       ..+..++.++.++|.+||+
T Consensus       190 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-------~-------~~p~~~s~~~~~li~~lL~  255 (345)
T 3a8x_A          190 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-------I-------RIPRSLSVKAASVLKSFLN  255 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-------C-------CCCTTSCHHHHHHHHHHTC
T ss_pred             HHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-------C-------CCCCCCCHHHHHHHHHHhc
Confidence            99999999999999999999975211         11222222211       0       1114578999999999999


Q ss_pred             CCCCCCccH------HHHhhccccc
Q 037274          225 PDPAKRPAA------EAQVLQEMWH  243 (245)
Q Consensus       225 ~~p~~Rpt~------~~~l~~~~f~  243 (245)
                      .||.+||++      +++++||||+
T Consensus       256 ~dP~~R~~~~~~~~~~~i~~hp~f~  280 (345)
T 3a8x_A          256 KDPKERLGCHPQTGFADIQGHPFFR  280 (345)
T ss_dssp             SSTTTSTTCCTTTHHHHHHTSGGGT
T ss_pred             CCHhHCCCCCCcCCHHHHhcCCccC
Confidence            999999995      8999999995

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=6.3e-43  Score=284.71  Aligned_cols=204  Identities=17%  Similarity=0.257  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      +.+.+|+.+++.++||||+++++++.+++..++||||+++|+|.+++.                  ...+++..+..++.
T Consensus       114 ~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~------------------~~~~~e~~~~~~~~  175 (410)
T 3v8s_A          114 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS------------------NYDVPEKWARFYTA  175 (410)
T ss_dssp             STHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH------------------HCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHH------------------cCCCCHHHHHHHHH
Confidence            347899999999999999999999999999999999999999977664                  23588999999999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----CCCccccccccCceecCCC--CCCCchhh
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----SSSSITTWAAAPEVVNFGD--DYYSCKSD  156 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~--~~~~~~~D  156 (245)
                      ||+.||.|||+.||+||||||+|||++.        ||++......     ....||+.|+|||.+.+..  ..++.++|
T Consensus       176 qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~D  255 (410)
T 3v8s_A          176 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD  255 (410)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHH
T ss_pred             HHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcce
Confidence            9999999999999999999999999976        8877554332     2567899999999998621  12789999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC--CccHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK--RPAAE  234 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rpt~~  234 (245)
                      +|||||++|+|++|..||.+.+.......+......   ...+.       ...+++++.++|.+||..+|.+  ||+++
T Consensus       256 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~---~~~p~-------~~~~s~~~~~li~~lL~~~~~rlgR~~~~  325 (410)
T 3v8s_A          256 WWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS---LTFPD-------DNDISKEAKNLICAFLTDREVRLGRNGVE  325 (410)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH---CCCCT-------TCCCCHHHHHHHHHHSSCGGGCTTSSCHH
T ss_pred             EecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc---ccCCC-------cccccHHHHHHHHHHccChhhhCCCCCHH
Confidence            999999999999999999988877777666543210   01111       1458899999999999999988  99999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||+
T Consensus       326 ei~~Hp~f~  334 (410)
T 3v8s_A          326 EIKRHLFFK  334 (410)
T ss_dssp             HHHTSGGGC
T ss_pred             HHhcCcccc
Confidence            999999995

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=3.2e-42  Score=275.77  Aligned_cols=208  Identities=22%  Similarity=0.382  Sum_probs=173.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.++++++||||+++++++.+++..++||||+.+ +|.+++..                ....+++..+
T Consensus        94 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~----------------~~~~l~~~~~  156 (348)
T 1u5q_A           94 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEV----------------HKKPLQEVEI  156 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHH----------------HTSCCCHHHH
T ss_pred             chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCCC-CHHHHHHH----------------hcCCCCHHHH
Confidence            345667899999999999999999999999999999999999984 77655531                1356889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCccccccccCceecC-CCCCCCchhhH
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSITTWAAAPEVVNF-GDDYYSCKSDI  157 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~~Dv  157 (245)
                      ..++.|++.||.|||++|++||||||+||+++.        ||++..........+|+.|+|||.+.+ ....++.++||
T Consensus       157 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di  236 (348)
T 1u5q_A          157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDV  236 (348)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCcceeCHhhhccccCCCCCcHHHH
Confidence            999999999999999999999999999999976        888776666667778999999999853 12568899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      |||||++|+|++|..||...+.......+.......            .....+++.+.++|.+||+.||.+|||+++++
T Consensus       237 wslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll  304 (348)
T 1u5q_A          237 WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL  304 (348)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHh
Confidence            999999999999999998877666555444332100            11145789999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +||||.
T Consensus       305 ~h~~~~  310 (348)
T 1u5q_A          305 KHRFVL  310 (348)
T ss_dssp             TCHHHH
T ss_pred             hChhhh
Confidence            999974

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.4e-42  Score=279.93  Aligned_cols=203  Identities=19%  Similarity=0.269  Sum_probs=164.9

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+..+.+.+|..+++++ +||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+
T Consensus        93 ~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-----------------~~~l~~~~~  155 (396)
T 4dc2_A           93 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-----------------QRKLPEEHA  155 (396)
T ss_dssp             ---CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HSSCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHH-----------------cCCCCHHHH
Confidence            44556788999999887 899999999999999999999999999999766642                 246899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc----cCCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW----ISSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.||+.||.|||++||+||||||+|||++.        ||+++...    .....+||+.|+|||++.+  ..++.+
T Consensus       156 ~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~~~~  233 (396)
T 4dc2_A          156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG--EDYGFS  233 (396)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTT--CCBCTH
T ss_pred             HHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcC--CCCChH
Confidence            999999999999999999999999999999976        88776422    2235567999999999987  668999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCch--------H-HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCC
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDL--------D-IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP  225 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  225 (245)
                      +|+|||||++|+|++|..||......        . ....+....       .       ..+..+++++.++|.+||+.
T Consensus       234 ~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-------~-------~~p~~~s~~~~~li~~lL~~  299 (396)
T 4dc2_A          234 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-------I-------RIPRSLSVKAASVLKSFLNK  299 (396)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-------C-------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-------c-------CCCCcCCHHHHHHHHHHhcC
Confidence            99999999999999999999643211        1 222222211       1       11255789999999999999


Q ss_pred             CCCCCccH------HHHhhccccc
Q 037274          226 DPAKRPAA------EAQVLQEMWH  243 (245)
Q Consensus       226 ~p~~Rpt~------~~~l~~~~f~  243 (245)
                      ||.+||++      +++++||||+
T Consensus       300 dP~~R~~~~~~~~~~ei~~Hpff~  323 (396)
T 4dc2_A          300 DPKERLGCHPQTGFADIQGHPFFR  323 (396)
T ss_dssp             CTTTSTTCSTTTHHHHHHHSTTTT
T ss_pred             CHhHcCCCCCCCCHHHHhcCcccc
Confidence            99999984      8999999995

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=2.2e-42  Score=274.69  Aligned_cols=203  Identities=17%  Similarity=0.155  Sum_probs=163.8

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ......+.+|+.++++++||||+++++++..++..++||||+++++|.+++..                 ...+++..+.
T Consensus        62 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~  124 (327)
T 3a62_A           62 AKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-----------------EGIFMEDTAC  124 (327)
T ss_dssp             ---------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHH-----------------HSSCCHHHHH
T ss_pred             hhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHh-----------------CCCCCHHHHH
Confidence            34566788999999999999999999999999999999999999999776642                 2457889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||++|++||||||+||+++.        ||++.....    .....+|+.|+|||.+.+  ..++.++
T Consensus       125 ~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  202 (327)
T 3a62_A          125 FYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR--SGHNRAV  202 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTT--SCCCTHH
T ss_pred             HHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcC--CCCCCcc
Confidence            99999999999999999999999999999975        776654322    223467999999999987  5689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc----
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP----  231 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----  231 (245)
                      ||||||+++|+|++|..||.+.+.......+.....     .         .+..+++++.++|.+||..||.+||    
T Consensus       203 DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-----~---------~p~~~~~~~~~li~~~L~~dp~~R~~~~~  268 (327)
T 3a62_A          203 DWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL-----N---------LPPYLTQEARDLLKKLLKRNAASRLGAGP  268 (327)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----C---------CCTTSCHHHHHHHHHHSCSCGGGSTTSST
T ss_pred             cchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC-----C---------CCCCCCHHHHHHHHHHHhcCHhhccCCCC
Confidence            999999999999999999998777666666554321     1         1145789999999999999999999    


Q ss_pred             -cHHHHhhccccc
Q 037274          232 -AAEAQVLQEMWH  243 (245)
Q Consensus       232 -t~~~~l~~~~f~  243 (245)
                       +++++++||||+
T Consensus       269 ~~~~e~l~hp~f~  281 (327)
T 3a62_A          269 GDAGEVQAHPFFR  281 (327)
T ss_dssp             TTHHHHHHSGGGS
T ss_pred             CCHHHHHcCCccc
Confidence             889999999995

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=3.4e-42  Score=275.75  Aligned_cols=201  Identities=14%  Similarity=0.197  Sum_probs=171.7

Q ss_pred             HHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+..|..+++.+ +||||+++++++.+.+..++||||+++|+|.+++..                 ...+++..++.
T Consensus        63 ~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~~~~~~~~~  125 (353)
T 2i0e_A           63 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-----------------VGRFKEPHAVF  125 (353)
T ss_dssp             CHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-----------------HSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-----------------cCCCCHHHHHH
Confidence            456788999999988 799999999999999999999999999999776642                 24588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccc----cCCCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNW----ISSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.||+.||.|||++|++||||||+|||++.        ||++....    ......||+.|+|||.+.+  ..++.++|
T Consensus       126 ~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D  203 (353)
T 2i0e_A          126 YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY--QPYGKSVD  203 (353)
T ss_dssp             HHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT--CCBSTHHH
T ss_pred             HHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcC--CCcCCccc
Confidence            9999999999999999999999999999976        88776432    2234567999999999987  66899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----  231 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----  231 (245)
                      +|||||++|+|++|..||.+.+.......+.....     .         .+..+++++.++|.+||..||.+||     
T Consensus       204 iwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-----~---------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~  269 (353)
T 2i0e_A          204 WWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-----A---------YPKSMSKEAVAICKGLMTKHPGKRLGCGPE  269 (353)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----C---------CCTTSCHHHHHHHHHHTCSCTTSCTTCSTT
T ss_pred             ccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC-----C---------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCC
Confidence            99999999999999999998777776666654321     1         1145789999999999999999999     


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      +++++++||||+
T Consensus       270 ~~~~i~~h~~f~  281 (353)
T 2i0e_A          270 GERDIKEHAFFR  281 (353)
T ss_dssp             HHHHHHTSGGGT
T ss_pred             CHHHHhcCcccc
Confidence            569999999996

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.3e-42  Score=277.93  Aligned_cols=226  Identities=19%  Similarity=0.289  Sum_probs=172.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCC----------------hhhHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNS----------------PAATQL   71 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~----------------~~~~~~   71 (245)
                      .+..+.+.+|++++++++||||+++++++.+++..++||||+++|+|.+++.......                ......
T Consensus        69 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (345)
T 3hko_A           69 PKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE  148 (345)
T ss_dssp             -CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccc
Confidence            3456789999999999999999999999999999999999999999988875210000                000000


Q ss_pred             Hh-------hhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCcccccc------
Q 037274           72 IM-------SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWI------  128 (245)
Q Consensus        72 ~~-------~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~------  128 (245)
                      ..       .......+++..++.++.|++.||.|||+.|++|+||||+||+++.          ||.+.....      
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~  228 (345)
T 3hko_A          149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY  228 (345)
T ss_dssp             HHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--
T ss_pred             ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcccc
Confidence            00       0001223467888999999999999999999999999999999953          666654322      


Q ss_pred             --CCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCC
Q 037274          129 --SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTH  206 (245)
Q Consensus       129 --~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (245)
                        .....+|+.|+|||.+.+....++.++||||||+++|+|++|..||.+.+..+....+.........          .
T Consensus       229 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------~  298 (345)
T 3hko_A          229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN----------P  298 (345)
T ss_dssp             ------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTS----------G
T ss_pred             ccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCC----------c
Confidence              1234569999999999764466899999999999999999999999988777776666554321110          1


Q ss_pred             CcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          207 GTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       207 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ....+++++.++|.+||+.||.+|||+.++++||||.
T Consensus       299 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~  335 (345)
T 3hko_A          299 NYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS  335 (345)
T ss_dssp             GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHH
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhc
Confidence            1145789999999999999999999999999999985

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.9e-42  Score=278.56  Aligned_cols=203  Identities=19%  Similarity=0.254  Sum_probs=167.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+.+..++||||+.+|+|.+++..                 ...+++..+..+
T Consensus        58 ~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~-----------------~~~l~~~~~~~~  120 (384)
T 4fr4_A           58 EVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ-----------------NVHFKEETVKLF  120 (384)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHT-----------------TCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHh-----------------cCCCCHHHHHHH
Confidence            456788999999999999999999999999999999999999999776652                 356899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCC-CCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFG-DDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv  157 (245)
                      +.|++.||.|||++||+||||||+|||++.        ||++......   ....||+.|+|||.+... ...++.++|+
T Consensus       121 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~Di  200 (384)
T 4fr4_A          121 ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDW  200 (384)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHH
T ss_pred             HHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCcccee
Confidence            999999999999999999999999999976        7777644322   355679999999998742 2458899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHH---HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-H
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDI---MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-A  233 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-~  233 (245)
                      |||||++|+|++|..||........   ...+....       .       ..+..+++++.++|.+||+.||.+||+ +
T Consensus       201 wSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~-------~-------~~p~~~s~~~~~li~~lL~~dP~~R~s~~  266 (384)
T 4fr4_A          201 WSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV-------V-------TYPSAWSQEMVSLLKKLLEPNPDQRFSQL  266 (384)
T ss_dssp             HHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC-------C-------CCCTTSCHHHHHHHHHHSCSSGGGSCCSH
T ss_pred             echHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc-------c-------CCCCcCCHHHHHHHHHHhcCCHhHhcccH
Confidence            9999999999999999975433222   22221111       0       111557899999999999999999998 8


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      +++++||||.
T Consensus       267 ~~l~~hp~f~  276 (384)
T 4fr4_A          267 SDVQNFPYMN  276 (384)
T ss_dssp             HHHHTSGGGT
T ss_pred             HHHHcChhhh
Confidence            9999999995

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=3.3e-42  Score=285.11  Aligned_cols=202  Identities=21%  Similarity=0.284  Sum_probs=172.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+++.++||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+..+
T Consensus        59 ~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~l~~~~~~~i  121 (476)
T 2y94_A           59 VVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK-----------------NGRLDEKESRRL  121 (476)
T ss_dssp             THHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTS-----------------SSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHh-----------------cCCCCHHHHHHH
Confidence            356799999999999999999999999999999999999999999776642                 346899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      +.||+.||.|||++|++||||||+||+++.        ||++......   ....+|+.|+|||.+.+ ....+.++|||
T Consensus       122 ~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~Diw  200 (476)
T 2y94_A          122 FQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG-RLYAGPEVDIW  200 (476)
T ss_dssp             HHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTT-CCBCSHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEChhhccC-CCCCCCcceeh
Confidence            999999999999999999999999999976        7877654332   24567999999999986 33347899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      ||||++|+|++|..||.+.+.......+.....              ..+..+++++.++|.+||+.||.+|||++++++
T Consensus       201 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--------------~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          201 SSGVILYALLCGTLPFDDDHVPTLFKKICDGIF--------------YTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC--------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc--------------CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            999999999999999998777666665544321              011457889999999999999999999999999


Q ss_pred             ccccc
Q 037274          239 QEMWH  243 (245)
Q Consensus       239 ~~~f~  243 (245)
                      ||||.
T Consensus       267 hp~~~  271 (476)
T 2y94_A          267 HEWFK  271 (476)
T ss_dssp             CHHHH
T ss_pred             CHHhh
Confidence            99985

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=6.4e-42  Score=285.61  Aligned_cols=204  Identities=20%  Similarity=0.293  Sum_probs=171.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++.+.+..++|+||+.+|+|.+.+..                 ...+++..+..+
T Consensus        64 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~i  126 (486)
T 3mwu_A           64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK-----------------RKRFSEHDAARI  126 (486)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-----------------HSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHh-----------------cCCCCHHHHHHH
Confidence            457789999999999999999999999999999999999999999665542                 246899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC---CCCccccccccCceecCCCCCCCchh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      +.|++.||.|||++|++||||||+||+++.           ||++......   ....+|+.|+|||.+.+   .++.++
T Consensus       127 ~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~  203 (486)
T 3mwu_A          127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG---TYDEKC  203 (486)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS---CCCHHH
T ss_pred             HHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC---CCCchh
Confidence            999999999999999999999999999942           7776544332   24467999999999874   389999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||||++|+|++|..||.+.+..+....+........          ......+++++.++|.+||+.||.+|||+.+
T Consensus       204 DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~  273 (486)
T 3mwu_A          204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD----------LPQWRTISDDAKDLIRKMLTFHPSLRITATQ  273 (486)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC----------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----------CcccCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            999999999999999999999877777666554331110          0112567899999999999999999999999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||.
T Consensus       274 ~l~hp~~~  281 (486)
T 3mwu_A          274 CLEHPWIQ  281 (486)
T ss_dssp             HHHCHHHH
T ss_pred             HhcCHhhc
Confidence            99999985

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2.9e-42  Score=274.28  Aligned_cols=216  Identities=17%  Similarity=0.188  Sum_probs=164.7

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.++++++||||+++++++.+++..++||||+++ +|.+++..                 ...+++..++.
T Consensus        75 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-----------------~~~~~~~~~~~  136 (329)
T 3gbz_A           75 GVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDK-----------------NPDVSMRVIKS  136 (329)
T ss_dssp             -----CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHH-----------------CTTCCHHHHHH
T ss_pred             ccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-CHHHHHhh-----------------cCCCCHHHHHH
Confidence            3456788999999999999999999999999999999999985 89776642                 34588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc-------------ccCcccccc----CCCCccccccccCceecCCCCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI-------------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ++.|++.||.|||++|++|+||||+||+++.             ||.+.....    .....+|+.|+|||.+.+ ...+
T Consensus       137 i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~  215 (329)
T 3gbz_A          137 FLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG-SRHY  215 (329)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTT-CCCC
T ss_pred             HHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcC-CCCC
Confidence            9999999999999999999999999999942             666543321    123455999999999975 3458


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCC----C------------CCCCcccccHHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNE----D------------TTHGTRTLSKNF  215 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------------~~~~~~~~~~~~  215 (245)
                      +.++|||||||++|+|++|..||......+....+............+...    .            .......+++++
T Consensus       216 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (329)
T 3gbz_A          216 STSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEG  295 (329)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHH
Confidence            999999999999999999999999887777666665443211111100000    0            000112367899


Q ss_pred             HHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          216 WNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       216 ~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .++|.+||+.||.+|||++++++||||.
T Consensus       296 ~~li~~~L~~dP~~R~t~~e~l~hp~f~  323 (329)
T 3gbz_A          296 LDLLTAMLEMDPVKRISAKNALEHPYFS  323 (329)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             HHHHHHHccCChhhCCCHHHHhCCcccC
Confidence            9999999999999999999999999996

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.5e-42  Score=269.87  Aligned_cols=219  Identities=20%  Similarity=0.281  Sum_probs=168.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|++++++++||||+++++++..++..++||||+++++|.+++..                 ...+++..+
T Consensus        42 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----------------~~~~~~~~~  104 (311)
T 4agu_A           42 DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY-----------------QRGVPEHLV  104 (311)
T ss_dssp             -HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHT-----------------SSCCCHHHH
T ss_pred             chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhh-----------------hcCCCHHHH
Confidence            345567889999999999999999999999999999999999999999665542                 345889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||.|||+.|++|+||||+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.+
T Consensus       105 ~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~  183 (311)
T 4agu_A          105 KSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG-DTQYGPP  183 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHT-CSCCCTH
T ss_pred             HHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhc-CCCCCcc
Confidence            999999999999999999999999999999975        7766543322    23456899999999874 3567999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCC--------------ccCCCCCCCCC---CCCcccccHHHHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKS--------------TSLQVAPNEDT---THGTRTLSKNFWN  217 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~---~~~~~~~~~~~~~  217 (245)
                      +||||||+++|+|++|..||.+....+....+.......              .....+.+...   ......+++++.+
T Consensus       184 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (311)
T 4agu_A          184 VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALG  263 (311)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHH
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHH
Confidence            999999999999999999999877666554443321110              00011111000   0011357888999


Q ss_pred             HHHHhcCCCCCCCccHHHHhhccccc
Q 037274          218 MVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++.+||+.||.+|||++++++||||.
T Consensus       264 li~~~L~~dP~~Rpt~~ell~hp~f~  289 (311)
T 4agu_A          264 LLKGCLHMDPTERLTCEQLLHHPYFE  289 (311)
T ss_dssp             HHHHHCCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHccCChhhcCCHHHHhcChHHH
Confidence            99999999999999999999999996

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=6e-42  Score=275.71  Aligned_cols=220  Identities=19%  Similarity=0.166  Sum_probs=170.3

Q ss_pred             ccHHHHHHHHHHHHHHhhCC-----CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            6 HQAEEYAKLAREIYRYKHLS-----HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~-----h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      ......+.+..|+.+++.++     ||||+++++++...+..++|||++ +++|.+++..               .....
T Consensus        70 ~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---------------~~~~~  133 (360)
T 3llt_A           70 NIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITR---------------NNYNG  133 (360)
T ss_dssp             SCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHH---------------TTTCC
T ss_pred             cchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHh---------------cCCCC
Confidence            34566778889999999996     999999999999999999999999 7899776652               22345


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceecc--------------------------c-------ccCccccc
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------------------I-------FNDDTRNW  127 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~--------------------------~-------f~~~~~~~  127 (245)
                      +++..+..++.||+.||.|||+.|++||||||+|||++                          .       ||.+....
T Consensus       134 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~  213 (360)
T 3llt_A          134 FHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS  213 (360)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecC
Confidence            88999999999999999999999999999999999995                          1       77665433


Q ss_pred             cC-CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC----------
Q 037274          128 IS-SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL----------  196 (245)
Q Consensus       128 ~~-~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------  196 (245)
                      .. ....+|+.|+|||.+.+  ..++.++|||||||++|+|++|+.||...+..+....+..........          
T Consensus       214 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  291 (360)
T 3llt_A          214 DYHGSIINTRQYRAPEVILN--LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNG  291 (360)
T ss_dssp             SCCCSCCSCGGGCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGG
T ss_pred             CCCcCccCcccccCcHHHcC--CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccC
Confidence            32 24456999999999987  568999999999999999999999999877666555443322110000          


Q ss_pred             -----------CCCCCCC-----------CCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          197 -----------QVAPNED-----------TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       197 -----------~~~~~~~-----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                                 ..+....           ........++.+.++|.+||+.||.+|||++++++||||+
T Consensus       292 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          292 SKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             GGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             ccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                       0000000           0000012246788999999999999999999999999995

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=6.6e-42  Score=271.41  Aligned_cols=205  Identities=15%  Similarity=0.183  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++.+++..++|||++++++|.+++..                 ...+++..++.+
T Consensus        58 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~i  120 (321)
T 2a2a_A           58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ-----------------KESLSEEEATSF  120 (321)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-----------------CSCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHh-----------------cCCCCHHHHHHH
Confidence            367799999999999999999999999999999999999999999777752                 346889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc------------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.|++.||.|||+.|++|+||||+||+++.            ||.+......   ....+|+.|+|||.+.+  ..++.+
T Consensus       121 ~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  198 (321)
T 2a2a_A          121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY--EPLGLE  198 (321)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTT--CCCCTH
T ss_pred             HHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCcccccC--CCCCCc
Confidence            999999999999999999999999999864            5555433322   23456999999999987  568999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||.+.+..+....+.......          ........++.+.++|.+||+.||.+|||++
T Consensus       199 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  268 (321)
T 2a2a_A          199 ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF----------DEEFFSHTSELAKDFIRKLLVKETRKRLTIQ  268 (321)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC----------CHHHHTTCCHHHHHHHHTTSCSSTTTSCCHH
T ss_pred             cccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccccc----------ChhhhcccCHHHHHHHHHHcCCChhhCcCHH
Confidence            999999999999999999999877666655544322100          0011145788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       269 e~l~hp~~~  277 (321)
T 2a2a_A          269 EALRHPWIT  277 (321)
T ss_dssp             HHHHSTTTS
T ss_pred             HHhcCcccc
Confidence            999999985

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=4.9e-42  Score=286.80  Aligned_cols=204  Identities=23%  Similarity=0.309  Sum_probs=171.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+|.+.+..                 ...+++..+..+
T Consensus        79 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-----------------~~~~~~~~~~~i  141 (494)
T 3lij_A           79 SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH-----------------RMKFNEVDAAVI  141 (494)
T ss_dssp             TTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-----------------HSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHH-----------------cCCCCHHHHHHH
Confidence            356789999999999999999999999999999999999999999665542                 245889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC---CCCccccccccCceecCCCCCCCchh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      +.||+.||.|||++|++||||||+||+++.           ||++......   ....+|+.|+|||.+.   ..++.++
T Consensus       142 ~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~  218 (494)
T 3lij_A          142 IKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR---KKYDEKC  218 (494)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT---TCBCTHH
T ss_pred             HHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc---ccCCCch
Confidence            999999999999999999999999999953           7766544322   2456799999999986   3489999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||||++|+|++|..||.+.+..+....+.........          .....+++.+.++|.+||+.||.+|||+.+
T Consensus       219 DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~----------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e  288 (494)
T 3lij_A          219 DVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS----------PEWKNVSEGAKDLIKQMLQFDSQRRISAQQ  288 (494)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCS----------GGGTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc----------hhcccCCHHHHHHHHHHCCCChhhCccHHH
Confidence            9999999999999999999998877766666544321110          111457899999999999999999999999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||.
T Consensus       289 ~l~hp~~~  296 (494)
T 3lij_A          289 ALEHPWIK  296 (494)
T ss_dssp             HHTCHHHH
T ss_pred             HhcCcccc
Confidence            99999984

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=6.2e-42  Score=266.13  Aligned_cols=204  Identities=20%  Similarity=0.290  Sum_probs=169.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+++..++||||+++++|.+++..                 ...+++..++.+
T Consensus        49 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~i  111 (277)
T 3f3z_A           49 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-----------------KRVFRESDAARI  111 (277)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-----------------HCSCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHH-----------------cCCCCHHHHHHH
Confidence            467899999999999999999999999999999999999999999766642                 345889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceec---cc--------ccCccccccC---CCCccccccccCceecCCCCCCCchh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILH---NI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~---~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      +.|++.||.|||++|++|+||||+||++   +.        ||.+......   ....+|+.|+|||.+.+   .++.++
T Consensus       112 ~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~  188 (277)
T 3f3z_A          112 MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG---LYGPEC  188 (277)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT---CBCTTH
T ss_pred             HHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhcc---cCCchh
Confidence            9999999999999999999999999999   32        7766543322   24456999999999864   389999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      ||||||+++|+|++|..||...........+.........          .....+++.+.+++.+||+.||.+|||+.+
T Consensus       189 Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~  258 (277)
T 3f3z_A          189 DEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPE----------KDWLNVSPQAESLIRRLLTKSPKQRITSLQ  258 (277)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH----------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             hehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCc----------hhhhcCCHHHHHHHHHHccCChhhCcCHHH
Confidence            9999999999999999999987776666655443311100          011357899999999999999999999999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||.
T Consensus       259 ~l~h~~~~  266 (277)
T 3f3z_A          259 ALEHEWFE  266 (277)
T ss_dssp             HTTSHHHH
T ss_pred             HhcCHHHh
Confidence            99999985

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.8e-42  Score=284.14  Aligned_cols=203  Identities=18%  Similarity=0.242  Sum_probs=164.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+....+.+|+.++++++||||+++++++.+.+..++||||+++|+|.+++..                 ...+++..+.
T Consensus       189 ~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~  251 (446)
T 4ejn_A          189 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-----------------ERVFSEDRAR  251 (446)
T ss_dssp             ------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHH-----------------HSCCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHh-----------------cCCCCHHHHH
Confidence            34556788999999999999999999999999999999999999999766642                 3468899999


Q ss_pred             HHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|++.||.|||+ .||+||||||+|||++.        ||++.....    .....||+.|+|||.+.+  ..++.+
T Consensus       252 ~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  329 (446)
T 4ejn_A          252 FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED--NDYGRA  329 (446)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHT--SCCCTH
T ss_pred             HHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCC--CCCCCc
Confidence            999999999999998 99999999999999975        887764322    224567999999999987  668999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---  231 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---  231 (245)
                      +|||||||++|+|++|..||...+.......+.....     .         .+..+++++.++|.+||+.||.+||   
T Consensus       330 ~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-----~---------~p~~~~~~~~~li~~~L~~dP~~R~~~~  395 (446)
T 4ejn_A          330 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-----R---------FPRTLGPEAKSLLSGLLKKDPKQRLGGG  395 (446)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----C---------CCTTSCHHHHHHHHHHTCSSTTTSTTCS
T ss_pred             cchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC-----C---------CCccCCHHHHHHHHHHcccCHHHhCCCC
Confidence            9999999999999999999998777666666554321     0         1145789999999999999999999   


Q ss_pred             --cHHHHhhccccc
Q 037274          232 --AAEAQVLQEMWH  243 (245)
Q Consensus       232 --t~~~~l~~~~f~  243 (245)
                        +++++++||||.
T Consensus       396 ~~t~~ell~hp~f~  409 (446)
T 4ejn_A          396 SEDAKEIMQHRFFA  409 (446)
T ss_dssp             TTTHHHHHTSGGGT
T ss_pred             CCCHHHHHhCcccc
Confidence              999999999995

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=2.5e-42  Score=274.17  Aligned_cols=205  Identities=19%  Similarity=0.248  Sum_probs=150.6

Q ss_pred             HHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ....+.+|+.+++++. ||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+..
T Consensus        48 ~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~  110 (325)
T 3kn6_A           48 MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK-----------------KKHFSETEASY  110 (325)
T ss_dssp             GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-----------------CSCCCHHHHHH
T ss_pred             hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHh-----------------cCCCCHHHHHH
Confidence            4567889999999997 99999999999999999999999999999776652                 35689999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC----CCCccccccccCceecCCCCCCCc
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ++.|++.||.|||++|++||||||+||+++.           ||.+......    ....+|+.|+|||.+.+  ..++.
T Consensus       111 i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~  188 (325)
T 3kn6_A          111 IMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ--NGYDE  188 (325)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------------------------CCCCH
T ss_pred             HHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcC--CCCCC
Confidence            9999999999999999999999999999953           7766543322    23455899999999987  66899


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCch-------HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDL-------DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                      ++||||||+++|+|++|..||...+..       +....+....   .       .........+++++.++|.+||..|
T Consensus       189 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~---~-------~~~~~~~~~~s~~~~~li~~~L~~d  258 (325)
T 3kn6_A          189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD---F-------SFEGEAWKNVSQEAKDLIQGLLTVD  258 (325)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC---C-------CCCSHHHHTSCHHHHHHHHHHHCCC
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC---C-------CCCcccccCCCHHHHHHHHHHCCCC
Confidence            999999999999999999999864331       2222221111   0       0001111457899999999999999


Q ss_pred             CCCCccHHHHhhccccc
Q 037274          227 PAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       227 p~~Rpt~~~~l~~~~f~  243 (245)
                      |.+|||++++++||||.
T Consensus       259 P~~Rpt~~ell~h~w~~  275 (325)
T 3kn6_A          259 PNKRLKMSGLRYNEWLQ  275 (325)
T ss_dssp             TTTCCCTTTSTTCGGGC
T ss_pred             hhHCCCHHHHhcChhhc
Confidence            99999999999999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=2.2e-41  Score=264.74  Aligned_cols=206  Identities=17%  Similarity=0.255  Sum_probs=167.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      .....+.+.+|+.++++++||||+++++++..    .+..++||||+++++|.+++..                 ...++
T Consensus        65 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~  127 (290)
T 1t4h_A           65 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-----------------FKVMK  127 (290)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHH-----------------HSSCC
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHH-----------------ccCCC
Confidence            45677889999999999999999999999865    3558999999999999777752                 24588


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCC--cccccCCCCceecc-c--------ccCccccccCC--CCccccccccCceecCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEG--LFHKNISAGHILHN-I--------FNDDTRNWISS--SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~--ivH~dlkp~nil~~-~--------f~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~  149 (245)
                      +..++.++.|++.||.|||+.|  ++|+||||+||+++ .        ||.+.......  ...+++.|+|||.+.+   
T Consensus       128 ~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~---  204 (290)
T 1t4h_A          128 IKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE---  204 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT---
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhc---
Confidence            8999999999999999999999  99999999999997 2        66664333222  3456999999998863   


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      .++.++||||||+++|+|++|..||...................           .......++++.+++.+||+.||.+
T Consensus       205 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~  273 (290)
T 1t4h_A          205 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP-----------ASFDKVAIPEVKEIIEGCIRQNKDE  273 (290)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC-----------GGGGGCCCHHHHHHHHHHSCSSGGG
T ss_pred             cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc-----------cccCCCCCHHHHHHHHHHccCChhh
Confidence            48999999999999999999999998865544443333222111           1112456789999999999999999


Q ss_pred             CccHHHHhhccccc
Q 037274          230 RPAAEAQVLQEMWH  243 (245)
Q Consensus       230 Rpt~~~~l~~~~f~  243 (245)
                      |||++++++||||.
T Consensus       274 Rps~~ell~h~~f~  287 (290)
T 1t4h_A          274 RYSIKDLLNHAFFQ  287 (290)
T ss_dssp             SCCHHHHHTSGGGC
T ss_pred             CCCHHHHhhCcccc
Confidence            99999999999996

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=2.2e-41  Score=264.23  Aligned_cols=206  Identities=19%  Similarity=0.220  Sum_probs=168.8

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ......+.+|+..+.++ +||||+++++++.+++..++|+||+++++|.+++..          .   ......+++..+
T Consensus        51 ~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------~---~~~~~~~~~~~~  117 (289)
T 1x8b_A           51 SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE----------N---YRIMSYFKEAEL  117 (289)
T ss_dssp             SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH----------H---HHHTCCCCHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHh----------h---cccccCCCHHHH
Confidence            45677889999999999 899999999999999999999999999999887752          1   111356899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceecc-------------------c--------ccCccccccCCCCccccccc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHN-------------------I--------FNDDTRNWISSSSSITTWAA  139 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~-------------------~--------f~~~~~~~~~~~~~~~~~y~  139 (245)
                      +.++.|++.||.|||++|++|+||||+||+++                   .        ||.+..........+++.|+
T Consensus       118 ~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~  197 (289)
T 1x8b_A          118 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFL  197 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCCCCCGGGC
T ss_pred             HHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccccCCCcccc
Confidence            99999999999999999999999999999996                   1        67666665555667899999


Q ss_pred             cCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHH
Q 037274          140 APEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMV  219 (245)
Q Consensus       140 aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  219 (245)
                      |||.+.+ ...++.++||||||+++|+|++|.+++...   .....+.....       +      ..+..+++++.+++
T Consensus       198 aPE~~~~-~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~~~~~~~~~~~-------~------~~~~~~~~~~~~li  260 (289)
T 1x8b_A          198 ANEVLQE-NYTHLPKADIFALALTVVCAAGAEPLPRNG---DQWHEIRQGRL-------P------RIPQVLSQEFTELL  260 (289)
T ss_dssp             CHHHHTT-CCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---HHHHHHHTTCC-------C------CCSSCCCHHHHHHH
T ss_pred             ChhHhcC-CCCCCchhhHHHHHHHHHHHhcCCCCCcch---hHHHHHHcCCC-------C------CCCcccCHHHHHHH
Confidence            9999975 335678999999999999999999877653   22333222210       0      11256789999999


Q ss_pred             HHhcCCCCCCCccHHHHhhccccc
Q 037274          220 KICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       220 ~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+||+.||.+|||+.++++||||.
T Consensus       261 ~~~l~~dp~~Rps~~~ll~h~~~~  284 (289)
T 1x8b_A          261 KVMIHPDPERRPSAMALVKHSVLL  284 (289)
T ss_dssp             HHHTCSSGGGSCCHHHHHTCTTC-
T ss_pred             HHHhCCCcccCCCHHHHhhChHhh
Confidence            999999999999999999999985

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5e-42  Score=278.79  Aligned_cols=217  Identities=17%  Similarity=0.251  Sum_probs=169.7

Q ss_pred             cHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCc--eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            7 QAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQR--QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      .....+.+.+|+.+++++. ||||+++++++..++  ..++||||+++ +|.+++.                  ...+++
T Consensus        48 ~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~------------------~~~~~~  108 (388)
T 3oz6_A           48 NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIR------------------ANILEP  108 (388)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHHHH------------------HTCCCH
T ss_pred             ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccCc-CHHHHHH------------------cCCCCH
Confidence            4567788999999999997 999999999997554  68999999985 8866664                  235888


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-------------------------CC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-------------------------SS  130 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-------------------------~~  130 (245)
                      ..+..++.|++.||+|||+.|++||||||+|||++.        ||++.....                         ..
T Consensus       109 ~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (388)
T 3oz6_A          109 VHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT  188 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC--------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccccccccccccccccccccccccc
Confidence            899999999999999999999999999999999976        887754321                         11


Q ss_pred             CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCC---C--------
Q 037274          131 SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQV---A--------  199 (245)
Q Consensus       131 ~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~--------  199 (245)
                      ...+|+.|+|||.+.+ ...++.++|||||||++|+|++|++||.+.+.......+............   .        
T Consensus       189 ~~~gt~~y~aPE~~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~  267 (388)
T 3oz6_A          189 DYVATRWYRAPEILLG-STKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMI  267 (388)
T ss_dssp             -CCCGGGGCCHHHHTT-CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHH
T ss_pred             CCcccCCcCCHHHhcC-CCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHH
Confidence            3467999999999875 356899999999999999999999999998877776666543321110000   0        


Q ss_pred             ----------CCCCC------------CCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          200 ----------PNEDT------------THGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       200 ----------~~~~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                                .....            .......++++.+++.+||+.||.+|||++++++||||.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~  333 (388)
T 3oz6_A          268 ESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVS  333 (388)
T ss_dssp             HHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTT
T ss_pred             HhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHH
Confidence                      00000            001126788999999999999999999999999999975

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=2.6e-42  Score=275.61  Aligned_cols=202  Identities=18%  Similarity=0.203  Sum_probs=162.7

Q ss_pred             HHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           13 KLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        13 ~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      ...+|++++.++ +||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+..++.
T Consensus        61 ~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~-----------------~~~~~~~~~~~~~~  123 (342)
T 2qr7_A           61 DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR-----------------QKFFSEREASAVLF  123 (342)
T ss_dssp             CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-----------------CTTCCHHHHHHHHH
T ss_pred             ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH-----------------cCCCCHHHHHHHHH
Confidence            346788888888 799999999999999999999999999999776642                 34689999999999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc------------ccCccccccC----CCCccccccccCceecCCCCCCCchh
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ||+.||.|||++|++||||||+||++..            ||++......    ....+|+.|+|||.+.+  ..++.++
T Consensus       124 qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  201 (342)
T 2qr7_A          124 TITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER--QGYDAAC  201 (342)
T ss_dssp             HHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHH--HHHHHHH
T ss_pred             HHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcC--CCCCCcc
Confidence            9999999999999999999999999732            7776544322    24566999999999986  5588999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCC---chHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQ---DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      |||||||++|+|++|..||....   .......+.....     ...     ......+++++.++|.+||..||.+|||
T Consensus       202 DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~-----~~~-----~~~~~~~s~~~~~li~~~L~~dP~~R~t  271 (342)
T 2qr7_A          202 DIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF-----SLS-----GGYWNSVSDTAKDLVSKMLHVDPHQRLT  271 (342)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCC-----CCC-----STTTTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             CeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCc-----ccC-----ccccccCCHHHHHHHHHHCCCChhHCcC
Confidence            99999999999999999998632   2233333322211     000     0112568899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       272 ~~~il~hp~~~  282 (342)
T 2qr7_A          272 AALVLRHPWIV  282 (342)
T ss_dssp             HHHHTTSHHHH
T ss_pred             HHHHhcCCeec
Confidence            99999999983

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=4.4e-42  Score=286.58  Aligned_cols=206  Identities=21%  Similarity=0.290  Sum_probs=172.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.++++++||||+++++++.+.+..++|+|++.+|+|.+++..                 ...+++..+.
T Consensus        67 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~  129 (484)
T 3nyv_A           67 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-----------------RKRFSEVDAA  129 (484)
T ss_dssp             SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-----------------CSCCBHHHHH
T ss_pred             chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHh-----------------cCCCCHHHHH
Confidence            34567899999999999999999999999999999999999999999766642                 3568999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||.|||++|++||||||+||+++.           ||++.......   ...+|+.|+|||.+.+   .++.
T Consensus       130 ~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~  206 (484)
T 3nyv_A          130 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG---TYDE  206 (484)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT---CCCT
T ss_pred             HHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC---CCCC
Confidence            99999999999999999999999999999942           66655433322   2356999999999874   4889


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++|||||||++|+|++|..||.+.+..+....+........          ......+++++.++|.+||+.||.+|||+
T Consensus       207 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~s~~~~~li~~~L~~dp~~R~s~  276 (484)
T 3nyv_A          207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE----------LPQWKKVSESAKDLIRKMLTYVPSMRISA  276 (484)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----------SGGGGGSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             cceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----------CcccccCCHHHHHHHHHHCCCChhHCcCH
Confidence            99999999999999999999999887777666654431110          01115678999999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      .++++||||.
T Consensus       277 ~e~l~h~~~~  286 (484)
T 3nyv_A          277 RDALDHEWIQ  286 (484)
T ss_dssp             HHHHTSHHHH
T ss_pred             HHHhhChhhc
Confidence            9999999985

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=7.6e-42  Score=286.30  Aligned_cols=204  Identities=24%  Similarity=0.291  Sum_probs=171.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+..+
T Consensus        89 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-----------------~~~~~~~~~~~i  151 (504)
T 3q5i_A           89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN-----------------RHKFDECDAANI  151 (504)
T ss_dssp             THHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHH-----------------cCCCCHHHHHHH
Confidence            457899999999999999999999999999999999999999999766642                 346899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC---CCCccccccccCceecCCCCCCCchh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      +.||+.||.|||+.|++||||||+||+++.           ||++......   ....+|+.|+|||.+.+   .++.++
T Consensus       152 ~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~  228 (504)
T 3q5i_A          152 MKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK---KYNEKC  228 (504)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT---CBCTHH
T ss_pred             HHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc---CCCchH
Confidence            999999999999999999999999999864           7766544332   24567999999999863   489999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||||++|+|++|..||.+.+..+....+........          ......+++++.++|.+||+.||.+|||+++
T Consensus       229 DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e  298 (504)
T 3q5i_A          229 DVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD----------FNDWKNISDEAKELIKLMLTYDYNKRCTAEE  298 (504)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----------ccccCCCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            999999999999999999999887777666654331110          0111457899999999999999999999999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||.
T Consensus       299 ~l~h~~~~  306 (504)
T 3q5i_A          299 ALNSRWIK  306 (504)
T ss_dssp             HHTSHHHH
T ss_pred             HhcCHhhh
Confidence            99999984

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=6.2e-42  Score=280.85  Aligned_cols=206  Identities=13%  Similarity=0.183  Sum_probs=171.4

Q ss_pred             HHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHH
Q 037274           13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKE   92 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q   92 (245)
                      .+.+|+.+++.++||||+++++++.+++..++||||+++|+|.+++..                ....+++..+..++.|
T Consensus       120 ~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~----------------~~~~l~e~~~~~~~~q  183 (437)
T 4aw2_A          120 CFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSK----------------FEDRLPEEMARFYLAE  183 (437)
T ss_dssp             CHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHT----------------TTTCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHH----------------ccCCCCHHHHHHHHHH
Confidence            388999999999999999999999999999999999999999777752                1356899999999999


Q ss_pred             HHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecC---CCCCCCchhh
Q 037274           93 TLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNF---GDDYYSCKSD  156 (245)
Q Consensus        93 i~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~---~~~~~~~~~D  156 (245)
                      ++.||.|||+.||+||||||+|||++.        ||++.......     ...||+.|+|||++..   +...++.++|
T Consensus       184 i~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~D  263 (437)
T 4aw2_A          184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECD  263 (437)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHH
T ss_pred             HHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCe
Confidence            999999999999999999999999975        88775443322     3568999999999872   2356899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC--CccHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK--RPAAE  234 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rpt~~  234 (245)
                      ||||||++|+|++|+.||.+.+..+....+......   ...+.      ....+++++.++|++||..+|++  |++++
T Consensus       264 vwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---~~~p~------~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~  334 (437)
T 4aw2_A          264 WWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER---FQFPT------QVTDVSENAKDLIRRLICSREHRLGQNGIE  334 (437)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH---CCCCS------SCCCSCHHHHHHHHTTSSCGGGCTTTTTTH
T ss_pred             eHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc---ccCCc------ccccCCHHHHHHHHHHhcccccccCCCCHH
Confidence            999999999999999999998877777666542210   01111      11457899999999999988888  99999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       335 eil~Hpff~  343 (437)
T 4aw2_A          335 DFKKHPFFS  343 (437)
T ss_dssp             HHHTSGGGT
T ss_pred             HHhCCCccC
Confidence            999999995

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.8e-41  Score=263.35  Aligned_cols=207  Identities=18%  Similarity=0.228  Sum_probs=167.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.++++++||||+++++++.+++..++|+|++++++|.+++..                 ...+++..+
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~  107 (276)
T 2yex_A           45 AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-----------------DIGMPEPDA  107 (276)
T ss_dssp             CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT-----------------TTBCCHHHH
T ss_pred             chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhh-----------------ccCCCHHHH
Confidence            345678899999999999999999999999999999999999999999666542                 345889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------CCCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------SSSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||.|||+.|++|+||+|+||+++.        ||.+.....      .....+++.|+|||.+.+ ....+
T Consensus       108 ~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~  186 (276)
T 2yex_A          108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-REFHA  186 (276)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTC-SSBCH
T ss_pred             HHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhc-CCCCC
Confidence            999999999999999999999999999999976        666543321      224456899999999975 22347


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHH-HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDI-MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|+|++|..||........ .........     ..       .....+++.+.+++.+||+.||.+||
T Consensus       187 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (276)
T 2yex_A          187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-----YL-------NPWKKIDSAPLALLHKILVENPSARI  254 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT-----TS-------TTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             CcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc-----cc-------CchhhcCHHHHHHHHHHCCCCchhCC
Confidence            899999999999999999999987654322 222221110     00       11156789999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      |++++++||||.
T Consensus       255 s~~~il~~~~~~  266 (276)
T 2yex_A          255 TIPDIKKDRWYN  266 (276)
T ss_dssp             CHHHHTTCTTTT
T ss_pred             CHHHHhcCcccc
Confidence            999999999996

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=4e-42  Score=270.38  Aligned_cols=222  Identities=25%  Similarity=0.413  Sum_probs=160.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.++++++||||+++++++..++..++|+||+++++|.+++...         ..........+++..++
T Consensus        54 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~~~  124 (303)
T 2vwi_A           54 QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHI---------VAKGEHKSGVLDESTIA  124 (303)
T ss_dssp             ------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHH---------HHTTTTTTCSSCHHHHH
T ss_pred             chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHH---------hhccccccCCCCHHHHH
Confidence            456678899999999999999999999999999999999999999998887521         00111123558999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc---------CCCCccccccccCceecCCCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI---------SSSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      .++.|++.||.|||+.|++|+||||+||+++.        ||.+.....         .....+++.|+|||.+.+ ...
T Consensus       125 ~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~  203 (303)
T 2vwi_A          125 TILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ-VRG  203 (303)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHH-HHC
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhcc-ccC
Confidence            99999999999999999999999999999975        554432221         123456899999999864 234


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      ++.++||||||+++|+|++|..||.....................    ...........+++++.+++.+||+.||.+|
T Consensus       204 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  279 (303)
T 2vwi_A          204 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE----TGVQDKEMLKKYGKSFRKMISLCLQKDPEKR  279 (303)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTT----C-----CCCCCCCHHHHHHHHHHCCSSGGGS
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccc----cccccchhhhhhhHHHHHHHHHHccCChhhC
Confidence            789999999999999999999999887666555444332211111    0001111225678999999999999999999


Q ss_pred             ccHHHHhhccccc
Q 037274          231 PAAEAQVLQEMWH  243 (245)
Q Consensus       231 pt~~~~l~~~~f~  243 (245)
                      ||+.++++||||.
T Consensus       280 ps~~~ll~h~~~~  292 (303)
T 2vwi_A          280 PTAAELLRHKFFQ  292 (303)
T ss_dssp             CCHHHHHTSTTC-
T ss_pred             cCHHHHhhChhhh
Confidence            9999999999996

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.4e-41  Score=264.44  Aligned_cols=200  Identities=18%  Similarity=0.231  Sum_probs=167.0

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++..                 ...+++..+..++
T Consensus        53 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~-----------------~~~~~~~~~~~~~  115 (279)
T 3fdn_A           53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----------------LSKFDEQRTATYI  115 (279)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-----------------HSSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHh-----------------cCCCCHHHHHHHH
Confidence            56789999999999999999999999999999999999999999776642                 2458899999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC--CCCccccccccCceecCCCCCCCchhhHHHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      .|++.||.|||+.|++|+||||+||+++.        ||.+......  ....+++.|+|||.+.+  ..++.++|||||
T Consensus       116 ~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~sl  193 (279)
T 3fdn_A          116 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG--RMHDEKVDLWSL  193 (279)
T ss_dssp             HHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCHHHHTT--CCCCTTHHHHHH
T ss_pred             HHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCHhHhcc--CCCCccchhHhH
Confidence            99999999999999999999999999976        6654332222  23456899999999987  568899999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhcc
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE  240 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~  240 (245)
                      |+++|+|++|..||...+.......+.....       .       .+..+++.+.+++.+||+.||.+|||++++++||
T Consensus       194 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~  259 (279)
T 3fdn_A          194 GVLCYEFLVGKPPFEANTYQETYKRISRVEF-------T-------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP  259 (279)
T ss_dssp             HHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-------C-------CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred             HHHHHHHHHCCCCCCCCcHHHHHHHHHhCCC-------C-------CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence            9999999999999998776666555543221       0       1145788999999999999999999999999999


Q ss_pred             ccc
Q 037274          241 MWH  243 (245)
Q Consensus       241 ~f~  243 (245)
                      ||.
T Consensus       260 ~~~  262 (279)
T 3fdn_A          260 WIT  262 (279)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            985

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=7.8e-41  Score=263.78  Aligned_cols=214  Identities=16%  Similarity=0.227  Sum_probs=166.3

Q ss_pred             HHHHHHHHHHhhC---CCCCeeeEEEEEEeCc-----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           12 AKLAREIYRYKHL---SHPNIIPIYKTMISQR-----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        12 ~~~~~E~~~l~~l---~h~~Iv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ..+.+|+.+++++   +||||+++++++....     ..++++|++. ++|.+++..               .....+++
T Consensus        56 ~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---------------~~~~~~~~  119 (308)
T 3g33_A           56 ISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDK---------------APPPGLPA  119 (308)
T ss_dssp             HHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHT---------------CCTTCSCH
T ss_pred             hhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhh---------------ccCCCCCH
Confidence            4566777777766   4999999999997755     4899999998 499766653               22344899


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.++.|++.||+|||++|++|+||||+||+++.        ||.+.......   ...+|+.|+|||.+.+  ..++
T Consensus       120 ~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~  197 (308)
T 3g33_A          120 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQ--STYA  197 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHT--SCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCccccccccCchHHcC--CCCC
Confidence            999999999999999999999999999999999975        77765443322   3456999999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCC-------------CCCCCCcccccHHHHHHH
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPN-------------EDTTHGTRTLSKNFWNMV  219 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~li  219 (245)
                      .++|||||||++|+|++|..||.+.+..+....+............+..             .........+++.+.++|
T Consensus       198 ~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  277 (308)
T 3g33_A          198 TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLL  277 (308)
T ss_dssp             STHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHH
Confidence            9999999999999999999999998887777666554322111111000             000011245788999999


Q ss_pred             HHhcCCCCCCCccHHHHhhccccc
Q 037274          220 KICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       220 ~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+||+.||.+|||+.++++||||.
T Consensus       278 ~~~L~~dP~~R~t~~e~l~h~~~~  301 (308)
T 3g33_A          278 LEMLTFNPHKRISAFRALQHSYLH  301 (308)
T ss_dssp             HHHTCSSTTTSCCHHHHHTSTTC-
T ss_pred             HHHhcCCCccCCCHHHHhcCcccc
Confidence            999999999999999999999996

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.5e-41  Score=270.42  Aligned_cols=219  Identities=19%  Similarity=0.300  Sum_probs=169.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.++...                 ...+++..+
T Consensus        64 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----------------~~~~~~~~~  126 (331)
T 4aaa_A           64 DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF-----------------PNGLDYQVV  126 (331)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHS-----------------TTCCCHHHH
T ss_pred             chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhh-----------------ccCCCHHHH
Confidence            445667788999999999999999999999999999999999999888665431                 345889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||.|||+.|++|+||||+||+++.        ||.+......    ....+++.|+|||.+.+ ...++.+
T Consensus       127 ~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~  205 (331)
T 4aaa_A          127 QKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVG-DVKYGKA  205 (331)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTT-CTTCCTH
T ss_pred             HHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccC-CCCcchH
Confidence            999999999999999999999999999999975        7766543322    23456999999999975 3468999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCC--------------ccCCCCC---CCCCCCCcccccHHHHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKS--------------TSLQVAP---NEDTTHGTRTLSKNFWN  217 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~---~~~~~~~~~~~~~~~~~  217 (245)
                      +||||||+++|+|++|..||...+..+....+.......              .....+.   ..........+++.+.+
T Consensus       206 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  285 (331)
T 4aaa_A          206 VDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVID  285 (331)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHH
Confidence            999999999999999999999877766554443321110              0000000   00001111357899999


Q ss_pred             HHHHhcCCCCCCCccHHHHhhccccc
Q 037274          218 MVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++.+||+.||.+|||++++++||||.
T Consensus       286 li~~~L~~dP~~Rpt~~ell~hp~f~  311 (331)
T 4aaa_A          286 LAKKCLHIDPDKRPFCAELLHHDFFQ  311 (331)
T ss_dssp             HHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             HHHHHhccCcccCCCHHHHhcCchhc
Confidence            99999999999999999999999996

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-41  Score=271.85  Aligned_cols=217  Identities=19%  Similarity=0.270  Sum_probs=171.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      .....+.+.+|++++++++||||+++++++..++      ..++|||++ +++|.+++..                  ..
T Consensus        64 ~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~------------------~~  124 (367)
T 1cm8_A           64 SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH------------------EK  124 (367)
T ss_dssp             SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH------------------CC
T ss_pred             CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc------------------CC
Confidence            4456788999999999999999999999997653      469999999 6799776642                  45


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +++..+..++.|++.||.|||++|++||||||+||+++.        ||++....... ...+|+.|+|||.+.+ ...+
T Consensus       125 l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~-~~~~  203 (367)
T 1cm8_A          125 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILN-WMRY  203 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHT-TTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhC-CCCC
Confidence            888999999999999999999999999999999999976        77776544322 3466999999999875 3458


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc-----------------CCCCCCCCCCCCcccccHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS-----------------LQVAPNEDTTHGTRTLSKN  214 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~  214 (245)
                      +.++|||||||++|+|++|+.||.+.+..+....+.........                 ................++.
T Consensus       204 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (367)
T 1cm8_A          204 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPL  283 (367)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHH
T ss_pred             ChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHH
Confidence            99999999999999999999999988776666655443211100                 0000000111112456889


Q ss_pred             HHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          215 FWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       215 ~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.+++.+||+.||.+|||++++++||||.
T Consensus       284 ~~~ll~~mL~~dP~~R~t~~e~l~hp~f~  312 (367)
T 1cm8_A          284 AVNLLEKMLVLDAEQRVTAGEALAHPYFE  312 (367)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHSGGGT
T ss_pred             HHHHHHHHccCChhHCCCHHHHhcChHHH
Confidence            99999999999999999999999999985

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=5.7e-41  Score=270.71  Aligned_cols=218  Identities=17%  Similarity=0.251  Sum_probs=171.7

Q ss_pred             ccHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            6 HQAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ...+..+.+.+|+.+++++ +||||+++++++..++..++||||+++|+|.+++.............. .......+++.
T Consensus       125 ~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~  203 (370)
T 2psq_A          125 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI-NRVPEEQMTFK  203 (370)
T ss_dssp             CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC------------CCCCCCHH
T ss_pred             cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccc-cccccccCCHH
Confidence            3566788899999999999 899999999999999999999999999999998875432211110111 11123468899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~  150 (245)
                      .+..++.||+.||.|||++|++||||||+|||++.        ||++.......      ...+++.|+|||.+.+  ..
T Consensus       204 ~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~  281 (370)
T 2psq_A          204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD--RV  281 (370)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT--CC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcC--CC
Confidence            99999999999999999999999999999999975        77776443221      2334788999999987  66


Q ss_pred             CCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      ++.++|||||||++|+|++ |..||.+.........+.....      .       ..+..++.++.+++.+||+.||.+
T Consensus       282 ~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~l~~li~~~l~~dP~~  348 (370)
T 2psq_A          282 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR------M-------DKPANCTNELYMMMRDCWHAVPSQ  348 (370)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC------C-------CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC------C-------CCCCCCCHHHHHHHHHHcCCChhh
Confidence            9999999999999999999 9999988776666555443321      1       111567889999999999999999


Q ss_pred             CccHHHHhhc
Q 037274          230 RPAAEAQVLQ  239 (245)
Q Consensus       230 Rpt~~~~l~~  239 (245)
                      |||+.+++++
T Consensus       349 Rpt~~ell~~  358 (370)
T 2psq_A          349 RPTFKQLVED  358 (370)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=6.6e-42  Score=272.35  Aligned_cols=207  Identities=19%  Similarity=0.265  Sum_probs=160.5

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc---------------------------------------------
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR---------------------------------------------   40 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~---------------------------------------------   40 (245)
                      ......+.+.+|+.++++++||||+++++++.+.+                                             
T Consensus        43 ~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (332)
T 3qd2_B           43 NRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKN  122 (332)
T ss_dssp             STTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-----------------------------------
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCccc
Confidence            44557788999999999999999999999986543                                             


Q ss_pred             ------------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccc
Q 037274           41 ------------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHK  108 (245)
Q Consensus        41 ------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~  108 (245)
                                  ..+++|||+++++|.+++....              .....++..++.++.|++.||+|||++|++||
T Consensus       123 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~  188 (332)
T 3qd2_B          123 TVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--------------SLEDREHGVCLHIFIQIAEAVEFLHSKGLMHR  188 (332)
T ss_dssp             ---------CCCEEEEEEECCCSSCHHHHHHTCC--------------SGGGSCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             ccccccCCCCCceEEEEEEecCCCCHHHHHhccc--------------CccchhhHHHHHHHHHHHHHHHHHHhCCeeec
Confidence                        2799999999999988776321              11234566788999999999999999999999


Q ss_pred             cCCCCceeccc--------ccCccccccC----------------CCCccccccccCceecCCCCCCCchhhHHHHHHHH
Q 037274          109 NISAGHILHNI--------FNDDTRNWIS----------------SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITA  164 (245)
Q Consensus       109 dlkp~nil~~~--------f~~~~~~~~~----------------~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l  164 (245)
                      ||||+||+++.        ||.+......                ....+|+.|+|||.+.+  ..++.++||||||+++
T Consensus       189 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il  266 (332)
T 3qd2_B          189 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHG--NNYSHKVDIFSLGLIL  266 (332)
T ss_dssp             CCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHC--CCCCTHHHHHHHHHHH
T ss_pred             CCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcC--CCCcchhhHHHHHHHH
Confidence            99999999985        7776554332                22457999999999987  5689999999999999


Q ss_pred             HHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          165 LQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       165 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      |+|++|..|+...  ....... ...      ..+      ......++++.+++.+||+.||.+|||++++++||||+
T Consensus       267 ~el~~~~~~~~~~--~~~~~~~-~~~------~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~  330 (332)
T 3qd2_B          267 FELLYSFSTQMER--VRIITDV-RNL------KFP------LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFE  330 (332)
T ss_dssp             HHHHSCCCCHHHH--HHHHHHH-HTT------CCC------HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCC
T ss_pred             HHHHHcCCChhHH--HHHHHHh-hcc------CCC------cccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhh
Confidence            9999987764321  1111111 111      000      01144567889999999999999999999999999996

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=5.2e-41  Score=264.30  Aligned_cols=205  Identities=20%  Similarity=0.230  Sum_probs=168.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++.+.+..++|+|++++++|.+++..                 ...+++..+..+
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~  111 (304)
T 2jam_A           49 RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE-----------------RGVYTEKDASLV  111 (304)
T ss_dssp             ---HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-----------------HSCCCHHHHHHH
T ss_pred             chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHH-----------------cCCCCHHHHHHH
Confidence            456789999999999999999999999999999999999999999776642                 245889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceec---cc--------ccCccccccCC--CCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILH---NI--------FNDDTRNWISS--SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~---~~--------f~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||.|||+.|++|+||||+||++   +.        ||.+.......  ...+++.|+|||.+.+  ..++.++|
T Consensus       112 ~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  189 (304)
T 2jam_A          112 IQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQ--KPYSKAVD  189 (304)
T ss_dssp             HHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSS--CSCCHHHH
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccChHHhcc--CCCCchhh
Confidence            9999999999999999999999999998   32        66654333221  2346899999999987  66899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ  236 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~  236 (245)
                      |||||+++|+|++|..||...........+.......     +     ......+++++.++|.+||..||.+|||++++
T Consensus       190 i~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~-----~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~  259 (304)
T 2jam_A          190 CWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEF-----E-----SPFWDDISESAKDFICHLLEKDPNERYTCEKA  259 (304)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCC-----C-----TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC-----C-----ccccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            9999999999999999999877666655554432110     0     01125678999999999999999999999999


Q ss_pred             hhccccc
Q 037274          237 VLQEMWH  243 (245)
Q Consensus       237 l~~~~f~  243 (245)
                      ++||||.
T Consensus       260 l~h~~~~  266 (304)
T 2jam_A          260 LSHPWID  266 (304)
T ss_dssp             HTSHHHH
T ss_pred             hcCcccc
Confidence            9999985

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=5.4e-42  Score=280.92  Aligned_cols=207  Identities=19%  Similarity=0.206  Sum_probs=158.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+.+|+.++++++||||+++++++. .+..++||||+++|+|.+++..                 ...+++..+..+
T Consensus       183 ~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~-----------------~~~~~~~~~~~i  244 (419)
T 3i6u_A          183 PALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVG-----------------NKRLKEATCKLY  244 (419)
T ss_dssp             --CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEEECCTTCBGGGGTSS-----------------SCCCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEEEcCCCCcHHHHHhc-----------------cCCCCHHHHHHH
Confidence            3446889999999999999999999875 4558999999999999665532                 356899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecC-CCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNF-GDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~~~  154 (245)
                      +.|++.||+|||++|++||||||+|||++.           ||++.......   ...+|+.|+|||.+.+ +...++.+
T Consensus       245 ~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  324 (419)
T 3i6u_A          245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA  324 (419)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHH
T ss_pred             HHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCch
Confidence            999999999999999999999999999953           77776544322   4457999999999863 23567899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||....................         .......+++.+.++|.+||+.||.+|||++
T Consensus       325 ~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~  395 (419)
T 3i6u_A          325 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF---------IPEVWAEVSEKALDLVKKLLVVDPKARFTTE  395 (419)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCC---------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             hhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCC---------CchhhcccCHHHHHHHHHHccCChhHCcCHH
Confidence            9999999999999999999987544433332222221100         0011145789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       396 e~l~hp~~~  404 (419)
T 3i6u_A          396 EALRHPWLQ  404 (419)
T ss_dssp             HHHHSGGGC
T ss_pred             HHhCCcccC
Confidence            999999995

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=3.2e-41  Score=271.79  Aligned_cols=208  Identities=18%  Similarity=0.253  Sum_probs=170.8

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+.+.+|+.+++++ +||||+++++++...+..++||||+++++|.+++..                 ...+++..+.
T Consensus       141 ~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-----------------~~~l~~~~~~  203 (365)
T 2y7j_A          141 EVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE-----------------KVALSEKETR  203 (365)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHH-----------------HSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHh-----------------cCCCCHHHHH
Confidence            3466789999999999 799999999999999999999999999999776642                 2468899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCC----CCCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFG----DDYYS  152 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~----~~~~~  152 (245)
                      .++.|++.||.|||+.|++|+||||+||+++.        ||.+......   ....+|+.|+|||.+.+.    ...++
T Consensus       204 ~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  283 (365)
T 2y7j_A          204 SIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYG  283 (365)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBC
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCC
Confidence            99999999999999999999999999999976        7766544322   245679999999998642    23578


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++||||||+++|+|++|..||...........+........          .......+..+.++|.+||+.||.+|||
T Consensus       284 ~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~li~~~L~~dP~~Rps  353 (365)
T 2y7j_A          284 KEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFS----------SPEWDDRSSTVKDLISRLLQVDPEARLT  353 (365)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----------HHHHSSSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             chhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----------CcccccCCHHHHHHHHHHcCCChhHCcC
Confidence            899999999999999999999988766665555443321100          0011456889999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       354 ~~ell~hp~f~  364 (365)
T 2y7j_A          354 AEQALQHPFFE  364 (365)
T ss_dssp             HHHHHHSGGGC
T ss_pred             HHHHhcCcccC
Confidence            99999999996

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=2.6e-41  Score=263.53  Aligned_cols=200  Identities=18%  Similarity=0.210  Sum_probs=168.8

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|+.++++++||||+++++++.+++..++|+|++++++|.+++..                 ...+++..+..++
T Consensus        58 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~~  120 (284)
T 2vgo_A           58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-----------------HGRFDEQRSATFM  120 (284)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-----------------HSSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHh-----------------cCCCCHHHHHHHH
Confidence            46789999999999999999999999999999999999999999776652                 2358899999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc--CCCCccccccccCceecCCCCCCCchhhHHHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI--SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      .|++.||.|||++|++|+||||+||+++.        ||.+.....  .....+++.|+|||.+.+  ..++.++|||||
T Consensus       121 ~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~sl  198 (284)
T 2vgo_A          121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEG--KTHDEKVDLWCA  198 (284)
T ss_dssp             HHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTT--CCBCTTHHHHHH
T ss_pred             HHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCHHHhcc--CCCCcccchhhH
Confidence            99999999999999999999999999975        665543322  224456999999999987  568899999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhcc
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE  240 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~  240 (245)
                      |+++|+|++|..||...........+.....              ..+..++.++.++|.+||+.||.+|||++++++||
T Consensus       199 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~  264 (284)
T 2vgo_A          199 GVLCYEFLVGMPPFDSPSHTETHRRIVNVDL--------------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP  264 (284)
T ss_dssp             HHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--------------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred             HHHHHHHHHCCCCCCCCCHhHHHHHHhcccc--------------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence            9999999999999998776665554443211              01145789999999999999999999999999999


Q ss_pred             ccc
Q 037274          241 MWH  243 (245)
Q Consensus       241 ~f~  243 (245)
                      ||.
T Consensus       265 ~~~  267 (284)
T 2vgo_A          265 WVK  267 (284)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            985

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2e-41  Score=280.54  Aligned_cols=215  Identities=17%  Similarity=0.227  Sum_probs=163.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      .....+.+.+|+.+++.++||||+++++++...      +..++||||++++ |.+.+.                   ..
T Consensus       101 ~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l~~~~~-------------------~~  160 (464)
T 3ttj_A          101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQ-------------------ME  160 (464)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHHT-------------------SC
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCC-HHHHHh-------------------hc
Confidence            456778899999999999999999999999654      3579999999874 533332                   24


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~  149 (245)
                      +++..+..++.|++.||.|||+.||+||||||+|||++.        ||++......   ....+|+.|+|||.+.+  .
T Consensus       161 l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~  238 (464)
T 3ttj_A          161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--M  238 (464)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTT--C
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcC--C
Confidence            788999999999999999999999999999999999986        8877655433   23567999999999987  5


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC--------------CCCCCCC---CCCC-----
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL--------------QVAPNED---TTHG-----  207 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~---~~~~-----  207 (245)
                      .++.++|||||||++|+|++|+.||.+.+..+....+..........              ..+....   ....     
T Consensus       239 ~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (464)
T 3ttj_A          239 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLF  318 (464)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGS
T ss_pred             CCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccccc
Confidence            78999999999999999999999999988777666665433211000              0000000   0000     


Q ss_pred             ------cccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          208 ------TRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       208 ------~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                            ....++++.+||.+||..||.+|||++++++||||.
T Consensus       319 ~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~  360 (464)
T 3ttj_A          319 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN  360 (464)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             ccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence                  011256799999999999999999999999999996

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.2e-42  Score=274.45  Aligned_cols=213  Identities=16%  Similarity=0.198  Sum_probs=165.6

Q ss_pred             HHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHH
Q 037274           13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKE   92 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q   92 (245)
                      .+.+|+.++++++||||+++++++.+++..++||||+++ +|.+++..                ....+++..+..++.|
T Consensus        46 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----------------~~~~~~~~~~~~~~~q  108 (324)
T 3mtl_A           46 TAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDD----------------CGNIINMHNVKLFLFQ  108 (324)
T ss_dssp             CCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHH----------------TTTCCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHh----------------cCCCCCHHHHHHHHHH
Confidence            456799999999999999999999999999999999985 88665542                1345889999999999


Q ss_pred             HHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhHHHH
Q 037274           93 TLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        93 i~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      ++.||.|||+.|++||||||+||+++.        ||.+.......    ...+|+.|+|||.+.+ ...++.++|||||
T Consensus       109 i~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~Diwsl  187 (324)
T 3mtl_A          109 LLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG-STDYSTQIDMWGV  187 (324)
T ss_dssp             HHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTT-CCCCCTHHHHHHH
T ss_pred             HHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcC-CCCCCcHHHHHHH
Confidence            999999999999999999999999975        66654333221    3355999999999875 3568999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCC----------------CCCCCcccccHHHHHHHHHhcC
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNE----------------DTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      |+++|+|++|..||.+.+..+....+............+...                ........+++++.+++.+||+
T Consensus       188 G~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  267 (324)
T 3mtl_A          188 GCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQ  267 (324)
T ss_dssp             HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcC
Confidence            999999999999999988777766665543221111111000                0001113568899999999999


Q ss_pred             CCCCCCccHHHHhhccccc
Q 037274          225 PDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .||.+|||++++++||||.
T Consensus       268 ~dP~~R~t~~e~l~hp~f~  286 (324)
T 3mtl_A          268 FEGRNRISAEDAMKHPFFL  286 (324)
T ss_dssp             SSGGGSCCHHHHTTSGGGG
T ss_pred             cCcccCCCHHHHhcChhhh
Confidence            9999999999999999995

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.6e-41  Score=268.65  Aligned_cols=214  Identities=19%  Similarity=0.247  Sum_probs=170.4

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      +.+.+|+.++++++||||+++++++...+..++|+||+++ +|.+++..                ....+++..+..++.
T Consensus        57 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----------------~~~~~~~~~~~~~~~  119 (346)
T 1ua2_A           57 RTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKD----------------NSLVLTPSHIKAYML  119 (346)
T ss_dssp             THHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTT----------------CCSSCCSSHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHh----------------cCcCCCHHHHHHHHH
Confidence            4688999999999999999999999999999999999997 78665542                134588899999999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhHHH
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      |++.||.|||++|++||||||+||+++.        ||.+......    ....+|+.|+|||.+.+ ...++.++||||
T Consensus       120 qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~Diws  198 (346)
T 1ua2_A          120 MTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG-ARMYGVGVDMWA  198 (346)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTT-CSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhC-CCCCCchhhhHh
Confidence            9999999999999999999999999976        7776544322    23456999999999875 345889999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCC------CC--------CCCcccccHHHHHHHHHhcCC
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNE------DT--------THGTRTLSKNFWNMVKICLAP  225 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--------~~~~~~~~~~~~~li~~~l~~  225 (245)
                      |||++|+|++|.+||.+.+..+....+............+...      ..        ......+++++.++|.+||+.
T Consensus       199 lG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  278 (346)
T 1ua2_A          199 VGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLF  278 (346)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhcc
Confidence            9999999999999999988777777666543221111110000      00        001145678999999999999


Q ss_pred             CCCCCccHHHHhhccccc
Q 037274          226 DPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       226 ~p~~Rpt~~~~l~~~~f~  243 (245)
                      ||.+|||++++++||||.
T Consensus       279 dP~~Rpt~~ell~h~~f~  296 (346)
T 1ua2_A          279 NPCARITATQALKMKYFS  296 (346)
T ss_dssp             STTTSCCHHHHHTSGGGT
T ss_pred             ChhhCCCHHHHhcChhhh
Confidence            999999999999999995

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.9e-41  Score=273.24  Aligned_cols=202  Identities=18%  Similarity=0.194  Sum_probs=162.7

Q ss_pred             HHHHHHHHHHHH-HhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYR-YKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~-l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+.+.+|..+ ++.++||||+++++++.+.+..|+||||+++|+|.+++..                 ...+++..++
T Consensus        80 ~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-----------------~~~~~~~~~~  142 (373)
T 2r5t_A           80 KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR-----------------ERCFLEPRAR  142 (373)
T ss_dssp             -----------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-----------------HSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHh-----------------cCCCCHHHHH
Confidence            455667788877 5778999999999999999999999999999999776642                 2458889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.||+.||.|||++|++||||||+|||++.        ||+++....    .....||+.|+|||.+.+  ..++.++
T Consensus       143 ~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~  220 (373)
T 2r5t_A          143 FYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK--QPYDRTV  220 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTT--CCCCTHH
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCC--CCCCchh
Confidence            99999999999999999999999999999975        887764322    234567999999999987  6689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH--
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA--  233 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~--  233 (245)
                      |+|||||++|+|++|..||.+.+..+....+.....     .         .+..++..+.++|.+||+.||.+||++  
T Consensus       221 DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-----~---------~~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          221 DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-----Q---------LKPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC-----C---------CCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             hhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-----C---------CCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            999999999999999999998877777666654321     1         114578999999999999999999986  


Q ss_pred             --HHHhhccccc
Q 037274          234 --EAQVLQEMWH  243 (245)
Q Consensus       234 --~~~l~~~~f~  243 (245)
                        +++++||||.
T Consensus       287 ~~~~i~~h~~f~  298 (373)
T 2r5t_A          287 DFMEIKSHVFFS  298 (373)
T ss_dssp             THHHHHTSGGGT
T ss_pred             CHHHHhCCcccc
Confidence              6899999995

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=3.4e-41  Score=283.06  Aligned_cols=204  Identities=17%  Similarity=0.174  Sum_probs=168.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+.+..++||||+++|+|.+++..               .....+++..+..+
T Consensus       227 ~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~---------------~~~~~l~e~~~~~i  291 (576)
T 2acx_A          227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH---------------MGQAGFPEARAVFY  291 (576)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHS---------------SSSCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHh---------------cCCCCCCHHHHHHH
Confidence            356688999999999999999999999999999999999999999666642               22345899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      +.||+.||.|||++||+||||||+|||++.        ||++......   ....||+.|+|||.+.+  ..++.++|+|
T Consensus       292 ~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~--~~~~~~~Diw  369 (576)
T 2acx_A          292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN--ERYTFSPDWW  369 (576)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTT--CEESSHHHHH
T ss_pred             HHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccCHHHHcC--CCCCccchHH
Confidence            999999999999999999999999999976        8877654332   24567999999999987  5689999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCch---HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc----
Q 037274          159 LIGITALQFPCGGLPVSRRQDL---DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP----  231 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----  231 (245)
                      ||||++|+|++|..||......   ...........      .       ..+..+++++.++|.+||+.||.+||    
T Consensus       370 SLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~------~-------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~  436 (576)
T 2acx_A          370 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP------E-------EYSERFSPQARSLCSQLLCKDPAERLGCRG  436 (576)
T ss_dssp             HHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC------C-------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSS
T ss_pred             HHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc------c-------cCCccCCHHHHHHHHHhccCCHHHcCCCCC
Confidence            9999999999999999875432   22222222211      0       11156789999999999999999999    


Q ss_pred             -cHHHHhhccccc
Q 037274          232 -AAEAQVLQEMWH  243 (245)
Q Consensus       232 -t~~~~l~~~~f~  243 (245)
                       +++++++||||.
T Consensus       437 ~sa~eil~HpfF~  449 (576)
T 2acx_A          437 GSAREVKEHPLFK  449 (576)
T ss_dssp             SHHHHHHTSGGGT
T ss_pred             CCHHHHHhChhhc
Confidence             899999999996

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=1.3e-41  Score=273.67  Aligned_cols=219  Identities=20%  Similarity=0.293  Sum_probs=168.3

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ......+.+.+|+.++++++||||+++++++.+++..++||||+++++|.+++..                 ...+++..
T Consensus        70 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~  132 (360)
T 3eqc_A           70 IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-----------------AGRIPEQI  132 (360)
T ss_dssp             CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH-----------------HSSCCHHH
T ss_pred             cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHH-----------------cCCCCHHH
Confidence            3566778899999999999999999999999999999999999999999777752                 24588999


Q ss_pred             HHHHHHHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCcccccc--CCCCccccccccCceecCCCCCCCch
Q 037274           86 LAIAHKETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWI--SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +..++.|++.||.|||+. |++|+||||+||+++.        ||.+.....  .....+|+.|+|||.+.+  ..++.+
T Consensus       133 ~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  210 (360)
T 3eqc_A          133 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG--THYSVQ  210 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTT--CCCSHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcC--CCCCch
Confidence            999999999999999996 9999999999999975        666543221  224467999999999987  668999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCC------------------------------CCCCC
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVA------------------------------PNEDT  204 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~  204 (245)
                      +||||||+++|+|++|..||...+.....................                              .....
T Consensus       211 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (360)
T 3eqc_A          211 SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPP  290 (360)
T ss_dssp             HHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCC
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCC
Confidence            999999999999999999998765544322111000000000000                              00000


Q ss_pred             CCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          205 THGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       205 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ......++.++.++|.+||+.||.+|||++++++||||.
T Consensus       291 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  329 (360)
T 3eqc_A          291 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  329 (360)
T ss_dssp             CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence            111245788999999999999999999999999999985

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-41  Score=274.24  Aligned_cols=212  Identities=14%  Similarity=0.218  Sum_probs=172.1

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ...+....+.+|+.++++++||||+++++++..++..++||||+++|+|.+++.....          .......+++..
T Consensus       113 ~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------~~~~~~~~~~~~  182 (367)
T 3l9p_A          113 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP----------RPSQPSSLAMLD  182 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSC----------CSSSCCCCCHHH
T ss_pred             cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhcc----------ccCccccccHHH
Confidence            3566777899999999999999999999999999999999999999999888763211          111234688999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCcccccc------CCCCccccccccCceecCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWI------SSSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~------~~~~~~~~~y~aPE~~~~~~  148 (245)
                      ++.++.|++.||.|||++|++||||||+|||++.           ||++.....      .....+|+.|+|||.+.+  
T Consensus       183 ~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--  260 (367)
T 3l9p_A          183 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFME--  260 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcC--
Confidence            9999999999999999999999999999999973           665543211      112345889999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++|||||||++|+|++ |..||...........+.....      ..       .+..++..+.+++.+||+.||
T Consensus       261 ~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~------~~-------~~~~~~~~l~~li~~~l~~dP  327 (367)
T 3l9p_A          261 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR------MD-------PPKNCPGPVYRIMTQCWQHQP  327 (367)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC------CC-------CCTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC------CC-------CCccCCHHHHHHHHHHcCCCH
Confidence            568999999999999999998 9999998777666655544321      11       115678899999999999999


Q ss_pred             CCCccHHHHhhcccc
Q 037274          228 AKRPAAEAQVLQEMW  242 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~f  242 (245)
                      .+|||+.+++++.++
T Consensus       328 ~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          328 EDRPNFAIILERIEY  342 (367)
T ss_dssp             GGSCCHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHH
Confidence            999999999987653

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=6e-41  Score=277.93  Aligned_cols=218  Identities=16%  Similarity=0.259  Sum_probs=159.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC-----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ-----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      .....+.+.+|+.+|++++||||+++++++...     +..|+|||++. ++|.+++..                 ...+
T Consensus        92 ~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----------------~~~l  153 (458)
T 3rp9_A           92 DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRT-----------------PVYL  153 (458)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHS-----------------SCCC
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cchhhhccc-----------------CCCC
Confidence            456778899999999999999999999998443     56899999986 588666642                 3568


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------------------------
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------------------------  129 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------------------------  129 (245)
                      ++..++.++.||+.||.|||+.||+||||||+|||++.        ||++......                        
T Consensus       154 ~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (458)
T 3rp9_A          154 TELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT  233 (458)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC----------------
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCcccccccccccccc
Confidence            99999999999999999999999999999999999976        8877654321                        


Q ss_pred             -------CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhh-----------CCCCCCCCCc------------
Q 037274          130 -------SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC-----------GGLPVSRRQD------------  179 (245)
Q Consensus       130 -------~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~-----------g~~p~~~~~~------------  179 (245)
                             ....+|+.|+|||++.. ...++.++|||||||++|||++           |+++|.+...            
T Consensus       234 ~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~  312 (458)
T 3rp9_A          234 KNLKRQLTGHVVTRWYRAPELILL-QENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGND  312 (458)
T ss_dssp             -----------CCCTTCCHHHHTT-CCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC----------------
T ss_pred             ccccccccCCcccccccChHHhhC-CCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCcccccccccccccc
Confidence                   12355999999998753 3568999999999999999998           6677755331            


Q ss_pred             --------hHHHHHHHhcCCCCc-----------------cCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          180 --------LDIMTKMLMKQPKST-----------------SLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       180 --------~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                              .+.+..+........                 .................++++.+||.+||..||.+|||++
T Consensus       313 ~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~  392 (458)
T 3rp9_A          313 FKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITIN  392 (458)
T ss_dssp             ----CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             ccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHH
Confidence                    111111111110000                 0000000000111144688999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       393 e~L~Hp~f~  401 (458)
T 3rp9_A          393 ECLAHPFFK  401 (458)
T ss_dssp             HHHHSGGGT
T ss_pred             HHhcCHhhh
Confidence            999999995

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.2e-41  Score=268.57  Aligned_cols=208  Identities=17%  Similarity=0.227  Sum_probs=163.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCC--CCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSH--PNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h--~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+..+.+.+|+.++++++|  +||+++++++.+++..++||| +.+++|.+++..                 ...+++.
T Consensus        47 ~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~-----------------~~~~~~~  108 (343)
T 3dbq_A           47 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK-----------------KKSIDPW  108 (343)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHH-----------------SCCCCHH
T ss_pred             chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHh-----------------cCCCCHH
Confidence            45567889999999999986  999999999999999999999 556799776652                 3568899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-------ccCccccccCC------CCccccccccCceecC-----
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------FNDDTRNWISS------SSSITTWAAAPEVVNF-----  146 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------f~~~~~~~~~~------~~~~~~~y~aPE~~~~-----  146 (245)
                      .+..++.|++.||.|||+.|++||||||+|||++.       ||++.......      ...+|+.|+|||.+.+     
T Consensus       109 ~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  188 (343)
T 3dbq_A          109 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR  188 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC---
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccc
Confidence            99999999999999999999999999999999875       88776543322      3457999999999863     


Q ss_pred             ----CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCch-HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHH
Q 037274          147 ----GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL-DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       147 ----~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  221 (245)
                          +...++.++|||||||++|+|++|..||...... ...........            ....+...+.++.+++.+
T Consensus       189 ~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~li~~  256 (343)
T 3dbq_A          189 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH------------EIEFPDIPEKDLQDVLKC  256 (343)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS------------CCCCCCCSCHHHHHHHHH
T ss_pred             cccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCc------------ccCCcccCCHHHHHHHHH
Confidence                1245889999999999999999999999874433 22222221110            011124467889999999


Q ss_pred             hcCCCCCCCccHHHHhhcccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWHF  244 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~~  244 (245)
                      ||+.||.+|||+.++++||||..
T Consensus       257 ~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          257 CLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             HcCCChhHCCCHHHHHhCccccc
Confidence            99999999999999999999863

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-41  Score=276.56  Aligned_cols=207  Identities=14%  Similarity=0.181  Sum_probs=169.4

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|+.++.+++||||+++++++.+++..|+||||+++|+|.+++..                .+..+++..++.++
T Consensus       105 ~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~----------------~~~~l~~~~~~~~~  168 (412)
T 2vd5_A          105 VSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK----------------FGERIPAEMARFYL  168 (412)
T ss_dssp             GCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH----------------HSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHh----------------cCCCCCHHHHHHHH
Confidence            34588999999999999999999999999999999999999999777642                12468999999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecC-----CCCCCC
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNF-----GDDYYS  152 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~-----~~~~~~  152 (245)
                      .||+.||.|||+.||+||||||+|||++.        ||++.......     ...||+.|+|||.+..     +...++
T Consensus       169 ~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~  248 (412)
T 2vd5_A          169 AEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYG  248 (412)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEEC
T ss_pred             HHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCC
Confidence            99999999999999999999999999976        88776543322     3468999999999872     124588


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC--
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR--  230 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R--  230 (245)
                      .++|+|||||++|+|++|+.||.+.+..+....+......   ...+.      ....+++++.++|.+||. +|.+|  
T Consensus       249 ~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~---~~~p~------~~~~~s~~~~dli~~lL~-~p~~Rlg  318 (412)
T 2vd5_A          249 PECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH---LSLPL------VDEGVPEEARDFIQRLLC-PPETRLG  318 (412)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH---CCCC----------CCCHHHHHHHHTTSS-CGGGCTT
T ss_pred             hHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC---cCCCc------cccCCCHHHHHHHHHHcC-ChhhcCC
Confidence            9999999999999999999999988777766666542100   01110      114688999999999999 99998  


Q ss_pred             -ccHHHHhhccccc
Q 037274          231 -PAAEAQVLQEMWH  243 (245)
Q Consensus       231 -pt~~~~l~~~~f~  243 (245)
                       |+++++++||||.
T Consensus       319 r~~~~ei~~Hpff~  332 (412)
T 2vd5_A          319 RGGAGDFRTHPFFF  332 (412)
T ss_dssp             TTTHHHHHTSGGGT
T ss_pred             CCCHHHHhcCCCcC
Confidence             5999999999995

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=6.1e-41  Score=266.47  Aligned_cols=207  Identities=18%  Similarity=0.217  Sum_probs=169.0

Q ss_pred             HHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ....+.+|+.+++++. ||||+++++++...+..++||||+++|+|.+++.               ......+++..++.
T Consensus        71 ~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---------------~~~~~~~~~~~~~~  135 (327)
T 3lm5_A           71 CRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCL---------------PELAEMVSENDVIR  135 (327)
T ss_dssp             CHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGS---------------SCC-CCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHH---------------HhcccCCCHHHHHH
Confidence            4678999999999995 6999999999999999999999999999966553               22245689999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ++.|++.||.|||+.|++||||||+||+++.           ||.+......   ....+|+.|+|||.+.+  ..++.+
T Consensus       136 i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  213 (327)
T 3lm5_A          136 LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNY--DPITTA  213 (327)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTT--CCCCTH
T ss_pred             HHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecC--CCCCch
Confidence            9999999999999999999999999999874           6665543322   23457999999999987  668999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||...+.......+........          ......+++.+.++|.+||+.||.+|||++
T Consensus       214 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  283 (327)
T 3lm5_A          214 TDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYS----------EETFSSVSQLATDFIQSLLVKNPEKRPTAE  283 (327)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccC----------chhhcccCHHHHHHHHHHcCCChhhCcCHH
Confidence            9999999999999999999998777666555544331111          111156789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       284 ~ll~h~~~~  292 (327)
T 3lm5_A          284 ICLSHSWLQ  292 (327)
T ss_dssp             HHTTCGGGC
T ss_pred             HHhCCHhhc
Confidence            999999985

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=4.3e-41  Score=264.66  Aligned_cols=203  Identities=24%  Similarity=0.358  Sum_probs=170.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+.++++++||||+++++++..++..++||||+++++|.+++.                  ...+++..+.
T Consensus        61 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~------------------~~~~~~~~~~  122 (303)
T 3a7i_A           61 EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------------------PGPLDETQIA  122 (303)
T ss_dssp             STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHT------------------TSCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHh------------------cCCCCHHHHH
Confidence            4457889999999999999999999999999999999999999999977664                  2458899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||+.|++|+||||+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.++
T Consensus       123 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~  200 (303)
T 3a7i_A          123 TILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ--SAYDSKA  200 (303)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTT--CCBCTHH
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhc--CCCCchh
Confidence            99999999999999999999999999999976        6665443322    23456899999999987  5688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      ||||||+++|+|++|..||...........+.....         +    .....++..+.+++.+||..||.+|||+++
T Consensus       201 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  267 (303)
T 3a7i_A          201 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP---------P----TLEGNYSKPLKEFVEACLNKEPSFRPTAKE  267 (303)
T ss_dssp             HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---------C----CCCSSCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             hhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCC---------C----CCccccCHHHHHHHHHHcCCChhhCcCHHH
Confidence            999999999999999999988665554443332211         0    112567899999999999999999999999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||.
T Consensus       268 ll~~~~~~  275 (303)
T 3a7i_A          268 LLKHKFIL  275 (303)
T ss_dssp             HTTCHHHH
T ss_pred             HhhChhhh
Confidence            99999983

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=5.2e-41  Score=267.73  Aligned_cols=204  Identities=18%  Similarity=0.235  Sum_probs=172.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++..                 ...+++..+
T Consensus        81 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~l~~~~~  143 (335)
T 2owb_A           81 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-----------------RKALTEPEA  143 (335)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHH-----------------HCSCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhc-----------------cCCCCHHHH
Confidence            346778899999999999999999999999999999999999999999776642                 246889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.++.|++.||.|||++|++|+||||+||+++.        ||.+.....    .....+++.|+|||.+.+  ..++.+
T Consensus       144 ~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  221 (335)
T 2owb_A          144 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK--KGHSFE  221 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHT--SCBCTH
T ss_pred             HHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhcc--CCCCch
Confidence            999999999999999999999999999999976        776654332    223456899999999987  568899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||......+....+.....     .         .+..+++.+.++|.+||+.||.+|||++
T Consensus       222 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-----~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~  287 (335)
T 2owb_A          222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-----S---------IPKHINPVAASLIQKMLQTDPTARPTIN  287 (335)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-----C---------CCTTSCHHHHHHHHHHTCSSGGGSCCGG
T ss_pred             hhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCC-----C---------CCccCCHHHHHHHHHHccCChhHCcCHH
Confidence            9999999999999999999988766655544433221     0         1145788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++|+||.
T Consensus       288 ell~~~~~~  296 (335)
T 2owb_A          288 ELLNDEFFT  296 (335)
T ss_dssp             GGGGSHHHH
T ss_pred             HHhcCcccc
Confidence            999999985

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.9e-41  Score=262.48  Aligned_cols=201  Identities=16%  Similarity=0.266  Sum_probs=147.4

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|+.++++++||||+++++++.+++..++|+|++++++|.+++..                ....+++..++.++
T Consensus        55 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~~~  118 (278)
T 3cok_A           55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN----------------RVKPFSENEARHFM  118 (278)
T ss_dssp             HHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHT----------------CSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhh----------------ccCCCCHHHHHHHH
Confidence            46789999999999999999999999999999999999999999776652                13468899999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .|++.||.|||+.|++|+||||+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.++|||
T Consensus       119 ~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~  196 (278)
T 3cok_A          119 HQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR--SAHGLESDVW  196 (278)
T ss_dssp             HHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC------------------------------CTHHH
T ss_pred             HHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcC--CCCCchhhHH
Confidence            99999999999999999999999999976        6665543221    13456899999999986  5688999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      |||+++|+|++|..||...............       .       ...+..++.++.+++.+||+.||.+|||++++++
T Consensus       197 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          197 SLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA-------D-------YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHHHHHHHHSSCSSCCCSCC-----CCSS-------C-------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCChhHHHHHHHHhhc-------c-------cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            9999999999999999875544333221100       0       0112457899999999999999999999999999


Q ss_pred             ccccc
Q 037274          239 QEMWH  243 (245)
Q Consensus       239 ~~~f~  243 (245)
                      ||||.
T Consensus       263 h~~~~  267 (278)
T 3cok_A          263 HPFMS  267 (278)
T ss_dssp             STTTC
T ss_pred             Ccccc
Confidence            99996

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.1e-40  Score=262.99  Aligned_cols=204  Identities=21%  Similarity=0.251  Sum_probs=162.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|++++++++||||+++++++.+.+..++||||+++|+|.+++....              ....+++..+
T Consensus        74 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~  139 (309)
T 3p86_A           74 HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG--------------AREQLDERRR  139 (309)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTT--------------HHHHSCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcC--------------CCCCCCHHHH
Confidence            45667889999999999999999999999999999999999999999988775311              1123888999


Q ss_pred             HHHHHHHHHHHHHHHhCC--cccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEG--LFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~--ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +.++.|++.||+|||+.|  ++||||||+||+++.        ||.+......    ....+|+.|+|||.+.+  ..++
T Consensus       140 ~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~  217 (309)
T 3p86_A          140 LSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD--EPSN  217 (309)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTT--CCCC
T ss_pred             HHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcC--CCCC
Confidence            999999999999999999  999999999999976        7766533322    23456999999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++||||||+++|+|++|..||...+...............            ..+..+++++.++|.+||+.||.+|||
T Consensus       218 ~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~li~~~l~~dP~~Rps  285 (309)
T 3p86_A          218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL------------EIPRNLNPQVAAIIEGCWTNEPWKRPS  285 (309)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCC------------CCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------------CCCccCCHHHHHHHHHHccCChhhCcC
Confidence            99999999999999999999999877666555443222111            112568899999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      ++++++
T Consensus       286 ~~~ll~  291 (309)
T 3p86_A          286 FATIMD  291 (309)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999876

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=3.3e-41  Score=262.75  Aligned_cols=205  Identities=18%  Similarity=0.240  Sum_probs=167.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++.+++..++|+|++++++|.+++..                 ...+++..+..+
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~  113 (283)
T 3bhy_A           51 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE-----------------KESLTEDEATQF  113 (283)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-----------------HSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHh-----------------cCCCCHHHHHHH
Confidence            367899999999999999999999999999999999999999999777642                 246889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc------------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.|++.||.|||+.|++|+||||+||+++.            ||.+......   ....+++.|+|||.+.+  ..++.+
T Consensus       114 ~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  191 (283)
T 3bhy_A          114 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY--EPLGLE  191 (283)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTT--CCCCTH
T ss_pred             HHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceecC--CCCCcc
Confidence            999999999999999999999999999854            5554433221   13346899999999987  568999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||...........+.......          ........++.+.+++.+||..||.+|||+.
T Consensus       192 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  261 (283)
T 3bhy_A          192 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF----------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIA  261 (283)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC----------CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             hhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCC----------cchhcccCCHHHHHHHHHHccCCHhHCcCHH
Confidence            999999999999999999999877666555443322100          0111145788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       262 ~~l~h~~~~  270 (283)
T 3bhy_A          262 QSLEHSWIK  270 (283)
T ss_dssp             HHHHCHHHH
T ss_pred             HHHhCHHHH
Confidence            999999985

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=8.7e-41  Score=271.34  Aligned_cols=207  Identities=17%  Similarity=0.214  Sum_probs=164.4

Q ss_pred             cHHHHHHHHHHHHHHhhCC--CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLS--HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~--h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+..+.+.+|+.++++|+  ||||+++++++..++..++||| +.+++|.+++..                 ...+++.
T Consensus        94 ~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~-----------------~~~~~~~  155 (390)
T 2zmd_A           94 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK-----------------KKSIDPW  155 (390)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHH-----------------CSSCCHH
T ss_pred             cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHh-----------------cCCCCHH
Confidence            4567788999999999997  5999999999999999999999 567799776652                 2467888


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-------ccCccccccC------CCCccccccccCceecCC----
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------FNDDTRNWIS------SSSSITTWAAAPEVVNFG----  147 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~----  147 (245)
                      .+..++.||+.||.|||+.||+||||||+|||++.       ||++......      ....+|+.|+|||++.+.    
T Consensus       156 ~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  235 (390)
T 2zmd_A          156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR  235 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC----
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccc
Confidence            89999999999999999999999999999999865       8887654332      245679999999998641    


Q ss_pred             -----CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCch-HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHH
Q 037274          148 -----DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL-DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       148 -----~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  221 (245)
                           ...++.++|||||||++|+|++|..||...... .....+.....   .         ...+...+.++.++|.+
T Consensus       236 ~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~li~~  303 (390)
T 2zmd_A          236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH---E---------IEFPDIPEKDLQDVLKC  303 (390)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTS---C---------CCCCCCSCHHHHHHHHH
T ss_pred             cccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccc---c---------CCCCccchHHHHHHHHH
Confidence                 135889999999999999999999999875433 23333222110   0         01113457889999999


Q ss_pred             hcCCCCCCCccHHHHhhccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ||+.||.+|||+.++++||||.
T Consensus       304 ~L~~dP~~Rps~~ell~hp~~~  325 (390)
T 2zmd_A          304 CLKRDPKQRISIPELLAHPYVQ  325 (390)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HcccChhhCCCHHHHhhCcCcc
Confidence            9999999999999999999985

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=4e-41  Score=274.08  Aligned_cols=205  Identities=19%  Similarity=0.231  Sum_probs=157.7

Q ss_pred             HHHHHHHHHHh-hCCCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274           12 AKLAREIYRYK-HLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus        12 ~~~~~E~~~l~-~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+.+|+.++. ..+||||+++++++..    .+..++||||+++|+|.+++..               .....+++..+
T Consensus        99 ~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~---------------~~~~~l~~~~~  163 (400)
T 1nxk_A           99 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA  163 (400)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHC---------------C---CCBHHHH
T ss_pred             hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHH---------------hCCCCCCHHHH
Confidence            45778888874 5589999999999875    5678999999999999776652               22346899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC---CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.||+.||.|||+.|++||||||+|||++.           ||++......   ....+|+.|+|||++.+  ..++
T Consensus       164 ~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~  241 (400)
T 1nxk_A          164 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP--EKYD  241 (400)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCC--CCSS
T ss_pred             HHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCC--CCCC
Confidence            999999999999999999999999999999973           7776544322   24556999999999976  6689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchH----HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLD----IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      .++|||||||++|+|++|..||.+.....    ....+.....     ..+.     .....+++++.++|.+||+.||.
T Consensus       242 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~-----~~~~-----~~~~~~s~~~~~li~~~L~~dP~  311 (400)
T 1nxk_A          242 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY-----EFPN-----PEWSEVSEEVKMLIRNLLKTEPT  311 (400)
T ss_dssp             SHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCC-----CCCT-----TTTTTSCHHHHHHHHTTSCSSGG
T ss_pred             CcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcc-----cCCC-----cccccCCHHHHHHHHHHCCCChh
Confidence            99999999999999999999998754322    2222222111     1110     11145789999999999999999


Q ss_pred             CCccHHHHhhccccc
Q 037274          229 KRPAAEAQVLQEMWH  243 (245)
Q Consensus       229 ~Rpt~~~~l~~~~f~  243 (245)
                      +|||++++++||||.
T Consensus       312 ~Rpt~~eil~hp~~~  326 (400)
T 1nxk_A          312 QRMTITEFMNHPWIM  326 (400)
T ss_dssp             GSCCHHHHHHSHHHH
T ss_pred             HCcCHHHHhcCcccc
Confidence            999999999999985

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=8.4e-41  Score=261.92  Aligned_cols=204  Identities=18%  Similarity=0.234  Sum_probs=171.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++.+++..++++|++++++|.+++..                 ...+++..+
T Consensus        55 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~  117 (294)
T 2rku_A           55 KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-----------------RKALTEPEA  117 (294)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HCSCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHh-----------------cCCCCHHHH
Confidence            356778899999999999999999999999999999999999999999776642                 246889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||.|||+.|++|+||||+||+++.        ||.+.....    .....+++.|+|||.+.+  ..++.+
T Consensus       118 ~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  195 (294)
T 2rku_A          118 RYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK--KGHSFE  195 (294)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTT--SCBCTH
T ss_pred             HHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhcc--CCCCch
Confidence            999999999999999999999999999999976        666654322    223456899999999986  568899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||......+....+.....              ..+..+++.+.+++.+||+.||.+|||++
T Consensus       196 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~  261 (294)
T 2rku_A          196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--------------SIPKHINPVAASLIQKMLQTDPTARPTIN  261 (294)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--------------CCCTTSCHHHHHHHHHHTCSSGGGSCCGG
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccC--------------CCccccCHHHHHHHHHHcccChhhCcCHH
Confidence            9999999999999999999988766555444432210              11145788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       262 ~ll~~~~~~  270 (294)
T 2rku_A          262 ELLNDEFFT  270 (294)
T ss_dssp             GGGGSHHHH
T ss_pred             HHhhChhee
Confidence            999999984

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1e-40  Score=274.41  Aligned_cols=218  Identities=17%  Similarity=0.226  Sum_probs=160.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC-----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ-----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      .....+.+.+|+.++++++||||+++++++...     +..|+|||++++ +|.+++..                 ...+
T Consensus        65 ~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-----------------~~~l  126 (432)
T 3n9x_A           65 DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKT-----------------PIFL  126 (432)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHHS-----------------SCCC
T ss_pred             ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHhc-----------------cCCC
Confidence            456778899999999999999999999998765     568999999975 99776642                 3568


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------------------------
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------------------------  129 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------------------------  129 (245)
                      ++..++.++.||+.||.|||+.|++||||||+|||++.        ||++......                        
T Consensus       127 ~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (432)
T 3n9x_A          127 TEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKK  206 (432)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC---------------------------
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhc
Confidence            99999999999999999999999999999999999976        7877654322                        


Q ss_pred             --CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhC-----------CCCCCCCCc-----------------
Q 037274          130 --SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG-----------GLPVSRRQD-----------------  179 (245)
Q Consensus       130 --~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g-----------~~p~~~~~~-----------------  179 (245)
                        ....+|+.|+|||++.. ...++.++|||||||++|+|++|           .++|.+.+.                 
T Consensus       207 ~~~~~~gt~~Y~APE~~~~-~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~  285 (432)
T 3n9x_A          207 QLTSHVVTRWYRAPELILL-QENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSN  285 (432)
T ss_dssp             ----CCCCCTTCCHHHHTT-CSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHH
T ss_pred             cccCCCCCccccCHHHHhc-CCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccch
Confidence              34566999999998753 35689999999999999999984           344433221                 


Q ss_pred             hHHHHHHHhcCCCCcc-----------------CCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhcccc
Q 037274          180 LDIMTKMLMKQPKSTS-----------------LQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW  242 (245)
Q Consensus       180 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f  242 (245)
                      .+.+..+.........                 .....+.........+++++.+||.+||+.||.+|||++++++||||
T Consensus       286 ~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f  365 (432)
T 3n9x_A          286 RDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL  365 (432)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGG
T ss_pred             HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhh
Confidence            1111121111110000                 00000000000113578999999999999999999999999999998


Q ss_pred             c
Q 037274          243 H  243 (245)
Q Consensus       243 ~  243 (245)
                      .
T Consensus       366 ~  366 (432)
T 3n9x_A          366 K  366 (432)
T ss_dssp             T
T ss_pred             h
Confidence            5

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=4.5e-41  Score=265.78  Aligned_cols=205  Identities=27%  Similarity=0.417  Sum_probs=169.2

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++..++..++|+||+++++|.+++..                ....+++..++.+
T Consensus        67 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~i  130 (314)
T 3com_A           67 DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL----------------RNKTLTEDEIATI  130 (314)
T ss_dssp             CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH----------------HTCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHh----------------cCCCCCHHHHHHH
Confidence            456789999999999999999999999999999999999999999777641                1356889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||+.|++|+||+|+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.++||
T Consensus       131 ~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di  208 (314)
T 3com_A          131 LQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--IGYNCVADI  208 (314)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSS--SCBCTTHHH
T ss_pred             HHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCC--CCCCccccH
Confidence            999999999999999999999999999975        6665443322    23456899999999987  568999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|+|++|..||..................           ....+..++..+.+++.+||..||.+|||+.+++
T Consensus       209 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll  277 (314)
T 3com_A          209 WSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP-----------TFRKPELWSDNFTDFVKQCLVKSPEQRATATQLL  277 (314)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-----------CCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCc-----------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            99999999999999999886655444333222110           0011255789999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +||||.
T Consensus       278 ~~~~~~  283 (314)
T 3com_A          278 QHPFVR  283 (314)
T ss_dssp             TSHHHH
T ss_pred             hCHHHh
Confidence            999985

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=7.3e-41  Score=265.76  Aligned_cols=201  Identities=20%  Similarity=0.286  Sum_probs=167.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++.+++..++||||+++|+|.+++..                ....+++..+
T Consensus        90 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~  153 (325)
T 3kul_A           90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT----------------HDGQFTIMQL  153 (325)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHT----------------TTTCSCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHh----------------cccCCCHHHH
Confidence            566778899999999999999999999999999999999999999999777742                1346889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ..++.|++.||.|||+.|++||||||+||+++.        ||++.......       ...+|+.|+|||.+.+  ..+
T Consensus       154 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~  231 (325)
T 3kul_A          154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF--RTF  231 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHH--CEE
T ss_pred             HHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcC--CCC
Confidence            999999999999999999999999999999975        77765443221       2233678999999987  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|+|++ |..||...........+....      ..+       .+..+++.+.+++..||..||.+|
T Consensus       232 ~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~l~~li~~~l~~dp~~R  298 (325)
T 3kul_A          232 SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY------RLP-------APMGCPHALHQLMLDCWHKDRAQR  298 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC------CCC-------CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC------CCC-------CCCCcCHHHHHHHHHHccCChhhC
Confidence            999999999999999998 999999877776666554432      111       115678999999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      ||+.++++
T Consensus       299 ps~~eil~  306 (325)
T 3kul_A          299 PRFSQIVS  306 (325)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999875

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.8e-40  Score=260.42  Aligned_cols=208  Identities=18%  Similarity=0.228  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ...+.+.+|+++++++. ||||+++++++..++..++|+|++++++|.+++..                 ...+++..++
T Consensus        65 ~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~  127 (298)
T 1phk_A           65 ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-----------------KVTLSEKETR  127 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhc-----------------cCCCCHHHHH
Confidence            45677899999999995 99999999999999999999999999999777652                 2458899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecC----CCCCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNF----GDDYYS  152 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~----~~~~~~  152 (245)
                      .++.|++.||.|||+.|++|+||+|+||+++.        ||.+......   ....+++.|+|||.+.+    ....++
T Consensus       128 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  207 (298)
T 1phk_A          128 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYG  207 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBC
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCC
Confidence            99999999999999999999999999999976        6665443322   23456899999999852    124578


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++||||||+++|+|++|..||...+.......+.......     ..     .....++..+.+++.+||+.||.+|||
T Consensus       208 ~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps  277 (298)
T 1phk_A          208 KEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF-----GS-----PEWDDYSDTVKDLVSRFLVVQPQKRYT  277 (298)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-----CT-----TTGGGSCHHHHHHHHHHCCSSGGGSCC
T ss_pred             cccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCccc-----Cc-----ccccccCHHHHHHHHHHccCCcccCCC
Confidence            99999999999999999999998877666555544432111     00     111467899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       278 ~~~ll~h~~~~  288 (298)
T 1phk_A          278 AEEALAHPFFQ  288 (298)
T ss_dssp             HHHHTTSGGGC
T ss_pred             HHHHHhChHhh
Confidence            99999999986

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=6.7e-41  Score=272.42  Aligned_cols=214  Identities=14%  Similarity=0.204  Sum_probs=163.6

Q ss_pred             HHHHHHHhhCCCCCeeeEEEEEEeCce------eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           15 AREIYRYKHLSHPNIIPIYKTMISQRQ------LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        15 ~~E~~~l~~l~h~~Iv~~~~~~~~~~~------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .+|+++++.++||||+++++++...+.      .++||||++++.+..+..              .......+++..++.
T Consensus        80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--------------~~~~~~~~~~~~~~~  145 (394)
T 4e7w_A           80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRH--------------YAKLKQTMPMLLIKL  145 (394)
T ss_dssp             CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHH--------------HHHTTSCCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHH--------------HHhhcCCCCHHHHHH
Confidence            479999999999999999999865433      889999999754422221              111245789999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceecc-c--------ccCccccccC---CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHN-I--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~-~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.|++.||+|||+.|++||||||+||+++ .        ||++......   ....+|+.|+|||.+.+ ...++.++|
T Consensus       146 ~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~D  224 (394)
T 4e7w_A          146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFG-ATNYTTNID  224 (394)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTT-CSSCCTHHH
T ss_pred             HHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcC-CCCCCcHHH
Confidence            999999999999999999999999999998 3        8877654322   24456999999999875 345899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCc------------cCCC---CCCCCCCCCcccccHHHHHHHHH
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST------------SLQV---APNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~------------~~~~---~~~~~~~~~~~~~~~~~~~li~~  221 (245)
                      ||||||++|+|++|+.||.+.+..+....+........            ....   .............++++.++|.+
T Consensus       225 iwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  304 (394)
T 4e7w_A          225 IWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISR  304 (394)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHH
Confidence            99999999999999999999877666655544321100            0000   00000111224578899999999


Q ss_pred             hcCCCCCCCccHHHHhhccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ||+.||.+|||+.++++||||.
T Consensus       305 ~L~~dP~~R~t~~e~l~hp~f~  326 (394)
T 4e7w_A          305 LLEYTPSARLTAIEALCHPFFD  326 (394)
T ss_dssp             HCCSSGGGSCCHHHHHTSGGGS
T ss_pred             HhCCChhhCCCHHHHhcChhhh
Confidence            9999999999999999999995

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=5.2e-41  Score=265.64  Aligned_cols=207  Identities=16%  Similarity=0.212  Sum_probs=160.7

Q ss_pred             HHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+.+|+++++++ +||||+++++++.+++..++||||+++++|.+++..                 ...+++..+..
T Consensus        53 ~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~  115 (316)
T 2ac3_A           53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK-----------------RRHFNELEASV  115 (316)
T ss_dssp             CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-----------------HSSCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhc-----------------cCCCCHHHHHH
Confidence            457789999999985 799999999999999999999999999999777652                 24588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC-----------CCCccccccccCceecC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS-----------SSSSITTWAAAPEVVNF  146 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~-----------~~~~~~~~y~aPE~~~~  146 (245)
                      ++.|++.||+|||++|++|+||||+||+++.           ||++......           ....+|+.|+|||.+.+
T Consensus       116 i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  195 (316)
T 2ac3_A          116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA  195 (316)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhc
Confidence            9999999999999999999999999999864           5554432211           12347999999999864


Q ss_pred             C---CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchH---------------HHHHHHhcCCCCccCCCCCCCCCCCCc
Q 037274          147 G---DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLD---------------IMTKMLMKQPKSTSLQVAPNEDTTHGT  208 (245)
Q Consensus       147 ~---~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (245)
                      .   ...++.++|||||||++|+|++|..||......+               ....+.....     ..+     ....
T Consensus       196 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~-----~~~~  265 (316)
T 2ac3_A          196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY-----EFP-----DKDW  265 (316)
T ss_dssp             TSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCC-----CCC-----HHHH
T ss_pred             ccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCc-----ccC-----chhc
Confidence            1   1236789999999999999999999998754311               1222221110     000     0011


Q ss_pred             ccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          209 RTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       209 ~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..+++++.++|.+||+.||.+|||++++++||||.
T Consensus       266 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~  300 (316)
T 2ac3_A          266 AHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ  300 (316)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC
T ss_pred             ccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhc
Confidence            35788999999999999999999999999999996

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=9.4e-41  Score=261.63  Aligned_cols=211  Identities=22%  Similarity=0.303  Sum_probs=165.4

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.++++++||||+++++++...+..++|+|++++++|.+++...              .....+++..+.
T Consensus        60 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------------~~~~~~~~~~~~  125 (295)
T 2clq_A           60 SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK--------------WGPLKDNEQTIG  125 (295)
T ss_dssp             C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHT--------------TCCCTTCHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhh--------------ccCCCccHHHHH
Confidence            345678999999999999999999999999999999999999999998777531              122356788899


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCcccccc----CCCCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|++.||.|||+.|++|+||||+||+++.         ||.+.....    .....+++.|+|||.+.++...++.+
T Consensus       126 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  205 (295)
T 2clq_A          126 FYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA  205 (295)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHH
T ss_pred             HHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcH
Confidence            99999999999999999999999999999964         665543322    22345689999999997633347899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||.................      ..     ...+..+++++.+++.+||+.||.+|||++
T Consensus       206 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  274 (295)
T 2clq_A          206 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK------VH-----PEIPESMSAEAKAFILKCFEPDPDKRACAN  274 (295)
T ss_dssp             HHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC------CC-----CCCCTTSCHHHHHHHHHTTCSSTTTSCCHH
T ss_pred             HHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc------cc-----ccccccCCHHHHHHHHHHccCChhhCCCHH
Confidence            9999999999999999999976443322111111110      00     011256789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       275 ~ll~~~~~~  283 (295)
T 2clq_A          275 DLLVDEFLK  283 (295)
T ss_dssp             HHHTSGGGC
T ss_pred             HHhcChhhh
Confidence            999999996

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.2e-40  Score=273.59  Aligned_cols=221  Identities=16%  Similarity=0.182  Sum_probs=170.0

Q ss_pred             cccHHHHHHHHHHHHHHhhC------CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccC
Q 037274            5 NHQAEEYAKLAREIYRYKHL------SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR   78 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l------~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~   78 (245)
                      .......+.+.+|+.+++.+      +|+||+++++.+...+..++|+|++. ++|.+++..               ...
T Consensus       131 ~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~---------------~~~  194 (429)
T 3kvw_A          131 RNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKK---------------NKF  194 (429)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHH---------------TTT
T ss_pred             CCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHh---------------ccC
Confidence            34455667888899998887      57799999999999999999999997 588666642               223


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccC-CCCccccccccCceecCC
Q 037274           79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWIS-SSSSITTWAAAPEVVNFG  147 (245)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~  147 (245)
                      ..+++..+..++.||+.||+|||+.|++||||||+|||++.          ||++...... ....+|+.|+|||.+.+ 
T Consensus       195 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~-  273 (429)
T 3kvw_A          195 QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILG-  273 (429)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHT-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCccChHHHhC-
Confidence            45899999999999999999999999999999999999975          6665443322 24467999999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------C---------C-----
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------Q---------V-----  198 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~---------~-----  198 (245)
                       ..++.++|||||||++|+|++|..||.+.+..+....+..........               .         .     
T Consensus       274 -~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (429)
T 3kvw_A          274 -ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSV  352 (429)
T ss_dssp             -BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--C
T ss_pred             -CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccc
Confidence             568999999999999999999999999887766655544322110000               0         0     


Q ss_pred             --------------CCCC--CCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          199 --------------APNE--DTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       199 --------------~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                                    ++..  .........++.+.+||.+||+.||.+|||++++++||||+
T Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~  413 (429)
T 3kvw_A          353 VLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR  413 (429)
T ss_dssp             EECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC
T ss_pred             cccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhc
Confidence                          0000  00000123467899999999999999999999999999996

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.2e-40  Score=258.80  Aligned_cols=202  Identities=20%  Similarity=0.256  Sum_probs=161.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++..++..++|+|++++++|.+++..                 ...+++..+..+
T Consensus        54 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~~  116 (276)
T 2h6d_A           54 VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-----------------HGRVEEMEARRL  116 (276)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-----------------HCSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhc-----------------cCCCCHHHHHHH
Confidence            356789999999999999999999999999999999999999999777652                 245888999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchhhHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      +.|++.||.|||++|++|+||||+||+++.        ||.+......   ....+++.|+|||.+.+ ....+.++|||
T Consensus       117 ~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~  195 (276)
T 2h6d_A          117 FQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG-RLYAGPEVDIW  195 (276)
T ss_dssp             HHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------CCTGGGTT-SCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccCHHHHcC-CCCCCccchHH
Confidence            999999999999999999999999999976        6655443322   23456899999999986 22346899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      |||+++|+|++|..||...........+.....              ..+..++..+.+++.+||+.||.+|||++++++
T Consensus       196 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          196 SCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF--------------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc--------------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            999999999999999988766555554433221              011457889999999999999999999999999


Q ss_pred             ccccc
Q 037274          239 QEMWH  243 (245)
Q Consensus       239 ~~~f~  243 (245)
                      ||||.
T Consensus       262 h~~~~  266 (276)
T 2h6d_A          262 HEWFK  266 (276)
T ss_dssp             SHHHH
T ss_pred             Chhhc
Confidence            99985

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=9e-41  Score=261.76  Aligned_cols=209  Identities=18%  Similarity=0.188  Sum_probs=166.3

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ...+..+.+.+|+.++++++||||+++++++..++..++||||+++++|.+++..                 ...+++..
T Consensus        50 ~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-----------------~~~~~~~~  112 (294)
T 4eqm_A           50 EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-----------------HGPLSVDT  112 (294)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-----------------HCSCCHHH
T ss_pred             ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHh-----------------cCCCCHHH
Confidence            3456778899999999999999999999999999999999999999999777652                 24688999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +..++.|++.||.|||+.|++||||||+||+++.        ||.+.......     ...+|+.|+|||.+.+  ..++
T Consensus       113 ~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~  190 (294)
T 4eqm_A          113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG--EATD  190 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHT--CCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcC--CCCC
Confidence            9999999999999999999999999999999975        77765443222     2356999999999987  6689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++||||||+++|+|++|..||.+.+...............         ........+++.+.+++.+||+.||.+||+
T Consensus       191 ~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~R~~  261 (294)
T 4eqm_A          191 ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN---------VTTDVRKDIPQSLSNVILRATEKDKANRYK  261 (294)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC---------HHHHSCTTSCHHHHHHHHHHSCSSGGGSCS
T ss_pred             chHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC---------cchhcccCCCHHHHHHHHHHhcCCHhHccc
Confidence            99999999999999999999999876655544433222111         011112567899999999999999999996


Q ss_pred             HHHHhhcccc
Q 037274          233 AEAQVLQEMW  242 (245)
Q Consensus       233 ~~~~l~~~~f  242 (245)
                      ..+.+.++|.
T Consensus       262 ~~~~l~~~l~  271 (294)
T 4eqm_A          262 TIQEMKDDLS  271 (294)
T ss_dssp             SHHHHHHHHH
T ss_pred             cHHHHHHHHH
Confidence            6666665553

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.1e-40  Score=268.62  Aligned_cols=218  Identities=17%  Similarity=0.236  Sum_probs=170.6

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC-----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ-----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      ......+.+.+|++++++++||||+++++++...     ...++|+|++++ +|.+++.                  ...
T Consensus        64 ~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~------------------~~~  124 (364)
T 3qyz_A           64 EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLK------------------TQH  124 (364)
T ss_dssp             TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHH------------------HCC
T ss_pred             cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccCc-CHHHHHH------------------hCC
Confidence            3455668899999999999999999999998665     358999999985 8866664                  245


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------CCCccccccccCceec
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------SSSSITTWAAAPEVVN  145 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------~~~~~~~~y~aPE~~~  145 (245)
                      +++..+..++.|++.||.|||++|++||||||+||+++.        ||.+......       ....+|+.|+|||.+.
T Consensus       125 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  204 (364)
T 3qyz_A          125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML  204 (364)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhc
Confidence            889999999999999999999999999999999999976        7766544322       2346799999999876


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------CCCC--CCCCCCCc
Q 037274          146 FGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------QVAP--NEDTTHGT  208 (245)
Q Consensus       146 ~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~--~~~~~~~~  208 (245)
                      + ...++.++|||||||++|+|++|+.||.+.+..+....+..........               ..+.  ........
T Consensus       205 ~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (364)
T 3qyz_A          205 N-SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF  283 (364)
T ss_dssp             T-BCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHC
T ss_pred             C-CCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhC
Confidence            4 3458999999999999999999999999888777766654332111100               0000  00001111


Q ss_pred             ccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          209 RTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       209 ~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..+++++.++|.+||+.||.+|||++++++||||.
T Consensus       284 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  318 (364)
T 3qyz_A          284 PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE  318 (364)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence            45688999999999999999999999999999986

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=7.6e-41  Score=258.96  Aligned_cols=199  Identities=21%  Similarity=0.336  Sum_probs=165.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+++.+|++++++++||||+++++++.+++..++||||+++++|.+++..                ....+++..++.+
T Consensus        48 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~i  111 (269)
T 4hcu_A           48 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT----------------QRGLFAAETLLGM  111 (269)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHT----------------TTTCCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHh----------------cCcccCHHHHHHH
Confidence            346799999999999999999999999999999999999999999777742                1345889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-----CCCCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-----SSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||.|||+.|++|+||||+||+++.        ||.+.....     .....+++.|+|||.+.+  ..++.++|
T Consensus       112 ~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  189 (269)
T 4hcu_A          112 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--SRYSSKSD  189 (269)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHH--CCCCHHHH
T ss_pred             HHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcC--CCCCchhh
Confidence            999999999999999999999999999976        666543322     113344778999999987  56899999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||+++|+|++ |..||...........+.....      ..       .+...++.+.+++.+||+.||.+|||+.+
T Consensus       190 i~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~  256 (269)
T 4hcu_A          190 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR------LY-------KPRLASTHVYQIMNHCWRERPEDRPAFSR  256 (269)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC------CC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCcc------CC-------CCCcCCHHHHHHHHHHccCCcccCcCHHH
Confidence            9999999999999 9999998777666655543321      11       11457889999999999999999999999


Q ss_pred             Hhhc
Q 037274          236 QVLQ  239 (245)
Q Consensus       236 ~l~~  239 (245)
                      ++++
T Consensus       257 ll~~  260 (269)
T 4hcu_A          257 LLRQ  260 (269)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=6.7e-41  Score=280.45  Aligned_cols=205  Identities=14%  Similarity=0.151  Sum_probs=168.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+.+..|+||||+++|+|.+++....             .....+++..+..+
T Consensus       228 ~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~-------------~~~~~l~e~~~~~~  294 (543)
T 3c4z_A          228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD-------------EDNPGFQEPRAIFY  294 (543)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSS-------------TTSCSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhh-------------cccccccHHHHHHH
Confidence            35678899999999999999999999999999999999999999977664211             11346899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.||+.||.|||++||+||||||+||+++.        ||++.......    ...||+.|+|||.+.+  ..++.++|+
T Consensus       295 ~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~~Di  372 (543)
T 3c4z_A          295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG--EEYDFSVDY  372 (543)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTT--CCBCTHHHH
T ss_pred             HHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcC--CCCChHHhc
Confidence            999999999999999999999999999976        88776543322    3478999999999987  678999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCc----hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-
Q 037274          158 WLIGITALQFPCGGLPVSRRQD----LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-  232 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-  232 (245)
                      |||||++|+|++|..||...+.    ......+....       .       ..+..+++.+.++|.+||+.||.+||+ 
T Consensus       373 wSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~-------~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA-------V-------TYPDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             HHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC-------C-------CCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             CcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc-------c-------CCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence            9999999999999999987543    22222222211       0       111567899999999999999999995 


Q ss_pred             ----HHHHhhccccc
Q 037274          233 ----AEAQVLQEMWH  243 (245)
Q Consensus       233 ----~~~~l~~~~f~  243 (245)
                          ++++++||||+
T Consensus       439 ~~~~a~ei~~Hpff~  453 (543)
T 3c4z_A          439 RDGSCDGLRTHPLFR  453 (543)
T ss_dssp             BTTBSHHHHTSGGGT
T ss_pred             cccCHHHHHcCcccc
Confidence                58999999996

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.4e-40  Score=261.55  Aligned_cols=208  Identities=25%  Similarity=0.399  Sum_probs=166.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +..+.+.+|+.++++++||||+++++++..++..++|+|++++++|.+++..                ....+++..+..
T Consensus        58 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----------------~~~~~~~~~~~~  121 (302)
T 2j7t_A           58 EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE----------------LDRGLTEPQIQV  121 (302)
T ss_dssp             CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHH----------------HTSCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHh----------------hccCCCHHHHHH
Confidence            3467889999999999999999999999999999999999999999776642                134588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccc----ccCCCCccccccccCceecC---CCCCCCc
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRN----WISSSSSITTWAAAPEVVNF---GDDYYSC  153 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~----~~~~~~~~~~~y~aPE~~~~---~~~~~~~  153 (245)
                      ++.|++.||.|||+.|++|+||||+||+++.        ||.+...    .......+++.|+|||.+..   +...++.
T Consensus       122 ~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  201 (302)
T 2j7t_A          122 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY  201 (302)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTT
T ss_pred             HHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCch
Confidence            9999999999999999999999999999985        5543211    11223457999999999841   1256889


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++||||||+++|+|++|..||...+...............           ...+..++..+.+++.+||..||.+|||+
T Consensus       202 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~  270 (302)
T 2j7t_A          202 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPT-----------LLTPSKWSVEFRDFLKIALDKNPETRPSA  270 (302)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC-----------CSSGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             hhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcc-----------cCCccccCHHHHHHHHHHcccChhhCCCH
Confidence            9999999999999999999999876655554443332110           11125678899999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      +++++||||.
T Consensus       271 ~~ll~h~~~~  280 (302)
T 2j7t_A          271 AQLLEHPFVS  280 (302)
T ss_dssp             HHHTTSTTTT
T ss_pred             HHHhcChHHh
Confidence            9999999986

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=1.9e-41  Score=267.63  Aligned_cols=208  Identities=17%  Similarity=0.227  Sum_probs=166.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCce----eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ----LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ..+..+.+.+|+.++++++||||+++++++...+.    .++||||+++++|.+++..                 ...++
T Consensus        52 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-----------------~~~~~  114 (311)
T 3ork_A           52 DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----------------EGPMT  114 (311)
T ss_dssp             SHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHH-----------------HCSCC
T ss_pred             CHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHh-----------------cCCCC
Confidence            45667789999999999999999999999876554    4999999999999777652                 24588


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~  147 (245)
                      +..++.++.|++.||.|||++|++|+||||+||+++.        ||.+.......       ...+|+.|+|||.+.+ 
T Consensus       115 ~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  193 (311)
T 3ork_A          115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG-  193 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcC-
Confidence            9999999999999999999999999999999999975        77665433221       2346999999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                       ..++.++||||||+++|+|++|..||.+..................          ......++.++.++|.+||+.||
T Consensus       194 -~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP  262 (311)
T 3ork_A          194 -DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP----------SARHEGLSADLDAVVLKALAKNP  262 (311)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCH----------HHHSTTCCHHHHHHHHHHTCSSG
T ss_pred             -CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCc----------ccccCCCCHHHHHHHHHHHhcCH
Confidence             5689999999999999999999999998776665554443321110          01114578999999999999999


Q ss_pred             CCCccHHHHhhccccc
Q 037274          228 AKRPAAEAQVLQEMWH  243 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~f~  243 (245)
                      .+||++.+++.|+|++
T Consensus       263 ~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          263 ENRYQTAAEMRADLVR  278 (311)
T ss_dssp             GGSCSSHHHHHHHHHH
T ss_pred             hhChhhHHHHHHHHHH
Confidence            9999999999999975

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.2e-40  Score=265.39  Aligned_cols=196  Identities=18%  Similarity=0.224  Sum_probs=161.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccC-CHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIG-SLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+.+|+.++++++||||+++++++.+.+..++|+|++.+| +|.+++..                 ...+++..+..
T Consensus        72 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~-----------------~~~l~~~~~~~  134 (335)
T 3dls_A           72 KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR-----------------HPRLDEPLASY  134 (335)
T ss_dssp             TTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHT-----------------CCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHh-----------------cCCCCHHHHHH
Confidence            3446778999999999999999999999999999999999776 99766642                 34689999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCCchhhH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      ++.|++.||.|||++|++||||||+||+++.        ||.+.......   ...+|+.|+|||.+.+ ....+.++||
T Consensus       135 i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~Di  213 (335)
T 3dls_A          135 IFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG-NPYRGPELEM  213 (335)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTT-CCBCSHHHHH
T ss_pred             HHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccccChhhhcC-CCCCCCcccc
Confidence            9999999999999999999999999999976        77765443322   3346999999999986 2234889999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|+|++|..||......         ..    ...       ..+..+++++.+++.+||+.||.+|||+++++
T Consensus       214 wslG~il~el~~g~~pf~~~~~~---------~~----~~~-------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell  273 (335)
T 3dls_A          214 WSLGVTLYTLVFEENPFCELEET---------VE----AAI-------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLV  273 (335)
T ss_dssp             HHHHHHHHHHHHSSCSCSSGGGG---------TT----TCC-------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             hhHHHHHHHHHhCCCchhhHHHH---------Hh----hcc-------CCCcccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            99999999999999999762210         00    001       11245789999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +||||.
T Consensus       274 ~hp~~~  279 (335)
T 3dls_A          274 TDPWVT  279 (335)
T ss_dssp             HCTTTT
T ss_pred             cCcccc
Confidence            999985

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.6e-40  Score=266.51  Aligned_cols=215  Identities=14%  Similarity=0.203  Sum_probs=163.7

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEe--------CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMIS--------QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ...+.+|+.++++++||||+++++++..        .+..++||||+++ +|.+.+..                ....++
T Consensus        60 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~----------------~~~~~~  122 (351)
T 3mi9_A           60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN----------------VLVKFT  122 (351)
T ss_dssp             CHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHC----------------TTSCCC
T ss_pred             hHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhh----------------ccCCCC
Confidence            4567899999999999999999999876        3468999999986 66554432                124588


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc--------CCCCccccccccCceecC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI--------SSSSSITTWAAAPEVVNF  146 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~--------~~~~~~~~~y~aPE~~~~  146 (245)
                      +..++.++.|++.||.|||++|++||||||+||+++.        ||.+.....        .....+|+.|+|||.+.+
T Consensus       123 ~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (351)
T 3mi9_A          123 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLG  202 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcC
Confidence            9999999999999999999999999999999999975        776654321        123456999999999875


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCC---------CCC---------c
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDT---------THG---------T  208 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---------~  208 (245)
                       ...++.++|||||||++|+|++|..||.+.+.......+............+.....         ...         .
T Consensus       203 -~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (351)
T 3mi9_A          203 -ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKA  281 (351)
T ss_dssp             -CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHH
T ss_pred             -CCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhh
Confidence             345799999999999999999999999987776666555443221111000000000         000         0


Q ss_pred             ccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          209 RTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       209 ~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ...++.+.++|.+||+.||.+|||++++++||||.
T Consensus       282 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  316 (351)
T 3mi9_A          282 YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW  316 (351)
T ss_dssp             HHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             ccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcC
Confidence            01267799999999999999999999999999995

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.5e-40  Score=259.75  Aligned_cols=202  Identities=18%  Similarity=0.201  Sum_probs=158.7

Q ss_pred             HHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .........|+..+.++ +||||+++++++.+++..++|||++ +++|.+++..                ....+++..+
T Consensus        97 ~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~----------------~~~~l~~~~~  159 (311)
T 3p1a_A           97 PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEA----------------WGASLPEAQV  159 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHH----------------HCSCCCHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHh----------------cCCCCCHHHH
Confidence            44555666676666555 8999999999999999999999999 5688665542                1356899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCchh
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      +.++.|++.||.|||+.|++|+||||+|||++.        ||++......   ....+|+.|+|||.+.+   .++.++
T Consensus       160 ~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~  236 (311)
T 3p1a_A          160 WGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG---SYGTAA  236 (311)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT---CCSTHH
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC---CCCchh
Confidence            999999999999999999999999999999976        7776544322   23457999999999874   489999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      ||||||+++|+|++|..|+...   .....+.....            .......+++++.+++.+||+.||.+|||+++
T Consensus       237 DiwslG~il~el~~g~~~~~~~---~~~~~~~~~~~------------~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  301 (311)
T 3p1a_A          237 DVFSLGLTILEVACNMELPHGG---EGWQQLRQGYL------------PPEFTAGLSSELRSVLVMMLEPDPKLRATAEA  301 (311)
T ss_dssp             HHHHHHHHHHHHHHTCCCCSSH---HHHHHHTTTCC------------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCc---cHHHHHhccCC------------CcccccCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            9999999999999998777652   22222222110            01112557899999999999999999999999


Q ss_pred             Hhhcccccc
Q 037274          236 QVLQEMWHF  244 (245)
Q Consensus       236 ~l~~~~f~~  244 (245)
                      +++||||+-
T Consensus       302 ll~hp~~~~  310 (311)
T 3p1a_A          302 LLALPVLRQ  310 (311)
T ss_dssp             HHTSGGGSC
T ss_pred             HHhCccccC
Confidence            999999974

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.2e-40  Score=286.66  Aligned_cols=202  Identities=14%  Similarity=0.198  Sum_probs=173.3

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+.+..|..++..+ +||+|+++++++.+.+..++||||+++|+|.+++..                 ...+++..+.
T Consensus       383 ~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-----------------~~~~~~~~~~  445 (674)
T 3pfq_A          383 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-----------------VGRFKEPHAV  445 (674)
T ss_dssp             TTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHH-----------------HSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHh-----------------cCCCCHHHHH
Confidence            3456788999999988 699999999999999999999999999999776652                 2458999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.||+.||.|||+.||+||||||+|||++.        ||+++....    .....||+.|+|||++.+  ..++.++
T Consensus       446 ~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~~  523 (674)
T 3pfq_A          446 FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAY--QPYGKSV  523 (674)
T ss_dssp             HHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTC--CCBSTHH
T ss_pred             HHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcC--CCCCccc
Confidence            99999999999999999999999999999976        887764322    224567999999999987  6689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH--
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA--  233 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~--  233 (245)
                      |+||||+++|||++|..||.+.+..+....+.....              ..+..+++++.++|.+||+.||.+||++  
T Consensus       524 DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~--------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~  589 (674)
T 3pfq_A          524 DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV--------------AYPKSMSKEAVAICKGLMTKHPGKRLGCGP  589 (674)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCC--------------CCCTTSCHHHHHHHHHHSCSSSTTCTTCST
T ss_pred             eEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC--------------CCCccCCHHHHHHHHHHccCCHHHCCCCCC
Confidence            999999999999999999999887777776654321              1115688999999999999999999997  


Q ss_pred             ---HHHhhccccc
Q 037274          234 ---EAQVLQEMWH  243 (245)
Q Consensus       234 ---~~~l~~~~f~  243 (245)
                         +++++||||+
T Consensus       590 ~~~~ei~~h~ff~  602 (674)
T 3pfq_A          590 EGERDIKEHAFFR  602 (674)
T ss_dssp             THHHHHHSSGGGS
T ss_pred             CcHHHHhcCcccc
Confidence               9999999996

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=8e-41  Score=269.43  Aligned_cols=217  Identities=17%  Similarity=0.249  Sum_probs=160.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      .....+.+.+|+.++++++||||+++++++...      +..++++|++ +++|.+++.                  ...
T Consensus        68 ~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~------------------~~~  128 (367)
T 2fst_X           68 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK------------------CQK  128 (367)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----------------------CC
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHh------------------cCC
Confidence            445678899999999999999999999998654      4579999999 568866554                  245


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-CCCccccccccCceecCCCCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +++..+..++.||+.||.|||+.|++||||||+||+++.        ||++...... ....+|+.|+|||.+.+ ...+
T Consensus       129 l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~-~~~~  207 (367)
T 2fst_X          129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLN-WMHY  207 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC---------------CCCTTCCHHHHTT-CCSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcCccChHHHcC-CcCC
Confidence            889999999999999999999999999999999999976        7776544332 23466999999999875 3468


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------CCC--CCCCCCCCcccccHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------QVA--PNEDTTHGTRTLSKN  214 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~--~~~~~~~~~~~~~~~  214 (245)
                      +.++|||||||++|+|++|+.||.+.+..+....+..........               ...  +...........++.
T Consensus       208 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (367)
T 2fst_X          208 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL  287 (367)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHH
Confidence            899999999999999999999999887776666555432211000               000  000000111346788


Q ss_pred             HHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          215 FWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       215 ~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.++|.+||+.||.+|||++++++||||.
T Consensus       288 ~~dLl~~mL~~dP~~R~t~~e~L~hp~~~  316 (367)
T 2fst_X          288 AVDLLEKMLVLDSDKRITAAQALAHAYFA  316 (367)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HHHHHHHhCCCCcccCcCHHHHhcChhhh
Confidence            99999999999999999999999999986

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=3e-40  Score=259.97  Aligned_cols=205  Identities=19%  Similarity=0.283  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEE--eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMI--SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +..+.+.+|++++++++||||+++++++.  ..+..++||||++++ |.+++.               ......+++..+
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~---------------~~~~~~~~~~~~  111 (305)
T 2wtk_C           48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLD---------------SVPEKRFPVCQA  111 (305)
T ss_dssp             THHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHH---------------HSTTCSCCHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHH---------------hCcccccCHHHH
Confidence            35678999999999999999999999984  455789999999986 655443               222456899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------CCCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------SSSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||.|||++|++|+||||+||+++.        ||.+.....      .....+++.|+|||.+.+.....+
T Consensus       112 ~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  191 (305)
T 2wtk_C          112 HGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSG  191 (305)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEES
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCc
Confidence            999999999999999999999999999999975        666543321      123456999999999976333457


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++||||||+++|+|++|..||...+.......+.....              ..+..+++.+.+++.+||+.||.+|||
T Consensus       192 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~--------------~~~~~~~~~l~~li~~~l~~dp~~Rps  257 (305)
T 2wtk_C          192 FKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY--------------AIPGDCGPPLSDLLKGMLEYEPAKRFS  257 (305)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC--------------CCCSSSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCC--------------CCCCccCHHHHHHHHHHccCChhhCCC
Confidence            899999999999999999999998766655554443221              111457899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       258 ~~~ll~~~~~~  268 (305)
T 2wtk_C          258 IRQIRQHSWFR  268 (305)
T ss_dssp             HHHHHHSHHHH
T ss_pred             HHHHhcCcccc
Confidence            99999999985

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.7e-40  Score=268.09  Aligned_cols=215  Identities=16%  Similarity=0.222  Sum_probs=166.3

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEeC--------------------------------------ceeEEEeeecccCCHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMISQ--------------------------------------RQLFYAEIACMIGSLD   55 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~~--------------------------------------~~~~lv~e~~~~~~L~   55 (245)
                      ..+|+++++.++||||+++++++...                                      ...++||||+++ +|.
T Consensus        47 ~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~  125 (383)
T 3eb0_A           47 KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLH  125 (383)
T ss_dssp             CCHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSE-EHH
T ss_pred             HHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHH
Confidence            34799999999999999999998543                                      238899999995 887


Q ss_pred             HHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCcccc
Q 037274           56 SIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRN  126 (245)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~  126 (245)
                      +.+..           ..  .....+++..++.++.|++.||.|||+.|++||||||+||+++.         ||.+...
T Consensus       126 ~~l~~-----------~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  192 (383)
T 3eb0_A          126 KVLKS-----------FI--RSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL  192 (383)
T ss_dssp             HHHHH-----------HH--HTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             HHHHH-----------HH--hcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCccc
Confidence            66641           11  12467899999999999999999999999999999999999962         7777644


Q ss_pred             ccCC---CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCc---------
Q 037274          127 WISS---SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKST---------  194 (245)
Q Consensus       127 ~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------  194 (245)
                      ....   ...+|+.|+|||.+.+ ...++.++|||||||++|+|++|..||.+.+..+....+........         
T Consensus       193 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~  271 (383)
T 3eb0_A          193 IPSEPSVAYICSRFYRAPELMLG-ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNP  271 (383)
T ss_dssp             CTTSCCCCCCCCSSCCCHHHHTT-CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCT
T ss_pred             CCCCCCcCcccCCCccCHHHhcC-CCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCc
Confidence            3222   3456899999999875 34589999999999999999999999999877776666554321110         


Q ss_pred             ---cCCCC---CCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          195 ---SLQVA---PNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       195 ---~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                         ....+   ........+...++++.+++.+||+.||.+|||+.++++||||.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  326 (383)
T 3eb0_A          272 HYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFD  326 (383)
T ss_dssp             TC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGH
T ss_pred             ccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHH
Confidence               00000   01111112345788999999999999999999999999999995

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1e-40  Score=265.01  Aligned_cols=208  Identities=25%  Similarity=0.404  Sum_probs=163.0

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEe------CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMIS------QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ...+.+.+|+.+++++ +||||+++++++..      .+..++||||+++++|.+++..               .....+
T Consensus        62 ~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------~~~~~~  126 (326)
T 2x7f_A           62 DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN---------------TKGNTL  126 (326)
T ss_dssp             STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHH---------------SGGGCC
T ss_pred             ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHh---------------cccCCC
Confidence            3456789999999999 79999999999976      4679999999999999777752               123468


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCC--
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFG--  147 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~--  147 (245)
                      ++..++.++.|++.||.|||+.|++|+||||+||+++.        ||.+......    ....+++.|+|||.+...  
T Consensus       127 ~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  206 (326)
T 2x7f_A          127 KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDEN  206 (326)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC----
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccc
Confidence            89999999999999999999999999999999999975        6665543221    234569999999998631  


Q ss_pred             -CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 -DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 -~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ...++.++||||||+++|+|++|..||...........+......            ......++..+.++|.+||..|
T Consensus       207 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~li~~~l~~d  274 (326)
T 2x7f_A          207 PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP------------RLKSKKWSKKFQSFIESCLVKN  274 (326)
T ss_dssp             ----CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC------------CCSCSCSCHHHHHHHHHHCCSS
T ss_pred             cCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc------------cCCccccCHHHHHHHHHHhccC
Confidence             245789999999999999999999999886655544433322110            0112567899999999999999


Q ss_pred             CCCCccHHHHhhccccc
Q 037274          227 PAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       227 p~~Rpt~~~~l~~~~f~  243 (245)
                      |.+|||++++++||||.
T Consensus       275 p~~Rps~~~ll~hp~~~  291 (326)
T 2x7f_A          275 HSQRPATEQLMKHPFIR  291 (326)
T ss_dssp             GGGSCCHHHHHTSHHHH
T ss_pred             hhhCCCHHHHhhChHHh
Confidence            99999999999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.4e-40  Score=267.30  Aligned_cols=215  Identities=16%  Similarity=0.242  Sum_probs=160.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      .....+.+.+|+.+++.++||||+++++++...+      ..++||||+++ +|.+++.                   ..
T Consensus        64 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-------------------~~  123 (371)
T 2xrw_A           64 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-------------------ME  123 (371)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHH-------------------SC
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHh-------------------hc
Confidence            4566788999999999999999999999997654      68999999986 6755443                   24


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~  149 (245)
                      +++..+..++.|++.||.|||++|++||||||+||+++.        ||.+......   ....+|+.|+|||.+.+  .
T Consensus       124 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~  201 (371)
T 2xrw_A          124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--M  201 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------------CTTCCHHHHTT--C
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCccCHHHhcC--C
Confidence            788899999999999999999999999999999999985        7776544332   23456999999999987  5


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC--------------CCCCCCC------------
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL--------------QVAPNED------------  203 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~------------  203 (245)
                      .++.++|||||||++|+|++|..||.+.+..+....+..........              ..+....            
T Consensus       202 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (371)
T 2xrw_A          202 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLF  281 (371)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGS
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccC
Confidence            68999999999999999999999999887766666655433211000              0000000            


Q ss_pred             --CCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          204 --TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       204 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                        ........+.++.++|.+||+.||.+|||++++++||||.
T Consensus       282 ~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~  323 (371)
T 2xrw_A          282 PADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN  323 (371)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred             cccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchh
Confidence              0000012267899999999999999999999999999985

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=4e-40  Score=257.22  Aligned_cols=205  Identities=20%  Similarity=0.297  Sum_probs=168.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++||||+++++++...+..++++|++++++|.+++..                 ...+++..++.
T Consensus        63 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~  125 (287)
T 2wei_A           63 KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK-----------------RKRFSEHDAAR  125 (287)
T ss_dssp             SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-----------------HSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHh-----------------cCCCCHHHHHH
Confidence            3567899999999999999999999999999999999999999999666542                 24588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecCCCCCCCch
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ++.|++.||.|||++|++|+||||+||+++.           ||.+.......   ...+++.|+|||.+.+   .++.+
T Consensus       126 i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~  202 (287)
T 2wei_A          126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG---TYDEK  202 (287)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT---CCCTH
T ss_pred             HHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcC---CCCCc
Confidence            9999999999999999999999999999953           56554333222   2335889999999874   38899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||...+..+....+.......   .       ......+++++.+++.+||+.||.+|||++
T Consensus       203 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  272 (287)
T 2wei_A          203 CDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF---D-------LPQWRTISDDAKDLIRKMLTFHPSLRITAT  272 (287)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---C-------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC---C-------chhhhhcCHHHHHHHHHHcccChhhCcCHH
Confidence            999999999999999999999877666655554332110   0       011145789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       273 ell~hp~~~  281 (287)
T 2wei_A          273 QCLEHPWIQ  281 (287)
T ss_dssp             HHHHSHHHH
T ss_pred             HHhcCHHHh
Confidence            999999985

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=8.5e-41  Score=265.14  Aligned_cols=207  Identities=19%  Similarity=0.208  Sum_probs=160.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+.+|++++++++||||+++++++..++ .++||||+++++|.+++..                 ...+++..++.+
T Consensus        58 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~-----------------~~~~~~~~~~~~  119 (322)
T 2ycf_A           58 PALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-----------------NKRLKEATCKLY  119 (322)
T ss_dssp             ---CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHST-----------------TCCCCHHHHHHH
T ss_pred             hhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhc-----------------cCCCCHHHHHHH
Confidence            4456889999999999999999999986654 8999999999999776642                 356889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecC-CCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNF-GDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~-~~~~~~~~  154 (245)
                      +.|++.||.|||++|++|+||||+||+++.           ||.+.......   ...+++.|+|||.+.+ +...++.+
T Consensus       120 ~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  199 (322)
T 2ycf_A          120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA  199 (322)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTH
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCch
Confidence            999999999999999999999999999964           55554332221   2346899999999752 23568899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +||||||+++|+|++|..||....................         .......+++.+.+++.+||+.||.+|||++
T Consensus       200 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~  270 (322)
T 2ycf_A          200 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF---------IPEVWAEVSEKALDLVKKLLVVDPKARFTTE  270 (322)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCC---------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcccc---------CchhhhhcCHHHHHHHHHHcccCHhhCCCHH
Confidence            9999999999999999999987544322222222211000         0011145788999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       271 ~~l~h~~~~  279 (322)
T 2ycf_A          271 EALRHPWLQ  279 (322)
T ss_dssp             HHHTSGGGC
T ss_pred             HHhhCcCcC
Confidence            999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-40  Score=263.32  Aligned_cols=218  Identities=20%  Similarity=0.273  Sum_probs=165.3

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc--eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQR--QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +..+.+.+|++++++++||||+++++++...+  ..++||||+++++|.+++...              .....+++..+
T Consensus        49 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------------~~~~~~~~~~~  114 (319)
T 4euu_A           49 RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP--------------SNAYGLPESEF  114 (319)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSG--------------GGTTCCCHHHH
T ss_pred             chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHh--------------ccccCCCHHHH
Confidence            34677889999999999999999999987655  689999999999998877531              12334899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceec----cc--------ccCccccccCC---CCccccccccCceecC-----
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILH----NI--------FNDDTRNWISS---SSSITTWAAAPEVVNF-----  146 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~----~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~-----  146 (245)
                      +.++.|++.||.|||+.|++|+||||+||++    +.        ||.+.......   ...+|+.|+|||.+..     
T Consensus       115 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  194 (319)
T 4euu_A          115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRK  194 (319)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCC
T ss_pred             HHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccc
Confidence            9999999999999999999999999999998    32        77776543332   3457999999999862     


Q ss_pred             -CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCc----hHHHHHHHhcCCCCccCCCC-----------CCCCCCCCccc
Q 037274          147 -GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQD----LDIMTKMLMKQPKSTSLQVA-----------PNEDTTHGTRT  210 (245)
Q Consensus       147 -~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~  210 (245)
                       ....++.++|||||||++|+|++|..||.....    ...+..+....+........           ...........
T Consensus       195 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (319)
T 4euu_A          195 DHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRG  274 (319)
T ss_dssp             CCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHH
T ss_pred             cccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchh
Confidence             125688999999999999999999999975333    33344443332211000000           00011122355


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhcc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQE  240 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~  240 (245)
                      ++..+.+++.+||+.||.+|||++++++||
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          275 LQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             HHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            677899999999999999999999999986

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=3.3e-40  Score=265.43  Aligned_cols=220  Identities=16%  Similarity=0.244  Sum_probs=168.4

Q ss_pred             ccHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCce-eEEEeeecccCCHHHHHhcCCCCChh----------------
Q 037274            6 HQAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQ-LFYAEIACMIGSLDSIMTYRPLNSPA----------------   67 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~----------------   67 (245)
                      ......+.+.+|+++++++ +||||+++++++...+. .++||||+++|+|.+++.........                
T Consensus        64 ~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  143 (359)
T 3vhe_A           64 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVG  143 (359)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------
T ss_pred             CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhccccccc
Confidence            4456678899999999999 78999999999887554 89999999999999999754321000                


Q ss_pred             ----h-----------------------------HHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCc
Q 037274           68 ----A-----------------------------TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGH  114 (245)
Q Consensus        68 ----~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~n  114 (245)
                          .                             ............+++..++.++.|++.||+|||++|++|+||||+|
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~N  223 (359)
T 3vhe_A          144 AIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  223 (359)
T ss_dssp             ----------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             ccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhh
Confidence                0                             0000000012338899999999999999999999999999999999


Q ss_pred             eeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCc
Q 037274          115 ILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQD  179 (245)
Q Consensus       115 il~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~  179 (245)
                      |+++.        ||.+.......      ...+|+.|+|||.+.+  ..++.++||||||+++|+|++ |..||.+...
T Consensus       224 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  301 (359)
T 3vhe_A          224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  301 (359)
T ss_dssp             EEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             EEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcC--CCCCchhhhhhHHHHHHHHHhcCCCCCCccch
Confidence            99975        77765432221      3345788999999987  668999999999999999998 9999988765


Q ss_pred             hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          180 LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ..............     .       .+..+++++.+++..||+.||.+|||+.++++|
T Consensus       302 ~~~~~~~~~~~~~~-----~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          302 DEEFCRRLKEGTRM-----R-------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             SHHHHHHHHHTCCC-----C-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHcCCCC-----C-------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            55444443332111     1       114578899999999999999999999999876

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=7.2e-41  Score=273.38  Aligned_cols=223  Identities=18%  Similarity=0.244  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .+.+.+|+.++++|+||||+++++++..  +...++||||+++ +|.+++....        ..........+++..++.
T Consensus        62 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~--------~~~~~~~~~~l~~~~~~~  132 (405)
T 3rgf_A           62 SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHR--------ASKANKKPVQLPRGMVKS  132 (405)
T ss_dssp             CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHH--------HHC-------CCHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhc--------cccccccccCCCHHHHHH
Confidence            3568899999999999999999999954  6679999999986 7877664210        000011223589999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceec----cc--------ccCccccccC-------CCCccccccccCceecCCCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILH----NI--------FNDDTRNWIS-------SSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~----~~--------f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~  149 (245)
                      ++.||+.||.|||+.||+||||||+|||+    +.        ||++......       ....+|+.|+|||.+.+ ..
T Consensus       133 i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~  211 (405)
T 3rgf_A          133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG-AR  211 (405)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTT-CC
T ss_pred             HHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcC-CC
Confidence            99999999999999999999999999999    32        7777654321       23456999999999875 34


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCch---------HHHHHHHhcCCCCccCCCCCCCC-------------C---
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDL---------DIMTKMLMKQPKSTSLQVAPNED-------------T---  204 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-------------~---  204 (245)
                      .++.++|||||||++|+|++|..||.+....         +.+..+.................             .   
T Consensus       212 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (405)
T 3rgf_A          212 HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT  291 (405)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGT
T ss_pred             cccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCC
Confidence            5899999999999999999999999765432         33333333221111000000000             0   


Q ss_pred             --------CCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          205 --------THGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       205 --------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                              .......++.+.+||.+||..||.+|||++++++||||.
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~  338 (405)
T 3rgf_A          292 NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFL  338 (405)
T ss_dssp             TCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             cchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhc
Confidence                    000012367889999999999999999999999999995

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=5.3e-40  Score=254.26  Aligned_cols=205  Identities=17%  Similarity=0.255  Sum_probs=164.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+..+.+.+|+.++++++||||+++++++.+.  +..++|+||+++|+|.+++..               .....+++.
T Consensus        47 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------~~~~~~~~~  111 (271)
T 3kmu_A           47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHE---------------GTNFVVDQS  111 (271)
T ss_dssp             CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHS---------------CSSCCCCHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhh---------------cccCCCCHH
Confidence            456678899999999999999999999999876  778999999999999777753               223468999


Q ss_pred             HHHHHHHHHHHHHHHHHhCC--cccccCCCCceeccc--------ccCccccccCCCCccccccccCceecCCC-CCCCc
Q 037274           85 CLAIAHKETLKGLSYLQGEG--LFHKNISAGHILHNI--------FNDDTRNWISSSSSITTWAAAPEVVNFGD-DYYSC  153 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~--ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~  153 (245)
                      .++.++.|++.||.|||+.|  ++|+||||+||+++.        ++.+.. .......+|+.|+|||.+.+.. ..++.
T Consensus       112 ~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~  190 (271)
T 3kmu_A          112 QAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS-FQSPGRMYAPAWVAPEALQKKPEDTNRR  190 (271)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT-TSCTTCBSCGGGSCHHHHHSCGGGSCHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceee-ecccCccCCccccChhhhccCCCCCCCc
Confidence            99999999999999999999  999999999999986        333322 1223456699999999998621 22344


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++||||||+++|+|++|..||...................            ..+..+++++.+++.+||+.||.+|||+
T Consensus       191 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~  258 (271)
T 3kmu_A          191 SADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP------------TIPPGISPHVSKLMKICMNEDPAKRPKF  258 (271)
T ss_dssp             HHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCC------------CCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            8999999999999999999999877666555544332111            1125678999999999999999999999


Q ss_pred             HHHhhc
Q 037274          234 EAQVLQ  239 (245)
Q Consensus       234 ~~~l~~  239 (245)
                      +++++.
T Consensus       259 ~~il~~  264 (271)
T 3kmu_A          259 DMIVPI  264 (271)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998863

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=5e-40  Score=263.29  Aligned_cols=223  Identities=17%  Similarity=0.242  Sum_probs=168.4

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|+.++++++||||+++++++.+++..++||||+++++|.+++...         ..........+++..++.++
T Consensus        87 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~---------~~l~~~~~~~~~~~~~~~i~  157 (348)
T 2pml_X           87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYF---------FVLDKNYTCFIPIQVIKCII  157 (348)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSE---------ESSCSSSCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHh---------hhhhhccccCCCHHHHHHHH
Confidence            378999999999999999999999999999999999999999997663210         00111224678999999999


Q ss_pred             HHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCcccccc--CCCCccccccccCceecCCCCCCCc-hhhHH
Q 037274           91 KETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWI--SSSSSITTWAAAPEVVNFGDDYYSC-KSDIW  158 (245)
Q Consensus        91 ~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~-~~Dvw  158 (245)
                      .|++.||.|||+ .|++|+||+|+||+++.        ||.+.....  .....+++.|+|||.+.+ ...++. ++|||
T Consensus       158 ~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~~Di~  236 (348)
T 2pml_X          158 KSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSN-ESSYNGAKVDIW  236 (348)
T ss_dssp             HHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSS-CCCEEHHHHHHH
T ss_pred             HHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcC-CCCCCcchhhHH
Confidence            999999999999 99999999999999976        666554322  234566999999999986 224555 99999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCCCccCCC--C---CCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          159 LIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPKSTSLQV--A---PNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      |||+++|+|++|..||..... ......+............  .   ...........+++++.+++.+||+.||.+|||
T Consensus       237 slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps  316 (348)
T 2pml_X          237 SLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT  316 (348)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCC
Confidence            999999999999999998766 4444443322111000000  0   000001111567899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       317 ~~e~l~hp~f~  327 (348)
T 2pml_X          317 SEDALKHEWLA  327 (348)
T ss_dssp             HHHHHTSGGGT
T ss_pred             HHHHhcCcccc
Confidence            99999999996

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=9e-40  Score=264.92  Aligned_cols=218  Identities=17%  Similarity=0.253  Sum_probs=172.4

Q ss_pred             ccHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            6 HQAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ...+..+.+.+|+++++++ +||||+++++++..++..++||||+++|+|.+++............ .........+++.
T Consensus       113 ~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~-~~~~~~~~~l~~~  191 (382)
T 3tt0_A          113 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY-NPSHNPEEQLSSK  191 (382)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCC-CCCSSCCCCCCHH
T ss_pred             cCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhccccccccc-ccccccccccCHH
Confidence            4566778899999999999 8999999999999999999999999999998888643211000000 0000113468999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      .++.++.|++.||.|||+.|++||||||+||+++.        ||.+......      ....+++.|+|||.+.+  ..
T Consensus       192 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~  269 (382)
T 3tt0_A          192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD--RI  269 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHS--CC
T ss_pred             HHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcC--CC
Confidence            99999999999999999999999999999999985        7777644322      12344788999999987  66


Q ss_pred             CCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      ++.++||||||+++|+|++ |..||......+....+.....      ..       .+..+++++.+++.+||+.||.+
T Consensus       270 ~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~l~~li~~~l~~dP~~  336 (382)
T 3tt0_A          270 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR------MD-------KPSNCTNELYMMMRDCWHAVPSQ  336 (382)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC------CC-------CCSSCCHHHHHHHHHHTCSSGGG
T ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC------CC-------CCccCCHHHHHHHHHHcCCChhh
Confidence            8999999999999999999 9999988776665555443321      11       11567899999999999999999


Q ss_pred             CccHHHHhhc
Q 037274          230 RPAAEAQVLQ  239 (245)
Q Consensus       230 Rpt~~~~l~~  239 (245)
                      |||+.+++++
T Consensus       337 Rps~~ell~~  346 (382)
T 3tt0_A          337 RPTFKQLVED  346 (382)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999875

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=3.1e-40  Score=265.90  Aligned_cols=219  Identities=18%  Similarity=0.247  Sum_probs=164.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe-----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS-----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      .....+.+.+|++++++++||||+++++++..     ....++|||++++ +|.+++..                ....+
T Consensus        69 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----------------~~~~~  131 (362)
T 3pg1_A           69 DSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD----------------QRIVI  131 (362)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHC----------------TTSCC
T ss_pred             hhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHh----------------cccCC
Confidence            44566889999999999999999999999854     2358999999985 77555532                23468


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ++..+..++.|++.||.|||++|++|+||||+||+++.        ||.+.......   ...+++.|+|||.+.+ ...
T Consensus       132 ~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~  210 (362)
T 3pg1_A          132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ-FKG  210 (362)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTT-CTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcC-CCC
Confidence            99999999999999999999999999999999999975        77665332222   3456899999999875 345


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc------------------CCCCCCCCCCCCccccc
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS------------------LQVAPNEDTTHGTRTLS  212 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~  212 (245)
                      ++.++|||||||++|+|++|+.||.+.+.......+.........                  ....+...........+
T Consensus       211 ~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (362)
T 3pg1_A          211 FTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTAD  290 (362)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSC
T ss_pred             CCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCC
Confidence            899999999999999999999999987776666555432211100                  00000001111124567


Q ss_pred             HHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          213 KNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       213 ~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.+.++|.+||+.||.+|||+.++++||||+
T Consensus       291 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  321 (362)
T 3pg1_A          291 PVALDLIAKMLEFNPQRRISTEQALRHPYFE  321 (362)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGT
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHHcCchhh
Confidence            8899999999999999999999999999996

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=4.4e-40  Score=265.72  Aligned_cols=202  Identities=21%  Similarity=0.308  Sum_probs=160.1

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ...+..+.+.+|+.++++++||||+++++++..++..++||||+++|+|.+++..                ....+++..
T Consensus        85 ~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~----------------~~~~~~~~~  148 (373)
T 2qol_A           85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----------------HDAQFTVIQ  148 (373)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT----------------TTTCSCHHH
T ss_pred             cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHh----------------CCCCCCHHH
Confidence            3566778899999999999999999999999999999999999999999877752                134688999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~  150 (245)
                      +..++.|++.||.|||+.|++||||||+||+++.        ||++.......       ...+++.|+|||.+.+  ..
T Consensus       149 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~  226 (373)
T 2qol_A          149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RK  226 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHH--CC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhcc--CC
Confidence            9999999999999999999999999999999976        77665443221       1123678999999987  56


Q ss_pred             CCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      ++.++||||||+++|++++ |..||...........+....      ..+.       +..++..+.+++..||+.||.+
T Consensus       227 ~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~------~~~~-------~~~~~~~l~~li~~cl~~dp~~  293 (373)
T 2qol_A          227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY------RLPP-------PMDCPAALYQLMLDCWQKDRNN  293 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTE------ECCC-------CTTCBHHHHHHHHHHTCSSGGG
T ss_pred             cCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CCCC-------CccccHHHHHHHHHHhCcChhh
Confidence            8999999999999999997 999998877666555543322      1111       1467899999999999999999


Q ss_pred             CccHHHHhh
Q 037274          230 RPAAEAQVL  238 (245)
Q Consensus       230 Rpt~~~~l~  238 (245)
                      ||++.++++
T Consensus       294 RPs~~~i~~  302 (373)
T 2qol_A          294 RPKFEQIVS  302 (373)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999875

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.9e-40  Score=269.95  Aligned_cols=215  Identities=15%  Similarity=0.169  Sum_probs=163.8

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ..+|++++++|+||||+++++++...      ...++|+||+++ +|.+++..           .  ......+++..++
T Consensus        94 ~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-----------~--~~~~~~l~~~~~~  159 (420)
T 1j1b_A           94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARH-----------Y--SRAKQTLPVIYVK  159 (420)
T ss_dssp             CCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHH-----------H--HHTTCCCCHHHHH
T ss_pred             HHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHH-----------H--hhccCCCCHHHHH
Confidence            45799999999999999999988542      236799999986 66554431           1  1124678999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC---CCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.||+.||.|||+.||+||||||+|||++.         ||+++.....   ....+|+.|+|||++.+ ...++.++
T Consensus       160 ~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~  238 (420)
T 1j1b_A          160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG-ATDYTSSI  238 (420)
T ss_dssp             HHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTT-CSSCCTHH
T ss_pred             HHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcC-CCCCCchh
Confidence            99999999999999999999999999999984         7777643322   23466999999999875 34689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCC------------ccCCCCCC---CCCCCCcccccHHHHHHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKS------------TSLQVAPN---EDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~---~~~~~~~~~~~~~~~~li~  220 (245)
                      |||||||++|+|++|+.||.+.+..+.+..+.......            .....+..   .+........++++.+||.
T Consensus       239 DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~  318 (420)
T 1j1b_A          239 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCS  318 (420)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHH
Confidence            99999999999999999999887766665554432111            00011000   0000112456889999999


Q ss_pred             HhcCCCCCCCccHHHHhhccccc
Q 037274          221 ICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +||+.||.+|||+.++++||||.
T Consensus       319 ~~L~~dP~~R~t~~e~l~hp~f~  341 (420)
T 1j1b_A          319 RLLEYTPTARLTPLEACAHSFFD  341 (420)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             HhccCChhHCCCHHHHhCCHhhc
Confidence            99999999999999999999995

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=6.2e-40  Score=260.24  Aligned_cols=211  Identities=16%  Similarity=0.287  Sum_probs=161.3

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCcee------EEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQL------FYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~------~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      .....+.+.+|++++++++||||+++++++...+..      ++++||+++|+|.+++...           ........
T Consensus        65 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-----------~~~~~~~~  133 (323)
T 3qup_A           65 ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS-----------RIGENPFN  133 (323)
T ss_dssp             -CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHH-----------HC---CCC
T ss_pred             CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhh-----------hccccccc
Confidence            345678899999999999999999999999876654      9999999999998877521           11112236


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNF  146 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~  146 (245)
                      +++..++.++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ...+++.|+|||.+.+
T Consensus       134 ~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (323)
T 3qup_A          134 LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLAD  213 (323)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcC
Confidence            899999999999999999999999999999999999986        77665443222      2234678999999987


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCC
Q 037274          147 GDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP  225 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  225 (245)
                        ..++.++||||||+++|+|++ |..||.+.+.......+.....      ..       ....+++++.+++.+||+.
T Consensus       214 --~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~l~~li~~~l~~  278 (323)
T 3qup_A          214 --NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR------LK-------QPPECMEEVYDLMYQCWSA  278 (323)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC------CC-------CCTTCCHHHHHHHHHTTCS
T ss_pred             --CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCC------CC-------CCCccCHHHHHHHHHHccC
Confidence              668999999999999999999 9999998877776666544331      11       1156789999999999999


Q ss_pred             CCCCCcc-------HHHHhhccccc
Q 037274          226 DPAKRPA-------AEAQVLQEMWH  243 (245)
Q Consensus       226 ~p~~Rpt-------~~~~l~~~~f~  243 (245)
                      ||.+|||       +++++.|+|+.
T Consensus       279 dp~~Rps~~~l~~~l~~~l~~~~~~  303 (323)
T 3qup_A          279 DPKQRPSFTCLRMELENILGHLSVL  303 (323)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHC----
T ss_pred             ChhhCcCHHHHHHHHHHHHHHhhhc
Confidence            9999999       67788888863

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2.5e-40  Score=257.34  Aligned_cols=209  Identities=18%  Similarity=0.239  Sum_probs=168.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      .....+.+.+|+.++++++||||+++++++..  .+..++||||+++++|.+++..             .......+++.
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-------------~~~~~~~~~~~  111 (279)
T 2w5a_A           45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-------------GTKERQYLDEE  111 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHH-------------HHHTTCCCCHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHh-------------hcccCCCCCHH
Confidence            45667889999999999999999999998754  5679999999999999887752             11123458999


Q ss_pred             HHHHHHHHHHHHHHHHHhCC-----cccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCC
Q 037274           85 CLAIAHKETLKGLSYLQGEG-----LFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~-----ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~  147 (245)
                      .++.++.|++.||.|||+.|     ++|+||||+||+++.        ||.+.......    ...+++.|+|||.+.+ 
T Consensus       112 ~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-  190 (279)
T 2w5a_A          112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR-  190 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHHhcc-
Confidence            99999999999999999999     999999999999986        55543332211    2345889999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                       ..++.++||||||+++|+|++|..||...+.......+......             ..+..+++++.+++.+||+.||
T Consensus       191 -~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~l~~li~~~l~~~p  256 (279)
T 2w5a_A          191 -MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-------------RIPYRYSDELNEIITRMLNLKD  256 (279)
T ss_dssp             -C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-------------CCCTTSCHHHHHHHHHHTCSSG
T ss_pred             -CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccc-------------cCCcccCHHHHHHHHHHcCCCc
Confidence             56899999999999999999999999987766555554433210             1114578999999999999999


Q ss_pred             CCCccHHHHhhccccc
Q 037274          228 AKRPAAEAQVLQEMWH  243 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~f~  243 (245)
                      .+|||++++++|+|+.
T Consensus       257 ~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          257 YHRPSVEEILENPLIL  272 (279)
T ss_dssp             GGSCCHHHHHTSTTCC
T ss_pred             ccCCCHHHHHhChhhh
Confidence            9999999999999985

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.7e-40  Score=256.82  Aligned_cols=199  Identities=19%  Similarity=0.318  Sum_probs=164.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+++..++|||++++++|.+++..                ....+++..++.+
T Consensus        46 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~i  109 (268)
T 3sxs_A           46 SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS----------------HGKGLEPSQLLEM  109 (268)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHH----------------HGGGCCHHHHHHH
T ss_pred             cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHH----------------cCCCCCHHHHHHH
Confidence            446789999999999999999999999999999999999999999877752                1235889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||+|||+.|++|+||||+||+++.        ||.+.......     ...+++.|+|||.+.+  ..++.++|
T Consensus       110 ~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  187 (268)
T 3sxs_A          110 CYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHY--FKYSSKSD  187 (268)
T ss_dssp             HHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHH--SEEETTHH
T ss_pred             HHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhc--cCCchhhh
Confidence            999999999999999999999999999976        66654332221     2334678999999987  56889999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||+++|+|++ |..||.................      ...       +...++.+.+++..||+.||.+|||+.+
T Consensus       188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~  254 (268)
T 3sxs_A          188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHR------LYR-------PHLASDTIYQIMYSCWHELPEKRPTFQQ  254 (268)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC------CCC-------CTTSCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             hHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCC------CCC-------CCcChHHHHHHHHHHcCCChhhCcCHHH
Confidence            9999999999999 9999988776665555443321      111       1456889999999999999999999999


Q ss_pred             Hhhc
Q 037274          236 QVLQ  239 (245)
Q Consensus       236 ~l~~  239 (245)
                      ++++
T Consensus       255 ll~~  258 (268)
T 3sxs_A          255 LLSS  258 (268)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9876

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.5e-42  Score=279.53  Aligned_cols=207  Identities=12%  Similarity=0.159  Sum_probs=155.4

Q ss_pred             cHHHHHHHHHHHH---HHhhCCCCCeeeEE-------EEEEeCce-----------------eEEEeeecccCCHHHHHh
Q 037274            7 QAEEYAKLAREIY---RYKHLSHPNIIPIY-------KTMISQRQ-----------------LFYAEIACMIGSLDSIMT   59 (245)
Q Consensus         7 ~~~~~~~~~~E~~---~l~~l~h~~Iv~~~-------~~~~~~~~-----------------~~lv~e~~~~~~L~~~~~   59 (245)
                      .....+.+.+|+.   .+++++||||++++       +++.+++.                 .+++|||+ +|+|.+++.
T Consensus       113 ~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~  191 (377)
T 3byv_A          113 PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGE  191 (377)
T ss_dssp             CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHH
Confidence            4456788999994   55556899999998       76665542                 89999999 479988886


Q ss_pred             cCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-C
Q 037274           60 YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-S  130 (245)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~  130 (245)
                      ..          .........+++..++.++.||+.||+|||++|++||||||+|||++.        ||++...... .
T Consensus       192 ~~----------~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~  261 (377)
T 3byv_A          192 VL----------LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVV  261 (377)
T ss_dssp             HH----------HHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEE
T ss_pred             hc----------cccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCccc
Confidence            31          000001123556888899999999999999999999999999999975        7777644332 2


Q ss_pred             CCccccccccCceecCC---------CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCC
Q 037274          131 SSSITTWAAAPEVVNFG---------DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPN  201 (245)
Q Consensus       131 ~~~~~~~y~aPE~~~~~---------~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (245)
                      ...+ +.|+|||.+.+.         ...++.++|||||||++|+|++|+.||...+.......+.              
T Consensus       262 ~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~--------------  326 (377)
T 3byv_A          262 SSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF--------------  326 (377)
T ss_dssp             CCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGG--------------
T ss_pred             CCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhh--------------
Confidence            3455 999999999862         0168999999999999999999999997644322111110              


Q ss_pred             CCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          202 EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       202 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                          .....+++++.++|.+||+.||.+|||+.++++||||.
T Consensus       327 ----~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~  364 (377)
T 3byv_A          327 ----RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE  364 (377)
T ss_dssp             ----SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred             ----hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence                01146789999999999999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=4.3e-40  Score=264.15  Aligned_cols=218  Identities=19%  Similarity=0.215  Sum_probs=167.5

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC-----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ-----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      ........+.+|+.++++++||||+++++++..+     +..++++|++.+ +|.+++.                  ...
T Consensus        48 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~------------------~~~  108 (353)
T 2b9h_A           48 DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVIS------------------TQM  108 (353)
T ss_dssp             SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHHHH------------------HCC
T ss_pred             ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccCc-cHHHHHh------------------hcC
Confidence            4456677889999999999999999999987654     678999999985 8866654                  145


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC--------------CCCcccccc
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS--------------SSSSITTWA  138 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~--------------~~~~~~~~y  138 (245)
                      +++..+..++.|++.||.|||++|++|+||||+||+++.        ||.+......              ....+|+.|
T Consensus       109 ~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  188 (353)
T 2b9h_A          109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY  188 (353)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccc
Confidence            889999999999999999999999999999999999975        7766543321              123568999


Q ss_pred             ccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCC----------------C--C
Q 037274          139 AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQV----------------A--P  200 (245)
Q Consensus       139 ~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------------~--~  200 (245)
                      +|||.+.. ...++.++|||||||++|+|++|..||.+.+.......+............                +  .
T Consensus       189 ~aPE~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (353)
T 2b9h_A          189 RAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYP  267 (353)
T ss_dssp             CCHHHHHS-CCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCC
T ss_pred             cCCeeecc-CCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCC
Confidence            99998764 356899999999999999999999999987765555444332211110000                0  0


Q ss_pred             CCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          201 NEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       201 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..........+++++.+++.+||+.||.+|||++++++||||.
T Consensus       268 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  310 (353)
T 2b9h_A          268 AAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ  310 (353)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             CcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence            0000011135788999999999999999999999999999985

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.4e-41  Score=269.53  Aligned_cols=207  Identities=18%  Similarity=0.173  Sum_probs=163.7

Q ss_pred             HHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+.+|+++++++ +||||+++++++..++..++||||+++++|.+++..                 ...+++..+..
T Consensus       101 ~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~  163 (355)
T 1vzo_A          101 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ-----------------RERFTEHEVQI  163 (355)
T ss_dssp             SGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHH-----------------HSCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHH-----------------cCCCCHHHHHH
Confidence            445677899999999 699999999999999999999999999999777652                 24588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-----CCCCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-----SSSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.|++.||.|||+.|++||||||+|||++.        ||++.....     .....+|+.|+|||.+.++...++.++
T Consensus       164 ~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  243 (355)
T 1vzo_A          164 YVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAV  243 (355)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHH
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchh
Confidence            9999999999999999999999999999976        776653322     123457999999999986445678999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc----
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP----  231 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp----  231 (245)
                      |||||||++|+|++|..||...........+.......   ..       ..+..++..+.++|.+||+.||.+||    
T Consensus       244 DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~---~~-------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~  313 (355)
T 1vzo_A          244 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS---EP-------PYPQEMSALAKDLIQRLLMKDPKKRLGCGP  313 (355)
T ss_dssp             HHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC---CC-------CCCTTSCHHHHHHHHHHTCSSGGGSTTSST
T ss_pred             hHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc---CC-------CCCcccCHHHHHHHHHHhhhCHHHhcCCCC
Confidence            99999999999999999997643322222221111000   00       11255788999999999999999999    


Q ss_pred             -cHHHHhhccccc
Q 037274          232 -AAEAQVLQEMWH  243 (245)
Q Consensus       232 -t~~~~l~~~~f~  243 (245)
                       +++++++||||.
T Consensus       314 ~s~~ell~h~~f~  326 (355)
T 1vzo_A          314 RDADEIKEHLFFQ  326 (355)
T ss_dssp             TTHHHHHTSGGGT
T ss_pred             CCHHHHHcCcchh
Confidence             999999999995

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=5.7e-40  Score=259.36  Aligned_cols=219  Identities=19%  Similarity=0.285  Sum_probs=170.4

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChh-------hHHHHhhhccC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPA-------ATQLIMSNRHR   78 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~-------~~~~~~~~~~~   78 (245)
                      ...+..+.+.+|++++++++||||+++++++..++..++||||+++++|.+++.......+.       ...........
T Consensus        65 ~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (314)
T 2ivs_A           65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE  144 (314)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------
T ss_pred             CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccc
Confidence            34667788999999999999999999999999999999999999999999988743221000       00000011123


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCcee
Q 037274           79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVV  144 (245)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~  144 (245)
                      ..+++..++.++.|++.||.|||++|++|+||||+||+++.        ||.+......      ....+++.|+|||.+
T Consensus       145 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  224 (314)
T 2ivs_A          145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL  224 (314)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHH
T ss_pred             cCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhh
Confidence            45889999999999999999999999999999999999975        7766543322      123447889999999


Q ss_pred             cCCCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhc
Q 037274          145 NFGDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL  223 (245)
Q Consensus       145 ~~~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  223 (245)
                      .+  ..++.++||||||+++|+|++ |..||.+.........+.....      .       ..+..+++++.+++.+||
T Consensus       225 ~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~li~~~l  289 (314)
T 2ivs_A          225 FD--HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHR------M-------ERPDNCSEEMYRLMLQCW  289 (314)
T ss_dssp             HH--CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC------C-------CCCTTCCHHHHHHHHHHT
T ss_pred             cC--CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCc------C-------CCCccCCHHHHHHHHHHc
Confidence            87  568999999999999999999 9999988776665554433221      1       111567899999999999


Q ss_pred             CCCCCCCccHHHHhhc
Q 037274          224 APDPAKRPAAEAQVLQ  239 (245)
Q Consensus       224 ~~~p~~Rpt~~~~l~~  239 (245)
                      +.||.+|||+++++++
T Consensus       290 ~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          290 KQEPDKRPVFADISKD  305 (314)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999999865

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=7.2e-40  Score=255.04  Aligned_cols=202  Identities=19%  Similarity=0.394  Sum_probs=159.6

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ......+.+.+|+.++++++||||+++++++ .++..++||||+++++|.+++..                ....+++..
T Consensus        55 ~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~  117 (281)
T 1mp8_A           55 TSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV----------------RKYSLDLAS  117 (281)
T ss_dssp             TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECCTTEEHHHHHHH----------------TTTTSCHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecCCCCCHHHHHHh----------------cCCCCCHHH
Confidence            3456778899999999999999999999987 45678999999999999777752                134588999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +..++.|++.||.|||+.|++|+||||+||+++.        ||.+.......     ...+++.|+|||.+.+  ..++
T Consensus       118 ~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  195 (281)
T 1mp8_A          118 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFT  195 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHH--CCCS
T ss_pred             HHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhccc--CCCC
Confidence            9999999999999999999999999999999985        77665443322     2334678999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|+|++ |..||.+....+....+.....      .+       .+..+++.+.+++.+||+.||.+||
T Consensus       196 ~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~------~~-------~~~~~~~~l~~li~~~l~~~p~~Rp  262 (281)
T 1mp8_A          196 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER------LP-------MPPNCPPTLYSLMTKCWAYDPSRRP  262 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC------CC-------CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCC------CC-------CCCCCCHHHHHHHHHHccCChhhCc
Confidence            99999999999999996 9999998777766655543321      11       1156789999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |+.+++++
T Consensus       263 s~~~l~~~  270 (281)
T 1mp8_A          263 RFTELKAQ  270 (281)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99998764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=8.5e-40  Score=261.43  Aligned_cols=219  Identities=15%  Similarity=0.246  Sum_probs=169.3

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhh-------HHHHhhhccC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAA-------TQLIMSNRHR   78 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~-------~~~~~~~~~~   78 (245)
                      ...+..+.+.+|+.++++++||||+++++++.+++..++||||+++|+|.+++..........       ..........
T Consensus        89 ~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (343)
T 1luf_A           89 ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP  168 (343)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------
T ss_pred             cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCC
Confidence            355677889999999999999999999999999999999999999999999887532111000       0000011123


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------CCCCccccccccCcee
Q 037274           79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------SSSSSITTWAAAPEVV  144 (245)
Q Consensus        79 ~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------~~~~~~~~~y~aPE~~  144 (245)
                      ..+++..++.++.||+.||.|||++|++|+||||+||+++.        ||.+.....      .....+++.|+|||.+
T Consensus       169 ~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  248 (343)
T 1luf_A          169 PPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI  248 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhh
Confidence            57899999999999999999999999999999999999976        666543321      1234458899999999


Q ss_pred             cCCCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhc
Q 037274          145 NFGDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL  223 (245)
Q Consensus       145 ~~~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  223 (245)
                      .+  ..++.++||||||+++|+|++ |..||.+.........+.....      .       ..+..+++++.+++.+||
T Consensus       249 ~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~l~~li~~~l  313 (343)
T 1luf_A          249 FY--NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI------L-------ACPENCPLELYNLMRLCW  313 (343)
T ss_dssp             HH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC------C-------CCCTTCCHHHHHHHHHHT
T ss_pred             cc--CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCc------C-------CCCCCCCHHHHHHHHHHc
Confidence            87  568999999999999999999 9999998776665555443221      0       111567899999999999


Q ss_pred             CCCCCCCccHHHHhhc
Q 037274          224 APDPAKRPAAEAQVLQ  239 (245)
Q Consensus       224 ~~~p~~Rpt~~~~l~~  239 (245)
                      +.||.+|||+.+++++
T Consensus       314 ~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          314 SKLPADRPSFCSIHRI  329 (343)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             ccCcccCCCHHHHHHH
Confidence            9999999999998764

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=6.4e-40  Score=256.30  Aligned_cols=208  Identities=18%  Similarity=0.267  Sum_probs=156.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.++...++.++||||+++++++.+++..++|||++++ +|.+++..           ..  .....+++..++.+
T Consensus        49 ~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~-----------~~--~~~~~~~~~~~~~i  114 (290)
T 3fme_A           49 QKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQ-----------VI--DKGQTIPEDILGKI  114 (290)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHHHH-----------HH--HTTCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-chHHHHHH-----------HH--hcCCCCCHHHHHHH
Confidence            344455555668889999999999999999999999999985 88766641           11  12457899999999


Q ss_pred             HHHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecC--CCCCCCchh
Q 037274           90 HKETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNF--GDDYYSCKS  155 (245)
Q Consensus        90 ~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~--~~~~~~~~~  155 (245)
                      +.|++.||.|||++ |++|+||||+||+++.        ||.+.......   ...+|+.|+|||.+..  ....++.++
T Consensus       115 ~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~  194 (290)
T 3fme_A          115 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKS  194 (290)
T ss_dssp             HHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHH
T ss_pred             HHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHH
Confidence            99999999999998 9999999999999986        66654333222   2357999999999742  135688999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      ||||||+++|+|++|..||..... ..............            .....+++++.+++.+||+.||.+|||++
T Consensus       195 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  262 (290)
T 3fme_A          195 DIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ------------LPADKFSAEFVDFTSQCLKKNSKERPTYP  262 (290)
T ss_dssp             HHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC------------cccccCCHHHHHHHHHHhhcChhhCcCHH
Confidence            999999999999999999986433 33333333222100            11145789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       263 e~l~hp~f~  271 (290)
T 3fme_A          263 ELMQHPFFT  271 (290)
T ss_dssp             HHTTSHHHH
T ss_pred             HHHhCcccc
Confidence            999999985

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=5e-40  Score=256.16  Aligned_cols=199  Identities=20%  Similarity=0.302  Sum_probs=165.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+++..++||||+++++|.+++..                ....+++..++.+
T Consensus        62 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~i  125 (283)
T 3gen_A           62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------------MRHRFQTQQLLEM  125 (283)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHC----------------GGGCCCHHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHH----------------hccCCCHHHHHHH
Confidence            346789999999999999999999999999999999999999999777752                1245889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-----CCCCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-----SSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||.|||++|++|+||||+||+++.        ||.+.....     .....+++.|+|||.+.+  ..++.++|
T Consensus       126 ~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  203 (283)
T 3gen_A          126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY--SKFSSKSD  203 (283)
T ss_dssp             HHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHH--CCCSHHHH
T ss_pred             HHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhcc--CCCCchhh
Confidence            999999999999999999999999999976        666543322     112334778999999987  56899999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||+++|+|++ |..||...+.......+.....      ..       .+...++.+.+++..||+.||.+|||+.+
T Consensus       204 v~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~  270 (283)
T 3gen_A          204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR------LY-------RPHLASEKVYTIMYSCWHEKADERPTFKI  270 (283)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC------CC-------CCTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccC------CC-------CCCcCCHHHHHHHHHHccCChhHCcCHHH
Confidence            9999999999998 9999998777666665544321      11       11456889999999999999999999999


Q ss_pred             Hhhc
Q 037274          236 QVLQ  239 (245)
Q Consensus       236 ~l~~  239 (245)
                      ++++
T Consensus       271 ll~~  274 (283)
T 3gen_A          271 LLSN  274 (283)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9876

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=6.4e-40  Score=264.82  Aligned_cols=216  Identities=21%  Similarity=0.292  Sum_probs=166.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCcee------EEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQL------FYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~------~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      .....+.+.+|+.+++.++||||+++++++...+..      ++|+|++.+ +|.+++.                   ..
T Consensus        81 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-------------------~~  140 (371)
T 4exu_A           81 SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMG-------------------ME  140 (371)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHHTT-------------------SC
T ss_pred             chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEccccc-cHHHHhh-------------------cC
Confidence            445678899999999999999999999999876654      999999984 7754442                   34


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +++..+..++.|++.||.|||++|++|+||||+||+++.        ||.+....... ...+|+.|+|||.+.+ ...+
T Consensus       141 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~-~~~~  219 (371)
T 4exu_A          141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILS-WMHY  219 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTTSCHHHHSC-CSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccccCHHHhcC-CCCC
Confidence            889999999999999999999999999999999999985        77665443322 3456999999999874 3568


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC-----------------CCCCCCCCCCCcccccHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL-----------------QVAPNEDTTHGTRTLSKN  214 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~  214 (245)
                      +.++||||||+++|+|++|..||.+.+..+....+..........                 ..............+++.
T Consensus       220 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (371)
T 4exu_A          220 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQ  299 (371)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHH
T ss_pred             CcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChH
Confidence            899999999999999999999999877766665554322111000                 000000000111356899


Q ss_pred             HHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          215 FWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       215 ~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.++|.+||+.||.+|||++++++||||.
T Consensus       300 ~~~li~~~L~~dP~~Rpt~~ell~hp~f~  328 (371)
T 4exu_A          300 AADLLEKMLELDVDKRLTAAQALTHPFFE  328 (371)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHHHCCCChhhcCCHHHHhcCcccc
Confidence            99999999999999999999999999996

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1e-39  Score=259.76  Aligned_cols=212  Identities=15%  Similarity=0.170  Sum_probs=161.7

Q ss_pred             HHHHHHHHHHHhhCC-CCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274           11 YAKLAREIYRYKHLS-HPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+.+.+|+.++++++ ||||+++++++..  ....+++||++.+++|.+++.                    .+++..+.
T Consensus        74 ~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--------------------~~~~~~~~  133 (330)
T 3nsz_A           74 KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ--------------------TLTDYDIR  133 (330)
T ss_dssp             HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG--------------------GCCHHHHH
T ss_pred             hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH--------------------hCCHHHHH
Confidence            467899999999997 9999999999987  567899999999999966553                    27788899


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC---CCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.|++.||.|||++|++||||||+||+++.         ||.+......   ....+++.|+|||.+.+ ...++.++
T Consensus       134 ~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~  212 (330)
T 3nsz_A          134 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD-YQMYDYSL  212 (330)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTT-CCCCCTHH
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcC-CCcCCchh
Confidence            99999999999999999999999999999974         7776543322   23456899999999874 35589999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCC------------CCccC-----------CCCCCCCCCCCcccc
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQP------------KSTSL-----------QVAPNEDTTHGTRTL  211 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~------------~~~~~-----------~~~~~~~~~~~~~~~  211 (245)
                      |||||||++|+|++|..||..... .+....+.....            .....           ..............+
T Consensus       213 DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (330)
T 3nsz_A          213 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV  292 (330)
T ss_dssp             HHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGC
T ss_pred             hHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccC
Confidence            999999999999999999965433 222222111100            00000           000000011112447


Q ss_pred             cHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          212 SKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       212 ~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++++.++|.+||+.||.+|||++++++||||.
T Consensus       293 ~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~  324 (330)
T 3nsz_A          293 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY  324 (330)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGT
T ss_pred             CHHHHHHHHHHhcCCcccCCCHHHHhcCccHh
Confidence            89999999999999999999999999999996

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=9.3e-40  Score=256.71  Aligned_cols=208  Identities=20%  Similarity=0.296  Sum_probs=157.9

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe-------------CceeEEEeeecccCCHHHHHhcCCCCChhhHHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS-------------QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI   72 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~   72 (245)
                      ...+..+.+.+|+.++++++||||+++++++..             .+..++|+|++++++|.+++..            
T Consensus        41 ~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------------  108 (303)
T 1zy4_A           41 HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS------------  108 (303)
T ss_dssp             EEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHH------------
T ss_pred             ccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhc------------
Confidence            455677889999999999999999999998854             3568999999999999887752            


Q ss_pred             hhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----------------
Q 037274           73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----------------  128 (245)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----------------  128 (245)
                          ....+++..++.++.|++.||.|||++|++|+||||+||+++.        ||.+.....                
T Consensus       109 ----~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~  184 (303)
T 1zy4_A          109 ----ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS  184 (303)
T ss_dssp             ----SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC----------------
T ss_pred             ----cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccc
Confidence                1234677889999999999999999999999999999999976        666554321                


Q ss_pred             --CCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCch-HHHHHHHhcCCCCccCCCCCCCCCC
Q 037274          129 --SSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL-DIMTKMLMKQPKSTSLQVAPNEDTT  205 (245)
Q Consensus       129 --~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  205 (245)
                        .....+++.|+|||.+.+ ...++.++||||||+++|+|++   ||...... .....+. ....    ..     ..
T Consensus       185 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~-~~~~----~~-----~~  250 (303)
T 1zy4_A          185 DNLTSAIGTAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLR-SVSI----EF-----PP  250 (303)
T ss_dssp             ---------CTTSCHHHHTS-CSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH-STTC----CC-----CT
T ss_pred             cccccCCCcccccCcccccC-CCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhcc-cccc----cc-----Cc
Confidence              113346899999999875 3468899999999999999998   55442222 2222221 1100    11     11


Q ss_pred             CCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          206 HGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       206 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ......++.+.+++.+||+.||.+|||++++++||||.
T Consensus       251 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (303)
T 1zy4_A          251 DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLP  288 (303)
T ss_dssp             TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSC
T ss_pred             cccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcC
Confidence            12255678899999999999999999999999999996

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=2.9e-39  Score=256.68  Aligned_cols=214  Identities=19%  Similarity=0.268  Sum_probs=166.6

Q ss_pred             HHHHHHHHHHhhC---CCCCeeeEEEEEE-----eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           12 AKLAREIYRYKHL---SHPNIIPIYKTMI-----SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        12 ~~~~~E~~~l~~l---~h~~Iv~~~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ..+.+|+.+++.+   +||||+++++++.     ..+..++|+|+++ |+|.+++..               .....+++
T Consensus        56 ~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~---------------~~~~~~~~  119 (326)
T 1blx_A           56 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDK---------------VPEPGVPT  119 (326)
T ss_dssp             CTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHH---------------SCTTCSCH
T ss_pred             chhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHh---------------cccCCCCH
Confidence            3566788777766   8999999999987     4567999999998 599776652               22345889


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc---CCCCccccccccCceecCCCCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI---SSSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.++.|++.||.|||+.|++|+||||+||+++.        ||.+.....   .....+++.|+|||.+.+  ..++
T Consensus       120 ~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  197 (326)
T 1blx_A          120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ--SSYA  197 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTT--CCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccccccceeCHHHHhc--CCCC
Confidence            999999999999999999999999999999999975        776654332   224456999999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCC-------------CCCCCCCCCcccccHHHHHHH
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQV-------------APNEDTTHGTRTLSKNFWNMV  219 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~li  219 (245)
                      .++||||||+++|+|++|..||.+.........+............             ............+++.+.+++
T Consensus       198 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  277 (326)
T 1blx_A          198 TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLL  277 (326)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHH
Confidence            9999999999999999999999988777766665543211110000             000011122256789999999


Q ss_pred             HHhcCCCCCCCccHHHHhhccccc
Q 037274          220 KICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       220 ~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+||..||.+|||+.++++||||.
T Consensus       278 ~~~L~~dP~~Rpt~~e~l~hp~~~  301 (326)
T 1blx_A          278 LKCLTFNPAKRISAYSALSHPYFQ  301 (326)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHcCCCcccCCCHHHHhcCcccc
Confidence            999999999999999999999995

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.2e-40  Score=268.02  Aligned_cols=201  Identities=18%  Similarity=0.285  Sum_probs=164.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|++++++++||||+++++++..++..++||||+++|+|.+++..                ....+++..+
T Consensus       152 ~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~----------------~~~~~~~~~~  215 (377)
T 3cbl_A          152 PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT----------------EGARLRVKTL  215 (377)
T ss_dssp             CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH----------------HGGGCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHh----------------cCCCCCHHHH
Confidence            345667899999999999999999999999988999999999999999777752                1234788999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.|++.||+|||++|++||||||+|||++.        ||++.......      ...+++.|+|||.+.+  ..++
T Consensus       216 ~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  293 (377)
T 3cbl_A          216 LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY--GRYS  293 (377)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHH--CEEE
T ss_pred             HHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhcc--CCCC
Confidence            999999999999999999999999999999975        77765432211      1223678999999987  5589


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|||++ |..||...........+....      ..+.       +..+++++.+++.+||+.||.+||
T Consensus       294 ~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~l~~li~~cl~~dP~~Rp  360 (377)
T 3cbl_A          294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG------RLPC-------PELCPDAVFRLMEQCWAYEPGQRP  360 (377)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTC------CCCC-------CTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CCCC-------CCCCCHHHHHHHHHHcCCCchhCc
Confidence            99999999999999998 999998876655554443222      1111       155788999999999999999999


Q ss_pred             cHHHHhh
Q 037274          232 AAEAQVL  238 (245)
Q Consensus       232 t~~~~l~  238 (245)
                      |++++++
T Consensus       361 s~~~i~~  367 (377)
T 3cbl_A          361 SFSTIYQ  367 (377)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3e-40  Score=260.61  Aligned_cols=199  Identities=17%  Similarity=0.216  Sum_probs=162.4

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ...+..+.+.+|++++++++||||+++++++.+++..++||||+++|+|.+++..                ....+++..
T Consensus        46 ~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~  109 (310)
T 3s95_A           46 FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS----------------MDSQYPWSQ  109 (310)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH----------------CCTTSCHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHh----------------ccCCCCHHH
Confidence            3567788899999999999999999999999999999999999999999877752                135688999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------------------CCccccccc
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------------------SSSITTWAA  139 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------------------~~~~~~~y~  139 (245)
                      +..++.|++.||+|||++|++|+||||+||+++.        ||.+.......                  ...||+.|+
T Consensus       110 ~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  189 (310)
T 3s95_A          110 RVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM  189 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGC
T ss_pred             HHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCccee
Confidence            9999999999999999999999999999999976        77665432221                  345799999


Q ss_pred             cCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHH-----HHHHHhcCCCCccCCCCCCCCCCCCcccccHH
Q 037274          140 APEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDI-----MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKN  214 (245)
Q Consensus       140 aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (245)
                      |||.+.+  ..++.++||||||+++|+|++|..||........     .......                ..+..+++.
T Consensus       190 aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~  251 (310)
T 3s95_A          190 APEMING--RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR----------------YCPPNCPPS  251 (310)
T ss_dssp             CHHHHTT--CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH----------------TCCTTCCTT
T ss_pred             CHHHhcC--CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc----------------cCCCCCCHH
Confidence            9999987  6689999999999999999999999875322110     0011000                011557789


Q ss_pred             HHHHHHHhcCCCCCCCccHHHHhh
Q 037274          215 FWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       215 ~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      +.+++.+||+.||.+|||+.++++
T Consensus       252 l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          252 FFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=9.4e-40  Score=253.01  Aligned_cols=198  Identities=22%  Similarity=0.339  Sum_probs=158.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+++.++||||+++++++.+++..++||||+++++|.+++.                  ...+++..++.+
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~------------------~~~~~~~~~~~i  110 (271)
T 3dtc_A           49 TIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS------------------GKRIPPDILVNW  110 (271)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHT------------------SSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhh------------------cCCCCHHHHHHH
Confidence            45789999999999999999999999999999999999999999977664                  346889999999


Q ss_pred             HHHHHHHHHHHHhCC---cccccCCCCceeccc----------------ccCccccccCC--CCccccccccCceecCCC
Q 037274           90 HKETLKGLSYLQGEG---LFHKNISAGHILHNI----------------FNDDTRNWISS--SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~---ivH~dlkp~nil~~~----------------f~~~~~~~~~~--~~~~~~~y~aPE~~~~~~  148 (245)
                      +.|++.||.|||++|   ++|+||||+||+++.                ||.+.......  ...+++.|+|||.+.+  
T Consensus       111 ~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~--  188 (271)
T 3dtc_A          111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRA--  188 (271)
T ss_dssp             HHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------CCGGGSCHHHHHH--
T ss_pred             HHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCCCccceeCHHHhcc--
Confidence            999999999999999   889999999999862                66554332222  3456999999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      ..++.++||||||+++|+|++|..||.+.+..............     .       ..+..+++.+.+++.+||+.||.
T Consensus       189 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~~~~~~li~~~l~~~p~  256 (271)
T 3dtc_A          189 SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA-----L-------PIPSTCPEPFAKLMEDCWNPDPH  256 (271)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCC-----C-------CCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCC-----C-------CCCcccCHHHHHHHHHHhcCCcc
Confidence            56899999999999999999999999987665554444332211     0       11256789999999999999999


Q ss_pred             CCccHHHHhhc
Q 037274          229 KRPAAEAQVLQ  239 (245)
Q Consensus       229 ~Rpt~~~~l~~  239 (245)
                      +|||+.+++++
T Consensus       257 ~Rps~~e~l~~  267 (271)
T 3dtc_A          257 SRPSFTNILDQ  267 (271)
T ss_dssp             GSCCHHHHHHH
T ss_pred             cCcCHHHHHHH
Confidence            99999999875

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=9.9e-41  Score=269.62  Aligned_cols=215  Identities=13%  Similarity=0.088  Sum_probs=149.8

Q ss_pred             cHHHHHHHHHHHHHHhhC--CCCCeeeEE-------EEEEeC-----------------ceeEEEeeecccCCHHHHHhc
Q 037274            7 QAEEYAKLAREIYRYKHL--SHPNIIPIY-------KTMISQ-----------------RQLFYAEIACMIGSLDSIMTY   60 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l--~h~~Iv~~~-------~~~~~~-----------------~~~~lv~e~~~~~~L~~~~~~   60 (245)
                      .....+.+.+|+.+++.|  +||||++++       +.+..+                 +..++||||++ |+|.+++..
T Consensus       102 ~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~  180 (371)
T 3q60_A          102 SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFST  180 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHH
Confidence            456677888896655555  699988765       454433                 33899999999 799888763


Q ss_pred             CCCCChhhHHHHhhhccCCCCcHHHH------HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccc
Q 037274           61 RPLNSPAATQLIMSNRHRYGITVDCL------AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRN  126 (245)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~  126 (245)
                      .                ...+++...      ..++.||+.||+|||++|++||||||+|||++.        ||++...
T Consensus       181 ~----------------~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~  244 (371)
T 3q60_A          181 L----------------DFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKV  244 (371)
T ss_dssp             H----------------HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEET
T ss_pred             h----------------ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeec
Confidence            1                112344444      677799999999999999999999999999976        8877655


Q ss_pred             ccCC-CCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCC
Q 037274          127 WISS-SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTT  205 (245)
Q Consensus       127 ~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (245)
                      .... ...+++.|+|||.+.++...++.++|||||||++|+|++|+.||.........     .................
T Consensus       245 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~  319 (371)
T 3q60_A          245 GTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG-----SWKRPSLRVPGTDSLAF  319 (371)
T ss_dssp             TCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT-----CCCBCCTTSCCCCSCCC
T ss_pred             CCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccccc-----chhhhhhhhccccccch
Confidence            5443 45568999999999753456899999999999999999999999875432110     00000000000111111


Q ss_pred             CCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          206 HGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       206 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .....+++.+.++|.+||+.||.+|||+.++++||||.
T Consensus       320 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  357 (371)
T 3q60_A          320 GSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL  357 (371)
T ss_dssp             TTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHH
T ss_pred             hhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHH
Confidence            22257889999999999999999999999999999985

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=258.23  Aligned_cols=217  Identities=17%  Similarity=0.283  Sum_probs=167.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEE--------------eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMI--------------SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI   72 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~--------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~   72 (245)
                      ..+..+.+.+|++++++++||||+++++++.              ..+..++|+||++ |+|.+++.             
T Consensus        48 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-------------  113 (320)
T 2i6l_A           48 DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLE-------------  113 (320)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHT-------------
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhh-------------
Confidence            4567788999999999999999999999873              3467899999998 49977664             


Q ss_pred             hhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC-------CCCcccc
Q 037274           73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS-------SSSSITT  136 (245)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~-------~~~~~~~  136 (245)
                           ...+++..++.++.|++.||+|||++|++|+||||+||+++.         ||.+......       ....+++
T Consensus       114 -----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~  188 (320)
T 2i6l_A          114 -----QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK  188 (320)
T ss_dssp             -----TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCC
T ss_pred             -----cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccc
Confidence                 245788999999999999999999999999999999999963         6766543221       1233488


Q ss_pred             ccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------CCC-C
Q 037274          137 WAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------QVA-P  200 (245)
Q Consensus       137 ~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-~  200 (245)
                      .|+|||.+.+ ...++.++||||||+++|+|++|+.||.+.........+..........               ... .
T Consensus       189 ~y~aPE~~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (320)
T 2i6l_A          189 WYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEP  267 (320)
T ss_dssp             TTCCHHHHHC-TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSC
T ss_pred             cccCcHHhcC-cccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCC
Confidence            8999998864 3468999999999999999999999999887766666555443211000               000 0


Q ss_pred             CCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          201 NEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       201 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..........++.++.++|.+||+.||.+|||++++++||||.
T Consensus       268 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  310 (320)
T 2i6l_A          268 HKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS  310 (320)
T ss_dssp             CCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHH
T ss_pred             CCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccc
Confidence            0000011145789999999999999999999999999999985

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=2.2e-39  Score=256.94  Aligned_cols=212  Identities=12%  Similarity=0.211  Sum_probs=169.5

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ...+....+.+|+.++++++||||+++++++.+++..++|||++++|+|.+++....       ...........+++..
T Consensus        67 ~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~~~~~~~~~  139 (322)
T 1p4o_A           67 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR-------PAMANNPVLAPPSLSK  139 (322)
T ss_dssp             SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHH-------HHHHHCTTCCCCCHHH
T ss_pred             cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhc-------hhhccCCCCCCcCHHH
Confidence            345567789999999999999999999999999999999999999999988886310       0011111124578899


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +..++.|++.||.|||++|++|+||||+||+++.        ||.+.......      ...+++.|+|||.+.+  ..+
T Consensus       140 ~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  217 (322)
T 1p4o_A          140 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD--GVF  217 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH--CCC
T ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhcc--CCC
Confidence            9999999999999999999999999999999976        77665433221      2344788999999987  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|+|++ |..||...+.......+.....      .       .....+++.+.+++.+||+.||.+|
T Consensus       218 ~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~l~~li~~~l~~dp~~R  284 (322)
T 1p4o_A          218 TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL------L-------DKPDNCPDMLFELMRMCWQYNPKMR  284 (322)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC------C-------CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCc------C-------CCCCCCCHHHHHHHHHHcCCCcccC
Confidence            999999999999999999 8899988766655554443221      0       0115678999999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      ||+.+++++
T Consensus       285 ps~~e~l~~  293 (322)
T 1p4o_A          285 PSFLEIISS  293 (322)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999876

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=5.3e-40  Score=261.09  Aligned_cols=212  Identities=14%  Similarity=0.221  Sum_probs=170.1

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ........+.+|+.++++++||||+++++++..++..++||||+++++|.+++......          ......+++..
T Consensus        72 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~----------~~~~~~~~~~~  141 (327)
T 2yfx_A           72 CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR----------PSQPSSLAMLD  141 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCC----------SSSTTSCCHHH
T ss_pred             cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhccc----------ccccccccHHH
Confidence            35567778999999999999999999999999999999999999999998888642211          11124588999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCcccccc------CCCCccccccccCceecCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWI------SSSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~------~~~~~~~~~y~aPE~~~~~~  148 (245)
                      ++.++.|++.||.|||+.|++|+||||+||+++.           ||.+.....      .....+++.|+|||.+.+  
T Consensus       142 ~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--  219 (327)
T 2yfx_A          142 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME--  219 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcC--
Confidence            9999999999999999999999999999999973           554432211      112344789999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++||||||+++|+|++ |..||...........+.....      .       .....+++.+.+++.+||+.||
T Consensus       220 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~l~~li~~~l~~dp  286 (327)
T 2yfx_A          220 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR------M-------DPPKNCPGPVYRIMTQCWQHQP  286 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC------C-------CCCTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCC------C-------CCCCCCCHHHHHHHHHHhcCCh
Confidence            568999999999999999998 9999988766655554443321      1       1115678999999999999999


Q ss_pred             CCCccHHHHhhcccc
Q 037274          228 AKRPAAEAQVLQEMW  242 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~f  242 (245)
                      .+|||+.+++++.++
T Consensus       287 ~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          287 EDRPNFAIILERIEY  301 (327)
T ss_dssp             GGSCCHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHH
Confidence            999999999998664

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=7.7e-40  Score=273.27  Aligned_cols=200  Identities=16%  Similarity=0.277  Sum_probs=166.0

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|+.++++++||||+++++++..++..++||||+++|+|.+++..               .....+++..+..
T Consensus       258 ~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~---------------~~~~~~~~~~~~~  322 (495)
T 1opk_A          258 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE---------------CNRQEVSAVVLLY  322 (495)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH---------------SCTTTSCHHHHHH
T ss_pred             cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHh---------------cCcCCCCHHHHHH
Confidence            3567899999999999999999999999999999999999999999777652               2235588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.||+.||+|||++|++||||||+|||++.        ||++.......     ...+++.|+|||.+.+  ..++.++
T Consensus       323 i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~s  400 (495)
T 1opk_A          323 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--NKFSIKS  400 (495)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHH--CEECHHH
T ss_pred             HHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhc--CCCCcHH
Confidence            9999999999999999999999999999975        77766443221     2233678999999987  5689999


Q ss_pred             hHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      ||||||+++|+|++ |..||.+.+.......+....      ...       .+..+++++.++|.+||+.||.+|||+.
T Consensus       401 DvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~  467 (495)
T 1opk_A          401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY------RME-------RPEGCPEKVYELMRACWQWNPSDRPSFA  467 (495)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC------CCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CCC-------CCCCCCHHHHHHHHHHcCcChhHCcCHH
Confidence            99999999999999 999998877666655543322      111       1256789999999999999999999999


Q ss_pred             HHhh
Q 037274          235 AQVL  238 (245)
Q Consensus       235 ~~l~  238 (245)
                      ++++
T Consensus       468 el~~  471 (495)
T 1opk_A          468 EIHQ  471 (495)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-39  Score=253.17  Aligned_cols=203  Identities=18%  Similarity=0.260  Sum_probs=167.0

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ......+.+.+|++++++++||||+++++++ ..+..++|+|++++++|.+++..                ....+++..
T Consensus        49 ~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~  111 (287)
T 1u59_A           49 TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG----------------KREEIPVSN  111 (287)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTT----------------CTTTSCHHH
T ss_pred             cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHh----------------CCccCCHHH
Confidence            3566788899999999999999999999998 55679999999999999777642                134588999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ++.++.|++.||.|||+.|++|+||||+||+++.        ||.+.......       ...+++.|+|||.+.+  ..
T Consensus       112 ~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~  189 (287)
T 1u59_A          112 VAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF--RK  189 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHH--CE
T ss_pred             HHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhcc--CC
Confidence            9999999999999999999999999999999875        77665432221       2334788999999987  56


Q ss_pred             CCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      ++.++||||||+++|+|++ |..||......+....+.....      .       ..+..+++++.+++..||+.||.+
T Consensus       190 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~------~-------~~~~~~~~~l~~li~~~l~~~p~~  256 (287)
T 1u59_A          190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR------M-------ECPPECPPELYALMSDCWIYKWED  256 (287)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCC------C-------CCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCc------C-------CCCCCcCHHHHHHHHHHcCCChhh
Confidence            8999999999999999998 9999988776666555443221      0       111567899999999999999999


Q ss_pred             CccHHHHhhcc
Q 037274          230 RPAAEAQVLQE  240 (245)
Q Consensus       230 Rpt~~~~l~~~  240 (245)
                      ||++.+++++.
T Consensus       257 Rps~~~l~~~l  267 (287)
T 1u59_A          257 RPDFLTVEQRM  267 (287)
T ss_dssp             SCCHHHHHHHH
T ss_pred             CcCHHHHHHHH
Confidence            99999998763

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.9e-39  Score=258.77  Aligned_cols=220  Identities=16%  Similarity=0.160  Sum_probs=167.8

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCC------CeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHP------NIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY   79 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~------~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   79 (245)
                      ......+.+.+|+++++.++|+      +|+++++++...+..++|||++ +++|.+++..               ....
T Consensus        50 ~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~---------------~~~~  113 (339)
T 1z57_A           50 NVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKE---------------NGFL  113 (339)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHH---------------TTTC
T ss_pred             cCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHh---------------cCCC
Confidence            3456678899999999999765      4999999999999999999999 7799766642               2234


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc---------------------------ccCccccccC-CC
Q 037274           80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------------------------FNDDTRNWIS-SS  131 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------------------------f~~~~~~~~~-~~  131 (245)
                      .+++..+..++.|++.||+|||++|++||||||+||+++.                           ||.+...... ..
T Consensus       114 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  193 (339)
T 1z57_A          114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHST  193 (339)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCCS
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcccccc
Confidence            6889999999999999999999999999999999999842                           6665543322 23


Q ss_pred             CccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc----------------
Q 037274          132 SSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS----------------  195 (245)
Q Consensus       132 ~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------  195 (245)
                      ..+|+.|+|||.+.+  ..++.++||||||+++|+|++|..||...+..+....+.........                
T Consensus       194 ~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  271 (339)
T 1z57_A          194 LVSTRHYRAPEVILA--LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDR  271 (339)
T ss_dssp             SCSCGGGCCHHHHTT--SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTE
T ss_pred             ccCCccccChHHhhC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhcc
Confidence            456999999999987  56899999999999999999999999887665544333221110000                


Q ss_pred             CCCC--------------CCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          196 LQVA--------------PNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       196 ~~~~--------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ....              ............++++.+++.+||+.||.+|||++++++||||.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~  333 (339)
T 1z57_A          272 LDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD  333 (339)
T ss_dssp             ECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGG
T ss_pred             ccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHH
Confidence            0000              00000011134467899999999999999999999999999996

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.1e-39  Score=256.01  Aligned_cols=220  Identities=19%  Similarity=0.252  Sum_probs=169.2

Q ss_pred             ccHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhH-HHHhhhccCCCCcH
Q 037274            6 HQAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAAT-QLIMSNRHRYGITV   83 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   83 (245)
                      ......+.+.+|+.+++++ +||||+++++++..++..++|||++++|+|.+++........... ...........+++
T Consensus        65 ~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (313)
T 1t46_A           65 AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL  144 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCH
T ss_pred             hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCH
Confidence            3445678899999999999 899999999999999999999999999999988864322100000 00000112345899


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~  149 (245)
                      ..++.++.|++.||.|||++|++|+||||+||+++.        ||.+.......      ...+++.|+|||.+.+  .
T Consensus       145 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~  222 (313)
T 1t46_A          145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN--C  222 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH--C
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcC--C
Confidence            999999999999999999999999999999999975        77665443322      2334778999999987  5


Q ss_pred             CCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      .++.++||||||+++|+|++ |..||...................            ..+..++.++.+++.+||+.||.
T Consensus       223 ~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~li~~~l~~dp~  290 (313)
T 1t46_A          223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM------------LSPEHAPAEMYDIMKTCWDADPL  290 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCC------------CCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCC------------CCcccCCHHHHHHHHHHcCCCch
Confidence            68999999999999999998 999998876555544444332111            11155789999999999999999


Q ss_pred             CCccHHHHhhc
Q 037274          229 KRPAAEAQVLQ  239 (245)
Q Consensus       229 ~Rpt~~~~l~~  239 (245)
                      +|||+.+++++
T Consensus       291 ~Rps~~ell~~  301 (313)
T 1t46_A          291 KRPTFKQIVQL  301 (313)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.6e-39  Score=251.12  Aligned_cols=199  Identities=21%  Similarity=0.343  Sum_probs=164.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+++..++++|++++++|.+++..                ....+++..+..+
T Consensus        46 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~  109 (267)
T 3t9t_A           46 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT----------------QRGLFAAETLLGM  109 (267)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHH----------------TTTCCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhh----------------CcccCCHHHHHHH
Confidence            346799999999999999999999999999999999999999999777752                1245889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-----CCCCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-----SSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||.|||+.|++|+||||+||+++.        ||.+.....     .....+++.|+|||.+.+  ..++.++|
T Consensus       110 ~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  187 (267)
T 3t9t_A          110 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--SRYSSKSD  187 (267)
T ss_dssp             HHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHH--CCCCHHHH
T ss_pred             HHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcC--CCccchhc
Confidence            999999999999999999999999999976        665543321     113344778999999987  56899999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||+++|+|++ |..||...........+.....      ..       .+...++.+.+++.+||+.||.+|||+.+
T Consensus       188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~------~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~  254 (267)
T 3t9t_A          188 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR------LY-------KPRLASTHVYQIMNHCWRERPEDRPAFSR  254 (267)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC------CC-------CCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc------CC-------CCccCcHHHHHHHHHHccCChhhCcCHHH
Confidence            9999999999999 8999988776665555443321      11       11457889999999999999999999999


Q ss_pred             Hhhc
Q 037274          236 QVLQ  239 (245)
Q Consensus       236 ~l~~  239 (245)
                      ++++
T Consensus       255 ll~~  258 (267)
T 3t9t_A          255 LLRQ  258 (267)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.2e-39  Score=269.30  Aligned_cols=200  Identities=20%  Similarity=0.325  Sum_probs=163.6

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc-eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQR-QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ...+.+.+|+.++++++||||+++++++...+ ..++||||+++|+|.+++..               .....+++..+.
T Consensus       228 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~---------------~~~~~~~~~~~~  292 (450)
T 1k9a_A          228 ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---------------RGRSVLGGDCLL  292 (450)
T ss_dssp             TTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHH---------------HCTTTCCHHHHH
T ss_pred             hHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHh---------------cCCCCCCHHHHH
Confidence            35678999999999999999999999987655 79999999999999777752               123347889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCchhhHH
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .++.|++.||+|||++|++||||||+|||++.        ||++....... ...+++.|+|||.+.+  ..++.++|||
T Consensus       293 ~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~sDvw  370 (450)
T 1k9a_A          293 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE--KKFSTKSDVW  370 (450)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHS--SCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcC--CCCCcHHHHH
Confidence            99999999999999999999999999999975        77765433222 2345789999999987  6699999999


Q ss_pred             HHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          159 LIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       159 slG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      |||+++|+|++ |..||......+....+....      ...       .+..+++++.++|.+||+.||.+|||+.+++
T Consensus       371 slG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~------~~~-------~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~  437 (450)
T 1k9a_A          371 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY------KMD-------APDGCPPAVYDVMKNCWHLDAATRPTFLQLR  437 (450)
T ss_dssp             HHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTC------CCC-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CCC-------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            99999999998 999998877666665554332      111       1256889999999999999999999999987


Q ss_pred             h
Q 037274          238 L  238 (245)
Q Consensus       238 ~  238 (245)
                      +
T Consensus       438 ~  438 (450)
T 1k9a_A          438 E  438 (450)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.6e-39  Score=253.82  Aligned_cols=203  Identities=15%  Similarity=0.270  Sum_probs=167.3

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ......+.+.+|++++++++||||+++++++.+++..++|||++++++|.+++..               .....+++..
T Consensus        48 ~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~---------------~~~~~~~~~~  112 (288)
T 3kfa_A           48 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE---------------CNRQEVSAVV  112 (288)
T ss_dssp             SCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHH---------------CCTTTSCHHH
T ss_pred             cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHh---------------cccCCccHhH
Confidence            3445678899999999999999999999999999999999999999999776642               2245688999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ++.++.|++.||.|||+.|++|+||||+||+++.        ||.+.......     ...+++.|+|||.+.+  ..++
T Consensus       113 ~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~  190 (288)
T 3kfa_A          113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--NKFS  190 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHH--CCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhcc--CCCC
Confidence            9999999999999999999999999999999976        66655433222     2233678999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|+|++ |..||...+.......+.....      ..       .+..+++.+.+++..||..||.+||
T Consensus       191 ~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~l~~li~~~l~~dp~~Rp  257 (288)
T 3kfa_A          191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------ME-------RPEGCPEKVYELMRACWQWNPSDRP  257 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC------CC-------CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCC------CC-------CCCCCCHHHHHHHHHHhCCChhhCc
Confidence            99999999999999999 9999988776666555443321      11       1156789999999999999999999


Q ss_pred             cHHHHhh
Q 037274          232 AAEAQVL  238 (245)
Q Consensus       232 t~~~~l~  238 (245)
                      |++++++
T Consensus       258 s~~~~~~  264 (288)
T 3kfa_A          258 SFAEIHQ  264 (288)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999876

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=2.3e-39  Score=259.99  Aligned_cols=216  Identities=21%  Similarity=0.299  Sum_probs=164.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCce------eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ------LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      .....+.+.+|+.++++++||||+++++++...+.      .+++||++++ +|.+++.                   ..
T Consensus        63 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-------------------~~  122 (353)
T 3coi_A           63 SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMG-------------------LK  122 (353)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTTT-------------------SC
T ss_pred             chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEeccccC-CHHHHhc-------------------CC
Confidence            34567789999999999999999999999977654      4999999984 8844332                   34


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +++..+..++.|++.||.|||++|++|+||||+||+++.        ||.+....... ...+|+.|+|||.+.+ ...+
T Consensus       123 ~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~  201 (353)
T 3coi_A          123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILS-WMHY  201 (353)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBCCSCHHHHSC-CSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhC-cCCC
Confidence            889999999999999999999999999999999999976        67665443222 3456999999999874 3468


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc-----------------CCCCCCCCCCCCcccccHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS-----------------LQVAPNEDTTHGTRTLSKN  214 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~  214 (245)
                      +.++||||||+++|+|++|..||.+.+..+....+.........                 ................+++
T Consensus       202 ~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (353)
T 3coi_A          202 NQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQ  281 (353)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHH
Confidence            89999999999999999999999987766655544332111000                 0000000011112467899


Q ss_pred             HHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          215 FWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       215 ~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.++|.+||..||.+|||++++++||||.
T Consensus       282 ~~~li~~~L~~dp~~Rpt~~e~l~hp~f~  310 (353)
T 3coi_A          282 AADLLEKMLELDVDKRLTAAQALTHPFFE  310 (353)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhcCcchh
Confidence            99999999999999999999999999995

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=1.3e-39  Score=258.84  Aligned_cols=200  Identities=16%  Similarity=0.264  Sum_probs=162.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+.++++++||||+++++++..++ .+++++++.+|+|.+++..                ....+++..++
T Consensus        58 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~----------------~~~~~~~~~~~  120 (327)
T 3poz_A           58 PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVRE----------------HKDNIGSQYLL  120 (327)
T ss_dssp             --CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHH----------------STTSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHh----------------cCCCCCHHHHH
Confidence            345678999999999999999999999997654 7899999999999776652                13468899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||.|||+.|++||||||+||+++.        ||++.......      ...+|+.|+|||.+.+  ..++.
T Consensus       121 ~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~  198 (327)
T 3poz_A          121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--RIYTH  198 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHH--CCCCH
T ss_pred             HHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhcc--CCCCc
Confidence            99999999999999999999999999999876        77665433222      2334778999999987  66899


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|+|++ |..||.+.........+....      ..+       .+..++.++.+++.+||+.||.+|||
T Consensus       199 ~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps  265 (327)
T 3poz_A          199 QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE------RLP-------QPPICTIDVYMIMVKCWMIDADSRPK  265 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC------CCC-------CCTTBCHHHHHHHHHHTCSCGGGSCC
T ss_pred             hhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCC------CCC-------CCccCCHHHHHHHHHHcCCChhhCCC
Confidence            9999999999999999 999998877666554443322      111       11557889999999999999999999


Q ss_pred             HHHHhhc
Q 037274          233 AEAQVLQ  239 (245)
Q Consensus       233 ~~~~l~~  239 (245)
                      +.+++++
T Consensus       266 ~~ell~~  272 (327)
T 3poz_A          266 FRELIIE  272 (327)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999865

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.3e-39  Score=256.42  Aligned_cols=202  Identities=18%  Similarity=0.256  Sum_probs=163.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+....+.+|+.++++++||||+++++++...+..++|||++++++|.+++..                ....+++..+
T Consensus        86 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~  149 (333)
T 1mqb_A           86 TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE----------------KDGEFSVLQL  149 (333)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHH----------------TTTCSCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHh----------------CCCCCCHHHH
Confidence            456677899999999999999999999999999999999999999999777652                1346889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +.++.|++.||.|||+.|++|+||||+||+++.        ||.+.......       ...+++.|+|||.+.+  ..+
T Consensus       150 ~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  227 (333)
T 1mqb_A          150 VGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY--RKF  227 (333)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHS--CCC
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhccc--CCC
Confidence            999999999999999999999999999999976        66665433221       1223678999999987  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|+|++ |..||......+....+....      ..+.       +..+++.+.+++.+||+.||.+|
T Consensus       228 ~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~l~~li~~~l~~~p~~R  294 (333)
T 1mqb_A          228 TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF------RLPT-------PMDCPSAIYQLMMQCWQQERARR  294 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC------CCCC-------CTTCBHHHHHHHHHHTCSSTTTS
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCC------cCCC-------cccCCHHHHHHHHHHcCCChhhC
Confidence            999999999999999998 999998877666655544322      1111       14678999999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      |++.+++++
T Consensus       295 ps~~~l~~~  303 (333)
T 1mqb_A          295 PKFADIVSI  303 (333)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=4.2e-40  Score=257.24  Aligned_cols=201  Identities=16%  Similarity=0.189  Sum_probs=157.5

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.++++++||||+++++++.+++..++||||+++|+|.+++..                ....+++..+.
T Consensus        53 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~  116 (289)
T 4fvq_A           53 RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK----------------NKNCINILWKL  116 (289)
T ss_dssp             GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHH----------------TGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHh----------------CCCCCCHHHHH
Confidence            34567899999999999999999999999999999999999999999887753                12347889999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc----------------ccCccccccCCCCccccccccCceecCCCCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      .++.|++.||.|||++|++||||||+||+++.                ||.+..........+++.|+|||.+.+ ...+
T Consensus       117 ~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~  195 (289)
T 4fvq_A          117 EVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN-PKNL  195 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHC-GGGC
T ss_pred             HHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCccccCCcCcccCHHHhCC-CCCC
Confidence            99999999999999999999999999999864                444433322223345889999999874 3458


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++||||||+++|+|++|..|+.................     ..         +...++++.+++.+||+.||.+||
T Consensus       196 ~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~-----~~---------~~~~~~~l~~li~~~l~~dp~~Rp  261 (289)
T 4fvq_A          196 NLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH-----QL---------PAPKAAELANLINNCMDYEPDHRP  261 (289)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-----CC---------CCCSSCTTHHHHHHHSCSSGGGSC
T ss_pred             CchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccC-----CC---------CCCCCHHHHHHHHHHcCCChhHCc
Confidence            9999999999999999996554444333333222222210     11         134567899999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |+.+++++
T Consensus       262 s~~~ll~~  269 (289)
T 4fvq_A          262 SFRAIIRD  269 (289)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=3.5e-39  Score=251.12  Aligned_cols=201  Identities=17%  Similarity=0.291  Sum_probs=163.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.++++++||||+++++++.. +..++|+|++++++|.+++..                ....+++..+
T Consensus        53 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~----------------~~~~~~~~~~  115 (281)
T 3cc6_A           53 TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLER----------------NKNSLKVLTL  115 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHH----------------HTTTCCHHHH
T ss_pred             CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHHh----------------ccccCCHHHH
Confidence            45677889999999999999999999998764 457999999999999777752                1345889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ..++.|++.||.|||++|++|+||||+||+++.        ||.+.......     ...+++.|+|||.+.+  ..++.
T Consensus       116 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  193 (281)
T 3cc6_A          116 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF--RRFTT  193 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHH--CCCCH
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhcc--CCCCc
Confidence            999999999999999999999999999999975        66665433221     2334778999999987  56899


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|+|++ |+.||...........+.....      .+.       +..+++.+.+++.+||..||.+|||
T Consensus       194 ~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~l~~li~~~l~~~p~~Rps  260 (281)
T 3cc6_A          194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR------LPK-------PDLCPPVLYTLMTRCWDYDPSDRPR  260 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCC------CCC-------CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCC------CCC-------CCCCCHHHHHHHHHHccCCchhCcC
Confidence            9999999999999998 9999987766666555443321      111       1457899999999999999999999


Q ss_pred             HHHHhhc
Q 037274          233 AEAQVLQ  239 (245)
Q Consensus       233 ~~~~l~~  239 (245)
                      +.+++++
T Consensus       261 ~~ell~~  267 (281)
T 3cc6_A          261 FTELVCS  267 (281)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-39  Score=260.16  Aligned_cols=219  Identities=19%  Similarity=0.221  Sum_probs=166.1

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHH------HHhhhccCC
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQ------LIMSNRHRY   79 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~------~~~~~~~~~   79 (245)
                      .....+.+.+|+.+++++ +||||+++++++...+..++||||+++|+|.+++............      .........
T Consensus        88 ~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (344)
T 1rjb_A           88 DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN  167 (344)
T ss_dssp             ----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC--------------------
T ss_pred             CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccc
Confidence            345667899999999999 8999999999999999999999999999999988754322111000      000011124


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceec
Q 037274           80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVN  145 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~  145 (245)
                      .+++..++.++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ...+|+.|+|||.+.
T Consensus       168 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  247 (344)
T 1rjb_A          168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF  247 (344)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc
Confidence            5889999999999999999999999999999999999975        77765443322      233477899999998


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcC
Q 037274          146 FGDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       146 ~~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      +  ..++.++||||||+++|+|++ |..||.+................     ..       .+..+++++.+++.+||+
T Consensus       248 ~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~l~~li~~~l~  313 (344)
T 1rjb_A          248 E--GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFK-----MD-------QPFYATEEIYIIMQSCWA  313 (344)
T ss_dssp             H--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCC-----CC-------CCTTCCHHHHHHHHHHTC
T ss_pred             c--CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCC-----CC-------CCCCCCHHHHHHHHHHcC
Confidence            7  568999999999999999998 99999887655554444433211     11       114578999999999999


Q ss_pred             CCCCCCccHHHHhhc
Q 037274          225 PDPAKRPAAEAQVLQ  239 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~  239 (245)
                      .||.+|||+.+++++
T Consensus       314 ~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          314 FDSRKRPSFPNLTSF  328 (344)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CCchhCcCHHHHHHH
Confidence            999999999999876

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=2.3e-39  Score=259.96  Aligned_cols=220  Identities=14%  Similarity=0.124  Sum_probs=165.8

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCC------eeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPN------IIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY   79 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~------Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   79 (245)
                      ......+.+.+|+.++++++|++      ++.+++++...+..++|||++. +++.+++.               .....
T Consensus        55 ~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~---------------~~~~~  118 (355)
T 2eu9_A           55 NVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLG-KNTFEFLK---------------ENNFQ  118 (355)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECCC-CBHHHHHH---------------HTTTC
T ss_pred             ccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEeccC-CChHHHHH---------------hccCC
Confidence            34566788999999999997665      8999999999999999999995 56644443               12234


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceecc-------------------c--------ccCccccccC-CC
Q 037274           80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-------------------I--------FNDDTRNWIS-SS  131 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~-------------------~--------f~~~~~~~~~-~~  131 (245)
                      .+++..+..++.||+.||.|||++|++|+||||+||+++                   .        ||.+...... ..
T Consensus       119 ~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  198 (355)
T 2eu9_A          119 PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTT  198 (355)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccccC
Confidence            688999999999999999999999999999999999992                   1        7776544332 24


Q ss_pred             CccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc----------------
Q 037274          132 SSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS----------------  195 (245)
Q Consensus       132 ~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------  195 (245)
                      ..+|+.|+|||.+.+  ..++.++||||||+++|+|++|..||...+.......+.........                
T Consensus       199 ~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  276 (355)
T 2eu9_A          199 IVATRHYRPPEVILE--LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGG  276 (355)
T ss_dssp             SCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTE
T ss_pred             CcCCCcccCCeeeec--CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccc
Confidence            467999999999987  56899999999999999999999999987665544333222110000                


Q ss_pred             --CCC------------CCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          196 --LQV------------APNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       196 --~~~------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                        ...            .............+.++.++|.+||+.||.+|||+.++++||||.
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~  338 (355)
T 2eu9_A          277 LVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA  338 (355)
T ss_dssp             ECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGG
T ss_pred             cccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence              000            000000011123456899999999999999999999999999996

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=5.1e-40  Score=261.06  Aligned_cols=214  Identities=15%  Similarity=0.159  Sum_probs=164.5

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ...+.+|+.++++++||||+++++++.+++..++|+||+++|+|.+++....             .....+++..+..++
T Consensus        71 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~~i~  137 (326)
T 3uim_A           71 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-------------ESQPPLDWPKRQRIA  137 (326)
T ss_dssp             CCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCS-------------TTCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhcc-------------ccCCCCCHHHHHHHH
Confidence            3468999999999999999999999999999999999999999988776321             123458999999999


Q ss_pred             HHHHHHHHHHHhC---CcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCch
Q 037274           91 KETLKGLSYLQGE---GLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        91 ~qi~~~l~~lh~~---~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .|++.||.|||+.   |++|+||||+||+++.        ||.+.......     ...+|+.|+|||.+.+  ..++.+
T Consensus       138 ~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  215 (326)
T 3uim_A          138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST--GKSSEK  215 (326)
T ss_dssp             HHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHH--SEECHH
T ss_pred             HHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhcc--CCCCcc
Confidence            9999999999999   9999999999999986        77765433221     3347999999999987  558999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCC-----CCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          155 SDIWLIGITALQFPCGGLPVSR-----RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      +||||||+++|+|++|..||..     ...................................+..+.+++..||+.||.+
T Consensus       216 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  295 (326)
T 3uim_A          216 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPME  295 (326)
T ss_dssp             HHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGG
T ss_pred             ccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCcc
Confidence            9999999999999999999962     11112222222222111111111222222233556688999999999999999


Q ss_pred             CccHHHHhhc
Q 037274          230 RPAAEAQVLQ  239 (245)
Q Consensus       230 Rpt~~~~l~~  239 (245)
                      |||+.+++++
T Consensus       296 Rps~~ell~~  305 (326)
T 3uim_A          296 RPKMSEVVRM  305 (326)
T ss_dssp             SCCHHHHHHH
T ss_pred             CCCHHHHHHH
Confidence            9999999987

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=5.7e-40  Score=271.57  Aligned_cols=199  Identities=17%  Similarity=0.289  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++||||+++++++. .+..++||||+.+|+|.+++..               .....+++..+..
T Consensus       225 ~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~---------------~~~~~~~~~~~~~  288 (454)
T 1qcf_A          225 MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKS---------------DEGSKQPLPKLID  288 (454)
T ss_dssp             BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHS---------------HHHHTCCHHHHHH
T ss_pred             ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHh---------------ccCCCCCHHHHHH
Confidence            35678999999999999999999999875 6679999999999999887752               1123578889999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----CCCccccccccCceecCCCCCCCchh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      ++.||+.||+|||++|++||||||+|||++.        ||++......     ....+++.|+|||.+..  ..++.++
T Consensus       289 ~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~  366 (454)
T 1qcf_A          289 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF--GSFTIKS  366 (454)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHH--CCCCHHH
T ss_pred             HHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhcc--CCCCcHH
Confidence            9999999999999999999999999999986        7777644321     12334678999999987  5689999


Q ss_pred             hHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      ||||||+++|+|++ |..||.+.+..+....+....      ..+.       +..+++++.+++.+||+.||.+|||++
T Consensus       367 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~------~~~~-------~~~~~~~l~~li~~cl~~dp~~RPt~~  433 (454)
T 1qcf_A          367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY------RMPR-------PENCPEELYNIMMRCWKNRPEERPTFE  433 (454)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC------CCCC-------CTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CCCC-------CCCCCHHHHHHHHHHccCChhHCcCHH
Confidence            99999999999999 999999877766666554432      1111       156789999999999999999999999


Q ss_pred             HHhh
Q 037274          235 AQVL  238 (245)
Q Consensus       235 ~~l~  238 (245)
                      +++.
T Consensus       434 ~i~~  437 (454)
T 1qcf_A          434 YIQS  437 (454)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.1e-39  Score=264.35  Aligned_cols=220  Identities=15%  Similarity=0.178  Sum_probs=167.5

Q ss_pred             ccHHHHHHHHHHHHHHhhCC-CC-----CeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCC
Q 037274            6 HQAEEYAKLAREIYRYKHLS-HP-----NIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY   79 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~-h~-----~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   79 (245)
                      ......+.+..|+.+++.++ |+     +|+++++++...+..++|||++++ +|.+++..               ....
T Consensus        89 ~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~---------------~~~~  152 (382)
T 2vx3_A           89 NKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRN---------------TNFR  152 (382)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHH---------------TTTS
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhh---------------cCcC
Confidence            34556778889999999885 44     499999999999999999999975 99776652               1224


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHH--hCCcccccCCCCceeccc----------ccCccccccC-CCCccccccccCceecC
Q 037274           80 GITVDCLAIAHKETLKGLSYLQ--GEGLFHKNISAGHILHNI----------FNDDTRNWIS-SSSSITTWAAAPEVVNF  146 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh--~~~ivH~dlkp~nil~~~----------f~~~~~~~~~-~~~~~~~~y~aPE~~~~  146 (245)
                      .+++..+..++.|++.||.|||  +.||+||||||+|||++.          ||++...... ....+|+.|+|||.+.+
T Consensus       153 ~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~  232 (382)
T 2vx3_A          153 GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLG  232 (382)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccccccccCCccccChHHHcC
Confidence            5889999999999999999999  579999999999999942          7777654332 24567999999999987


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC-------------CCCCC------------
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL-------------QVAPN------------  201 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~------------  201 (245)
                        ..++.++|||||||++|+|++|+.||.+.+..+....+..........             ..+..            
T Consensus       233 --~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (382)
T 2vx3_A          233 --MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKR  310 (382)
T ss_dssp             --CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCC
T ss_pred             --CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccccccccccccccc
Confidence              568999999999999999999999999887777666655432111000             00000            


Q ss_pred             CCCCCC-------------------------cccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          202 EDTTHG-------------------------TRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       202 ~~~~~~-------------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ......                         ....++++.+||.+||+.||.+|||++++++||||.
T Consensus       311 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~  377 (382)
T 2vx3_A          311 EYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK  377 (382)
T ss_dssp             CSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGC
T ss_pred             ccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccc
Confidence            000000                         001124789999999999999999999999999995

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.1e-39  Score=258.68  Aligned_cols=218  Identities=13%  Similarity=0.154  Sum_probs=165.6

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+.++++++||||+++++++..++..++|+||+++|+|.+++....             .....+++..++
T Consensus        76 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~  142 (321)
T 2qkw_B           76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD-------------LPTMSMSWEQRL  142 (321)
T ss_dssp             SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSC-------------CCSCCCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccC-------------CCccccCHHHHH
Confidence            3467789999999999999999999999999999999999999999977665311             112458899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||.|||++|++|+||||+||+++.        ||.+......      ....+|+.|+|||.+.+  ..++.
T Consensus       143 ~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~  220 (321)
T 2qkw_B          143 EICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIK--GRLTE  220 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHH--CBCCT
T ss_pred             HHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcC--CCCCc
Confidence            99999999999999999999999999999976        7766543221      12346899999999987  56899


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHH---HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDI---MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      ++||||||+++|+|++|+.||........   ..................+..........+..+.+++.+||+.||++|
T Consensus       221 ~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  300 (321)
T 2qkw_B          221 KSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDR  300 (321)
T ss_dssp             HHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGS
T ss_pred             ccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccC
Confidence            99999999999999999999976443221   111111110111111111111222235567889999999999999999


Q ss_pred             ccHHHHhhcc
Q 037274          231 PAAEAQVLQE  240 (245)
Q Consensus       231 pt~~~~l~~~  240 (245)
                      ||+.+++++-
T Consensus       301 ps~~ell~~L  310 (321)
T 2qkw_B          301 PSMGDVLWKL  310 (321)
T ss_dssp             CCHHHHHHHH
T ss_pred             cCHHHHHHHH
Confidence            9999998763

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.5e-39  Score=267.53  Aligned_cols=213  Identities=17%  Similarity=0.181  Sum_probs=155.8

Q ss_pred             HHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           11 YAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        11 ~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      .+.+.+|+.+++++ +||||+++++++.+++..++|||++. |+|.+++........          .....++..++.+
T Consensus        52 ~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~----------~~~~~~~~~~~~i  120 (434)
T 2rio_A           52 CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDE----------NLKLQKEYNPISL  120 (434)
T ss_dssp             HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC----------------------CCHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCch----------hhhhccchhHHHH
Confidence            45678999999876 89999999999999999999999997 599888864321100          0011234456789


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceecc---------------------cccCccccccCC--------CCcccccccc
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHN---------------------IFNDDTRNWISS--------SSSITTWAAA  140 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~---------------------~f~~~~~~~~~~--------~~~~~~~y~a  140 (245)
                      +.||+.||.|||++|++||||||+||+++                     +||++.......        ...+|+.|+|
T Consensus       121 ~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~a  200 (434)
T 2rio_A          121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRA  200 (434)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSC
T ss_pred             HHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccC
Confidence            99999999999999999999999999984                     177765443321        2357999999


Q ss_pred             CceecCC-----CCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHH
Q 037274          141 PEVVNFG-----DDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKN  214 (245)
Q Consensus       141 PE~~~~~-----~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (245)
                      ||.+.+.     ...++.++|||||||++|+|++ |..||.......  ..+........     .  ........++++
T Consensus       201 PE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~-----~--~~~~~~~~~~~~  271 (434)
T 2rio_A          201 PELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLD-----E--MKCLHDRSLIAE  271 (434)
T ss_dssp             HHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCC-----C--CTTCCCHHHHHH
T ss_pred             HHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcc-----c--ccccccccchHH
Confidence            9998751     2568899999999999999999 899997654332  22222211110     0  011112456789


Q ss_pred             HHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          215 FWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       215 ~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.++|.+||+.||.+|||+.++++||||+
T Consensus       272 ~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          272 ATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             HHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence            99999999999999999999999999995

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=7.8e-40  Score=260.98  Aligned_cols=202  Identities=17%  Similarity=0.223  Sum_probs=136.0

Q ss_pred             HHHhhCCCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHH
Q 037274           19 YRYKHLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETL   94 (245)
Q Consensus        19 ~~l~~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~   94 (245)
                      ..++.++||||+++++++..    ++..++||||+++|+|.+++..               .....+++..++.++.|++
T Consensus        74 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~---------------~~~~~l~~~~~~~i~~ql~  138 (336)
T 3fhr_A           74 HHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQE---------------RGDQAFTEREAAEIMRDIG  138 (336)
T ss_dssp             HHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHT---------------C-CCCCBHHHHHHHHHHHH
T ss_pred             HHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHh---------------cCCCCCCHHHHHHHHHHHH
Confidence            34677799999999999876    4458999999999999776652               2235689999999999999


Q ss_pred             HHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC--CCCccccccccCceecCCCCCCCchhhHHHHH
Q 037274           95 KGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIG  161 (245)
Q Consensus        95 ~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG  161 (245)
                      .||.|||++|++|+||||+||+++.           ||.+......  ....+|+.|+|||.+.+  ..++.++||||||
T Consensus       139 ~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG  216 (336)
T 3fhr_A          139 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGP--EKYDKSCDMWSLG  216 (336)
T ss_dssp             HHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------------------------CHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCccChhhhCC--CCCCchhhHHHHH
Confidence            9999999999999999999999963           6665433322  23456999999999976  5688999999999


Q ss_pred             HHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccc
Q 037274          162 ITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEM  241 (245)
Q Consensus       162 ~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~  241 (245)
                      +++|+|++|..||...................      ...........+++++.+++.+||+.||.+|||++++++|||
T Consensus       217 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  290 (336)
T 3fhr_A          217 VIMYILLCGFPPFYSNTGQAISPGMKRRIRLG------QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW  290 (336)
T ss_dssp             HHHHHHHHSSCCC---------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred             HHHHHHHHCCCCCCCccchhhhhhHHHhhhcc------ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence            99999999999998755433322111111100      000011112567899999999999999999999999999999


Q ss_pred             cc
Q 037274          242 WH  243 (245)
Q Consensus       242 f~  243 (245)
                      |.
T Consensus       291 ~~  292 (336)
T 3fhr_A          291 IN  292 (336)
T ss_dssp             HH
T ss_pred             cc
Confidence            85

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=2.9e-39  Score=257.41  Aligned_cols=216  Identities=19%  Similarity=0.233  Sum_probs=167.3

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+..+.+.+|+.+++++ +||||+++++++..++..++||||+++|+|.+++.........   ..........+++..
T Consensus        89 ~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~---~~~~~~~~~~~~~~~  165 (333)
T 2i1m_A           89 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET---DPAFAIANSTASTRD  165 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSC---C-------CCCCHHH
T ss_pred             ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccc---cccccccccccCHHH
Confidence            456778899999999999 8999999999999999999999999999998888631100000   000000134578999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ++.++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ...+++.|+|||.+.+  ..+
T Consensus       166 ~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  243 (333)
T 2i1m_A          166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD--CVY  243 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHH--CCC
T ss_pred             HHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhcc--CCC
Confidence            9999999999999999999999999999999975        77765443222      2334778999999987  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|+|++ |..||.+.................     .       .+...++.+.+++..||+.||.+|
T Consensus       244 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~~l~~li~~~l~~~p~~R  311 (333)
T 2i1m_A          244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM-----A-------QPAFAPKNIYSIMQACWALEPTHR  311 (333)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCC-----C-------CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCC-----C-------CCCCCCHHHHHHHHHHhccChhhC
Confidence            999999999999999998 999998866555544444332111     1       114468899999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      ||+.+++++
T Consensus       312 ps~~~l~~~  320 (333)
T 2i1m_A          312 PTFQQICSF  320 (333)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2.2e-39  Score=257.48  Aligned_cols=217  Identities=18%  Similarity=0.307  Sum_probs=165.6

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+..+.+.+|+.+++++ +||||+++++++.+++..++|||++++++|.+++.......... ...........+++..
T Consensus        65 ~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~  143 (327)
T 1fvr_A           65 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP-AFAIANSTASTLSSQQ  143 (327)
T ss_dssp             -----CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCH-HHHHHTTBSCSSCHHH
T ss_pred             chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccc-cccccccccccCCHHH
Confidence            345667899999999999 89999999999999999999999999999998886432100000 0011112345789999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ++.++.|++.||.|||++|++|+||||+||+++.        ||.+......   ....+++.|+|||.+.+  ..++.+
T Consensus       144 ~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  221 (327)
T 1fvr_A          144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY--SVYTTN  221 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHH--CEECHH
T ss_pred             HHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhcc--ccCCch
Confidence            9999999999999999999999999999999976        6665432221   12334788999999987  568999


Q ss_pred             hhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +||||||+++|+|++ |..||.+.+.......+....      ..       ..+..+++++.+++.+||..||.+|||+
T Consensus       222 ~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~  288 (327)
T 1fvr_A          222 SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY------RL-------EKPLNCDDEVYDLMRQCWREKPYERPSF  288 (327)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC------CC-------CCCTTBCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCC------CC-------CCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            999999999999998 999998876655544433221      11       1115678999999999999999999999


Q ss_pred             HHHhhc
Q 037274          234 EAQVLQ  239 (245)
Q Consensus       234 ~~~l~~  239 (245)
                      ++++++
T Consensus       289 ~ell~~  294 (327)
T 1fvr_A          289 AQILVS  294 (327)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=4.4e-39  Score=256.51  Aligned_cols=218  Identities=17%  Similarity=0.249  Sum_probs=169.3

Q ss_pred             ccHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            6 HQAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ...+..+.+.+|+.+++++ +||||+++++++..++..++|+||+++|+|.+++............. ........+++.
T Consensus        79 ~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~  157 (334)
T 2pvf_A           79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK  157 (334)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC---------CCCHH
T ss_pred             CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhcccccccccc-ccccccccCCHH
Confidence            3556778899999999999 89999999999999999999999999999999887432211000000 001112458899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~  150 (245)
                      .++.++.|++.||.|||+.|++|+||||+||+++.        ||.+......      ....+++.|+|||.+.+  ..
T Consensus       158 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~  235 (334)
T 2pvf_A          158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD--RV  235 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHH--CE
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcC--CC
Confidence            99999999999999999999999999999999975        7766543322      12344788999999987  56


Q ss_pred             CCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      ++.++||||||+++|+|++ |..||.+.........+.....      ..       .+..++.++.+++.+||+.||.+
T Consensus       236 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~l~~li~~~l~~dp~~  302 (334)
T 2pvf_A          236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR------MD-------KPANCTNELYMMMRDCWHAVPSQ  302 (334)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC------CC-------CCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCC------CC-------CCccCCHHHHHHHHHHccCChhh
Confidence            8999999999999999999 9999988766655554443321      11       11557899999999999999999


Q ss_pred             CccHHHHhhc
Q 037274          230 RPAAEAQVLQ  239 (245)
Q Consensus       230 Rpt~~~~l~~  239 (245)
                      |||+.+++++
T Consensus       303 Rps~~ell~~  312 (334)
T 2pvf_A          303 RPTFKQLVED  312 (334)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999864

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.2e-39  Score=265.04  Aligned_cols=203  Identities=19%  Similarity=0.224  Sum_probs=153.9

Q ss_pred             HHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           13 KLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        13 ~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      .+.+|+++++++ +||||+++++++.+.+..++|||++.+ +|.+++...                .....+..+..++.
T Consensus        63 ~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~----------------~~~~~~~~~~~i~~  125 (432)
T 3p23_A           63 FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQK----------------DFAHLGLEPITLLQ  125 (432)
T ss_dssp             ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHSS----------------SCCCCSSCHHHHHH
T ss_pred             HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCC-CHHHHHHhc----------------CCCccchhHHHHHH
Confidence            467899999999 799999999999999999999999975 997777532                22344456678999


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceecc-------------cccCccccccC-------CCCccccccccCceecCC-CCC
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHN-------------IFNDDTRNWIS-------SSSSITTWAAAPEVVNFG-DDY  150 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~-------------~f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~  150 (245)
                      ||+.||.|||+.||+||||||+||+++             +||++......       ....+|+.|+|||.+.+. ...
T Consensus       126 qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~  205 (432)
T 3p23_A          126 QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKEN  205 (432)
T ss_dssp             HHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---C
T ss_pred             HHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccC
Confidence            999999999999999999999999984             17766544322       234579999999999742 245


Q ss_pred             CCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      ++.++|||||||++|+|++ |..||........ .......    ...      ........+..+.++|.+||+.||.+
T Consensus       206 ~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-~~~~~~~----~~~------~~~~~~~~~~~~~~li~~~L~~dP~~  274 (432)
T 3p23_A          206 PTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-NILLGAC----SLD------CLHPEKHEDVIARELIEKMIAMDPQK  274 (432)
T ss_dssp             CCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-HHHTTCC----CCT------TSCTTCHHHHHHHHHHHHHSCSSGGG
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-HHHhccC----Ccc------ccCccccccHHHHHHHHHHHhCCHhh
Confidence            6789999999999999999 8889866443322 2111111    000      00111345667899999999999999


Q ss_pred             CccHHHHhhccccc
Q 037274          230 RPAAEAQVLQEMWH  243 (245)
Q Consensus       230 Rpt~~~~l~~~~f~  243 (245)
                      |||++++++||||+
T Consensus       275 Rps~~evl~hp~f~  288 (432)
T 3p23_A          275 RPSAKHVLKHPFFW  288 (432)
T ss_dssp             SCCHHHHHTSTTTC
T ss_pred             CCCHHHHHhCcccc
Confidence            99999999999995

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-38  Score=249.73  Aligned_cols=203  Identities=18%  Similarity=0.280  Sum_probs=161.9

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCcee-EEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQL-FYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~-~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ...+..+.+.+|+.++++++||||+++++++.+.+.. ++++|++.+|+|.+++..                ....+++.
T Consensus        61 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~----------------~~~~~~~~  124 (298)
T 3pls_A           61 TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS----------------PQRNPTVK  124 (298)
T ss_dssp             CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHC----------------TTCCCBHH
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhc----------------cccCCCHH
Confidence            4556778899999999999999999999999776654 999999999999777652                13567889


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc--------CCCCccccccccCceecCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI--------SSSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~  148 (245)
                      .+..++.|++.||+|||++|++|+||||+||+++.        ||.+.....        .....+++.|+|||.+.+  
T Consensus       125 ~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--  202 (298)
T 3pls_A          125 DLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT--  202 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTT--
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhcc--
Confidence            99999999999999999999999999999999976        776653322        123345889999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCC-CCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGL-PVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++||||||+++|+|++|.. ||...+............      ...       .+..+++.+.+++.+||+.||
T Consensus       203 ~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~l~~li~~~l~~~p  269 (298)
T 3pls_A          203 YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR------RLP-------QPEYCPDSLYQVMQQCWEADP  269 (298)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC------CCC-------CCTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC------CCC-------CCccchHHHHHHHHHHccCCh
Confidence            668999999999999999999555 455544444444433322      111       115578899999999999999


Q ss_pred             CCCccHHHHhhc
Q 037274          228 AKRPAAEAQVLQ  239 (245)
Q Consensus       228 ~~Rpt~~~~l~~  239 (245)
                      .+|||+.++++.
T Consensus       270 ~~Rps~~~ll~~  281 (298)
T 3pls_A          270 AVRPTFRVLVGE  281 (298)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999998753

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.7e-39  Score=257.69  Aligned_cols=210  Identities=16%  Similarity=0.177  Sum_probs=157.3

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ...........|+.++++++||||+++++++...+    ..++||||+++|+|.+++..                  ..+
T Consensus        57 ~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~------------------~~~  118 (322)
T 3soc_A           57 IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA------------------NVV  118 (322)
T ss_dssp             GGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH------------------CCB
T ss_pred             cCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh------------------cCC
Confidence            34455666778999999999999999999997744    47999999999999877752                  348


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhC----------CcccccCCCCceeccc--------ccCccccccCC------CCccccc
Q 037274           82 TVDCLAIAHKETLKGLSYLQGE----------GLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTW  137 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~----------~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~  137 (245)
                      ++..++.++.|++.||.|||+.          |++||||||+||+++.        ||.+.......      ...+|+.
T Consensus       119 ~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~  198 (322)
T 3soc_A          119 SWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR  198 (322)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCcc
Confidence            8999999999999999999999          9999999999999876        77765433222      2457999


Q ss_pred             cccCceecCCC---CCCCchhhHHHHHHHHHHHhhCCCCCCCCCch---------------HHHHHHHhcCCCCccCCCC
Q 037274          138 AAAPEVVNFGD---DYYSCKSDIWLIGITALQFPCGGLPVSRRQDL---------------DIMTKMLMKQPKSTSLQVA  199 (245)
Q Consensus       138 y~aPE~~~~~~---~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~---------------~~~~~~~~~~~~~~~~~~~  199 (245)
                      |+|||.+.+..   ..++.++|||||||++|+|++|+.||.+....               ..........      ...
T Consensus       199 y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  272 (322)
T 3soc_A          199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHK------KKR  272 (322)
T ss_dssp             GCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTS------CCC
T ss_pred             ccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcc------cCC
Confidence            99999997521   23556899999999999999999999764321               1111111111      000


Q ss_pred             CCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          200 PNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      +...........++++.+++.+||+.||.+|||+.++++.
T Consensus       273 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~  312 (322)
T 3soc_A          273 PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGER  312 (322)
T ss_dssp             CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            0000111113345679999999999999999999998863

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=9.5e-39  Score=252.38  Aligned_cols=208  Identities=17%  Similarity=0.213  Sum_probs=162.4

Q ss_pred             cHHHHHHHHHHHHHHhhCC--CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLS--HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~--h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+..+.+.+|+.++++++  |+||+++++++..++..+++|| +.+++|.+++..                 ...+++.
T Consensus        66 ~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~-----------------~~~~~~~  127 (313)
T 3cek_A           66 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK-----------------KKSIDPW  127 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHH-----------------CSSCCHH
T ss_pred             cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHh-----------------cCCCCHH
Confidence            4567788999999999997  5999999999999999999999 566799777652                 3467888


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-------ccCccccccCC------CCccccccccCceecCC----
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------FNDDTRNWISS------SSSITTWAAAPEVVNFG----  147 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~----  147 (245)
                      .+..++.|++.||.|||+.|++|+||||+||+++.       ||.+.......      ...+++.|+|||.+.+.    
T Consensus       128 ~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  207 (313)
T 3cek_A          128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR  207 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC---
T ss_pred             HHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhccccc
Confidence            99999999999999999999999999999999865       77765443221      33569999999998641    


Q ss_pred             -----CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchH-HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHH
Q 037274          148 -----DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLD-IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       148 -----~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  221 (245)
                           ...++.++||||||+++|+|++|..||....... ..........   .         ...+...+.++.+++.+
T Consensus       208 ~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~l~~li~~  275 (313)
T 3cek_A          208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH---E---------IEFPDIPEKDLQDVLKC  275 (313)
T ss_dssp             -------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS---C---------CCCCCCSCHHHHHHHHH
T ss_pred             ccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccc---c---------cCCcccchHHHHHHHHH
Confidence                 1357899999999999999999999998754332 2222221110   0         01114457899999999


Q ss_pred             hcCCCCCCCccHHHHhhcccccc
Q 037274          222 CLAPDPAKRPAAEAQVLQEMWHF  244 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~~~f~~  244 (245)
                      ||+.||.+|||++++++||||.-
T Consensus       276 ~l~~dp~~Rps~~ell~h~~~~~  298 (313)
T 3cek_A          276 CLKRDPKQRISIPELLAHPYVQI  298 (313)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHC
T ss_pred             HccCCcccCcCHHHHhcCccccC
Confidence            99999999999999999999863

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=1.1e-38  Score=252.08  Aligned_cols=207  Identities=19%  Similarity=0.297  Sum_probs=162.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCce-----eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ-----LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~-----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      .....+.+.+|+.++++++||||+++++++...+.     .++++|++++++|.+++....           .......+
T Consensus        76 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-----------~~~~~~~~  144 (313)
T 3brb_A           76 SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSR-----------LETGPKHI  144 (313)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTT-----------BTTSCCCC
T ss_pred             chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhh-----------hhcCCccC
Confidence            45567889999999999999999999999876543     599999999999988774211           11124568


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFG  147 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~  147 (245)
                      ++..++.++.|++.||.|||++|++|+||||+||+++.        ||.+......      ....+++.|+|||.+.+ 
T Consensus       145 ~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-  223 (313)
T 3brb_A          145 PLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD-  223 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHS-
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcC-
Confidence            99999999999999999999999999999999999976        7766543322      12334778999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ..++.++||||||+++|+|++ |..||..................             ..+..+++++.+++.+||..|
T Consensus       224 -~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~li~~~l~~d  289 (313)
T 3brb_A          224 -RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL-------------KQPEDCLDELYEIMYSCWRTD  289 (313)
T ss_dssp             -SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC-------------CCBTTCCHHHHHHHHHTTCSS
T ss_pred             -CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC-------------CCCccccHHHHHHHHHHcCCC
Confidence             668999999999999999999 88999887777666555443210             111567899999999999999


Q ss_pred             CCCCccHHHHhhc
Q 037274          227 PAKRPAAEAQVLQ  239 (245)
Q Consensus       227 p~~Rpt~~~~l~~  239 (245)
                      |.+|||+.+++++
T Consensus       290 p~~Rps~~~l~~~  302 (313)
T 3brb_A          290 PLDRPTFSVLRLQ  302 (313)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999865

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.4e-39  Score=267.67  Aligned_cols=199  Identities=16%  Similarity=0.261  Sum_probs=160.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.. +..++||||+++|+|.+++..               .....+++..+..+
T Consensus       222 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~---------------~~~~~~~~~~~~~i  285 (452)
T 1fmk_A          222 SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG---------------ETGKYLRLPQLVDM  285 (452)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSH---------------HHHTTCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHh---------------cCCCCCCHHHHHHH
Confidence            45679999999999999999999998865 678999999999999877752               11345889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||+|||++|++||||||+|||++.        ||++.......     ...+++.|+|||.+.+  ..++.++|
T Consensus       286 ~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~sD  363 (452)
T 1fmk_A          286 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--GRFTIKSD  363 (452)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHH--CCCCHHHH
T ss_pred             HHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhc--CCCCcccc
Confidence            999999999999999999999999999975        77776543221     2234678999999987  56899999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||+++|+|++ |..||.+....+....+....      ..+.       +..+++.+.+++.+||+.||.+|||+++
T Consensus       364 vwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~------~~~~-------~~~~~~~l~~li~~cl~~dP~~Rpt~~~  430 (452)
T 1fmk_A          364 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY------RMPC-------PPECPESLHDLMCQCWRKEPEERPTFEY  430 (452)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC------CCCC-------CTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CCCC-------CCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence            9999999999999 999999877766665554332      1111       1567899999999999999999999999


Q ss_pred             Hhhc
Q 037274          236 QVLQ  239 (245)
Q Consensus       236 ~l~~  239 (245)
                      +++.
T Consensus       431 l~~~  434 (452)
T 1fmk_A          431 LQAF  434 (452)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8753

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.7e-39  Score=261.41  Aligned_cols=219  Identities=13%  Similarity=0.137  Sum_probs=164.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCce-------eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ-------LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~-------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ......+|++.++.++||||+++++++...+.       .++||||+++ +|.+.+.           ..  ......++
T Consensus        62 ~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-----------~~--~~~~~~~~  127 (360)
T 3e3p_A           62 FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCR-----------NY--YRRQVAPP  127 (360)
T ss_dssp             CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHH-----------HH--HTTTCCCC
T ss_pred             ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHH-----------HH--hhcccCCC
Confidence            34456778888899999999999999866443       8899999986 5543332           11  11245688


Q ss_pred             HHHHHHHHHHHHHHHHHHH--hCCcccccCCCCceeccc---------ccCccccccCC---CCccccccccCceecCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQ--GEGLFHKNISAGHILHNI---------FNDDTRNWISS---SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh--~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~  148 (245)
                      +..+..++.|++.||.|||  +.|++||||||+||+++.         ||.+.......   ...+|+.|+|||.+.+ .
T Consensus       128 ~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~  206 (360)
T 3e3p_A          128 PILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG-N  206 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTT-C
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcC-C
Confidence            9999999999999999999  999999999999999974         77776544332   3456999999999865 3


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc------------CCC---CCCC---CCCCCccc
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS------------LQV---APNE---DTTHGTRT  210 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------~~~---~~~~---~~~~~~~~  210 (245)
                      ..++.++|||||||++|+|++|..||.+.+.......+.........            ...   ....   ........
T Consensus       207 ~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (360)
T 3e3p_A          207 QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLK  286 (360)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCT
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhcc
Confidence            45899999999999999999999999998777666665543211100            000   0000   00011133


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .++++.++|.+||+.||.+|||+.++++||||.
T Consensus       287 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  319 (360)
T 3e3p_A          287 DAKEAYDLLSALLQYLPEERMKPYEALCHPYFD  319 (360)
T ss_dssp             THHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGG
T ss_pred             ccHHHHHHHHHHhccCccccCCHHHHhcCcccc
Confidence            678999999999999999999999999999995

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.2e-38  Score=249.01  Aligned_cols=208  Identities=20%  Similarity=0.288  Sum_probs=159.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||++++++. ..+..++|+||+++++|.+++..                ....+++..+
T Consensus        60 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~  122 (289)
T 3og7_A           60 TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHA----------------SETKFEMKKL  122 (289)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTT----------------C---CCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhh----------------ccCCCCHHHH
Confidence            556778899999999999999999999964 56678999999999999776642                1345888999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------CCCCccccccccCceecC-CCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------SSSSSITTWAAAPEVVNF-GDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------~~~~~~~~~y~aPE~~~~-~~~~~  151 (245)
                      +.++.|++.||.|||+.|++|+||||+||+++.        ||.+.....      .....+|+.|+|||.+.. ....+
T Consensus       123 ~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  202 (289)
T 3og7_A          123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY  202 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCS
T ss_pred             HHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCC
Confidence            999999999999999999999999999999975        666543322      112356999999999862 12567


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++||||||+++|+|++|..||......................        ......+++.+.+++.+||+.||.+||
T Consensus       203 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rp  274 (289)
T 3og7_A          203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL--------SKVRSNCPKRMKRLMAECLKKKRDERP  274 (289)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCT--------TSSCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             CcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcch--------hhccccCCHHHHHHHHHHccCChhhCC
Confidence            899999999999999999999998876665555444433211110        111256789999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |+.++++.
T Consensus       275 s~~ell~~  282 (289)
T 3og7_A          275 SFPRILAE  282 (289)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99998863

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=8.5e-39  Score=250.95  Aligned_cols=203  Identities=18%  Similarity=0.281  Sum_probs=162.6

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEE-eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMI-SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ......+.+.+|+.++++++||||+++++++. .++..+++||++++|+|.+++..                ....+++.
T Consensus        65 ~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~----------------~~~~~~~~  128 (298)
T 3f66_A           65 TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN----------------ETHNPTVK  128 (298)
T ss_dssp             CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHC----------------TTCCCCHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHh----------------cccCCCHH
Confidence            45567788999999999999999999999864 45678999999999999777752                13457889


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC--------CCCccccccccCceecCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS--------SSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~  148 (245)
                      .++.++.|++.||.|||++|++|+||||+||+++.        ||.+......        ....+++.|+|||.+.+  
T Consensus       129 ~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--  206 (298)
T 3f66_A          129 DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT--  206 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcC--
Confidence            99999999999999999999999999999999976        6666533221        12334778999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++||||||+++|++++ |.+||...+..+..........      ..       .+..+++.+.+++.+||+.||
T Consensus       207 ~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~l~~li~~~l~~~p  273 (298)
T 3f66_A          207 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR------LL-------QPEYCPDPLYEVMLKCWHPKA  273 (298)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCC------CC-------CCTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCC------CC-------CCccCCHHHHHHHHHHcCCCh
Confidence            668999999999999999999 5667776665555544443321      11       114578899999999999999


Q ss_pred             CCCccHHHHhhc
Q 037274          228 AKRPAAEAQVLQ  239 (245)
Q Consensus       228 ~~Rpt~~~~l~~  239 (245)
                      .+|||+.++++.
T Consensus       274 ~~Rps~~ell~~  285 (298)
T 3f66_A          274 EMRPSFSELVSR  285 (298)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999998763

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-39  Score=261.14  Aligned_cols=203  Identities=18%  Similarity=0.275  Sum_probs=158.9

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEE-eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMI-SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ......+.+.+|+.++++++||||+++++++. .++..++||||+++|+|.+++..                ....+++.
T Consensus       129 ~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~----------------~~~~~~~~  192 (373)
T 3c1x_A          129 TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN----------------ETHNPTVK  192 (373)
T ss_dssp             SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHC----------------TTCCCBHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhh----------------cccCCCHH
Confidence            34567888999999999999999999999865 45678999999999999877753                13457888


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--------CCccccccccCceecCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~  148 (245)
                      .+..++.|++.||.|||++|++||||||+||+++.        ||++.......        ...+++.|+|||.+.+  
T Consensus       193 ~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--  270 (373)
T 3c1x_A          193 DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT--  270 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcC--
Confidence            99999999999999999999999999999999976        77765432211        2234678999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++||||||+++|+|++ |.+||...+..+....+.....      ..       .+..+++.+.+++.+||+.||
T Consensus       271 ~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~------~~-------~p~~~~~~l~~li~~cl~~dp  337 (373)
T 3c1x_A          271 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR------LL-------QPEYCPDPLYEVMLKCWHPKA  337 (373)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCC------CC-------CCTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCC------CC-------CCCCCCHHHHHHHHHHcCCCh
Confidence            668999999999999999999 6788877666555554433221      11       114578899999999999999


Q ss_pred             CCCccHHHHhhc
Q 037274          228 AKRPAAEAQVLQ  239 (245)
Q Consensus       228 ~~Rpt~~~~l~~  239 (245)
                      .+|||+.+++++
T Consensus       338 ~~RPs~~ell~~  349 (373)
T 3c1x_A          338 EMRPSFSELVSR  349 (373)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999998764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=9.7e-39  Score=272.51  Aligned_cols=199  Identities=19%  Similarity=0.269  Sum_probs=163.7

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|++++++++||||+++++++.. +..++||||+++|+|.+++..                ....+++..+.
T Consensus       377 ~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~----------------~~~~l~~~~~~  439 (613)
T 2ozo_A          377 KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVG----------------KREEIPVSNVA  439 (613)
T ss_dssp             STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTT----------------CTTTSCHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhh----------------ccCCCCHHHHH
Confidence            4467889999999999999999999999865 569999999999999777642                13458899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      .++.||+.||+|||++|++||||||+|||++.        ||++.......       ...+++.|+|||.+.+  ..++
T Consensus       440 ~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~--~~~~  517 (613)
T 2ozo_A          440 ELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF--RKFS  517 (613)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHH--CCCC
T ss_pred             HHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcC--CCCC
Confidence            99999999999999999999999999999875        88876543222       1223578999999987  5699


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|||++ |..||.+.+..+....+....      ...       .+..+++++.++|..||+.||.+||
T Consensus       518 ~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~------~~~-------~p~~~~~~l~~li~~cl~~dP~~RP  584 (613)
T 2ozo_A          518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK------RME-------CPPECPPELYALMSDCWIYKWEDRP  584 (613)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTC------CCC-------CCTTCCHHHHHHHHHTTCSSTTTSC
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC------CCC-------CCCcCCHHHHHHHHHHcCCChhHCc
Confidence            99999999999999998 999999887777666554432      111       1156889999999999999999999


Q ss_pred             cHHHHhh
Q 037274          232 AAEAQVL  238 (245)
Q Consensus       232 t~~~~l~  238 (245)
                      ++.++++
T Consensus       585 s~~~l~~  591 (613)
T 2ozo_A          585 DFLTVEQ  591 (613)
T ss_dssp             CHHHHHH
T ss_pred             CHHHHHH
Confidence            9999854

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.1e-38  Score=249.51  Aligned_cols=197  Identities=16%  Similarity=0.271  Sum_probs=161.4

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++||||+++++++ ..+..++|+|++++++|.+++..                 ...+++..++.
T Consensus        60 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~~~  121 (291)
T 1xbb_A           60 ALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ-----------------NRHVKDKNIIE  121 (291)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHH-----------------CTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHh-----------------CcCCCHHHHHH
Confidence            4577899999999999999999999998 56778999999999999777752                 34588999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCCCc
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ++.|++.||.|||+.|++|+||||+||+++.        ||.+.......       ...+++.|+|||.+.+  ..++.
T Consensus       122 i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  199 (291)
T 1xbb_A          122 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY--YKFSS  199 (291)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHH--CEEEH
T ss_pred             HHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhcc--CCCCh
Confidence            9999999999999999999999999999875        77665433221       2234688999999987  56889


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|+|++ |..||...........+.....      .       ..+..+++.+.+++.+||+.||.+||+
T Consensus       200 ~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~l~~li~~~l~~dp~~Rps  266 (291)
T 1xbb_A          200 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER------M-------GCPAGCPREMYDLMNLCWTYDVENRPG  266 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC------C-------CCCTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             hhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC------C-------CCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence            9999999999999999 9999998776555544433221      0       112567899999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      +.++++
T Consensus       267 ~~~l~~  272 (291)
T 1xbb_A          267 FAAVEL  272 (291)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=4.4e-39  Score=262.03  Aligned_cols=221  Identities=14%  Similarity=0.182  Sum_probs=160.9

Q ss_pred             cccHHHHHHHHHHHHHHhhCC--------CCCeeeEEEEEE----eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLS--------HPNIIPIYKTMI----SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI   72 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~--------h~~Iv~~~~~~~----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~   72 (245)
                      .......+.+.+|+.++++++        |+||+++++++.    .....++|||++.+ +|.+.+.             
T Consensus        71 ~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-------------  136 (397)
T 1wak_A           71 KSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH-HLLKWII-------------  136 (397)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCC-BHHHHHH-------------
T ss_pred             ecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCc-cHHHHHH-------------
Confidence            344566788999999999995        788999999987    45679999999954 5544332             


Q ss_pred             hhhccCCCCcHHHHHHHHHHHHHHHHHHHhC-CcccccCCCCceeccc--------------------------------
Q 037274           73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGE-GLFHKNISAGHILHNI--------------------------------  119 (245)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------------------------------  119 (245)
                        ......+++..++.++.||+.||.|||++ |++||||||+|||++.                                
T Consensus       137 --~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (397)
T 1wak_A          137 --KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP  214 (397)
T ss_dssp             --HTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC-------------------
T ss_pred             --hcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCC
Confidence              11235689999999999999999999998 9999999999999962                                


Q ss_pred             -------------------------ccCccccccC-CCCccccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCC
Q 037274          120 -------------------------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP  173 (245)
Q Consensus       120 -------------------------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p  173 (245)
                                               ||.+...... ....+|+.|+|||++.+  ..++.++|||||||++|+|++|..|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~p  292 (397)
T 1wak_A          215 ATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIG--SGYNTPADIWSTACMAFELATGDYL  292 (397)
T ss_dssp             --CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHT--SCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcC--CCCCcHHHHHHHHHHHHHHhhCCCC
Confidence                                     5544433222 23456999999999987  5689999999999999999999999


Q ss_pred             CCCCCch------HHHHHHHhcCCCC------------ccCC-------CCCCC---------CCCCCcccccHHHHHHH
Q 037274          174 VSRRQDL------DIMTKMLMKQPKS------------TSLQ-------VAPNE---------DTTHGTRTLSKNFWNMV  219 (245)
Q Consensus       174 ~~~~~~~------~~~~~~~~~~~~~------------~~~~-------~~~~~---------~~~~~~~~~~~~~~~li  219 (245)
                      |...+..      .....+.......            ..+.       .....         .........+..+.++|
T Consensus       293 f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  372 (397)
T 1wak_A          293 FEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFL  372 (397)
T ss_dssp             CCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred             CCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHH
Confidence            9764422      1222221111000            0000       00000         00011234567789999


Q ss_pred             HHhcCCCCCCCccHHHHhhccccc
Q 037274          220 KICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       220 ~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+||+.||.+|||++++++||||.
T Consensus       373 ~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          373 LPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             GGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             HHHhccChhhcCCHHHHhhCcccc
Confidence            999999999999999999999996

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1.2e-38  Score=251.97  Aligned_cols=219  Identities=16%  Similarity=0.252  Sum_probs=166.3

Q ss_pred             ccHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCc-eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            6 HQAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQR-QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ...+..+.+.+|+.+++++ +||||+++++++...+ ..++++||+++++|.+++........... ..........+++
T Consensus        69 ~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~-~~~~~~~~~~~~~  147 (316)
T 2xir_A           69 ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK-VAPEDLYKDFLTL  147 (316)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC--------CTTCEEH
T ss_pred             CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhccccccccc-ccchhhhccccCH
Confidence            3455677899999999999 6899999999987654 49999999999999988864322100000 0000011234889


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~  149 (245)
                      ..++.++.|++.||.|||+.|++|+||||+||+++.        ||.+.......      ...+++.|+|||.+.+  .
T Consensus       148 ~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~  225 (316)
T 2xir_A          148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--R  225 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH--C
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcc--c
Confidence            999999999999999999999999999999999975        77665433221      2334788999999987  5


Q ss_pred             CCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      .++.++||||||+++|+|++ |..||..................     ..       .+..+++++.+++.+||+.||.
T Consensus       226 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~l~~li~~~l~~dp~  293 (316)
T 2xir_A          226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-----MR-------APDYTTPEMYQTMLDCWHGEPS  293 (316)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCC-----CC-------CCTTCCHHHHHHHHHHTCSSGG
T ss_pred             cccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCcc-----CC-------CCCCCCHHHHHHHHHHcCCChh
Confidence            68999999999999999998 99999876654444333332211     00       1145788999999999999999


Q ss_pred             CCccHHHHhhc
Q 037274          229 KRPAAEAQVLQ  239 (245)
Q Consensus       229 ~Rpt~~~~l~~  239 (245)
                      +|||+.++++|
T Consensus       294 ~Rps~~ell~~  304 (316)
T 2xir_A          294 QRPTFSELVEH  304 (316)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999999876

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=8.5e-39  Score=254.09  Aligned_cols=201  Identities=16%  Similarity=0.271  Sum_probs=160.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.++++++||||+++++++..++ .+++++++.+|+|.+++..                ....+++..+
T Consensus        57 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~----------------~~~~~~~~~~  119 (327)
T 3lzb_A           57 SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVRE----------------HKDNIGSQYL  119 (327)
T ss_dssp             SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHH----------------TTTCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHh----------------cCCCCCHHHH
Confidence            3446678999999999999999999999987654 8899999999999776652                1346889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +.++.|++.||.|||+.|++||||||+||+++.        ||.+.......      ...+++.|+|||.+.+  ..++
T Consensus       120 ~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~  197 (327)
T 3lzb_A          120 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--RIYT  197 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHH--CCCC
T ss_pred             HHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcC--CCCC
Confidence            999999999999999999999999999999975        77765443222      2234778999999987  6689


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|+|++ |..||.+.........+....      ..+.       +..++.++.+++.+||+.||.+||
T Consensus       198 ~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~l~~li~~~l~~dp~~Rp  264 (327)
T 3lzb_A          198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE------RLPQ-------PPICTIDVYMIMRKCWMIDADSRP  264 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC------CCCC-------CTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             hHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC------CCCC-------CccCCHHHHHHHHHHcCCChhHCc
Confidence            99999999999999999 999999877666555443332      1111       155788999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |+.++++.
T Consensus       265 s~~ell~~  272 (327)
T 3lzb_A          265 KFRELIIE  272 (327)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99998863

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=8e-39  Score=250.79  Aligned_cols=205  Identities=18%  Similarity=0.192  Sum_probs=157.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+..+.+.+|++++++++||||+++++++...  ...++||||+++|+|.+++...                ...+++.
T Consensus        51 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~~~~~~  114 (295)
T 3ugc_A           51 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH----------------KERIDHI  114 (295)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHC----------------GGGCCHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhc----------------ccccCHH
Confidence            456678899999999999999999999998653  4589999999999998877531                2348889


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~  149 (245)
                      .+..++.|++.||.|||+.|++|+||||+||+++.        ||.+.......       ...+++.|+|||.+.+  .
T Consensus       115 ~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~  192 (295)
T 3ugc_A          115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE--S  192 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHH--C
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcC--C
Confidence            99999999999999999999999999999999975        77766443221       2334677999999987  5


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHH------------HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHH
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDI------------MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWN  217 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (245)
                      .++.++||||||+++|+|++|..|+........            ............         ....+..+++++.+
T Consensus       193 ~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~  263 (295)
T 3ugc_A          193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG---------RLPRPDGCPDEIYM  263 (295)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC---------CCCCCTTCCHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccC---------cCCCCcCcCHHHHH
Confidence            689999999999999999999999875221100            000000000000         01112568899999


Q ss_pred             HHHHhcCCCCCCCccHHHHhh
Q 037274          218 MVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      ++..||+.||.+|||+.++++
T Consensus       264 li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          264 IMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhhCCCHHHHHH
Confidence            999999999999999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=7.7e-39  Score=252.26  Aligned_cols=204  Identities=20%  Similarity=0.232  Sum_probs=155.8

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      -......+.+.+|++++++++||||+++++++.  +..++||||+++|+|.+++....              ....++..
T Consensus        39 ~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~--------------~~~~~~~~  102 (307)
T 2eva_A           39 IESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAE--------------PLPYYTAA  102 (307)
T ss_dssp             CSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSS--------------SEECCCHH
T ss_pred             ecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccC--------------CCCccCHH
Confidence            344556788999999999999999999999875  45899999999999988775311              12346788


Q ss_pred             HHHHHHHHHHHHHHHHHh---CCcccccCCCCceeccc---------ccCcccccc-CCCCccccccccCceecCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQG---EGLFHKNISAGHILHNI---------FNDDTRNWI-SSSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~---~~ivH~dlkp~nil~~~---------f~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      .++.++.|++.||.|||+   +|++|+||||+||+++.         ||.+..... .....+|+.|+|||.+.+  ..+
T Consensus       103 ~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~  180 (307)
T 2eva_A          103 HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEG--SNY  180 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHHHTC--CCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhhhCC--CCC
Confidence            899999999999999999   89999999999999865         565543322 123456999999999987  568


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchH--HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLD--IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      +.++||||||+++|+|++|+.||.......  .........      .       ......+++.+.+++.+||+.||.+
T Consensus       181 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~l~~li~~~l~~dp~~  247 (307)
T 2eva_A          181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT------R-------PPLIKNLPKPIESLMTRCWSKDPSQ  247 (307)
T ss_dssp             CTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC------C-------CCCBTTCCHHHHHHHHHHTCSSGGG
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC------C-------CCcccccCHHHHHHHHHHhcCChhh
Confidence            999999999999999999999998643322  111111111      0       0112567899999999999999999


Q ss_pred             CccHHHHhhc
Q 037274          230 RPAAEAQVLQ  239 (245)
Q Consensus       230 Rpt~~~~l~~  239 (245)
                      |||+++++++
T Consensus       248 Rps~~ell~~  257 (307)
T 2eva_A          248 RPSMEEIVKI  257 (307)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999863

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.6e-38  Score=249.46  Aligned_cols=202  Identities=14%  Similarity=0.126  Sum_probs=155.4

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++..++..++++|++++++|.+++..                 ...+++..+
T Consensus        74 ~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------------~~~~~~~~~  136 (309)
T 2h34_A           74 DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRR-----------------QGPLAPPRA  136 (309)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHH-----------------HCSCCHHHH
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHh-----------------cCCCCHHHH
Confidence            344568899999999999999999999999999999999999999999777752                 245889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ..++.|++.||.|||+.|++|+||||+||+++.        ||.+.......     ...+++.|+|||.+.+  ..++.
T Consensus       137 ~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~  214 (309)
T 2h34_A          137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSE--SHATY  214 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC------C
T ss_pred             HHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcC--CCCCc
Confidence            999999999999999999999999999999975        66554333221     3356899999999986  56889


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-c
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-A  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-t  232 (245)
                      ++||||||+++|+|++|..||...........+..... .          .......+++++.+++.+||+.||.+|| +
T Consensus       215 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s  283 (309)
T 2h34_A          215 RADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIP-R----------PSTVRPGIPVAFDAVIARGMAKNPEDRYVT  283 (309)
T ss_dssp             CCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCC-C----------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSS
T ss_pred             hHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCC-C----------ccccCCCCCHHHHHHHHHhccCCHHHHHHh
Confidence            99999999999999999999987554422222221110 0          0111256788999999999999999999 7


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      +++++.
T Consensus       284 ~~~l~~  289 (309)
T 2h34_A          284 CGDLSA  289 (309)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777664

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=4.7e-38  Score=245.47  Aligned_cols=197  Identities=19%  Similarity=0.248  Sum_probs=156.8

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      +.+.+|+.++++++||||+++++++.+..  ++||||+++|+|.+++..                ....+++..++.++.
T Consensus        68 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~~~~  129 (287)
T 4f0f_A           68 QEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLD----------------KAHPIKWSVKLRLML  129 (287)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHC----------------TTSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhc----------------ccCCccHHHHHHHHH
Confidence            78999999999999999999999986554  799999999999766542                234688999999999


Q ss_pred             HHHHHHHHHHhCC--cccccCCCCceeccc-------------ccCccccccC-CCCccccccccCceecCCCCCCCchh
Q 037274           92 ETLKGLSYLQGEG--LFHKNISAGHILHNI-------------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        92 qi~~~l~~lh~~~--ivH~dlkp~nil~~~-------------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      |++.||+|||+.|  ++|+||||+||+++.             ||.+...... ....+++.|+|||.+.+....++.++
T Consensus       130 ~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~  209 (287)
T 4f0f_A          130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKA  209 (287)
T ss_dssp             HHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHH
T ss_pred             HHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchh
Confidence            9999999999999  999999999999853             5555433222 13456999999999854345678999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHH--HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDI--MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ||||||+++|+|++|..||........  .........   .         ...+..+++++.+++.+||+.||.+|||+
T Consensus       210 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~  277 (287)
T 4f0f_A          210 DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL---R---------PTIPEDCPPRLRNVIELCWSGDPKKRPHF  277 (287)
T ss_dssp             HHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC---C---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC---C---------CCCCcccCHHHHHHHHHHhcCChhhCcCH
Confidence            999999999999999999987654433  222221110   0         01125678999999999999999999999


Q ss_pred             HHHhh
Q 037274          234 EAQVL  238 (245)
Q Consensus       234 ~~~l~  238 (245)
                      +++++
T Consensus       278 ~~ll~  282 (287)
T 4f0f_A          278 SYIVK  282 (287)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=5.4e-39  Score=272.59  Aligned_cols=221  Identities=14%  Similarity=0.137  Sum_probs=165.8

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe------CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS------QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY   79 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   79 (245)
                      ......+.+.+|++++++++||||+++++++..      ++..++||||+++|+|.+++...              ....
T Consensus        51 ~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~--------------~~~~  116 (676)
T 3qa8_A           51 LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF--------------ENCC  116 (676)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSS--------------SCTT
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhc--------------ccCC
Confidence            456678889999999999999999999998755      66789999999999998777531              1123


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceec
Q 037274           80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVN  145 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~  145 (245)
                      .+++..++.++.|++.||.|||+.|++|+||||+||+++.           ||.+.......   ...+++.|+|||.+.
T Consensus       117 ~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~  196 (676)
T 3qa8_A          117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLE  196 (676)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhc
Confidence            5888999999999999999999999999999999999973           66665443322   345699999999998


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHh-----------cCCCCccCCCCCCCCCCCCcccccHH
Q 037274          146 FGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLM-----------KQPKSTSLQVAPNEDTTHGTRTLSKN  214 (245)
Q Consensus       146 ~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (245)
                      +  ..++.++||||||+++|+|++|..||..............           .......+.. ...........+++.
T Consensus       197 ~--~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~-~lp~p~~l~~~ls~~  273 (676)
T 3qa8_A          197 Q--KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSS-VLPTPNHLSGILAGK  273 (676)
T ss_dssp             C--SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCS-SSCCSCCCCGGGHHH
T ss_pred             c--CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcccccccc-ccCCchhhchhhhHH
Confidence            7  6689999999999999999999999987433221100000           0000000000 000111223557889


Q ss_pred             HHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          215 FWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       215 ~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.+++..||..||.+|||+.++++||||.
T Consensus       274 L~dLI~~mL~~DP~kRPTa~elL~hp~F~  302 (676)
T 3qa8_A          274 LERWLQCMLMWHQRQRGTDPQNPNVGCFQ  302 (676)
T ss_dssp             HHHHHHHHSCSSCC---CCTTCCCCTTHH
T ss_pred             HHHHHHHHccCCHhhCcCHHHHhcCHHHH
Confidence            99999999999999999999999999985

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=4.5e-39  Score=260.02  Aligned_cols=220  Identities=15%  Similarity=0.185  Sum_probs=162.2

Q ss_pred             ccHHHHHHHHHHHHHHhhCC-----------CCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHH
Q 037274            6 HQAEEYAKLAREIYRYKHLS-----------HPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQ   70 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~-----------h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~   70 (245)
                      ......+.+.+|+.++++++           |+||+++++++...+    ..++++|++ +++|.+++..          
T Consensus        54 ~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~----------  122 (373)
T 1q8y_A           54 GDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKK----------  122 (373)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHH----------
T ss_pred             CCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHH----------
Confidence            34456778899999999886           889999999987654    689999999 7799776642          


Q ss_pred             HHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhC-CcccccCCCCceecc--------------cccCccccccC-CCCcc
Q 037274           71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGE-GLFHKNISAGHILHN--------------IFNDDTRNWIS-SSSSI  134 (245)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~--------------~f~~~~~~~~~-~~~~~  134 (245)
                           .....+++..+..++.||+.||.|||++ |++|+||||+||+++              +||.+...... ....+
T Consensus       123 -----~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  197 (373)
T 1q8y_A          123 -----YEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ  197 (373)
T ss_dssp             -----TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCS
T ss_pred             -----hhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCCCCCC
Confidence                 2234588999999999999999999998 999999999999983              17776544332 24467


Q ss_pred             ccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCc------hHHHHHHHhcCCCCc--------------
Q 037274          135 TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQD------LDIMTKMLMKQPKST--------------  194 (245)
Q Consensus       135 ~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~------~~~~~~~~~~~~~~~--------------  194 (245)
                      |+.|+|||.+.+  ..++.++||||||+++|+|++|..||.....      ......+........              
T Consensus       198 t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  275 (373)
T 1q8y_A          198 TREYRSPEVLLG--APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFF  275 (373)
T ss_dssp             CGGGCCHHHHHT--CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHB
T ss_pred             CccccCcHHHhC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhc
Confidence            999999999987  5689999999999999999999999986442      122222221110000              


Q ss_pred             -----cCCCCCCC---------CCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          195 -----SLQVAPNE---------DTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       195 -----~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                           ........         .....+...++++.++|.+||+.||.+|||++++++||||.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  338 (373)
T 1q8y_A          276 NSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK  338 (373)
T ss_dssp             CC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGT
T ss_pred             CCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhh
Confidence                 00000000         00112245678899999999999999999999999999996

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=8.9e-39  Score=248.58  Aligned_cols=198  Identities=17%  Similarity=0.316  Sum_probs=161.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++. ++..++|+|++++++|.+++..               .....+++..+..+
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~---------------~~~~~~~~~~~~~i  114 (279)
T 1qpc_A           51 SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKT---------------PSGIKLTINKLLDM  114 (279)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTS---------------HHHHTCCHHHHHHH
T ss_pred             cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhc---------------CCCCCCCHHHHHHH
Confidence            4578999999999999999999999875 5568999999999999777752               11235889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.|++.||.|||++|++|+||||+||+++.        ||.+.......     ...+++.|+|||.+.+  ..++.++|
T Consensus       115 ~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  192 (279)
T 1qpc_A          115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY--GTFTIKSD  192 (279)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHH--CEECHHHH
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhcc--CCCCchhh
Confidence            999999999999999999999999999976        66655433221     2334678999999987  56889999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||+++|+|++ |..||.+....+....+.....      .       ..+..+++++.+++.+||..||.+|||+++
T Consensus       193 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  259 (279)
T 1qpc_A          193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR------M-------VRPDNCPEELYQLMRLCWKERPEDRPTFDY  259 (279)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC------C-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccC------C-------CCcccccHHHHHHHHHHhccChhhCCCHHH
Confidence            9999999999999 8999988776665555433221      1       111567899999999999999999999999


Q ss_pred             Hhh
Q 037274          236 QVL  238 (245)
Q Consensus       236 ~l~  238 (245)
                      +++
T Consensus       260 l~~  262 (279)
T 1qpc_A          260 LRS  262 (279)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.5e-38  Score=272.08  Aligned_cols=197  Identities=16%  Similarity=0.269  Sum_probs=161.8

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ...+.+.+|++++++++||||+++++++. .+..++||||+++|+|.+++..                 ...+++..+..
T Consensus       412 ~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~-----------------~~~l~~~~~~~  473 (635)
T 4fl3_A          412 ALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQ-----------------NRHVKDKNIIE  473 (635)
T ss_dssp             GGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTEEHHHHHHH-----------------CTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCCCHHHHHhh-----------------CCCCCHHHHHH
Confidence            44678999999999999999999999986 4568999999999999777742                 34688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCCCc
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ++.||+.||+|||++||+||||||+|||++.        ||++.......       ...+++.|+|||.+.+  ..++.
T Consensus       474 i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~--~~~~~  551 (635)
T 4fl3_A          474 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY--YKFSS  551 (635)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHH--CCCCH
T ss_pred             HHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcC--CCCCc
Confidence            9999999999999999999999999999876        77665433221       2234678999999987  66999


Q ss_pred             hhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          154 KSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      ++||||||+++|+|++ |..||.+....+....+.....      ..       .+..+++++.++|..||+.||.+||+
T Consensus       552 ~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~------~~-------~p~~~~~~l~~li~~cl~~dP~~RPs  618 (635)
T 4fl3_A          552 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER------MG-------CPAGCPREMYDLMNLCWTYDVENRPG  618 (635)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC------CC-------CCTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC------CC-------CCCCCCHHHHHHHHHHcCCCHhHCcC
Confidence            9999999999999998 9999998777666555543321      11       11568899999999999999999999


Q ss_pred             HHHHhh
Q 037274          233 AEAQVL  238 (245)
Q Consensus       233 ~~~~l~  238 (245)
                      ++++++
T Consensus       619 ~~~l~~  624 (635)
T 4fl3_A          619 FAAVEL  624 (635)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.1e-38  Score=251.71  Aligned_cols=198  Identities=18%  Similarity=0.258  Sum_probs=159.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++. ++..++|+||+.+|+|.+++..                ....+++..+..+
T Consensus        58 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~~  120 (325)
T 3kex_A           58 SFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQ----------------HRGALGPQLLLNW  120 (325)
T ss_dssp             CBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHS----------------SGGGSCTTHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHH----------------ccccCCHHHHHHH
Confidence            3456788999999999999999999885 5668999999999999776652                1245788999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCCchh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      +.|++.||.|||+.|++||||||+||+++.        ||++.......      ...+++.|+|||.+.+  ..++.++
T Consensus       121 ~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~  198 (325)
T 3kex_A          121 GVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF--GKYTHQS  198 (325)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHH--CCCCHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhcc--CCCChhh
Confidence            999999999999999999999999999965        77776543222      2334778999999987  5689999


Q ss_pred             hHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      ||||||+++|+|++ |..||.+.........+....      ....       +..++.++.+++.+||+.||.+|||+.
T Consensus       199 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~~~li~~~l~~dp~~Rps~~  265 (325)
T 3kex_A          199 DVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE------RLAQ-------PQICTIDVYMVMVKCWMIDENIRPTFK  265 (325)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTC------BCCC-------CTTBCTTTTHHHHHHTCSCTTTSCCHH
T ss_pred             HhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCC------CCCC-------CCcCcHHHHHHHHHHcCCChhhCcCHH
Confidence            99999999999999 999999876666555443322      1111       144677899999999999999999999


Q ss_pred             HHhhc
Q 037274          235 AQVLQ  239 (245)
Q Consensus       235 ~~l~~  239 (245)
                      +++++
T Consensus       266 el~~~  270 (325)
T 3kex_A          266 ELANE  270 (325)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=5.1e-39  Score=249.84  Aligned_cols=202  Identities=20%  Similarity=0.314  Sum_probs=157.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC-ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ-RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .....+.+.+|++++++++||||+++++++... +..++|+|++++++|.+++..               .....+++..
T Consensus        54 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------~~~~~~~~~~  118 (278)
T 1byg_A           54 NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---------------RGRSVLGGDC  118 (278)
T ss_dssp             CCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHH---------------HHHHHCCHHH
T ss_pred             chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHh---------------cccccCCHHH
Confidence            344667899999999999999999999987544 478999999999999877752               1122367889


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCchhh
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +..++.|++.||.|||++|++|+||||+||+++.        ||.+....... ...+++.|+|||.+.+  ..++.++|
T Consensus       119 ~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~D  196 (278)
T 1byg_A          119 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE--KKFSTKSD  196 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHH--CCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCC--CCCCchhc
Confidence            9999999999999999999999999999999975        66654333222 3345789999999987  56899999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||+++|+|++ |..||......+....+....      ..       ..+..+++.+.+++.+||+.||.+|||+.+
T Consensus       197 i~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  263 (278)
T 1byg_A          197 VWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY------KM-------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQ  263 (278)
T ss_dssp             HHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC------CC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC------CC-------CCcccCCHHHHHHHHHHhcCChhhCCCHHH
Confidence            9999999999998 999998876666554443221      11       112567899999999999999999999999


Q ss_pred             Hhh
Q 037274          236 QVL  238 (245)
Q Consensus       236 ~l~  238 (245)
                      +++
T Consensus       264 l~~  266 (278)
T 1byg_A          264 LRE  266 (278)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.5e-39  Score=258.78  Aligned_cols=199  Identities=13%  Similarity=0.063  Sum_probs=157.8

Q ss_pred             HHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           11 YAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        11 ~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      .+.+.+|++++++| +||||+++++++..++..++|||++ +++|.+++...                ...+++..+..+
T Consensus        48 ~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----------------~~~~~~~~~~~i  110 (330)
T 2izr_A           48 APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLC----------------DRTFSLKTVLMI  110 (330)
T ss_dssp             SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHT----------------TTCCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHc----------------CCCCCHHHHHHH
Confidence            34688999999999 8999999999999999999999999 88998777521                356899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc-------------ccCccccccC-----------CCCccccccccCceec
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI-------------FNDDTRNWIS-----------SSSSITTWAAAPEVVN  145 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------------f~~~~~~~~~-----------~~~~~~~~y~aPE~~~  145 (245)
                      +.|++.||.|||+.|++||||||+||+++.             ||++......           ....||+.|+|||.+.
T Consensus       111 ~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  190 (330)
T 2izr_A          111 AIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHL  190 (330)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT
T ss_pred             HHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHc
Confidence            999999999999999999999999999864             6666543222           2445799999999998


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHH---HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHh
Q 037274          146 FGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDI---MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC  222 (245)
Q Consensus       146 ~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  222 (245)
                      +  ..++.++||||||+++|+|++|..||.+......   ...+.....     ..+.    .......+ ++.+++..|
T Consensus       191 ~--~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~-----~~~~----~~~~~~~p-~~~~li~~~  258 (330)
T 2izr_A          191 G--KEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR-----ATPI----EVLCENFP-EMATYLRYV  258 (330)
T ss_dssp             T--CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH-----HSCH----HHHTTTCH-HHHHHHHHH
T ss_pred             C--CCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc-----cCCH----HHHhccCh-HHHHHHHHH
Confidence            7  6689999999999999999999999987544332   222211110     0000    00002244 999999999


Q ss_pred             cCCCCCCCccHHHHhh
Q 037274          223 LAPDPAKRPAAEAQVL  238 (245)
Q Consensus       223 l~~~p~~Rpt~~~~l~  238 (245)
                      |+.||.+||+++++++
T Consensus       259 l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          259 RRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHCCTTCCCCHHHHHH
T ss_pred             HhCCCCCCCCHHHHHH
Confidence            9999999999998865

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=3.4e-38  Score=250.64  Aligned_cols=216  Identities=21%  Similarity=0.313  Sum_probs=147.6

Q ss_pred             cHHHHHHHHHHHH-HHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIY-RYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~-~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .......+..|+. +++.++||||+++++++..++..++|||++++ +|.+++..            ........+++..
T Consensus        60 ~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~------------~~~~~~~~~~~~~  126 (327)
T 3aln_A           60 DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKY------------VYSVLDDVIPEEI  126 (327)
T ss_dssp             CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHH------------HHHTTCCCCCHHH
T ss_pred             CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHH------------HHhhhcccCcHHH
Confidence            3455566667776 77888999999999999999999999999986 88766642            1111246688999


Q ss_pred             HHHHHHHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecC--CCCCC
Q 037274           86 LAIAHKETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNF--GDDYY  151 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~--~~~~~  151 (245)
                      +..++.|++.||.|||+. |++|+||||+||+++.        ||.+.......   ...+++.|+|||.+..  ....+
T Consensus       127 ~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  206 (327)
T 3aln_A          127 LGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGY  206 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------------------------------C
T ss_pred             HHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCC
Confidence            999999999999999999 9999999999999975        77665443222   2356899999999842  12558


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++||||||+++|+|++|..||.......  . .......     ...+.........+++.+.+++.+||+.||.+||
T Consensus       207 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~-~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  278 (327)
T 3aln_A          207 DVRSDVWSLGITLYELATGRFPYPKWNSVF--D-QLTQVVK-----GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRP  278 (327)
T ss_dssp             CSHHHHHHHHHHHHHHHHSCCCSSCC----------CCCCC-----SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCcchHH--H-HHHHHhc-----CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCc
Confidence            899999999999999999999998643211  1 1111111     1111111122256889999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      |+.++++||||.
T Consensus       279 s~~ell~hp~~~  290 (327)
T 3aln_A          279 KYKELLKHPFIL  290 (327)
T ss_dssp             CHHHHTTSHHHH
T ss_pred             CHHHHHhChHHH
Confidence            999999999984

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1e-38  Score=251.56  Aligned_cols=213  Identities=17%  Similarity=0.196  Sum_probs=163.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+.++++++||||+++++++.+++..++++|++++++|.+++..              ......+++..++
T Consensus        71 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------------~~~~~~~~~~~~~  136 (307)
T 2nru_A           71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC--------------LDGTPPLSWHMRC  136 (307)
T ss_dssp             TTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT--------------GGGCCCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHh--------------ccCCCCCCHHHHH
Confidence            45678899999999999999999999999999999999999999999777752              1123568899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------CCCCccccccccCceecCCCCCCCc
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------SSSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.|++.||.|||+.|++|+||||+||+++.        ||.+.....      .....+++.|+|||.+.+   .++.
T Consensus       137 ~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~  213 (307)
T 2nru_A          137 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG---EITP  213 (307)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT---EECT
T ss_pred             HHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC---CCCc
Confidence            99999999999999999999999999999976        666543322      123456999999998864   3789


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhc---CCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMK---QPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      ++||||||+++|+|++|..||...........+...   ......... .. .........++.+.+++.+||+.||.+|
T Consensus       214 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~li~~cl~~~p~~R  291 (307)
T 2nru_A          214 KSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI-DK-KMNDADSTSVEAMYSVASQCLHEKKNKR  291 (307)
T ss_dssp             HHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHS-CS-SCSCCCHHHHHHHHHHHHHHTCSSTTTS
T ss_pred             cchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhc-cc-cccccchHHHHHHHHHHHHHcCCCcccC
Confidence            999999999999999999999875443322111111   100000000 00 0011124567789999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      ||+.+++++
T Consensus       292 ps~~~l~~~  300 (307)
T 2nru_A          292 PDIKKVQQL  300 (307)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.4e-38  Score=267.87  Aligned_cols=199  Identities=16%  Similarity=0.261  Sum_probs=163.7

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+++|++|+|+||+++++++.. +..++||||+++|+|.+++..               .....+++..+..+
T Consensus       305 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~---------------~~~~~l~~~~~~~i  368 (535)
T 2h8h_A          305 SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKG---------------ETGKYLRLPQLVDM  368 (535)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSH---------------HHHTTCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhh---------------cCCCCCCHHHHHHH
Confidence            45679999999999999999999998865 678999999999999877752               11345888999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-----CCCccccccccCceecCCCCCCCchhh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.||+.||+|||++|++||||||+|||++.        ||++......     ....++..|+|||.+..  ..++.++|
T Consensus       369 ~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~sD  446 (535)
T 2h8h_A          369 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--GRFTIKSD  446 (535)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHH--CCCCHHHH
T ss_pred             HHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhcc--CCCCchhh
Confidence            999999999999999999999999999975        7777644321     12334678999999987  56899999


Q ss_pred             HHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          157 IWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       157 vwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||+++|+|++ |..||.+....+....+....      ..+.       +..+++.+.++|.+||+.||++|||+++
T Consensus       447 vwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~------~~~~-------~~~~~~~l~~li~~cl~~dP~~RPt~~~  513 (535)
T 2h8h_A          447 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY------RMPC-------PPECPESLHDLMCQCWRKEPEERPTFEY  513 (535)
T ss_dssp             HHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTC------CCCC-------CTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CCCC-------CCCCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            9999999999999 999999877766665554332      1111       1567899999999999999999999999


Q ss_pred             Hhhc
Q 037274          236 QVLQ  239 (245)
Q Consensus       236 ~l~~  239 (245)
                      +++.
T Consensus       514 l~~~  517 (535)
T 2h8h_A          514 LQAF  517 (535)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4.1e-39  Score=252.66  Aligned_cols=203  Identities=15%  Similarity=0.082  Sum_probs=160.0

Q ss_pred             HHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ...+.+.+|+.+++++ +|+||+++++++..++..++|+|++ +++|.+++..                ....+++..+.
T Consensus        47 ~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----------------~~~~~~~~~~~  109 (298)
T 1csn_A           47 SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDL----------------CGRKFSVKTVA  109 (298)
T ss_dssp             TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH----------------TTTCCCHHHHH
T ss_pred             CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHH----------------hccCCCHHHHH
Confidence            3445688999999999 7999999999999999999999999 8899877752                12458999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc-------------ccCccccccC-----------CCCccccccccCce
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------------FNDDTRNWIS-----------SSSSITTWAAAPEV  143 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------------f~~~~~~~~~-----------~~~~~~~~y~aPE~  143 (245)
                      .++.|++.||.|||++|++||||||+||+++.             ||.+......           ....+|+.|+|||.
T Consensus       110 ~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  189 (298)
T 1csn_A          110 MAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINT  189 (298)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             HHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchh
Confidence            99999999999999999999999999999953             6666543322           23456899999999


Q ss_pred             ecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCch---HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHH
Q 037274          144 VNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL---DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       144 ~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  220 (245)
                      +.+  ..++.++||||||+++|+|++|..||......   .....+.........         ......+++++.+++.
T Consensus       190 ~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~li~  258 (298)
T 1csn_A          190 HLG--REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL---------RELCAGFPEEFYKYMH  258 (298)
T ss_dssp             HTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH---------HHHTTTSCHHHHHHHH
T ss_pred             hcC--CCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH---------HHHHhhCcHHHHHHHH
Confidence            987  56899999999999999999999999875432   222222211100000         0011357899999999


Q ss_pred             HhcCCCCCCCccHHHHhhc
Q 037274          221 ICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~  239 (245)
                      .||+.||.+|||++++++.
T Consensus       259 ~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          259 YARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HHHHCCTTCCCCHHHHHHH
T ss_pred             HHhcCCcccCCCHHHHHHH
Confidence            9999999999999998653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=2.9e-38  Score=247.06  Aligned_cols=202  Identities=20%  Similarity=0.308  Sum_probs=162.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|++++++++||||+++++++..++ .++++|++++++|.+++..                ....+++..+
T Consensus        61 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~----------------~~~~~~~~~~  123 (291)
T 1u46_A           61 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRK----------------HQGHFLLGTL  123 (291)
T ss_dssp             -CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHH----------------HGGGSCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHh----------------ccCCcCHHHH
Confidence            3456788999999999999999999999987654 8999999999999776652                1235788999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ..++.|++.||.|||++|++|+||||+||+++.        ||.+.......       ...+++.|+|||.+.+  ..+
T Consensus       124 ~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  201 (291)
T 1u46_A          124 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT--RTF  201 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHH--CEE
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcC--CCC
Confidence            999999999999999999999999999999975        66654433221       2334778999999987  568


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|+|++ |..||...+.......+......     .       .....++.++.+++.+||..||.+|
T Consensus       202 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~~~l~~li~~~l~~~p~~R  269 (291)
T 1u46_A          202 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER-----L-------PRPEDCPQDIYNVMVQCWAHKPEDR  269 (291)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCC-----C-------CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCC-----C-------CCCcCcCHHHHHHHHHHccCCcccC
Confidence            899999999999999999 99999987766665555433211     0       1115678999999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      ||+.+++++
T Consensus       270 ps~~~l~~~  278 (291)
T 1u46_A          270 PTFVALRDF  278 (291)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999998864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.4e-37  Score=245.35  Aligned_cols=206  Identities=20%  Similarity=0.278  Sum_probs=157.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++..++..++|+|++++++|.+++..           .  ......+++..+
T Consensus        72 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------~--~~~~~~~~~~~~  138 (310)
T 2wqm_A           72 DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH-----------F--KKQKRLIPERTV  138 (310)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHH-----------H--HHTTCCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHH-----------h--cccccCCCHHHH
Confidence            456778899999999999999999999999999999999999999999887752           1  112456889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.++.|++.||.|||+.|++|+||||+||+++.        ||.+......    ....+++.|+|||.+.+  ..++.+
T Consensus       139 ~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~  216 (310)
T 2wqm_A          139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE--NGYNFK  216 (310)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTT--CCCCHH
T ss_pred             HHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCC--CCCCch
Confidence            999999999999999999999999999999985        6655433222    13346899999999987  568999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCch--HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDL--DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      +||||||+++|+|++|..||.+....  .....+....       .+     ......+++++.+++.+||..||.+|||
T Consensus       217 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps  284 (310)
T 2wqm_A          217 SDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD-------YP-----PLPSDHYSEELRQLVNMCINPDPEKRPD  284 (310)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC-------SC-----CCCTTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc-------CC-----CCcccccCHHHHHHHHHHcCCChhhCCC
Confidence            99999999999999999999764322  2222221111       00     0111457899999999999999999999


Q ss_pred             HHHHhhc
Q 037274          233 AEAQVLQ  239 (245)
Q Consensus       233 ~~~~l~~  239 (245)
                      +.+++++
T Consensus       285 ~~~il~~  291 (310)
T 2wqm_A          285 VTYVYDV  291 (310)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=3.2e-38  Score=249.93  Aligned_cols=205  Identities=16%  Similarity=0.207  Sum_probs=160.2

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      ....+..+.+.+|++++++++||||+++++++.+.  ...++||||+++|+|.+++..                  ..++
T Consensus        71 ~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------------------~~~~  132 (318)
T 3lxp_A           71 DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR------------------HSIG  132 (318)
T ss_dssp             TCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGG------------------SCCC
T ss_pred             ccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhh------------------CCCC
Confidence            34456788899999999999999999999999874  568999999999999777652                  3488


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------CCCccccccccCceecCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------SSSSITTWAAAPEVVNFG  147 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~  147 (245)
                      +..++.++.|++.||.|||+.|++|+||||+||+++.        ||.+......       ....+++.|+|||.+.+ 
T Consensus       133 ~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-  211 (318)
T 3lxp_A          133 LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE-  211 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcC-
Confidence            9999999999999999999999999999999999876        6666544322       12345778999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchH-----------HHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHH
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLD-----------IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFW  216 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (245)
                       ..++.++||||||+++|+|++|..||.......           .............         ....+..+++++.
T Consensus       212 -~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~  281 (318)
T 3lxp_A          212 -YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE---------RLPRPDKCPAEVY  281 (318)
T ss_dssp             -CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC---------CCCCCTTCCHHHH
T ss_pred             -CCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc---------CCCCCccccHHHH
Confidence             568899999999999999999999987632110           0001111100000         0111256889999


Q ss_pred             HHHHHhcCCCCCCCccHHHHhh
Q 037274          217 NMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       217 ~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      +++.+||+.||.+|||+.++++
T Consensus       282 ~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          282 HLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCcccCcCHHHHHH
Confidence            9999999999999999999875

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=246.31  Aligned_cols=205  Identities=23%  Similarity=0.353  Sum_probs=152.2

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+..+..+++.++||||+++++++..++..++|||++ ++.+..+..                .....+++..+..++
T Consensus        68 ~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~----------------~~~~~~~~~~~~~~~  130 (318)
T 2dyl_A           68 KRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKK----------------RMQGPIPERILGKMT  130 (318)
T ss_dssp             HHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHH----------------HHTSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHH----------------HhccCCCHHHHHHHH
Confidence            344455556788889999999999999999999999999 445544332                113568899999999


Q ss_pred             HHHHHHHHHHHhC-CcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecC---CCCCCCchh
Q 037274           91 KETLKGLSYLQGE-GLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNF---GDDYYSCKS  155 (245)
Q Consensus        91 ~qi~~~l~~lh~~-~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~---~~~~~~~~~  155 (245)
                      .|++.||.|||+. |++|+||||+||+++.        ||.+.......   ...+++.|+|||.+..   ....++.++
T Consensus       131 ~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~  210 (318)
T 2dyl_A          131 VAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRA  210 (318)
T ss_dssp             HHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHH
T ss_pred             HHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCcccc
Confidence            9999999999995 9999999999999976        66654332221   3456899999999853   124578999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCC-chHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQ-DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      ||||||+++|+|++|..||.... ...............    .       .....+++++.+++.+||+.||.+|||++
T Consensus       211 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~  279 (318)
T 2dyl_A          211 DVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL----L-------PGHMGFSGDFQSFVKDCLTKDHRKRPKYN  279 (318)
T ss_dssp             HHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC----C-------CSSSCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             chhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC----C-------CccCCCCHHHHHHHHHHccCChhHCcCHH
Confidence            99999999999999999998743 334444443322110    0       01145789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||.
T Consensus       280 ~ll~h~~~~  288 (318)
T 2dyl_A          280 KLLEHSFIK  288 (318)
T ss_dssp             HHTTSHHHH
T ss_pred             HHhhCHHHH
Confidence            999999985

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.9e-38  Score=252.84  Aligned_cols=203  Identities=13%  Similarity=0.077  Sum_probs=155.4

Q ss_pred             HHHHHHHHHhhCCCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           13 KLAREIYRYKHLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        13 ~~~~E~~~l~~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      .+.+|+..++.++||||+++++++..    .+..++|||++ +++|.+++..                 ...+++..++.
T Consensus        94 ~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~-----------------~~~~~~~~~~~  155 (345)
T 2v62_A           94 DCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ-----------------NGTFKKSTVLQ  155 (345)
T ss_dssp             HHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBG-----------------GGBCCHHHHHH
T ss_pred             HHHHHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHh-----------------cCCCCHHHHHH
Confidence            46678899999999999999999987    67899999999 8899777652                 22688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccC-----------CCCccccccccCceecCC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWIS-----------SSSSITTWAAAPEVVNFG  147 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~  147 (245)
                      ++.|++.||.|||+.|++||||||+||+++.          ||.+......           ....+|+.|+|||.+.+ 
T Consensus       156 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  234 (345)
T 2v62_A          156 LGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG-  234 (345)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT-
T ss_pred             HHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcC-
Confidence            9999999999999999999999999999963          6766433211           23456999999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ..++.++||||||+++|+|++|..||..... .............    ..+...........+++++.+++..||..|
T Consensus       235 -~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  309 (345)
T 2v62_A          235 -VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLD----ELPQSVLKWAPSGSSCCEIAQFLVCAHSLA  309 (345)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHH----TTTHHHHHHSCTTSCCHHHHHHHHHHHTCC
T ss_pred             -CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcc----cccHHHHhhccccccHHHHHHHHHHHhhcC
Confidence             5689999999999999999999999965322 2222211111100    000000000001368899999999999999


Q ss_pred             CCCCccHHHHhhc
Q 037274          227 PAKRPAAEAQVLQ  239 (245)
Q Consensus       227 p~~Rpt~~~~l~~  239 (245)
                      |.+|||++++++.
T Consensus       310 p~~Rps~~~l~~~  322 (345)
T 2v62_A          310 YDEKPNYQALKKI  322 (345)
T ss_dssp             TTCCCCHHHHHHH
T ss_pred             cccCCCHHHHHHH
Confidence            9999999998753

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=5e-38  Score=246.95  Aligned_cols=203  Identities=16%  Similarity=0.205  Sum_probs=157.6

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ...+.+.+|++++++++||||+++++++..+  +..++||||+++++|.+++..                ....+++..+
T Consensus        65 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~~~  128 (302)
T 4e5w_A           65 NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK----------------NKNKINLKQQ  128 (302)
T ss_dssp             CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHH----------------HTTTCCHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHh----------------ccccCCHHHH
Confidence            3457899999999999999999999999876  568999999999999777742                1345889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------CCCccccccccCceecCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------SSSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +.++.|++.||+|||++|++|+||||+||+++.        ||.+......       ....+|+.|+|||.+.+  ..+
T Consensus       129 ~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~  206 (302)
T 4e5w_A          129 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQ--SKF  206 (302)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHH--CEE
T ss_pred             HHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecC--CCC
Confidence            999999999999999999999999999999975        7766544322       23445778999999987  568


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCC-----------chHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQ-----------DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  220 (245)
                      +.++||||||+++|+|++|..|+....           .................         ...+..+++++.+++.
T Consensus       207 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~li~  277 (302)
T 4e5w_A          207 YIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR---------LPCPPNCPDEVYQLMR  277 (302)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCC---------CCCCTTCCHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCC---------CCCCCCCCHHHHHHHH
Confidence            899999999999999999998864311           01111111111111110         1112567899999999


Q ss_pred             HhcCCCCCCCccHHHHhh
Q 037274          221 ICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~  238 (245)
                      +||+.||.+|||+.++++
T Consensus       278 ~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          278 KCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HTTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCCCCCCCHHHHHH
Confidence            999999999999999876

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=7.1e-38  Score=245.94  Aligned_cols=206  Identities=18%  Similarity=0.175  Sum_probs=153.1

Q ss_pred             HHHHHHHHHHHHhh--CCCCCeeeEEEEEEeC----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           10 EYAKLAREIYRYKH--LSHPNIIPIYKTMISQ----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        10 ~~~~~~~E~~~l~~--l~h~~Iv~~~~~~~~~----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ..+.+..|.+++..  ++||||+++++++...    +..++||||+++|+|.++++                  ...+++
T Consensus        43 ~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~------------------~~~~~~  104 (301)
T 3q4u_A           43 DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ------------------LTTLDT  104 (301)
T ss_dssp             GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHT------------------TCCBCH
T ss_pred             cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHh------------------hcccCH
Confidence            34556667777666  7999999999986543    45899999999999977774                  246889


Q ss_pred             HHHHHHHHHHHHHHHHHH--------hCCcccccCCCCceeccc--------ccCccccccCC--------CCccccccc
Q 037274           84 DCLAIAHKETLKGLSYLQ--------GEGLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAA  139 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh--------~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~  139 (245)
                      ..++.++.|++.||+|||        +.|++||||||+||+++.        ||++.......        ...+|+.|+
T Consensus       105 ~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~  184 (301)
T 3q4u_A          105 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM  184 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccccccccccccccccee
Confidence            999999999999999999        999999999999999975        77765433222        236799999


Q ss_pred             cCceecCCCC----CCCchhhHHHHHHHHHHHhhC----------CCCCCCCCch----HHHHHHHhcCCCCccCCCCCC
Q 037274          140 APEVVNFGDD----YYSCKSDIWLIGITALQFPCG----------GLPVSRRQDL----DIMTKMLMKQPKSTSLQVAPN  201 (245)
Q Consensus       140 aPE~~~~~~~----~~~~~~DvwslG~~l~~~~~g----------~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  201 (245)
                      |||.+.++..    .++.++||||||+++|+|++|          ..||......    ...........      ..+.
T Consensus       185 aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~------~~~~  258 (301)
T 3q4u_A          185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQ------QRPN  258 (301)
T ss_dssp             CHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC------CCCC
T ss_pred             ChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccC------CCCC
Confidence            9999986211    345799999999999999999          8888653221    22222221110      0011


Q ss_pred             CCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          202 EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       202 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ..........++++.+++.+||+.||.+|||+.++++.
T Consensus       259 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~  296 (301)
T 3q4u_A          259 IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT  296 (301)
T ss_dssp             CCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             CChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            11111224467889999999999999999999999863

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.8e-37  Score=266.32  Aligned_cols=202  Identities=19%  Similarity=0.389  Sum_probs=165.0

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ...+..+.+.+|+.++++++||||+++++++ .++..++||||+++|+|.+++..                ....+++..
T Consensus       430 ~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~lv~E~~~~g~L~~~l~~----------------~~~~l~~~~  492 (656)
T 2j0j_A          430 TSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV----------------RKFSLDLAS  492 (656)
T ss_dssp             TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEEEECCTTCBHHHHHHH----------------TTTTCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCceEEEEEcCCCCcHHHHHHh----------------ccCCCCHHH
Confidence            3456678899999999999999999999988 45678999999999999777752                134588899


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +..++.|++.||.|||++|++||||||+|||++.        ||++.......     ...+++.|+|||.+.+  ..++
T Consensus       493 ~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~  570 (656)
T 2j0j_A          493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFT  570 (656)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHH--CCCC
T ss_pred             HHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcC--CCCC
Confidence            9999999999999999999999999999999975        88776543322     2334678999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|+|++ |..||.+....+....+.....      .+       .+..+++.+.+++.+||..||.+||
T Consensus       571 ~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~------~~-------~~~~~~~~l~~li~~~l~~dP~~RP  637 (656)
T 2j0j_A          571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER------LP-------MPPNCPPTLYSLMTKCWAYDPSRRP  637 (656)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCC------CC-------CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             chhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCC------CC-------CCccccHHHHHHHHHHcCCChhHCc
Confidence            99999999999999997 9999998777666665544321      11       1145789999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |+.++++.
T Consensus       638 s~~el~~~  645 (656)
T 2j0j_A          638 RFTELKAQ  645 (656)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99998753

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.6e-38  Score=251.67  Aligned_cols=202  Identities=17%  Similarity=0.245  Sum_probs=161.2

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++.+++..++++|++++++|.+++..                ....+++..++.+
T Consensus        72 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~----------------~~~~~~~~~~~~i  135 (319)
T 2y4i_B           72 QLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD----------------AKIVLDVNKTRQI  135 (319)
T ss_dssp             CCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTS----------------SCCCCCSHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHh----------------cCCCCCHHHHHHH
Confidence            345678899999999999999999999999999999999999999777652                1346889999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc-------ccCccccc---------cCCCCccccccccCceecCC------
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI-------FNDDTRNW---------ISSSSSITTWAAAPEVVNFG------  147 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------f~~~~~~~---------~~~~~~~~~~y~aPE~~~~~------  147 (245)
                      +.|++.||.|||+.|++|+||||+||+++.       ||.+....         ......+++.|+|||.+.+.      
T Consensus       136 ~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~  215 (319)
T 2y4i_B          136 AQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEE  215 (319)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--C
T ss_pred             HHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccc
Confidence            999999999999999999999999999875       66644321         11133468999999998741      


Q ss_pred             -CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 -DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 -~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ...++.++||||||+++|+|++|..||...................            .....++.++.+++.+||..|
T Consensus       216 ~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~li~~~l~~~  283 (319)
T 2y4i_B          216 DKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN------------LSQIGMGKEISDILLFCWAFE  283 (319)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC------------CCCSSCCTTHHHHHHHHHCSS
T ss_pred             cccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCC------------CCcCCCCHHHHHHHHHHhcCC
Confidence             2457899999999999999999999998876665554443322100            111357789999999999999


Q ss_pred             CCCCccHHHHhhc
Q 037274          227 PAKRPAAEAQVLQ  239 (245)
Q Consensus       227 p~~Rpt~~~~l~~  239 (245)
                      |.+|||+.++++.
T Consensus       284 p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          284 QEERPTFTKLMDM  296 (319)
T ss_dssp             TTTSCCHHHHHHH
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999998764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=7.4e-38  Score=248.72  Aligned_cols=206  Identities=19%  Similarity=0.255  Sum_probs=159.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEE--eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMI--SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+..+.+.+|++++++++||||+++++++.  ..+..++||||+++++|.+++..                ....+++.
T Consensus        64 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~  127 (327)
T 3lxl_A           64 GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR----------------HRARLDAS  127 (327)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHH----------------HGGGCCHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHh----------------cccCCCHH
Confidence            4556678999999999999999999999886  44568999999999999887752                12348899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------CCCccccccccCceecCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------SSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~  149 (245)
                      .++.++.|++.||+|||+.|++|+||||+||+++.        ||.+......       ....+++.|+|||.+.+  .
T Consensus       128 ~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~  205 (327)
T 3lxl_A          128 RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD--N  205 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHH--C
T ss_pred             HHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhcc--C
Confidence            99999999999999999999999999999999975        7766543322       23345778999999987  5


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHH-----------HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHH
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDI-----------MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM  218 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  218 (245)
                      .++.++||||||+++|+|++|..||........           ............         ....+..+++++.++
T Consensus       206 ~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~l  276 (327)
T 3lxl_A          206 IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ---------RLPAPPACPAEVHEL  276 (327)
T ss_dssp             EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC---------CCCCCTTCCHHHHHH
T ss_pred             CCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc---------CCCCCCcccHHHHHH
Confidence            689999999999999999999999875322110           011111110000         011125688999999


Q ss_pred             HHHhcCCCCCCCccHHHHhhc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      +.+||+.||.+|||+.+++++
T Consensus       277 i~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          277 MKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=2.5e-38  Score=255.00  Aligned_cols=202  Identities=13%  Similarity=0.080  Sum_probs=152.0

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEeC----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMISQ----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~~----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      +..|+..++.++||||+++++++...    ...++||||+ +++|.+++..                ....+++..+..+
T Consensus        95 ~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~----------------~~~~l~~~~~~~i  157 (364)
T 3op5_A           95 QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA----------------NAKRFSRKTVLQL  157 (364)
T ss_dssp             HHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH----------------TTSCCCHHHHHHH
T ss_pred             HHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh----------------ccCCCCHHHHHHH
Confidence            44566677788899999999998764    4489999999 8899777652                1356899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceecc--c--------ccCccccccC-----------CCCccccccccCceecCCC
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHN--I--------FNDDTRNWIS-----------SSSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~--~--------f~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~  148 (245)
                      +.||+.||.|||+.|++||||||+|||++  .        ||++......           ....+|+.|+|||.+.+  
T Consensus       158 ~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--  235 (364)
T 3op5_A          158 SLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG--  235 (364)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT--
T ss_pred             HHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC--
Confidence            99999999999999999999999999997  3        8877543322           12337999999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHh-cCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLM-KQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++|||||||++|+|++|..||.+............ ....... ...   ........+++++.+++..||+.||
T Consensus       236 ~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~li~~cl~~~p  311 (364)
T 3op5_A          236 VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIA-SLM---DKCFPAANAPGEIAKYMETVKLLDY  311 (364)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHH-HHH---HHHSCTTCCCHHHHHHHHHHHTCCT
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHH-HHH---HHhcccccCHHHHHHHHHHHhcCCC
Confidence            5689999999999999999999999986433222211111 1000000 000   0000014578999999999999999


Q ss_pred             CCCccHHHHhh
Q 037274          228 AKRPAAEAQVL  238 (245)
Q Consensus       228 ~~Rpt~~~~l~  238 (245)
                      .+||++.++++
T Consensus       312 ~~RP~~~~l~~  322 (364)
T 3op5_A          312 TEKPLYENLRD  322 (364)
T ss_dssp             TCCCCHHHHHH
T ss_pred             CCCCCHHHHHH
Confidence            99999999875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=8.5e-38  Score=247.66  Aligned_cols=194  Identities=18%  Similarity=0.265  Sum_probs=158.8

Q ss_pred             HHHHHHHHHHhhCC--CCCeeeEEEEEEeCceeEEEeeeccc-CCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           12 AKLAREIYRYKHLS--HPNIIPIYKTMISQRQLFYAEIACMI-GSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        12 ~~~~~E~~~l~~l~--h~~Iv~~~~~~~~~~~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      +.+.+|+.++++++  |+||+++++++..++..++++|++.+ ++|.+++..                 ...+++..++.
T Consensus        91 ~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~-----------------~~~l~~~~~~~  153 (320)
T 3a99_A           91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-----------------RGALQEELARS  153 (320)
T ss_dssp             CEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHH-----------------HCSCCHHHHHH
T ss_pred             hHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhc-----------------cCCCCHHHHHH
Confidence            45678999999996  59999999999999999999999975 799776642                 34688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceecc-c--------ccCccccccC--CCCccccccccCceecCCCCCCCchhhH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHN-I--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~-~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      ++.|++.||.|||+.|++|+||||+||+++ .        ||.+......  ....+|+.|+|||.+.+ ....+.++||
T Consensus       154 i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~Di  232 (320)
T 3a99_A          154 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY-HRYHGRSAAV  232 (320)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHH-SCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccCCChHHhcc-CCCCCccchH
Confidence            999999999999999999999999999997 3        7766544322  23457999999999876 2334788999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      ||||+++|+|++|..||....   .   .....       .       .....+++++.+++.+||+.||.+|||+++++
T Consensus       233 ~slG~il~el~~g~~pf~~~~---~---~~~~~-------~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  292 (320)
T 3a99_A          233 WSLGILLYDMVCGDIPFEHDE---E---IIRGQ-------V-------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ  292 (320)
T ss_dssp             HHHHHHHHHHHHSSCSCCSHH---H---HHHCC-------C-------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HhHHHHHHHHHHCCCCCCChh---h---hhccc-------c-------cccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            999999999999999997621   1   11111       0       01155789999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +||||.
T Consensus       293 ~hp~~~  298 (320)
T 3a99_A          293 NHPWMQ  298 (320)
T ss_dssp             TSGGGS
T ss_pred             cCHhhc
Confidence            999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=3.5e-38  Score=245.69  Aligned_cols=195  Identities=17%  Similarity=0.182  Sum_probs=157.0

Q ss_pred             HHHHHHHHHHhhCCCCCeeeEEEEEEe----------------CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhh
Q 037274           12 AKLAREIYRYKHLSHPNIIPIYKTMIS----------------QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN   75 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~~~~~~~~----------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~   75 (245)
                      +.+.+|++++++++||||+++++++..                .+..++||||+++++|.+++..               
T Consensus        49 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------  113 (284)
T 2a19_B           49 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK---------------  113 (284)
T ss_dssp             GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHH---------------
T ss_pred             HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhh---------------
Confidence            457899999999999999999998854                4458999999999999777752               


Q ss_pred             ccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCcee
Q 037274           76 RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVV  144 (245)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~  144 (245)
                      .....+++..++.++.|++.||.|||+.|++|+||||+||+++.        ||.+......   ....+++.|+|||.+
T Consensus       114 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  193 (284)
T 2a19_B          114 RRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQI  193 (284)
T ss_dssp             GGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHH
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccccccCCcccccChhhh
Confidence            12356889999999999999999999999999999999999876        7765544332   234569999999999


Q ss_pred             cCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcC
Q 037274          145 NFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       145 ~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      .+  ..++.++||||||+++|+|++|..|+...  ...........                .+..++..+.+++.+||+
T Consensus       194 ~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~~----------------~~~~~~~~~~~li~~~l~  253 (284)
T 2a19_B          194 SS--QDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDGI----------------ISDIFDKKEKTLLQKLLS  253 (284)
T ss_dssp             HC--SCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTTC----------------CCTTSCHHHHHHHHHHTC
T ss_pred             cc--CCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhccc----------------ccccCCHHHHHHHHHHcc
Confidence            87  56899999999999999999999887531  11111111110                114578899999999999


Q ss_pred             CCCCCCccHHHHhhccc
Q 037274          225 PDPAKRPAAEAQVLQEM  241 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~~~  241 (245)
                      .||.+|||+.+++++.+
T Consensus       254 ~dp~~Rps~~e~l~~l~  270 (284)
T 2a19_B          254 KKPEDRPNTSEILRTLT  270 (284)
T ss_dssp             SSGGGSCCHHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHHH
Confidence            99999999999999865

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.9e-38  Score=257.20  Aligned_cols=217  Identities=20%  Similarity=0.278  Sum_probs=161.5

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc--eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQR--QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +..+.+.+|++++++++||||+++++++...+  ..++||||+++|+|.+++...              .....+++..+
T Consensus        49 ~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--------------~~~~~l~~~~~  114 (396)
T 4eut_A           49 RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP--------------SNAYGLPESEF  114 (396)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSG--------------GGTTCCCHHHH
T ss_pred             chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhh--------------hcccCCCHHHH
Confidence            34677889999999999999999999988755  689999999999998777531              11234899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceec----cc--------ccCccccccC---CCCccccccccCceecCC----
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILH----NI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFG----  147 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~----~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~----  147 (245)
                      +.++.|++.||+|||++|++||||||+||++    +.        ||.+......   ....+|+.|+|||.+.+.    
T Consensus       115 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  194 (396)
T 4eut_A          115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRK  194 (396)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhcccccc
Confidence            9999999999999999999999999999998    32        7777544332   244579999999998631    


Q ss_pred             --CCCCCchhhHHHHHHHHHHHhhCCCCCCCCC----chHHHHHHHhcCCCCccCCCC-----------CCCCCCCCccc
Q 037274          148 --DDYYSCKSDIWLIGITALQFPCGGLPVSRRQ----DLDIMTKMLMKQPKSTSLQVA-----------PNEDTTHGTRT  210 (245)
Q Consensus       148 --~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~  210 (245)
                        ...++.++|||||||++|+|++|+.||....    ....+..+....+........           ........+..
T Consensus       195 ~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  274 (396)
T 4eut_A          195 DHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRG  274 (396)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHH
T ss_pred             ccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchH
Confidence              0246789999999999999999999997532    233444444332211100000           00011122245


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ++..+.+++.+||+.||++||++.+++++
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          275 LQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             HHhhchHHHHHhhccChhhhccHHHHHHH
Confidence            67789999999999999999999998653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-37  Score=248.09  Aligned_cols=202  Identities=18%  Similarity=0.221  Sum_probs=148.9

Q ss_pred             HHHHHHHHHHhh--CCCCCeeeEEEEEEeC----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274           12 AKLAREIYRYKH--LSHPNIIPIYKTMISQ----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus        12 ~~~~~E~~~l~~--l~h~~Iv~~~~~~~~~----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .....|.+++..  ++||||+++++++...    +..++||||+++|+|.++++.                  ..+++..
T Consensus        74 ~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~------------------~~~~~~~  135 (337)
T 3mdy_A           74 ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS------------------TTLDAKS  135 (337)
T ss_dssp             HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH------------------CCBCHHH
T ss_pred             chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc------------------cCCCHHH
Confidence            344555555554  4899999999999877    679999999999999777752                  3588999


Q ss_pred             HHHHHHHHHHHHHHHHhC--------CcccccCCCCceeccc--------ccCccccccCC--------CCccccccccC
Q 037274           86 LAIAHKETLKGLSYLQGE--------GLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAAAP  141 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~--------~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~aP  141 (245)
                      ++.++.|++.||.|||+.        |++||||||+||+++.        ||.+.......        ...+|+.|+||
T Consensus       136 ~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  215 (337)
T 3mdy_A          136 MLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP  215 (337)
T ss_dssp             HHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeCh
Confidence            999999999999999999        9999999999999975        77765433222        33579999999


Q ss_pred             ceecCCCCCCCc------hhhHHHHHHHHHHHhhC----------CCCCCCCCc----hHHHHHHHhcCCCCccCCCCCC
Q 037274          142 EVVNFGDDYYSC------KSDIWLIGITALQFPCG----------GLPVSRRQD----LDIMTKMLMKQPKSTSLQVAPN  201 (245)
Q Consensus       142 E~~~~~~~~~~~------~~DvwslG~~l~~~~~g----------~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  201 (245)
                      |.+.+  ...+.      ++|||||||++|+|++|          ..||.....    ...........      ...+.
T Consensus       216 E~~~~--~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~  287 (337)
T 3mdy_A          216 EVLDE--SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIK------KLRPS  287 (337)
T ss_dssp             HHHTT--CCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS------CCCCC
T ss_pred             hhccc--ccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhh------ccCcc
Confidence            99986  22333      49999999999999999          667754322    12222222111      01111


Q ss_pred             CCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          202 EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       202 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      .........+++++.+++.+||+.||.+|||+.+++++
T Consensus       288 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          288 FPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            11111124567889999999999999999999999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.9e-37  Score=245.24  Aligned_cols=207  Identities=16%  Similarity=0.243  Sum_probs=158.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      .....+.+.+|+.++++++||||+++++++..    .+..++|+||+++|+|.+++..           .  ......++
T Consensus        66 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----------~--~~~~~~~~  132 (317)
T 2buj_A           66 EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIER-----------L--KDKGNFLT  132 (317)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHH-----------H--HTTTCCCC
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHH-----------H--HhcCCCCC
Confidence            45677889999999999999999999999863    3478999999999999887752           1  11245689


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------------CCccccccccC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------------SSSITTWAAAP  141 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------------~~~~~~~y~aP  141 (245)
                      +..++.++.|++.||.|||+.|++|+||||+||+++.        ||.+.......             ...+++.|+||
T Consensus       133 ~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  212 (317)
T 2buj_A          133 EDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP  212 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCG
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCH
Confidence            9999999999999999999999999999999999976        55443322110             12348899999


Q ss_pred             ceecCCC-CCCCchhhHHHHHHHHHHHhhCCCCCCCCCc--hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHH
Q 037274          142 EVVNFGD-DYYSCKSDIWLIGITALQFPCGGLPVSRRQD--LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM  218 (245)
Q Consensus       142 E~~~~~~-~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  218 (245)
                      |.+.+.. ..++.++||||||+++|+|++|..||.....  ........ ..   .  ..+       ....+++++.++
T Consensus       213 E~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~---~--~~~-------~~~~~~~~l~~l  279 (317)
T 2buj_A          213 ELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ-NQ---L--SIP-------QSPRHSSALWQL  279 (317)
T ss_dssp             GGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH-CC-------CC-------CCTTSCHHHHHH
T ss_pred             hHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh-cc---C--CCC-------ccccCCHHHHHH
Confidence            9987521 2368899999999999999999999954111  11111111 11   0  111       114578899999


Q ss_pred             HHHhcCCCCCCCccHHHHhhc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      +.+||+.||.+|||+.+++++
T Consensus       280 i~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          280 LNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhhcChhhCCCHHHHHHH
Confidence            999999999999999999875

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=246.06  Aligned_cols=196  Identities=19%  Similarity=0.303  Sum_probs=154.2

Q ss_pred             HHHHHHHHHHHHhhC----CCCCeeeEEEEEEeCceeEEEeee-cccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274           10 EYAKLAREIYRYKHL----SHPNIIPIYKTMISQRQLFYAEIA-CMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l----~h~~Iv~~~~~~~~~~~~~lv~e~-~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ....+.+|+.+++++    +|+||+++++++...+..++++|+ +.+++|.+++..                 ...+++.
T Consensus        77 ~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~-----------------~~~~~~~  139 (312)
T 2iwi_A           77 DSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-----------------KGPLGEG  139 (312)
T ss_dssp             --CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHH-----------------HCSCCHH
T ss_pred             hhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHh-----------------cCCCCHH
Confidence            345567899999999    899999999999988999999999 788999777652                 2458899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceecc-c--------ccCccccccC--CCCccccccccCceecCCCCCCCc
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-I--------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~-~--------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .++.++.|++.||.|||+.|++|+||||+||+++ .        ||.+......  ....+++.|+|||.+.+ ....+.
T Consensus       140 ~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~  218 (312)
T 2iwi_A          140 PSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISR-HQYHAL  218 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHH-SCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeec-CCCCCc
Confidence            9999999999999999999999999999999997 3        6665543322  23456899999999876 223356


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++||||||+++|+|++|+.||....   .   .....       .       .....++..+.++|.+||+.||.+|||+
T Consensus       219 ~~Di~slG~il~~l~~g~~pf~~~~---~---~~~~~-------~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~  278 (312)
T 2iwi_A          219 PATVWSLGILLYDMVCGDIPFERDQ---E---ILEAE-------L-------HFPAHVSPDCCALIRRCLAPKPSSRPSL  278 (312)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCSHH---H---HHHTC-------C-------CCCTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             cchHHHHHHHHHHHHHCCCCCCChH---H---Hhhhc-------c-------CCcccCCHHHHHHHHHHccCChhhCcCH
Confidence            8999999999999999999997621   1   11111       0       1115578899999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      +++++||||.
T Consensus       279 ~e~l~~~~~~  288 (312)
T 2iwi_A          279 EEILLDPWMQ  288 (312)
T ss_dssp             HHHHHSTTTC
T ss_pred             HHHhcChhhc
Confidence            9999999996

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=3.5e-38  Score=247.08  Aligned_cols=204  Identities=12%  Similarity=0.116  Sum_probs=155.2

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEE-EeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTM-ISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .....+.+.+|+.++++++|++++..++.+ ...+..+++||++ +++|.+++..                ....+++..
T Consensus        44 ~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~----------------~~~~~~~~~  106 (296)
T 4hgt_A           44 VKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF----------------CSRKFSLKT  106 (296)
T ss_dssp             C---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH----------------TTSCCCHHH
T ss_pred             ccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHH----------------hcCCCCHHH
Confidence            344556789999999999988877666665 5677789999999 8899777652                134589999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceec---cc--------ccCccccccC-----------CCCccccccccCce
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILH---NI--------FNDDTRNWIS-----------SSSSITTWAAAPEV  143 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~---~~--------f~~~~~~~~~-----------~~~~~~~~y~aPE~  143 (245)
                      +..++.|++.||.|||+.|++|+||||+||++   +.        ||.+......           ....+|+.|+|||.
T Consensus       107 ~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  186 (296)
T 4hgt_A          107 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT  186 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHH
Confidence            99999999999999999999999999999999   33        7776544332           23456999999999


Q ss_pred             ecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCch---HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHH
Q 037274          144 VNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL---DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       144 ~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  220 (245)
                      +.+  ..++.++||||||+++|+|++|..||......   ...........     ..+    .......+++++.+++.
T Consensus       187 ~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~l~~li~  255 (296)
T 4hgt_A          187 HLG--IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-----STP----IEVLCKGYPSEFATYLN  255 (296)
T ss_dssp             HTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-----HSC----HHHHTTTSCHHHHHHHH
T ss_pred             hcC--CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc-----cch----hhhhhccCCHHHHHHHH
Confidence            987  56899999999999999999999999864332   22222211110     000    00011456889999999


Q ss_pred             HhcCCCCCCCccHHHHhh
Q 037274          221 ICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~  238 (245)
                      .||+.||.+|||++++++
T Consensus       256 ~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          256 FCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHTSCTTCCCCHHHHHH
T ss_pred             HHHhcCCCCCCCHHHHHH
Confidence            999999999999999876

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=2e-37  Score=242.79  Aligned_cols=201  Identities=12%  Similarity=0.114  Sum_probs=154.9

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEE-EeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTM-ISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      .+.+.+|+.+++.++|++++..+..+ ..++..++|+|++ +++|.+++..                ....+++..++.+
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~----------------~~~~~~~~~~~~i  110 (296)
T 3uzp_A           48 HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNF----------------CSRKFSLKTVLLL  110 (296)
T ss_dssp             CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH----------------TTTCCCHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHh----------------hccCCCHHHHHHH
Confidence            35689999999999988877666555 5667789999999 8899777752                1346899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceecc---c--------ccCccccccC-----------CCCccccccccCceecCC
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHN---I--------FNDDTRNWIS-----------SSSSITTWAAAPEVVNFG  147 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~---~--------f~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~  147 (245)
                      +.|++.||.|||++|++|+||||+||+++   .        ||.+......           ....+|+.|+|||.+.+ 
T Consensus       111 ~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  189 (296)
T 3uzp_A          111 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG-  189 (296)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTT-
T ss_pred             HHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcC-
Confidence            99999999999999999999999999994   2        7776544332           23456999999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCc---hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcC
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQD---LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                       ..++.++||||||+++|+|++|+.||.....   ......+.....     ..+    .......+++++.+++..||+
T Consensus       190 -~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~l~~li~~~l~  259 (296)
T 3uzp_A          190 -IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-----STP----IEVLCKGYPSEFATYLNFCRS  259 (296)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-----HSC----HHHHTTTSCHHHHHHHHHHHT
T ss_pred             -CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc-----CCc----hHHHHhhCCHHHHHHHHHHHh
Confidence             5689999999999999999999999986432   222222222110     000    000114578899999999999


Q ss_pred             CCCCCCccHHHHhhc
Q 037274          225 PDPAKRPAAEAQVLQ  239 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~  239 (245)
                      .||.+|||++++++.
T Consensus       260 ~dp~~Rps~~~l~~~  274 (296)
T 3uzp_A          260 LRFDDKPDYSYLRQL  274 (296)
T ss_dssp             SCTTCCCCHHHHHHH
T ss_pred             cCcCcCCCHHHHHHH
Confidence            999999999998753

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.5e-37  Score=248.07  Aligned_cols=205  Identities=16%  Similarity=0.094  Sum_probs=157.0

Q ss_pred             HHHHHHHHHHhhCCCCCeee---------------EEEEEEe-CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhh
Q 037274           12 AKLAREIYRYKHLSHPNIIP---------------IYKTMIS-QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN   75 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~Iv~---------------~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~   75 (245)
                      +.+.+|++++++++||||++               +++++.. ++..++||||+ +++|.+++...              
T Consensus        87 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--------------  151 (352)
T 2jii_A           87 GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--------------  151 (352)
T ss_dssp             STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--------------
T ss_pred             chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--------------
Confidence            46889999999999999987               6777765 67899999999 88998777531              


Q ss_pred             ccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccC-----------CCCcc
Q 037274           76 RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWIS-----------SSSSI  134 (245)
Q Consensus        76 ~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~-----------~~~~~  134 (245)
                       ....+++..++.++.|++.||.|||++|++||||||+||+++.          ||++......           ....+
T Consensus       152 -~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g  230 (352)
T 2jii_A          152 -PKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEG  230 (352)
T ss_dssp             -GGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCS
T ss_pred             -CcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccC
Confidence             1356899999999999999999999999999999999999975          6666443221           22367


Q ss_pred             ccccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCC-chHHHHHHHhcCCCCccCCCCCCCCCCCCcccccH
Q 037274          135 TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQ-DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSK  213 (245)
Q Consensus       135 ~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (245)
                      |+.|+|||.+.+  ..++.++||||||+++|+|++|..||.... ...............    .............+++
T Consensus       231 t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  304 (352)
T 2jii_A          231 DLEFISMDLHKG--CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDK----PGPFVGPCGHWIRPSE  304 (352)
T ss_dssp             CTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHS----CCCEECTTSCEECCCH
T ss_pred             CccccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCC----hhhhhhhccccCCCcH
Confidence            999999999987  568999999999999999999999998754 222222222111000    0000000111145789


Q ss_pred             HHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          214 NFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       214 ~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      ++.+++.+||+.||.+|||++++++
T Consensus       305 ~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          305 TLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHHhCChhhCCCHHHHHH
Confidence            9999999999999999999999865

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=5.7e-37  Score=240.73  Aligned_cols=199  Identities=16%  Similarity=0.165  Sum_probs=145.1

Q ss_pred             HHHHHHHHHH-hhCCCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274           12 AKLAREIYRY-KHLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus        12 ~~~~~E~~~l-~~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+.+|+.++ +.++||||+++++++..    ++..++||||+++|+|.+++..               .....+++..+
T Consensus        55 ~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------------~~~~~~~~~~~  119 (299)
T 3m2w_A           55 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA  119 (299)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHH---------------CTTCCCBHHHH
T ss_pred             HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHh---------------ccCCCCCHHHH
Confidence            4577899887 66689999999999877    6679999999999999776652               22346899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceecccc---cCccccccCCCCccccccccCceecCCCCCCCchhhHHHHHHH
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF---NDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGIT  163 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~f---~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~  163 (245)
                      +.++.|++.||.|||+.|++|+||||+||+++.-   +..+....+          ..+...+  ..++.++|||||||+
T Consensus       120 ~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg----------~a~~~~~--~~~~~~~DiwslG~i  187 (299)
T 3m2w_A          120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG----------FAKETTG--EKYDKSCDMWSLGVI  187 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCT----------TCEECTT--CGGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccc----------ccccccc--ccCCchhhHHHHHHH
Confidence            9999999999999999999999999999998752   111111111          1122223  558899999999999


Q ss_pred             HHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       164 l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +|+|++|..||................      ..............+++++.+++.+||+.||.+|||++++++||||.
T Consensus       188 l~el~tg~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~  261 (299)
T 3m2w_A          188 MYILLCGYPPFYSNHGLAISPGMKTRI------RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  261 (299)
T ss_dssp             HHHHHHSSCSCCC-------CCSCCSS------CTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHHHHCCCCCCCCcchhhhHHHHHHH------hhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhc
Confidence            999999999998744332211100000      00011111111145789999999999999999999999999999985

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.9e-37  Score=242.72  Aligned_cols=205  Identities=19%  Similarity=0.204  Sum_probs=157.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc--eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR--QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ..+..+.+.+|+.++++++||||+++++++...+  ..++|+|++++++|.+++..                ....+++.
T Consensus        82 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------------~~~~~~~~  145 (326)
T 2w1i_A           82 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK----------------HKERIDHI  145 (326)
T ss_dssp             CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHH----------------STTSSCHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHh----------------cccCCCHH
Confidence            4556788999999999999999999999986644  68999999999999877753                12458899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~  149 (245)
                      .++.++.|++.||.+||+.|++|+||||+||+++.        ||.+.......       ...++..|+|||.+.+  .
T Consensus       146 ~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~  223 (326)
T 2w1i_A          146 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE--S  223 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHH--C
T ss_pred             HHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcC--C
Confidence            99999999999999999999999999999999975        77665443221       2334778999999987  5


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCch------------HHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHH
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDL------------DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWN  217 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (245)
                      .++.++||||||+++|+|++|..||......            .....+........  ..       ..+..+++++.+
T Consensus       224 ~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~l~~  294 (326)
T 2w1i_A          224 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG--RL-------PRPDGCPDEIYM  294 (326)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC--CC-------CCCTTCCHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCC--CC-------CCCCcccHHHHH
Confidence            6889999999999999999999988642110            00001111100000  00       112567899999


Q ss_pred             HHHHhcCCCCCCCccHHHHhh
Q 037274          218 MVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       218 li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      +|.+||+.||.+|||+.++++
T Consensus       295 li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          295 IMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.5e-36  Score=241.90  Aligned_cols=202  Identities=19%  Similarity=0.299  Sum_probs=141.9

Q ss_pred             cHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEE--------eCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhcc
Q 037274            7 QAEEYAKLAREIYRYKHLS-HPNIIPIYKTMI--------SQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRH   77 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~--------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~   77 (245)
                      .....+.+.+|+.+++++. ||||+++++++.        .....++++|++. |+|.+++..              ...
T Consensus        65 ~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~--------------~~~  129 (337)
T 3ll6_A           65 EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKK--------------MES  129 (337)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHH--------------HHT
T ss_pred             chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHH--------------hhc
Confidence            4566778999999999996 999999999984        3345899999997 588776642              112


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHhCC--cccccCCCCceeccc--------ccCccccccCC----------------C
Q 037274           78 RYGITVDCLAIAHKETLKGLSYLQGEG--LFHKNISAGHILHNI--------FNDDTRNWISS----------------S  131 (245)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lh~~~--ivH~dlkp~nil~~~--------f~~~~~~~~~~----------------~  131 (245)
                      ...+++..++.++.|++.||.|||+.|  ++|+||||+||+++.        ||.+.......                .
T Consensus       130 ~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (337)
T 3ll6_A          130 RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT  209 (337)
T ss_dssp             TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-----------------
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhcc
Confidence            356899999999999999999999999  999999999999976        67665443221                2


Q ss_pred             CccccccccCceecC-CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCccc
Q 037274          132 SSITTWAAAPEVVNF-GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRT  210 (245)
Q Consensus       132 ~~~~~~y~aPE~~~~-~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (245)
                      ..+|+.|+|||.+.. ....++.++||||||+++|+|++|..||.............         ..       .....
T Consensus       210 ~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---------~~-------~~~~~  273 (337)
T 3ll6_A          210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKY---------SI-------PPHDT  273 (337)
T ss_dssp             --------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------C---------CC-------CTTCC
T ss_pred             ccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCcc---------cC-------Ccccc
Confidence            346899999999842 12568899999999999999999999997644322211100         11       11145


Q ss_pred             ccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       211 ~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      .+..+.+++.+||+.||.+|||+.+++++
T Consensus       274 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          274 QYTVFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             SSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             cchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            66789999999999999999999999876

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.8e-36  Score=242.12  Aligned_cols=206  Identities=20%  Similarity=0.195  Sum_probs=155.4

Q ss_pred             HHHHHHHHHHHHhh--CCCCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           10 EYAKLAREIYRYKH--LSHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        10 ~~~~~~~E~~~l~~--l~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ..+.+.+|+++++.  ++||||+++++++...+    ..++|+||+++|+|.+++..                  ..+++
T Consensus        77 ~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~------------------~~~~~  138 (342)
T 1b6c_B           77 EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------------------YTVTV  138 (342)
T ss_dssp             GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH------------------CCBCH
T ss_pred             hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc------------------cCccH
Confidence            34667889998887  78999999999998775    78999999999999777752                  35889


Q ss_pred             HHHHHHHHHHHHHHHHHH--------hCCcccccCCCCceeccc--------ccCccccccC--------CCCccccccc
Q 037274           84 DCLAIAHKETLKGLSYLQ--------GEGLFHKNISAGHILHNI--------FNDDTRNWIS--------SSSSITTWAA  139 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh--------~~~ivH~dlkp~nil~~~--------f~~~~~~~~~--------~~~~~~~~y~  139 (245)
                      ..++.++.|++.||.|||        +.|++|+||||+||+++.        ||.+......        ....+|+.|+
T Consensus       139 ~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~  218 (342)
T 1b6c_B          139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM  218 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccC
Confidence            999999999999999999        899999999999999975        7766544332        2335799999


Q ss_pred             cCceecCCCC----CCCchhhHHHHHHHHHHHhhC----------CCCCCCCCch----HHHHHHHhcCCCCccCCCCCC
Q 037274          140 APEVVNFGDD----YYSCKSDIWLIGITALQFPCG----------GLPVSRRQDL----DIMTKMLMKQPKSTSLQVAPN  201 (245)
Q Consensus       140 aPE~~~~~~~----~~~~~~DvwslG~~l~~~~~g----------~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  201 (245)
                      |||.+.+...    .++.++||||||+++|+|++|          ..||......    ..........  ......   
T Consensus       219 aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~---  293 (342)
T 1b6c_B          219 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ--KLRPNI---  293 (342)
T ss_dssp             CHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS--CCCCCC---
T ss_pred             CHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHH--HhCCCC---
Confidence            9999986211    233789999999999999999          7788764321    2222221111  000000   


Q ss_pred             CCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          202 EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       202 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                       .........+..+.+++.+||+.||.+|||+.+++++
T Consensus       294 -~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          294 -PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             -CGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             -cccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence             0011124556789999999999999999999999875

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.6e-37  Score=266.26  Aligned_cols=196  Identities=18%  Similarity=0.140  Sum_probs=160.5

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCce-----eEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ-----LFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~-----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      ...+..+.+.+|++++++++||||+++++++...+.     .|+||||+++++|.+++.                   ..
T Consensus       118 ~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~-------------------~~  178 (681)
T 2pzi_A          118 GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG-------------------QK  178 (681)
T ss_dssp             CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC-----------------------CC
T ss_pred             CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHh-------------------CC
Confidence            345677789999999999999999999999987655     799999999999955432                   26


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc-------ccCccccccCCCCccccccccCceecCCCCCCCc
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      +++..+..++.||+.||.|||++||+||||||+||+++.       ||++..........+|+.|+|||.+.+  . .+.
T Consensus       179 l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~--~-~~~  255 (681)
T 2pzi_A          179 LPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRT--G-PTV  255 (681)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCCSCCCCCTTTSCTTHHHH--C-SCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccCCccCCCccccCHHHHcC--C-CCC
Confidence            889999999999999999999999999999999999876       888877666666778999999999875  2 389


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++|||||||++|+|++|..||.+....                ..+    ........++.+.++|.+||+.||.+||+.
T Consensus       256 ~sDi~slG~~l~~l~~g~~~~~~~~~~----------------~~~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~  315 (681)
T 2pzi_A          256 ATDIYTVGRTLAALTLDLPTRNGRYVD----------------GLP----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTT  315 (681)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEETTEECS----------------SCC----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSS
T ss_pred             ceehhhhHHHHHHHHhCCCCCcccccc----------------ccc----ccccccccCHHHHHHHhhhccCChhhCCCH
Confidence            999999999999999999887752110                000    001113356789999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      .+.+.++|+.
T Consensus       316 ~~~l~~~l~~  325 (681)
T 2pzi_A          316 AEEMSAQLTG  325 (681)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9998888764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.8e-36  Score=236.23  Aligned_cols=188  Identities=10%  Similarity=0.001  Sum_probs=145.1

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+..+.+.+|+.++++++||||+++++++..++..|+||||+++++|.++++.                  . .....+.
T Consensus        72 ~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~------------------~-~~~~~~~  132 (286)
T 3uqc_A           72 DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT------------------S-PSPVGAI  132 (286)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT------------------C-CCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc------------------C-CChHHHH
Confidence            56678899999999999999999999999999999999999999999777642                  1 2344677


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceecccccCccccccCCCCccccccccCceecCCCCCCCchhhHHHHHHHHHHH
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQF  167 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~  167 (245)
                      .++.|++.||.|||++|++||||||+||+++..|..+.        +++.|++|         ++.++||||||+++|+|
T Consensus       133 ~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl--------~~~~~~~~---------~~~~~Di~slG~il~el  195 (286)
T 3uqc_A          133 RAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVL--------AYPATMPD---------ANPQDDIRGIGASLYAL  195 (286)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEE--------CSCCCCTT---------CCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEE--------EeccccCC---------CCchhHHHHHHHHHHHH
Confidence            89999999999999999999999999999986554332        24445443         78999999999999999


Q ss_pred             hhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       168 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      ++|+.||.+.+............      .. ...........+++++.+++.+||+.||.+| |++++++.
T Consensus       196 ltg~~Pf~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          196 LVNRWPLPEAGVRSGLAPAERDT------AG-QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             HHSEECSCCCSBCCCSEECCBCT------TS-CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             HHCCCCCCcCCcchhhHHHHHHh------cc-CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence            99999998855432110000000      00 0000011125678999999999999999999 99998763

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.3e-36  Score=242.45  Aligned_cols=201  Identities=15%  Similarity=0.147  Sum_probs=143.6

Q ss_pred             HHHHHHHhhCCCCCeeeEEEEEEe-----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           15 AREIYRYKHLSHPNIIPIYKTMIS-----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        15 ~~E~~~l~~l~h~~Iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..|+..+..++||||+++++.+..     ....++||||+++|+|.+++..                  ...++..+..+
T Consensus        55 e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~------------------~~~~~~~~~~i  116 (336)
T 3g2f_A           55 EKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL------------------HTSDWVSSCRL  116 (336)
T ss_dssp             HHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHH------------------CCBCHHHHHHH
T ss_pred             HHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhh------------------cccchhHHHHH
Confidence            344444556899999999986542     2357999999999999877752                  33578888999


Q ss_pred             HHHHHHHHHHHHhC---------CcccccCCCCceeccc--------ccCccccccC------------CCCcccccccc
Q 037274           90 HKETLKGLSYLQGE---------GLFHKNISAGHILHNI--------FNDDTRNWIS------------SSSSITTWAAA  140 (245)
Q Consensus        90 ~~qi~~~l~~lh~~---------~ivH~dlkp~nil~~~--------f~~~~~~~~~------------~~~~~~~~y~a  140 (245)
                      +.|++.||.|||+.         |++||||||+|||++.        ||++......            ....+|+.|+|
T Consensus       117 ~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  196 (336)
T 3g2f_A          117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA  196 (336)
T ss_dssp             HHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCC
T ss_pred             HHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeC
Confidence            99999999999999         9999999999999986        7776543321            13357999999


Q ss_pred             CceecCCC-----CCCCchhhHHHHHHHHHHHhhCCCCCCCCCchH-----------------HHHHHHhcCCCCccCCC
Q 037274          141 PEVVNFGD-----DYYSCKSDIWLIGITALQFPCGGLPVSRRQDLD-----------------IMTKMLMKQPKSTSLQV  198 (245)
Q Consensus       141 PE~~~~~~-----~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~-----------------~~~~~~~~~~~~~~~~~  198 (245)
                      ||.+.+..     ..++.++|||||||++|+|++|..||.......                 ..........  .   .
T Consensus       197 PE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~  271 (336)
T 3g2f_A          197 PEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREK--Q---R  271 (336)
T ss_dssp             HHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSC--C---C
T ss_pred             chhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccc--c---C
Confidence            99997521     235578999999999999999977765422211                 1111111110  0   0


Q ss_pred             CCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhh
Q 037274          199 APNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~  238 (245)
                      +............++++.++|.+||+.||.+|||+.++++
T Consensus       272 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          272 PKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             CCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence            1111111112346678999999999999999999999854

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.1e-36  Score=252.67  Aligned_cols=201  Identities=13%  Similarity=0.112  Sum_probs=155.7

Q ss_pred             HHHHHHHHHHHHhhCCC-CCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSH-PNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h-~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+++..|+++++.|+| ++|..+..++...+..++||||+ +++|.+++..                ....+++..++.
T Consensus        45 ~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~----------------~~~~l~~~~~~~  107 (483)
T 3sv0_A           45 KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF----------------CSRKLSLKTVLM  107 (483)
T ss_dssp             SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH----------------TTTCCCHHHHHH
T ss_pred             ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHh----------------hcCCCCHHHHHH
Confidence            34568899999999987 55556666667788899999999 8899887752                134689999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceecc---c--------ccCccccccCC-----------CCccccccccCceecC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHN---I--------FNDDTRNWISS-----------SSSITTWAAAPEVVNF  146 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~---~--------f~~~~~~~~~~-----------~~~~~~~y~aPE~~~~  146 (245)
                      ++.||+.||.|||++||+||||||+|||++   .        ||++.......           ...+|+.|+|||.+.+
T Consensus       108 i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~  187 (483)
T 3sv0_A          108 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLG  187 (483)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcC
Confidence            999999999999999999999999999994   2        88776544322           4457999999999987


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHH---HHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhc
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDI---MTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL  223 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  223 (245)
                        ..++.++|||||||++|+|++|..||.+......   +..+........         .......+++++.+++..||
T Consensus       188 --~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~---------~~~l~~~~p~~l~~li~~cl  256 (483)
T 3sv0_A          188 --IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATS---------IEALCRGYPTEFASYFHYCR  256 (483)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSC---------HHHHHTTSCHHHHHHHHHHH
T ss_pred             --CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccccc---------HHHHhcCCcHHHHHHHHHHh
Confidence              6689999999999999999999999987544322   222211110000         00111456889999999999


Q ss_pred             CCCCCCCccHHHHhh
Q 037274          224 APDPAKRPAAEAQVL  238 (245)
Q Consensus       224 ~~~p~~Rpt~~~~l~  238 (245)
                      +.+|.+||+++++++
T Consensus       257 ~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          257 SLRFDDKPDYSYLKR  271 (483)
T ss_dssp             TCCTTCCCCHHHHHH
T ss_pred             cCChhhCcCHHHHHH
Confidence            999999999998765

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=2.6e-36  Score=243.23  Aligned_cols=198  Identities=9%  Similarity=0.013  Sum_probs=154.4

Q ss_pred             HHHHHHHHHHHHhhCC---CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274           10 EYAKLAREIYRYKHLS---HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~---h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ....+..|+++++.++   |+||+++++++..++..++||||+++|+|.+++...            .......+++..+
T Consensus       107 ~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~------------~~~~~~~l~~~~~  174 (365)
T 3e7e_A          107 NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLY------------KNTPEKVMPQGLV  174 (365)
T ss_dssp             CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHH------------HTSTTCSCCHHHH
T ss_pred             ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHh------------hcccccCCCHHHH
Confidence            3456788888888887   999999999999999999999999999998877520            1112456999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc-------------------ccCccccc------cCCCCccccccccC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------------------FNDDTRNW------ISSSSSITTWAAAP  141 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------------------f~~~~~~~------~~~~~~~~~~y~aP  141 (245)
                      +.++.|++.||+|||+.||+||||||+|||++.                   ||++....      ......||+.|+||
T Consensus       175 ~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP  254 (365)
T 3e7e_A          175 ISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCV  254 (365)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCH
T ss_pred             HHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCCh
Confidence            999999999999999999999999999999942                   77774332      12245679999999


Q ss_pred             ceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHH
Q 037274          142 EVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       142 E~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  221 (245)
                      |++.+  ..++.++|||||||++|+|++|+.||........            .......      ....++.+.+++..
T Consensus       255 E~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------------~~~~~~~------~~~~~~~~~~~~~~  314 (365)
T 3e7e_A          255 EMLSN--KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------------KPEGLFR------RLPHLDMWNEFFHV  314 (365)
T ss_dssp             HHHTT--CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE------------EECSCCT------TCSSHHHHHHHHHH
T ss_pred             HHhcC--CCCCccccHHHHHHHHHHHHhCCCccccCCCCce------------eechhcc------ccCcHHHHHHHHHH
Confidence            99987  5589999999999999999999999965322110            0000000      02346788999999


Q ss_pred             hcCCCCCCCccHHHHhhc
Q 037274          222 CLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~~  239 (245)
                      |++.+|.+|++..+.+.+
T Consensus       315 ~l~~~p~~r~~~~~~l~~  332 (365)
T 3e7e_A          315 MLNIPDCHHLPSLDLLRQ  332 (365)
T ss_dssp             HHCCCCTTCCCCHHHHHH
T ss_pred             HcCCCCCCcchHHHHHHH
Confidence            999999999765554443

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=5e-36  Score=245.10  Aligned_cols=205  Identities=15%  Similarity=0.180  Sum_probs=147.5

Q ss_pred             HHHHHHHHHHHHHhhCCC-CCe----------ee-----------EEEEEEe-----CceeEEEeeecccCCHHHHHhcC
Q 037274            9 EEYAKLAREIYRYKHLSH-PNI----------IP-----------IYKTMIS-----QRQLFYAEIACMIGSLDSIMTYR   61 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h-~~I----------v~-----------~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~   61 (245)
                      +..+.+.+|+.+++.++| +|+          +.           +..++..     ....+++++.+ +++|.++++. 
T Consensus       120 ~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~-  197 (413)
T 3dzo_A          120 NAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEV-  197 (413)
T ss_dssp             -CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHH-
Confidence            346789999999999987 221          11           1111111     12356677665 4699888752 


Q ss_pred             CCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-CCC
Q 037274           62 PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-SSS  132 (245)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~~~  132 (245)
                               ..........+++..+..++.|++.||+|||++||+||||||+|||++.        ||++...... ...
T Consensus       198 ---------l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~  268 (413)
T 3dzo_A          198 ---------LLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSP  268 (413)
T ss_dssp             ---------HHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCC
T ss_pred             ---------hhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCccccC
Confidence                     1111112345778899999999999999999999999999999999976        7776544333 234


Q ss_pred             ccccccccCceecC--------CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCC
Q 037274          133 SITTWAAAPEVVNF--------GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDT  204 (245)
Q Consensus       133 ~~~~~y~aPE~~~~--------~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (245)
                      .+ +.|+|||.+..        ....++.++|||||||++|+|++|+.||...+.......+.                 
T Consensus       269 ~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~-----------------  330 (413)
T 3dzo_A          269 IG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF-----------------  330 (413)
T ss_dssp             CC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGG-----------------
T ss_pred             CC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHH-----------------
Confidence            55 99999999932        12457889999999999999999999998754332211110                 


Q ss_pred             CCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          205 THGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       205 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                       .....+++++.++|.+||+.||.+|||+.++++||||+
T Consensus       331 -~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~  368 (413)
T 3dzo_A          331 -RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE  368 (413)
T ss_dssp             -SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             -hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHH
Confidence             01145789999999999999999999999999999985

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.1e-35  Score=237.01  Aligned_cols=200  Identities=13%  Similarity=0.051  Sum_probs=146.0

Q ss_pred             HHHHHHHHHHHHhhCC---------CCCeeeEEEEEE------------------------------eCceeEEEeeecc
Q 037274           10 EYAKLAREIYRYKHLS---------HPNIIPIYKTMI------------------------------SQRQLFYAEIACM   50 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~---------h~~Iv~~~~~~~------------------------------~~~~~~lv~e~~~   50 (245)
                      ..+.+.+|+.+++.++         ||||+++.+.+.                              .++..++||||++
T Consensus        66 ~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~  145 (336)
T 2vuw_A           66 TFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEF  145 (336)
T ss_dssp             CHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecC
Confidence            4477889999988885         777777777643                              1678999999999


Q ss_pred             cCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHHHHHHHHH-hCCcccccCCCCceeccc----------
Q 037274           51 IGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQ-GEGLFHKNISAGHILHNI----------  119 (245)
Q Consensus        51 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh-~~~ivH~dlkp~nil~~~----------  119 (245)
                      +|++.+.+.                  +..+++..++.++.||+.||.||| +.||+||||||+|||++.          
T Consensus       146 ~g~ll~~~~------------------~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~  207 (336)
T 2vuw_A          146 GGIDLEQMR------------------TKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTL  207 (336)
T ss_dssp             CCEETGGGT------------------TTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEE
T ss_pred             CCccHHHHH------------------hcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeec
Confidence            997633222                  245789999999999999999999 999999999999999863          


Q ss_pred             ------------------ccCccccccCCCCccccccccCceecCCCCCCCchhhHHHHHHH-HHHHhhCCCCCCCCCc-
Q 037274          120 ------------------FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGIT-ALQFPCGGLPVSRRQD-  179 (245)
Q Consensus       120 ------------------f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~-l~~~~~g~~p~~~~~~-  179 (245)
                                        ||+++.... ....||+.|+|||++.+  .. +.++||||||++ .+++++|..||..... 
T Consensus       208 ~~~~~~~~~~~~~vkL~DFG~a~~~~~-~~~~gt~~y~aPE~~~g--~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~  283 (336)
T 2vuw_A          208 NGKSSTIPSCGLQVSIIDYTLSRLERD-GIVVFCDVSMDEDLFTG--DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL  283 (336)
T ss_dssp             TTEEEEEECTTEEEEECCCTTCBEEET-TEEECCCCTTCSGGGCC--CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH
T ss_pred             cCccccccCCCceEEEeeccccEecCC-CcEEEeecccChhhhcC--CC-ccceehhhhhCCCCcccccccCCCcchhhh
Confidence                              555554332 24467999999999986  33 899999998776 7778889999854111 


Q ss_pred             hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh-hccccc
Q 037274          180 LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV-LQEMWH  243 (245)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l-~~~~f~  243 (245)
                      ......+.......    ..   ........+++++.+||++||+.|     |+++++ +||||+
T Consensus       284 ~~~~~~~~~~~~~~----~~---~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          284 HYLTDKMLKQMTFK----TK---CNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHHHTCCCS----SC---CCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             hHHHHhhhhhhccC----cc---cchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            01112222111110    00   001112457889999999999976     999999 999995

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.97  E-value=4.7e-31  Score=222.89  Aligned_cols=143  Identities=10%  Similarity=0.028  Sum_probs=104.5

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      .+...+++.+|+++|+++ .|+||+++++++++++..||||||++|++|.+++..                 ...+++. 
T Consensus       281 ~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~-----------------~~~l~~~-  342 (569)
T 4azs_A          281 SQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAA-----------------GEEIDRE-  342 (569)
T ss_dssp             HHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHT-----------------TCCCCHH-
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHh-----------------CCCCCHH-
Confidence            455678899999999999 699999999999999999999999999999887763                 2345544 


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCc
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                        .|+.||+.||+|+|++|||||||||+|||++.        ||+++......    ..+||+.|+|||++.+   ....
T Consensus       343 --~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g---~~~~  417 (569)
T 4azs_A          343 --KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE---NKSW  417 (569)
T ss_dssp             --HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC---------
T ss_pred             --HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC---CCCC
Confidence              47899999999999999999999999999976        99877554332    3456999999999974   3567


Q ss_pred             hhhHHHHHHHHHHHhhCCC
Q 037274          154 KSDIWLIGITALQFPCGGL  172 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~  172 (245)
                      .+|+||+|++++++.++..
T Consensus       418 ~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          418 NGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             -----------CCCCTTHH
T ss_pred             cccccccccchhhhccccc
Confidence            8999999999888766543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.87  E-value=1.8e-23  Score=175.71  Aligned_cols=140  Identities=10%  Similarity=-0.023  Sum_probs=113.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++..++...+..++||||+++++|.+++..                         +..+
T Consensus       382 ~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~-------------------------~~~i  436 (540)
T 3en9_A          382 RKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED-------------------------NLDI  436 (540)
T ss_dssp             HHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT-------------------------CTHH
T ss_pred             HHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH-------------------------HHHH
Confidence            356689999999999999999555555577788999999999999776651                         3478


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc------ccCccccccC-----------CCCccccccccCceecCCCCCCC
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI------FNDDTRNWIS-----------SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------f~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +.|++.||.|||++||+||||||+|||++.      ||+++.....           ....+|+.|+|||++......|+
T Consensus       437 ~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~  516 (540)
T 3en9_A          437 AYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYK  516 (540)
T ss_dssp             HHHHHHHHHHHHHTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCcCccCCCCHHHEEECCeEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHH
Confidence            899999999999999999999999999874      8887765442           13456999999999975223467


Q ss_pred             chhhHHHHHHHHHHHhhCCCCC
Q 037274          153 CKSDIWLIGITALQFPCGGLPV  174 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~  174 (245)
                      ..+|+|+..+-..+-+.++.+|
T Consensus       517 ~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          517 SVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHCTTHHHHHHHHHHHHTCSCC
T ss_pred             HHHhHHHHHHHHHHHHHhcccc
Confidence            7889999988887777666554

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.61  E-value=4e-16  Score=120.83  Aligned_cols=106  Identities=11%  Similarity=-0.025  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ....+.+|+.++++++  | +++++.+. .+..++||||+++++|.+ +.                       ......+
T Consensus       147 ~~~~~~~E~~~l~~l~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~-----------------------~~~~~~i  198 (282)
T 1zar_A          147 AIRSARNEFRALQKLQ--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VR-----------------------VENPDEV  198 (282)
T ss_dssp             HHHHHHHHHHHHHHTT--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CC-----------------------CSCHHHH
T ss_pred             HHHHHHHHHHHHHhcc--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cc-----------------------hhhHHHH
Confidence            5678999999999999  4 55666443 356799999999999944 21                       1234468


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceecccccCccccccCCCCccccccccCceec
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVN  145 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~f~~~~~~~~~~~~~~~~~y~aPE~~~  145 (245)
                      +.|++.||.+||+.|++||||||+|||++ -|..+... ......+..+.|||.+.
T Consensus       199 ~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~D-FG~a~~~~~~~a~e~l~  252 (282)
T 1zar_A          199 LDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIID-FPQSVEVGEEGWREILE  252 (282)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECC-CTTCEETTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEE-CCCCeECCCCCHHHHHH
Confidence            99999999999999999999999999998 22222221 11223456678888875

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.33  E-value=2.4e-12  Score=98.33  Aligned_cols=85  Identities=9%  Similarity=0.012  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHhhCCCCCe--eeEEEEEEeCceeEEEeeeccc-C----CHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           11 YAKLAREIYRYKHLSHPNI--IPIYKTMISQRQLFYAEIACMI-G----SLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~I--v~~~~~~~~~~~~~lv~e~~~~-~----~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ...+.+|+.++++|.|+++  ...++.    +..++||||+.+ |    +|.++..                    ..++
T Consensus       114 ~~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~--------------------~~~~  169 (258)
T 1zth_A          114 FIWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR--------------------ELKE  169 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG--------------------GGGG
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh--------------------ccCh
Confidence            3578999999999988754  334432    357899999953 3    5533221                    1234


Q ss_pred             HHHHHHHHHHHHHHHHHH-hCCcccccCCCCceeccc
Q 037274           84 DCLAIAHKETLKGLSYLQ-GEGLFHKNISAGHILHNI  119 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh-~~~ivH~dlkp~nil~~~  119 (245)
                      ..+..++.|++.||.+|| +.|++||||||+|||++.
T Consensus       170 ~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~  206 (258)
T 1zth_A          170 LDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID  206 (258)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC
Confidence            567789999999999999 999999999999999875

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.14  E-value=2.9e-11  Score=96.64  Aligned_cols=81  Identities=15%  Similarity=0.015  Sum_probs=58.3

Q ss_pred             HHHHHHHHhhCCCCCee--eEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHH
Q 037274           14 LAREIYRYKHLSHPNII--PIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHK   91 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv--~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (245)
                      ..+|...|.+|.+.++.  ..++.  .  ..++||||++|++|..+.                       .......++.
T Consensus       160 A~kE~~nL~rL~~~gv~vp~p~~~--~--~~~LVME~i~G~~L~~l~-----------------------~~~~~~~l~~  212 (397)
T 4gyi_A          160 AIKEFAFMKALYEEGFPVPEPIAQ--S--RHTIVMSLVDALPMRQVS-----------------------SVPDPASLYA  212 (397)
T ss_dssp             HHHHHHHHHHHHHTTCSCCCEEEE--E--TTEEEEECCSCEEGGGCC-----------------------CCSCHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeec--c--CceEEEEecCCccHhhhc-----------------------ccHHHHHHHH
Confidence            35678888888654442  22322  2  347999999998883321                       1123356789


Q ss_pred             HHHHHHHHHHhCCcccccCCCCceeccccc
Q 037274           92 ETLKGLSYLQGEGLFHKNISAGHILHNIFN  121 (245)
Q Consensus        92 qi~~~l~~lh~~~ivH~dlkp~nil~~~f~  121 (245)
                      |++.+|.+||+.|+|||||||.|||++.-|
T Consensus       213 qll~~l~~lH~~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          213 DLIALILRLAKHGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             HHHHHHHHHHHTTEECSCCSTTSEEEEEEE
T ss_pred             HHHHHHHHHHHCCCcCCCCCHHHEEEeCCC
Confidence            999999999999999999999999997643

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.67  E-value=4.7e-08  Score=74.55  Aligned_cols=69  Identities=4%  Similarity=-0.189  Sum_probs=52.0

Q ss_pred             HHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           12 AKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        12 ~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      ..+.+|+.+++.|. +..+.+++++....+..++|||+++|.+|.+...                      +......++
T Consensus        54 ~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~----------------------~~~~~~~~~  111 (263)
T 3tm0_A           54 YDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE----------------------DEQSPEKII  111 (263)
T ss_dssp             TCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC----------------------TTTCHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC----------------------CcccHHHHH
Confidence            46899999999995 5677789998888889999999999999854321                      011223566


Q ss_pred             HHHHHHHHHHHh
Q 037274           91 KETLKGLSYLQG  102 (245)
Q Consensus        91 ~qi~~~l~~lh~  102 (245)
                      .+++.+|+.||+
T Consensus       112 ~~l~~~l~~LH~  123 (263)
T 3tm0_A          112 ELYAECIRLFHS  123 (263)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC
Confidence            778888888887

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.50  E-value=1.6e-07  Score=71.27  Aligned_cols=44  Identities=11%  Similarity=0.014  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHhhCCCCC--eeeEEEEEEeCceeEEEeeecccCCHH
Q 037274           12 AKLAREIYRYKHLSHPN--IIPIYKTMISQRQLFYAEIACMIGSLD   55 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~--Iv~~~~~~~~~~~~~lv~e~~~~~~L~   55 (245)
                      ..+.+|+.+++.+.+.+  +.+++++...++..++|||+++|.+|.
T Consensus        58 ~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           58 NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            46789999999996544  445888887777899999999998873

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.42  E-value=5.6e-07  Score=71.85  Aligned_cols=74  Identities=12%  Similarity=0.037  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHhhCCC--CCeeeEEEEEEeC---ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274           10 EYAKLAREIYRYKHLSH--PNIIPIYKTMISQ---RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h--~~Iv~~~~~~~~~---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ....+.+|+.+++.|..  ..+.++++++.+.   +..++|||+++|.++.+-                   .-..++..
T Consensus        79 ~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~-------------------~~~~l~~~  139 (359)
T 3dxp_A           79 SAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQ-------------------SLPGMSPA  139 (359)
T ss_dssp             ---CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCT-------------------TCTTCCHH
T ss_pred             cHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCC-------------------ccccCCHH
Confidence            34578899999999974  4577888887665   458999999998777210                   01235566


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 037274           85 CLAIAHKETLKGLSYLQG  102 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~  102 (245)
                      ....++.+++..|+.||+
T Consensus       140 ~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          140 ERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhC
Confidence            677778888888888886

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.38  E-value=1e-07  Score=74.39  Aligned_cols=55  Identities=11%  Similarity=0.033  Sum_probs=35.4

Q ss_pred             ccccccHHHHHHHHHHHHHHhhCC-CCCe--eeEEEEEEeCc---eeEEEeeecccCCHHH
Q 037274            2 IDINHQAEEYAKLAREIYRYKHLS-HPNI--IPIYKTMISQR---QLFYAEIACMIGSLDS   56 (245)
Q Consensus         2 ~~~~~~~~~~~~~~~E~~~l~~l~-h~~I--v~~~~~~~~~~---~~~lv~e~~~~~~L~~   56 (245)
                      +++.........+.+|+.+++.|. +..+  .+.+......+   ..|+||++++|.++.+
T Consensus        45 lR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~  105 (304)
T 3sg8_A           45 FKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTP  105 (304)
T ss_dssp             EEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCH
T ss_pred             EEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCc
Confidence            344444556788999999999884 3332  34444332222   3588999999988753

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.89  E-value=0.00025  Score=51.73  Aligned_cols=127  Identities=13%  Similarity=-0.085  Sum_probs=77.5

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHh-CCcccccCCCCceecccccCccccccCCCCccccccccCceecCCCCCCCchhh
Q 037274           78 RYGITVDCLAIAHKETLKGLSYLQG-EGLFHKNISAGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        78 ~~~~~~~~~~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~f~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      +.++++.++|.++.|.+.+|.-+-. ..-...=+.|..|++..-|......... ......+.|||...   ...+.+.-
T Consensus        43 ~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~~~s-~~~~~~~~~pe~~~---~~~te~~~  118 (229)
T 2yle_A           43 NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAPAAD-DAGEPPPVAGKLGY---SQCMETEV  118 (229)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECCC-------------CCSS---SSSCHHHH
T ss_pred             CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceecccccc-cccccCCCChhhcc---ccchHHHH
Confidence            5789999999999999999876622 1111222345667766644433322111 12244567888764   34678999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCC-----------
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP-----------  225 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-----------  225 (245)
                      |||||+++|.-+-=..|=                               .....+|+.+.+||..|..-           
T Consensus       119 IysLG~tLY~ALDygL~e-------------------------------~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~  167 (229)
T 2yle_A          119 IESLGIIIYKALDYGLKE-------------------------------NEERELSPPLEQLIDHMANTVEADGSNDEGY  167 (229)
T ss_dssp             HHHHHHHHHHHHTTTCCT-------------------------------TEEECCCHHHHHHHHHHTTCCC---------
T ss_pred             HHHHHHHHHHHhhcCCCc-------------------------------ccchhhCHHHHHHHHHHHhcccccccccccc
Confidence            999999999876422220                               01166889999999999765           


Q ss_pred             --------------CCCCCccHHHHhhc
Q 037274          226 --------------DPAKRPAAEAQVLQ  239 (245)
Q Consensus       226 --------------~p~~Rpt~~~~l~~  239 (245)
                                    .+..|.+..++++.
T Consensus       168 ~~~~eg~~d~~~~~~~~~~~sl~~Vi~~  195 (229)
T 2yle_A          168 EAAEEGLGDEDEKRKISAIRSYRDVMKL  195 (229)
T ss_dssp             -----------CCSCCCCCCSHHHHHHH
T ss_pred             cccccccccccccccccCcCCHHHHHHH
Confidence                          24578889888753

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.85  E-value=9.5e-05  Score=57.56  Aligned_cols=54  Identities=17%  Similarity=-0.007  Sum_probs=38.5

Q ss_pred             cccccHHHHHHHHHHHHHHhhCCCC---CeeeEEEEEE-eCceeEEEeeecccCCHHH
Q 037274            3 DINHQAEEYAKLAREIYRYKHLSHP---NIIPIYKTMI-SQRQLFYAEIACMIGSLDS   56 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l~h~---~Iv~~~~~~~-~~~~~~lv~e~~~~~~L~~   56 (245)
                      ++.........+.+|+.+|+.|.+.   .+.+.+.+.. ..+..+++|++++|.++.+
T Consensus        45 R~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           45 RFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGE  102 (306)
T ss_dssp             EEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHH
T ss_pred             EecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECch
Confidence            4444455678899999999999753   2445555553 3456789999999988865

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.64  E-value=0.00022  Score=54.21  Aligned_cols=50  Identities=10%  Similarity=0.054  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHHhhCCC-CCeeeEEEEEEeCceeEEEeeecccCCHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSH-PNIIPIYKTMISQRQLFYAEIACMIGSLDSIM   58 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h-~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~   58 (245)
                      .....+.+|...|+.|.. --+-++++++.+++..++||++++|.++.+..
T Consensus        61 ~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~  111 (272)
T 4gkh_A           61 SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVL  111 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHH
T ss_pred             CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccc
Confidence            345678999999998852 23557788888888999999999998876654

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.55  E-value=0.003  Score=50.06  Aligned_cols=45  Identities=4%  Similarity=-0.134  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHhhCC-C--CCeeeEEEEEEeC---ceeEEEeeecccCCHHH
Q 037274           12 AKLAREIYRYKHLS-H--PNIIPIYKTMISQ---RQLFYAEIACMIGSLDS   56 (245)
Q Consensus        12 ~~~~~E~~~l~~l~-h--~~Iv~~~~~~~~~---~~~~lv~e~~~~~~L~~   56 (245)
                      ..+.+|+.+++.|. +  -.+.+++++..+.   +..++|||+++|.++.+
T Consensus        72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A           72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCB
T ss_pred             hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhh
Confidence            45788999988884 2  2456777776554   35789999999877643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=91.71  E-value=0.26  Score=37.79  Aligned_cols=39  Identities=5%  Similarity=-0.032  Sum_probs=23.8

Q ss_pred             HHHHHHHHhhCCCCCe-eeEEEEEEeCceeEEEeeec-ccCCH
Q 037274           14 LAREIYRYKHLSHPNI-IPIYKTMISQRQLFYAEIAC-MIGSL   54 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~I-v~~~~~~~~~~~~~lv~e~~-~~~~L   54 (245)
                      ..+|+.+++.+....+ .++++.  +.+.-+++++|+ ++.++
T Consensus        55 r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           55 RANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM   95 (301)
T ss_dssp             HHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred             HHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence            3568888887753233 345543  343457899999 65454

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=88.30  E-value=0.59  Score=36.26  Aligned_cols=16  Identities=25%  Similarity=0.476  Sum_probs=14.5

Q ss_pred             CCcccccCCCCceecc
Q 037274          103 EGLFHKNISAGHILHN  118 (245)
Q Consensus       103 ~~ivH~dlkp~nil~~  118 (245)
                      .+++|+|+++.||+++
T Consensus       222 ~~l~HgD~~~~Nil~~  237 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLG  237 (346)
T ss_dssp             CCEECSSCSTTSEEEC
T ss_pred             CceecCCCCcccEEEe
Confidence            5799999999999985

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=88.22  E-value=1.6  Score=33.81  Aligned_cols=64  Identities=14%  Similarity=-0.026  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHHHhhCC---CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274           10 EYAKLAREIYRYKHLS---HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~---h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ....+..|...|+.|.   ...+.+++++....+..++|||++++..+.                       .       
T Consensus        71 ~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~-----------------------~-------  120 (312)
T 3jr1_A           71 YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNK-----------------------Q-------  120 (312)
T ss_dssp             GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCC-----------------------T-------
T ss_pred             cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCC-----------------------c-------
Confidence            3567899999999884   245778888877778899999999986651                       0       


Q ss_pred             HHHHHHHHHHHHHHHhCC
Q 037274           87 AIAHKETLKGLSYLQGEG  104 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~  104 (245)
                       ....++...|+-||..+
T Consensus       121 -~~~~~lG~~LA~LH~~~  137 (312)
T 3jr1_A          121 -SSFTIFAEKIAQLHQIQ  137 (312)
T ss_dssp             -THHHHHHHHHHHHHHCC
T ss_pred             -hhHHHHHHHHHHHHcCC
Confidence             13467888899999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	245
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-21
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-20
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-20
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-19
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-19
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-19
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	9e-19
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-18
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-18
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-18
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-18
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-18
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-17
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-17
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-16
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-16
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-16
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-16
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-16
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	7e-16
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-16
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-15
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-15
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-15
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-15
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-15
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-15
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-15
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-15
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-15
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-15
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-15
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	7e-15
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-15
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-15
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	9e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	9e-15
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-14
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-14
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-14
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-14
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-13
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-13
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-13
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-13
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-13
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-13
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-12
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-11
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-08
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-05

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.9 bits (215), Expect = 6e-21
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 41/253 (16%)

Query: 8   AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPA 67
            ++      E+   +   H NI+       + +     +  C   SL   +         
Sbjct: 45  PQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW-CEGSSLYHHL--------- 94

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------- 118
                  +       +  L    ++T +G+ YL  + + H+++ + +I  +         
Sbjct: 95  -------HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGD 147

Query: 119 -----IFNDDTRNWISSSSSITTWAAAPEVVNFGD-DYYSCKSDIWLIGITALQFPCGGL 172
                + +  + +      S +    APEV+   D + YS +SD++  GI   +   G L
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207

Query: 173 PVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
           P S   + D +  M+ +   S  L    +           K    ++  CL     +RP 
Sbjct: 208 PYSNINNRDQIIFMVGRGYLSPDLSKVRSN--------CPKAMKRLMAECLKKKRDERPL 259

Query: 233 AEAQVLQEMWHFR 245
              Q+L  +    
Sbjct: 260 FP-QILASIELLA 271

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 1e-20
 Identities = 55/254 (21%), Positives = 90/254 (35%), Gaps = 45/254 (17%)

Query: 5   NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLN 64
               EE      EI       HPNI+ +      +  L+     C  G++D++M      
Sbjct: 47  TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM------ 100

Query: 65  SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------ 118
                           +T   + +  K+TL  L+YL    + H+++ AG+IL        
Sbjct: 101 ----------LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIK 150

Query: 119 -------IFNDDTRNWISSSSSITTWAAAPEVV---NFGDDYYSCKSDIWLIGITALQFP 168
                    N  T     S      W  APEVV      D  Y  K+D+W +GIT ++  
Sbjct: 151 LADFGVSAKNTRTIQRRDSFIGTPYW-MAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 209

Query: 169 CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA 228
               P      + ++ K+   +P + +                S NF + +K CL  +  
Sbjct: 210 EIEPPHHELNPMRVLLKIAKSEPPTLAQP-----------SRWSSNFKDFLKKCLEKNVD 258

Query: 229 KRPAAEAQVLQEMW 242
            R     Q+LQ  +
Sbjct: 259 ARWTTS-QLLQHPF 271

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.4 bits (211), Expect = 2e-20
 Identities = 49/254 (19%), Positives = 91/254 (35%), Gaps = 45/254 (17%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            +++  Q ++   +  EI   +   +PNI+    + +   +L+        GSL  ++T 
Sbjct: 52  QMNLQQQPKK-ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL---- 116
             ++      +                   +E L+ L +L    + H++I + +IL    
Sbjct: 111 TCMDEGQIAAVC------------------RECLQALEFLHSNQVIHRDIKSDNILLGMD 152

Query: 117 HNIFNDD--------TRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFP 168
            ++   D              S+   T +  APEVV      Y  K DIW +GI A++  
Sbjct: 153 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMI 210

Query: 169 CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA 228
            G  P      L  +  +                        LS  F + +  CL  D  
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPELQNP-----------EKLSAIFRDFLNRCLDMDVE 259

Query: 229 KRPAAEAQVLQEMW 242
           KR +A+ ++LQ  +
Sbjct: 260 KRGSAK-ELLQHQF 272

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 82.7 bits (204), Expect = 2e-19
 Identities = 44/252 (17%), Positives = 92/252 (36%), Gaps = 45/252 (17%)

Query: 3   DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
                 E++  + +E+   + L HPN I      + +   +     C+  + D +  ++ 
Sbjct: 51  SGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK 110

Query: 63  LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND 122
                    +                     L+GL+YL    + H+++ AG+IL    ++
Sbjct: 111 PLQEVEIAAVT-----------------HGALQGLAYLHSHNMIHRDVKAGNIL---LSE 150

Query: 123 DTR---------NWISSSSSI--TTWAAAPEVV-NFGDDYYSCKSDIWLIGITALQFPCG 170
                       + ++ ++S   T +  APEV+    +  Y  K D+W +GIT ++    
Sbjct: 151 PGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 210

Query: 171 GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
             P+     +  +  +   +  +              +   S+ F N V  CL   P  R
Sbjct: 211 KPPLFNMNAMSALYHIAQNESPALQ------------SGHWSEYFRNFVDSCLQKIPQDR 258

Query: 231 PAAEAQVLQEMW 242
           P +E  +L+  +
Sbjct: 259 PTSE-VLLKHRF 269

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.0 bits (202), Expect = 3e-19
 Identities = 38/256 (14%), Positives = 83/256 (32%), Gaps = 44/256 (17%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           ++D+    +    + +EI   K L+H N++  Y         +     C  G L   +  
Sbjct: 37  IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-- 94

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-- 118
                              G+          + + G+ YL G G+ H++I   ++L +  
Sbjct: 95  ---------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 139

Query: 119 ------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ 166
                       +F  + R  + +    T    APE++    ++++   D+W  GI    
Sbjct: 140 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK-RREFHAEPVDVWSCGIVLTA 198

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
              G LP  +  D         ++    +             + +      ++   L  +
Sbjct: 199 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPW-----------KKIDSAPLALLHKILVEN 247

Query: 227 PAKRPAAEAQVLQEMW 242
           P+ R      + ++ W
Sbjct: 248 PSARITIP-DIKKDRW 262

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.6 bits (201), Expect = 8e-19
 Identities = 34/252 (13%), Positives = 71/252 (28%), Gaps = 42/252 (16%)

Query: 4   INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPL 63
           +  +  +   + +EI       H NI+ ++++  S  +L           +   +     
Sbjct: 38  VKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERI----- 92

Query: 64  NSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDD 123
                      N   + +    +     +  + L +L    + H +I   +I++      
Sbjct: 93  -----------NTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSS 141

Query: 124 T-------------RNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
           T                            APEV     D  S  +D+W +G        G
Sbjct: 142 TIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV--HQHDVVSTATDMWSLGTLVYVLLSG 199

Query: 171 GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
             P     +  I+  ++  +                  + +S    + V   L  +   R
Sbjct: 200 INPFLAETNQQIIENIMNAEYTFDEEAF----------KEISIEAMDFVDRLLVKERKSR 249

Query: 231 PAAEAQVLQEMW 242
             A  + LQ  W
Sbjct: 250 MTAS-EALQHPW 260

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 81.7 bits (201), Expect = 9e-19
 Identities = 34/255 (13%), Positives = 77/255 (30%), Gaps = 43/255 (16%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            +   H++++   + +EI     L HP ++ ++       ++         G L   +  
Sbjct: 58  FVMTPHESDK-ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-- 114

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
                               ++ D      ++  KGL ++      H ++   +I+    
Sbjct: 115 --------------ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK 160

Query: 121 NDDT-------------RNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQF 167
             +                     ++ T   AAPEV           +D+W +G+ +   
Sbjct: 161 RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE--GKPVGYYTDMWSVGVLSYIL 218

Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
             G  P     D + +  +            +           +S++  + ++  L  DP
Sbjct: 219 LSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG----------ISEDGKDFIRKLLLADP 268

Query: 228 AKRPAAEAQVLQEMW 242
             R     Q L+  W
Sbjct: 269 NTRMTIH-QALEHPW 282

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (196), Expect = 2e-18
 Identities = 38/249 (15%), Positives = 81/249 (32%), Gaps = 50/249 (20%)

Query: 7   QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSP 66
           +A    +L RE+    HL HPNI+ +Y       +++       +G++   +        
Sbjct: 46  KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE 105

Query: 67  AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-------- 118
             T   +                  E    LSY   + + H++I   ++L          
Sbjct: 106 QRTATYI-----------------TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 148

Query: 119 -----IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
                +    +R         T     PE++      +  K D+W +G+   +F  G  P
Sbjct: 149 DFGWSVHAPSSRRTTLCG---TLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPP 203

Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
                  +   ++   +                    +++   +++   L  +P++RP  
Sbjct: 204 FEANTYQETYKRISRVEFTFPDF--------------VTEGARDLISRLLKHNPSQRPML 249

Query: 234 EAQVLQEMW 242
             +VL+  W
Sbjct: 250 R-EVLEHPW 257

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 80.1 bits (197), Expect = 3e-18
 Identities = 39/255 (15%), Positives = 83/255 (32%), Gaps = 43/255 (16%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            I+  +  ++Y  +  EI     L HP +I ++     + ++         G L   +  
Sbjct: 61  FINTPYPLDKY-TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIA- 118

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
                             Y ++   +    ++  +GL ++    + H +I   +I+    
Sbjct: 119 ---------------AEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK 163

Query: 121 NDDT-------------RNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQF 167
              +              + I   ++ T   AAPE+V+         +D+W IG+     
Sbjct: 164 KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE--PVGFYTDMWAIGVLGYVL 221

Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
             G  P +   DL+ +  +     +                 ++S    + +K  L  +P
Sbjct: 222 LSGLSPFAGEDDLETLQNVKRCDWEFDEDAF----------SSVSPEAKDFIKNLLQKEP 271

Query: 228 AKRPAAEAQVLQEMW 242
            KR       L+  W
Sbjct: 272 RKRLTVH-DALEHPW 285

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.7 bits (196), Expect = 3e-18
 Identities = 49/256 (19%), Positives = 87/256 (33%), Gaps = 44/256 (17%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            I       +   +  EI     + HPNI+ +     S   L+        G L   +  
Sbjct: 41  CIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE 100

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
           +   +      ++                  + L  + YL   G+ H+++   ++L+   
Sbjct: 101 KGFYTERDASRLI-----------------FQVLDAVKYLHDLGIVHRDLKPENLLYYSL 143

Query: 121 NDDTRNWIS--------------SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ 166
           ++D++  IS              S++  T    APEV       YS   D W IG+ A  
Sbjct: 144 DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV--LAQKPYSKAVDCWSIGVIAYI 201

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
             CG  P     D  +  ++L  + +  S               +S +  + ++  +  D
Sbjct: 202 LLCGYPPFYDENDAKLFEQILKAEYEFDSPYW----------DDISDSAKDFIRHLMEKD 251

Query: 227 PAKRPAAEAQVLQEMW 242
           P KR   E Q LQ  W
Sbjct: 252 PEKRFTCE-QALQHPW 266

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (193), Expect = 5e-18
 Identities = 44/251 (17%), Positives = 85/251 (33%), Gaps = 44/251 (17%)

Query: 4   INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPL 63
           I   A        E      LSHP ++ +Y   + Q  +         G L   +  +  
Sbjct: 37  IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG 96

Query: 64  NSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL------- 116
              A T L M                  +  +G++YL+   + H++++A + L       
Sbjct: 97  LFAAETLLGM----------------CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVI 140

Query: 117 ------HNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
                    F  D +   S+ +      A+PEV +F    YS KSD+W  G+   +    
Sbjct: 141 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR--YSSKSDVWSFGVLMWEVFSE 198

Query: 171 GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
           G      +    + + +    +    ++A                + ++  C    P  R
Sbjct: 199 GKIPYENRSNSEVVEDISTGFRLYKPRLASTH------------VYQIMNHCWKERPEDR 246

Query: 231 PAAEAQVLQEM 241
           PA   ++L+++
Sbjct: 247 PAFS-RLLRQL 256

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 5e-18
 Identities = 48/240 (20%), Positives = 87/240 (36%), Gaps = 40/240 (16%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI-GSLDSIMTYRPLNSPAATQLIMS 74
            E      L H N++ +   ++ ++   Y     M  GSL                  + 
Sbjct: 49  AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD---------------YLR 93

Query: 75  NRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL----HNIFNDDTRNWISS 130
           +R R  +  DCL     +  + + YL+G    H++++A ++L    +     D      +
Sbjct: 94  SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 153

Query: 131 SSSITT-----WAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTK 185
           SS+  T        APE +      +S KSD+W  GI   +    G     R  L  +  
Sbjct: 154 SSTQDTGKLPVKWTAPEALREKK--FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP 211

Query: 186 MLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR 245
            + K  K  +    P               + ++K C   D A RP+   Q+ +++ H +
Sbjct: 212 RVEKGYKMDAPDGCPPA------------VYEVMKNCWHLDAAMRPSFL-QLREQLEHIK 258

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.3 bits (192), Expect = 1e-17
 Identities = 33/266 (12%), Positives = 75/266 (28%), Gaps = 48/266 (18%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
           I +     ++ +L  E   YK +     IP  +   ++       +  +  SL+ +    
Sbjct: 37  IKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLF--- 93

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN 121
                        N      ++  + +   + +  + Y+  +   H+++   + L  +  
Sbjct: 94  -------------NFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 140

Query: 122 DD----------------------TRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWL 159
                                        + + + T   A+           S + D+  
Sbjct: 141 KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHL--GIEQSRRDDLES 198

Query: 160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMV 219
           +G   + F  G LP    +      K      K  S    P E    G       F   +
Sbjct: 199 LGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST---PIEVLCKG---YPSEFATYL 252

Query: 220 KICLAPDPAKRPAAEA--QVLQEMWH 243
             C +     +P      Q+ + ++H
Sbjct: 253 NFCRSLRFDDKPDYSYLRQLFRNLFH 278

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 2e-17
 Identities = 47/272 (17%), Positives = 88/272 (32%), Gaps = 49/272 (18%)

Query: 1   VIDINHQAEE----YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDS 56
            I + H++E          REI   + LSHPNII +      +  +              
Sbjct: 30  KIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVI 89

Query: 57  IMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
           I     + +P+  +  M                   TL+GL YL    + H+++   ++L
Sbjct: 90  IKDNSLVLTPSHIKAYM-----------------LMTLQGLEYLHQHWILHRDLKPNNLL 132

Query: 117 HNIFND------------DTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITA 164
            +                 + N   +   +T W  APE++  G   Y    D+W +G   
Sbjct: 133 LDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF-GARMYGVGVDMWAVGCIL 191

Query: 165 LQFPCGGLPVSRRQDLDIMTKML--------------MKQPKSTSLQVAPNEDTTHGTRT 210
            +       +    DLD +T++                  P   + +  P     H    
Sbjct: 192 AELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSA 251

Query: 211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
              +  ++++     +P  R  A  Q L+  +
Sbjct: 252 AGDDLLDLIQGLFLFNPCARITAT-QALKMKY 282

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (189), Expect = 3e-17
 Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 52/256 (20%)

Query: 3   DINHQAEEYAKLAREIYRYKH-LSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
           D+    ++      E         HP +  ++ T  ++  LF+       G L   +   
Sbjct: 38  DVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC 97

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN 121
                +                        E + GL +L  +G+ ++++   +IL +   
Sbjct: 98  HKFDLSRATFYA-----------------AEIILGLQFLHSKGIVYRDLKLDNILLD--- 137

Query: 122 DDTRNWIS---------------SSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ 166
            D    I+               ++   T    APE++      Y+   D W  G+   +
Sbjct: 138 KDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILL--GQKYNHSVDWWSFGVLLYE 195

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
              G  P   + + ++   + M  P                 R L K   +++      +
Sbjct: 196 MLIGQSPFHGQDEEELFHSIRMDNPFYP--------------RWLEKEAKDLLVKLFVRE 241

Query: 227 PAKRPAAEAQVLQEMW 242
           P KR      + Q   
Sbjct: 242 PEKRLGVRGDIRQHPL 257

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.2 bits (184), Expect = 1e-16
 Identities = 40/258 (15%), Positives = 87/258 (33%), Gaps = 50/258 (19%)

Query: 3   DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ----RQLFYAEIACMIGSLDSIM 58
           D+      Y +  RE      L+HP I+ +Y T  ++       +         +L  I+
Sbjct: 43  DLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 102

Query: 59  -TYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH 117
            T  P+    A ++I                   +  + L++    G+ H+++   +I+ 
Sbjct: 103 HTEGPMTPKRAIEVI------------------ADACQALNFSHQNGIIHRDVKPANIMI 144

Query: 118 N---------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGI 162
           +               I +       +++   T    +PE      D    +SD++ +G 
Sbjct: 145 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR--GDSVDARSDVYSLGC 202

Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
              +   G  P +    + +  + + + P   S +             LS +   +V   
Sbjct: 203 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH----------EGLSADLDAVVLKA 252

Query: 223 LAPDPAKRPAAEAQVLQE 240
           LA +P  R    A++  +
Sbjct: 253 LAKNPENRYQTAAEMRAD 270

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 3e-16
 Identities = 42/255 (16%), Positives = 83/255 (32%), Gaps = 52/255 (20%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSP 66
            E   L  E+   + L HPNI+  Y  +I +    L+     C  G L S+         
Sbjct: 45  AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV--------- 95

Query: 67  AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYL-----QGEGLFHKNISAGHILHN--- 118
               +    + R  +  + +     +    L         G  + H+++   ++  +   
Sbjct: 96  ----ITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ 151

Query: 119 -----------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQF 167
                      I N DT    + +   T +  +PE +N     Y+ KSDIW +G    + 
Sbjct: 152 NVKLGDFGLARILNHDTS--FAKAFVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLLYEL 207

Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
                P +     ++  K+   + +    +              S     ++   L    
Sbjct: 208 CALMPPFTAFSQKELAGKIREGKFRRIPYRY-------------SDELNEIITRMLNLKD 254

Query: 228 AKRPAAEAQVLQEMW 242
             RP+ E ++L+   
Sbjct: 255 YHRPSVE-EILENPL 268

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 3e-16
 Identities = 48/272 (17%), Positives = 93/272 (34%), Gaps = 50/272 (18%)

Query: 1   VIDINHQAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
            I ++ + E     A REI   K L+HPNI+ +   + ++ +L+                
Sbjct: 34  KIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKK---- 89

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN- 118
                        M      GI +  +     + L+GL++     + H+++   ++L N 
Sbjct: 90  ------------FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT 137

Query: 119 -------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITAL 165
                         F    R +  +   +T W  APE++  G  YYS   DIW +G    
Sbjct: 138 EGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFA 194

Query: 166 QFPCGGLPVSRRQDLDIMTKMLMKQPKST---------------SLQVAPNEDTTHGTRT 210
           +            ++D + ++                       S      +D +     
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254

Query: 211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
           L ++  +++   L  DP KR +A+   L   +
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAK-AALAHPF 285

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 3e-16
 Identities = 38/253 (15%), Positives = 85/253 (33%), Gaps = 28/253 (11%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
            +      +++   A E+     L  HPNII +      +  L+ A      G+L   + 
Sbjct: 44  RMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR 103

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN- 118
              +         ++N     ++   L     +  +G+ YL  +   H++++A +IL   
Sbjct: 104 KSRVLETDPA-FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 162

Query: 119 ----------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFP 168
                     +          +   +     A E +N+    Y+  SD+W  G+   +  
Sbjct: 163 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIV 220

Query: 169 CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA 228
             G           + + L +  +        +E             +++++ C    P 
Sbjct: 221 SLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDE------------VYDLMRQCWREKPY 268

Query: 229 KRPAAEAQVLQEM 241
           +RP+   Q+L  +
Sbjct: 269 ERPSFA-QILVSL 280

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 4e-16
 Identities = 39/256 (15%), Positives = 85/256 (33%), Gaps = 51/256 (19%)

Query: 6   HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDS-IMTYRPLN 64
           +      +L  E    + L +P I+ +     ++  +   E+   +G L+  +   R + 
Sbjct: 47  NDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEM-AELGPLNKYLQQNRHVK 105

Query: 65  SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------ 118
                +L+                   +   G+ YL+     H++++A ++L        
Sbjct: 106 DKNIIELV------------------HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAK 147

Query: 119 ---------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC 169
                    +  D+      +         APE +N+    +S KSD+W  G+   +   
Sbjct: 148 ISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY--KFSSKSDVWSFGVLMWEAFS 205

Query: 170 GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK 229
            G    R      +T ML K  +   +                +  ++++ +C   D   
Sbjct: 206 YGQKPYRGMKGSEVTAMLEKGER---MGCPAG---------CPREMYDLMNLCWTYDVEN 253

Query: 230 RPAAEA--QVLQEMWH 243
           RP   A    L+  ++
Sbjct: 254 RPGFAAVELRLRNYYY 269

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 5e-16
 Identities = 46/283 (16%), Positives = 90/283 (31%), Gaps = 61/283 (21%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           +I +  +     ++ RE+      + P I+  Y    S  ++         GSLD ++  
Sbjct: 38  LIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-- 95

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYL-QGEGLFHKNISAGHILHNI 119
                          +    I    L       +KGL+YL +   + H+++   +IL N 
Sbjct: 96  ---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140

Query: 120 FND----------DTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPC 169
             +             + +++S   T    +PE +     +YS +SDIW +G++ ++   
Sbjct: 141 RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAV 198

Query: 170 GGLP------------------------------VSRRQDLDIMTKMLMKQPKSTSLQVA 199
           G  P                                R      M              + 
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258

Query: 200 PNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
                   +   S  F + V  CL  +PA+R   + Q++   +
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK-QLMVHAF 300

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 5e-16
 Identities = 44/261 (16%), Positives = 87/261 (33%), Gaps = 37/261 (14%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
           ++     + E   L  E+     L SH NI+ +         ++     C  G L + + 
Sbjct: 74  MLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 133

Query: 60  YR------PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAG 113
            +              + +        +T + L     +  KG+ +L+ +   H++++A 
Sbjct: 134 SKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 193

Query: 114 HILHN--------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWL 159
           ++L                    D+   +  ++ +     APE +  G   Y+ KSD+W 
Sbjct: 194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG--IYTIKSDVWS 251

Query: 160 IGITALQ-FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM 218
            GI   + F  G  P           K++    K      A  E             + +
Sbjct: 252 YGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEE------------IYII 299

Query: 219 VKICLAPDPAKRPAAEAQVLQ 239
           ++ C A D  KRP+    +  
Sbjct: 300 MQSCWAFDSRKRPSFP-NLTS 319

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 7e-16
 Identities = 43/255 (16%), Positives = 87/255 (34%), Gaps = 47/255 (18%)

Query: 3   DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
           D+  Q E      RE+     L H N+I +Y  +++       E+   +GSL   +    
Sbjct: 47  DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTEL-APLGSLLDRL---- 101

Query: 63  LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHI------- 115
                        +H+    +  L+    +  +G+ YL+ +   H++++A ++       
Sbjct: 102 ------------RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 149

Query: 116 -------LHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ-F 167
                  L      +  +++        +A            +S  SD W+ G+T  + F
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMF 208

Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
             G  P        I+ K+  +  +    +               ++ +N++  C A  P
Sbjct: 209 TYGQEPWIGLNGSQILHKIDKEGERLPRPE------------DCPQDIYNVMVQCWAHKP 256

Query: 228 AKRPAAEA--QVLQE 240
             RP   A    L E
Sbjct: 257 EDRPTFVALRDFLLE 271

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 7e-16
 Identities = 38/256 (14%), Positives = 95/256 (37%), Gaps = 31/256 (12%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
           ++  +   ++ + L  E+   K +  H NII +         L+        G+L   + 
Sbjct: 52  MLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 111

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN- 118
            R       +     N      + D ++ A+ +  +G+ YL  +   H++++A ++L   
Sbjct: 112 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY-QVARGMEYLASKKCIHRDLAARNVLVTE 170

Query: 119 -------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITAL 165
                          +       +++  +     APE +      Y+ +SD+W  G+   
Sbjct: 171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVWSFGVLLW 228

Query: 166 QFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP 225
           +    G        ++ + K+L +  +   +    N          +   + M++ C   
Sbjct: 229 EIFTLGGSPYPGVPVEELFKLLKEGHR---MDKPSN---------CTNELYMMMRDCWHA 276

Query: 226 DPAKRPAAEAQVLQEM 241
            P++RP  + Q+++++
Sbjct: 277 VPSQRPTFK-QLVEDL 291

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.4 bits (177), Expect = 1e-15
 Identities = 34/251 (13%), Positives = 82/251 (32%), Gaps = 43/251 (17%)

Query: 4   INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPL 63
           +     E  +  +E    K + HPN++ +      +   +        G+L   +     
Sbjct: 50  LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---- 105

Query: 64  NSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL------- 116
                        +R  ++   L     +    + YL+ +   H++++A + L       
Sbjct: 106 -----------ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLV 154

Query: 117 ------HNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
                  +           + +       APE + +    +S KSD+W  G+   +    
Sbjct: 155 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--FSIKSDVWAFGVLLWEIATY 212

Query: 171 GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
           G+      DL  + ++L K  +    +               +  + +++ C   +P+ R
Sbjct: 213 GMSPYPGIDLSQVYELLEKDYRMERPE------------GCPEKVYELMRACWQWNPSDR 260

Query: 231 PAAEAQVLQEM 241
           P+   ++ Q  
Sbjct: 261 PSFA-EIHQAF 270

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 1e-15
 Identities = 53/274 (19%), Positives = 91/274 (33%), Gaps = 52/274 (18%)

Query: 1   VIDINHQAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQL-----FYAEIACMIGSL 54
            +    Q+E +AK A RE+   KH+ H N+I +         L     FY  +  M   L
Sbjct: 50  KLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDL 109

Query: 55  DSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGH 114
             +M +  L       L+                   + LKGL Y+   G+ H+++  G+
Sbjct: 110 GKLMKHEKLGEDRIQFLV------------------YQMLKGLRYIHAAGIIHRDLKPGN 151

Query: 115 ILHN----IFNDDTRNWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITAL 165
           +  N    +   D      + S +T +       APEV+      Y+   DIW +G    
Sbjct: 152 LAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVI-LNWMRYTQTVDIWSVGCIMA 210

Query: 166 QFPCGGLPVSRRQDLDIMTKMLMKQPK-----------------STSLQVAPNEDTTHGT 208
           +   G         LD + +++                         L     +D     
Sbjct: 211 EMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASIL 270

Query: 209 RTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
              S    N+++  L  D  +R  A  + L   +
Sbjct: 271 TNASPLAVNLLEKMLVLDAEQRVTAG-EALAHPY 303

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.2 bits (176), Expect = 1e-15
 Identities = 37/265 (13%), Positives = 86/265 (32%), Gaps = 39/265 (14%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIM-- 58
           ++     A+  A   RE        +PNI+ +       + +         G L+  +  
Sbjct: 50  MLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS 109

Query: 59  -----TYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAG 113
                     +S  +T+  +S+     ++        ++   G++YL      H++++  
Sbjct: 110 MSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR 169

Query: 114 HILHN--------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWL 159
           + L                            + +I      PE +    + Y+ +SD+W 
Sbjct: 170 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF--YNRYTTESDVWA 227

Query: 160 IGITALQFPCGGL-PVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM 218
            G+   +    GL P       +++  +      +                      +N+
Sbjct: 228 YGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACP-------------ENCPLELYNL 274

Query: 219 VKICLAPDPAKRPAAE--AQVLQEM 241
           +++C +  PA RP+     ++LQ M
Sbjct: 275 MRLCWSKLPADRPSFCSIHRILQRM 299

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 2e-15
 Identities = 32/246 (13%), Positives = 73/246 (29%), Gaps = 16/246 (6%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMI-SQRQLFYAEIACMIGSLDSIMT 59
            ++      E ++   E    K  SHPN++ +    + S+            G L + + 
Sbjct: 62  SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR 121

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI 119
               N      +    +   G+            L   + +  E    K    G      
Sbjct: 122 NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 181

Query: 120 FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQD 179
             +       + + +     A E +      ++ KSD+W  G+   +    G P     +
Sbjct: 182 DKEFDSVHNKTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYPDVN 239

Query: 180 LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
              +T  L++  +    +  P+              + ++  C  P    RP+   +++ 
Sbjct: 240 TFDITVYLLQGRRLLQPEYCPDP------------LYEVMLKCWHPKAEMRPSFS-ELVS 286

Query: 240 EMWHFR 245
            +    
Sbjct: 287 RISAIF 292

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 2e-15
 Identities = 41/261 (15%), Positives = 89/261 (34%), Gaps = 50/261 (19%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           V+    +  +  ++ RE      L +P I+ +     ++  +   E+    G L   +  
Sbjct: 43  VLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEM-AGGGPLHKFLV- 100

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-- 118
                            R  I V  +A    +   G+ YL+ +   H++++A ++L    
Sbjct: 101 ---------------GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR 145

Query: 119 -------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITAL 165
                        +  DD+     S+        APE +NF    +S +SD+W  G+T  
Sbjct: 146 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR--KFSSRSDVWSYGVTMW 203

Query: 166 Q-FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA 224
           +    G  P  + +  ++M  +   +     ++  P               + ++  C  
Sbjct: 204 EALSYGQKPYKKMKGPEVMAFIEQGKR----MECPPE---------CPPELYALMSDCWI 250

Query: 225 PDPAKRPAAE--AQVLQEMWH 243
                RP      Q ++  ++
Sbjct: 251 YKWEDRPDFLTVEQRMRACYY 271

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 2e-15
 Identities = 35/247 (14%), Positives = 76/247 (30%), Gaps = 41/247 (16%)

Query: 9   EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAA 68
            E  +   E    K L HPNI+  Y          +         +  +       +   
Sbjct: 50  SERQRFKEEAEMLKGLQHPNIVRFYD--------SWESTVKGKKCIVLVTELMTSGT--- 98

Query: 69  TQLIMSNRHRYGITVDCLAIAHKETLKGLSYL--QGEGLFHKNISAGHILHNIFNDD--- 123
             L    +    + +  L    ++ LKGL +L  +   + H+++   +I           
Sbjct: 99  --LKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKI 156

Query: 124 --------TRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVS 175
                    R   + +   T    APE+     + Y    D++  G+  L+      P S
Sbjct: 157 GDLGLATLKRASFAKAVIGTPEFMAPEMYE---EKYDESVDVYAFGMCMLEMATSEYPYS 213

Query: 176 RRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA 235
             Q+   + + +    K  S             +        +++ C+  +  +R + + 
Sbjct: 214 ECQNAAQIYRRVTSGVKPASFD-----------KVAIPEVKEIIEGCIRQNKDERYSIK- 261

Query: 236 QVLQEMW 242
            +L   +
Sbjct: 262 DLLNHAF 268

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 3e-15
 Identities = 42/257 (16%), Positives = 89/257 (34%), Gaps = 30/257 (11%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDS-IM 58
           ++  +    E   L  E+    +L  H NI+ +                C  G L + + 
Sbjct: 60  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR 119

Query: 59  TYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
             R     + T   +       + ++ L     +  KG+++L  +   H++++A +IL  
Sbjct: 120 RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT 179

Query: 119 --------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITA 164
                            +D+   +  ++ +     APE +      Y+ +SD+W  GI  
Sbjct: 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC--VYTFESDVWSYGIFL 237

Query: 165 LQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA 224
            +    G        +D     ++K+                         ++++K C  
Sbjct: 238 WELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP-----------EHAPAEMYDIMKTCWD 286

Query: 225 PDPAKRPAAEAQVLQEM 241
            DP KRP  + Q++Q +
Sbjct: 287 ADPLKRPTFK-QIVQLI 302

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 3e-15
 Identities = 42/255 (16%), Positives = 84/255 (32%), Gaps = 48/255 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
           +I     +E+  +   E     +LSH  ++ +Y     QR +F        G L + +  
Sbjct: 35  MIKEGSMSED--EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE 92

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-- 118
                            R+      L    K+  + + YL+ +   H++++A + L N  
Sbjct: 93  M----------------RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ 136

Query: 119 -----------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ- 166
                       +  D     S  S      + PEV+ +    +S KSDIW  G+   + 
Sbjct: 137 GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS--KFSSKSDIWAFGVLMWEI 194

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
           +  G +P  R  + +    +                         S+  + ++  C    
Sbjct: 195 YSLGKMPYERFTNSETAEHIAQGLRLYRP-------------HLASEKVYTIMYSCWHEK 241

Query: 227 PAKRPAAEAQVLQEM 241
             +RP  +  +L  +
Sbjct: 242 ADERPTFK-ILLSNI 255

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 4e-15
 Identities = 38/254 (14%), Positives = 81/254 (31%), Gaps = 44/254 (17%)

Query: 4   INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPL 63
           +   +        E    K L H  ++ +Y  +  +      E     GSL        L
Sbjct: 45  LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEY-MENGSLVDF-----L 98

Query: 64  NSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL------- 116
            +P+  +L ++                 +  +G+++++     H+++ A +IL       
Sbjct: 99  KTPSGIKLTINKLLDMA----------AQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 148

Query: 117 ------HNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
                      +D        +       APE +N+G   ++ KSD+W  GI   +    
Sbjct: 149 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEIVTH 206

Query: 171 GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
           G           + + L +  +       P E             + ++++C    P  R
Sbjct: 207 GRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE------------LYQLMRLCWKERPEDR 254

Query: 231 PAAEAQVLQEMWHF 244
           P  +  +   +  F
Sbjct: 255 PTFD-YLRSVLEDF 267

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 4e-15
 Identities = 29/258 (11%), Positives = 79/258 (30%), Gaps = 46/258 (17%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            +      +   ++  E Y    + +P++  +    ++       ++      LD +  +
Sbjct: 45  ELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH 104

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-- 118
           +                              +  KG++YL+   L H++++A ++L    
Sbjct: 105 KDNIGSQYLLNWC-----------------VQIAKGMNYLEDRRLVHRDLAARNVLVKTP 147

Query: 119 ------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ 166
                       +   + + + +    +     A E +      Y+ +SD+W  G+T  +
Sbjct: 148 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR--IYTHQSDVWSYGVTVWE 205

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
               G           ++ +L K  +     +   +             + ++  C   D
Sbjct: 206 LMTFGSKPYDGIPASEISSILEKGERLPQPPICTID------------VYMIMVKCWMID 253

Query: 227 PAKRPAAEAQVLQEMWHF 244
              RP    +++ E    
Sbjct: 254 ADSRPKFR-ELIIEFSKM 270

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 4e-15
 Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 43/249 (17%)

Query: 13  KLAREIYRYKHLS-HPNIIPIYKT----MISQRQLFYAEIACMIGSLDSIMTYRPLNSPA 67
           K  RE+  +   S  P+I+ I          ++ L         G L S +         
Sbjct: 50  KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI--------- 100

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNW 127
                  +R     T    +   K   + + YL    + H+++   ++L+     +    
Sbjct: 101 ------QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 154

Query: 128 ISS--------------SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
           ++               +   T +  APEV   G + Y    D+W +G+      CG  P
Sbjct: 155 LTDFGFAKETTSHNSLTTPCYTPYYVAPEV--LGPEKYDKSCDMWSLGVIMYILLCGYPP 212

Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
                 L I   M  +      +++   E        +S+    +++  L  +P +R   
Sbjct: 213 FYSNHGLAISPGMKTR------IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 266

Query: 234 EAQVLQEMW 242
             + +   W
Sbjct: 267 T-EFMNHPW 274

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 7e-15
 Identities = 42/255 (16%), Positives = 96/255 (37%), Gaps = 47/255 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
                       K  +E    +   HP+I+ +   +         E+ C +G L S +  
Sbjct: 42  TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMEL-CTLGELRSFL-- 98

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-- 118
                            +Y + +  L +   +    L+YL+ +   H++I+A ++L +  
Sbjct: 99  --------------QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN 144

Query: 119 -----------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQF 167
                       + +D+  + +S   +     APE +NF    ++  SD+W+ G+   + 
Sbjct: 145 DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR--RFTSASDVWMFGVCMWEI 202

Query: 168 PCGG-LPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
              G  P    ++ D++ ++   +     L + PN              ++++  C A D
Sbjct: 203 LMHGVKPFQGVKNNDVIGRIENGER----LPMPPN---------CPPTLYSLMTKCWAYD 249

Query: 227 PAKRPAAEAQVLQEM 241
           P++RP    ++  ++
Sbjct: 250 PSRRPRFT-ELKAQL 263

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 8e-15
 Identities = 44/269 (16%), Positives = 84/269 (31%), Gaps = 42/269 (15%)

Query: 1   VIDINHQAEEYAK-LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
            +    Q+  +AK   RE+   KH+ H N+I +       R L       ++  L     
Sbjct: 50  KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 109

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI 119
                                +T D +     + L+GL Y+    + H+++   ++  N 
Sbjct: 110 NNI-------------VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156

Query: 120 FND---------DTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
             +            +   +    T W  APE++     +Y+   DIW +G    +   G
Sbjct: 157 DCELKILDFGLARHTDDEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTG 215

Query: 171 GLPVSRRQDLDIMTKMLMKQPKST-----------------SLQVAPNEDTTHGTRTLSK 213
                    +D +  +L                        SL   P  +  +     + 
Sbjct: 216 RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP 275

Query: 214 NFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
              ++++  L  D  KR  A  Q L   +
Sbjct: 276 LAVDLLEKMLVLDSDKRITAA-QALAHAY 303

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (170), Expect = 8e-15
 Identities = 44/270 (16%), Positives = 87/270 (32%), Gaps = 46/270 (17%)

Query: 1   VIDINHQAEEYAK-LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
            + ++   E       REI   K L H NI+ ++  + S ++L      C         +
Sbjct: 34  RVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS 93

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL--- 116
                 P   +  +                  + LKGL +     + H+++   ++L   
Sbjct: 94  CNGDLDPEIVKSFL-----------------FQLLKGLGFCHSRNVLHRDLKPQNLLINR 136

Query: 117 ---HNIFNDDTRNWISSSSS-----ITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFP 168
                + N                 + T    P  V FG   YS   D+W  G    +  
Sbjct: 137 NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196

Query: 169 CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPN----------------EDTTHGTRTLS 212
             G P+    D+D   K + +   + + +  P+                    +    L+
Sbjct: 197 NAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN 256

Query: 213 KNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
               ++++  L  +P +R +AE + LQ  +
Sbjct: 257 ATGRDLLQNLLKCNPVQRISAE-EALQHPY 285

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 69.7 bits (170), Expect = 9e-15
 Identities = 46/253 (18%), Positives = 83/253 (32%), Gaps = 50/253 (19%)

Query: 9   EEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPA 67
           E      +E+   + +S HPNII +  T  +    F        G L   +T +   S  
Sbjct: 51  ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 110

Query: 68  ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNW 127
            T+ IM                 +  L+ +  L    + H+++   +IL    +DD    
Sbjct: 111 ETRKIM-----------------RALLEVICALHKLNIVHRDLKPENIL---LDDDMNIK 150

Query: 128 IS--------------SSSSITTWAAAPEVV----NFGDDYYSCKSDIWLIGITALQFPC 169
           ++                   T    APE++    N     Y  + D+W  G+       
Sbjct: 151 LTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 210

Query: 170 GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK 229
           G  P   R+ + ++  ++    +  S +              S    ++V   L   P K
Sbjct: 211 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD----------YSDTVKDLVSRFLVVQPQK 260

Query: 230 RPAAEAQVLQEMW 242
           R  AE + L   +
Sbjct: 261 RYTAE-EALAHPF 272

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 9e-15
 Identities = 39/256 (15%), Positives = 79/256 (30%), Gaps = 45/256 (17%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
              + +      + RE+   K + HPN+I +++   ++  +              I+   
Sbjct: 48  TKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL------------ILELV 95

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN 121
                   +L      +  +T +      K+ L G+ YL    + H ++   +I+    N
Sbjct: 96  A-----GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN 150

Query: 122 DDTRNWISSSSSI---------------TTWAAAPEVVNFGDDYYSCKSDIWLIGITALQ 166
                       +               T    APE+VN+       ++D+W IG+    
Sbjct: 151 VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYI 208

Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
              G  P       + +  +     +      +            S    + ++  L  D
Sbjct: 209 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFS----------NTSALAKDFIRRLLVKD 258

Query: 227 PAKRPAAEAQVLQEMW 242
           P KR   +   LQ  W
Sbjct: 259 PKKRMTIQ-DSLQHPW 273

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 1e-14
 Identities = 40/250 (16%), Positives = 79/250 (31%), Gaps = 48/250 (19%)

Query: 7   QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSP 66
           +  +   + RE      L HP  + +Y T     +L++       G L   +        
Sbjct: 48  KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 107

Query: 67  AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-------- 118
             T+                     E +  L YL G+G+ H+++   +IL N        
Sbjct: 108 TCTRFYT-----------------AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQIT 150

Query: 119 ------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
                 + + +++   ++S   T    +PE++   +      SD+W +G    Q   G  
Sbjct: 151 DFGTAKVLSPESKQARANSFVGTAQYVSPELLT--EKSACKSSDLWALGCIIYQLVAGLP 208

Query: 173 PVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
           P     +  I  K++  +                          ++V+  L  D  KR  
Sbjct: 209 PFRAGNEYLIFQKIIKLEYDFPE--------------KFFPKARDLVEKLLVLDATKRLG 254

Query: 233 AEAQVLQEMW 242
            E ++     
Sbjct: 255 CE-EMEGYGP 263

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.4 bits (169), Expect = 1e-14
 Identities = 41/259 (15%), Positives = 78/259 (30%), Gaps = 50/259 (19%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            +   +  ++      E        HPN+I +   +     +         GSLDS +  
Sbjct: 61  TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-- 118

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL---- 116
                          ++    TV  L    +    G+ YL      H++++A +IL    
Sbjct: 119 --------------RQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN 164

Query: 117 ----------HNIFNDDTRNWISSSSS---ITTWAAAPEVVNFGDDYYSCKSDIWLIGIT 163
                          DDT +   +S+    I     APE + +    ++  SD+W  GI 
Sbjct: 165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR--KFTSASDVWSYGIV 222

Query: 164 ALQ-FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
             +    G  P     + D++  +         +                     ++  C
Sbjct: 223 MWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDC-------------PSALHQLMLDC 269

Query: 223 LAPDPAKRPAAEAQVLQEM 241
              D   RP    Q++  +
Sbjct: 270 WQKDRNHRPKF-GQIVNTL 287

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 1e-14
 Identities = 27/256 (10%), Positives = 75/256 (29%), Gaps = 38/256 (14%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDS-IMT 59
            ++      E  +   E    K  +  +++ +   +   +           G L S + +
Sbjct: 57  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 116

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNIS-------- 111
            RP  +        S      +          E   G++YL      H++++        
Sbjct: 117 LRPAMANNPVLAPPSLSKMIQM--------AGEIADGMAYLNANKFVHRDLAARNCMVAE 168

Query: 112 ------AGHILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITAL 165
                     +     +           +     +PE +  G   ++  SD+W  G+   
Sbjct: 169 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFGVVLW 226

Query: 166 QFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP 225
           +         +    + + + +M+          P+              + ++++C   
Sbjct: 227 EIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM------------LFELMRMCWQY 274

Query: 226 DPAKRPAAEAQVLQEM 241
           +P  RP+   +++  +
Sbjct: 275 NPKMRPSFL-EIISSI 289

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 2e-14
 Identities = 35/254 (13%), Positives = 77/254 (30%), Gaps = 37/254 (14%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN 75
           RE+   + L H NI+ +     S  +        ++      + Y P            +
Sbjct: 62  RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV------LDYVPETV--YRVARHYS 113

Query: 76  RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------IFNDD 123
           R +  + V  + +   +  + L+Y+   G+ H++I   ++L +                 
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173

Query: 124 TRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIM 183
            R   + S   + +  APE++ FG   Y+   D+W  G    +   G         +D +
Sbjct: 174 VRGEPNVSYICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232

Query: 184 TKML---------------MKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA 228
            +++                   +    Q+  +  T             +    L   P 
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 292

Query: 229 KRPAAEAQVLQEMW 242
            R     +     +
Sbjct: 293 ARLTPL-EACAHSF 305

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 68.2 bits (166), Expect = 5e-14
 Identities = 34/249 (13%), Positives = 71/249 (28%), Gaps = 39/249 (15%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
           I +             +        P I+ +     +  +L +       G L   ++  
Sbjct: 42  IKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH 101

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--- 118
            + S A  +                     E + GL ++    + ++++   +IL +   
Sbjct: 102 GVFSEADMRFYA-----------------AEIILGLEHMHNRFVVYRDLKPANILLDEHG 144

Query: 119 -------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGG 171
                      D       +S  T    APEV+      Y   +D + +G    +   G 
Sbjct: 145 HVRISDLGLACDFSKKKPHASVGTHGYMAPEVL-QKGVAYDSSADWFSLGCMLFKLLRGH 203

Query: 172 LPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
            P  + +  D      M    +  L             + S    ++++  L  D  +R 
Sbjct: 204 SPFRQHKTKDKHEIDRMTLTMAVELP-----------DSFSPELRSLLEGLLQRDVNRRL 252

Query: 232 AAEAQVLQE 240
               +  QE
Sbjct: 253 GCLGRGAQE 261

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 67.2 bits (163), Expect = 7e-14
 Identities = 45/272 (16%), Positives = 85/272 (31%), Gaps = 51/272 (18%)

Query: 1   VIDINHQAEEYAK-LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
            I +  + E       REI   K L H NI+ +Y  + ++++L              +  
Sbjct: 33  KIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD- 91

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN- 118
                               G+          + L G++Y     + H+++   ++L N 
Sbjct: 92  ----------------VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR 135

Query: 119 -------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITAL 165
                         F    R +      +T W  AP+V+  G   YS   DIW +G    
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEI--VTLWYRAPDVL-MGSKKYSTTIDIWSVGCIFA 192

Query: 166 QFPCGGLPVSRRQDLDIMTKMLMKQPKSTS---------------LQVAPNEDTTHGTRT 210
           +   G        + D + ++        S                 V          + 
Sbjct: 193 EMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKG 252

Query: 211 LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
           L ++  +++   L  DP +R  A+ Q L+  +
Sbjct: 253 LDESGIDLLSKMLKLDPNQRITAK-QALEHAY 283

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 1e-13
 Identities = 38/253 (15%), Positives = 81/253 (32%), Gaps = 41/253 (16%)

Query: 3   DINHQAEEYAKLAREIYRYKHLSH-PNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
            I  +A+       E    +H+   P ++ ++    ++ +L         G L + +   
Sbjct: 64  TIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL--- 120

Query: 62  PLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--- 118
                           R   T   + I   E +  L +L   G+ +++I   +IL +   
Sbjct: 121 --------------SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG 166

Query: 119 ----------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFP 168
                               +     T    AP++V  GD  +    D W +G+   +  
Sbjct: 167 HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 226

Query: 169 CGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA 228
            G  P +   + +   ++  +  KS               + +S    ++++  L  DP 
Sbjct: 227 TGASPFTVDGEKNSQAEISRRILKSEPPY----------PQEMSALAKDLIQRLLMKDPK 276

Query: 229 KRPAAEAQVLQEM 241
           KR     +   E+
Sbjct: 277 KRLGCGPRDADEI 289

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 1e-13
 Identities = 43/270 (15%), Positives = 84/270 (31%), Gaps = 43/270 (15%)

Query: 4   INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMT 59
            + + E       EIY+   L H NI+              QL+        GSL   + 
Sbjct: 34  FSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN 93

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL--- 116
              +      +L +S       T   LA  H E    +       + H+++ + +IL   
Sbjct: 94  RYTVTVEGMIKLALS-------TASGLAHLHME---IVGTQGKPAIAHRDLKSKNILVKK 143

Query: 117 -------------HNIFNDDTRNWISSSSSITTWAAAPEV----VNFGDDYYSCKSDIWL 159
                         +    DT +   +    T    APEV    +N        ++DI+ 
Sbjct: 144 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYA 203

Query: 160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL--------QVAPNEDTTHGTRTL 211
           +G+   +           +D  +    L+    S           ++ PN      +   
Sbjct: 204 MGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEA 263

Query: 212 SKNFWNMVKICLAPDPAKRPAAEAQVLQEM 241
            +    +++ C   + A R  A  ++ + +
Sbjct: 264 LRVMAKIMRECWYANGAARLTAL-RIKKTL 292

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 1e-13
 Identities = 31/254 (12%), Positives = 71/254 (27%), Gaps = 44/254 (17%)

Query: 4   INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPL 63
           +           +E    K L H  ++ +Y                    +  +  Y   
Sbjct: 49  LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-------------VVSEEPIYIVTEYMSK 95

Query: 64  NSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN----- 118
            S       +       + +  L     +   G++Y++     H+++ A +IL       
Sbjct: 96  GS---LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC 152

Query: 119 --------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
                      +D        +       APE   +G   ++ KSD+W  GI   +    
Sbjct: 153 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTK 210

Query: 171 GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
           G           +   + +  +                    ++  +++  C   +P +R
Sbjct: 211 GRVPYPGMVNREVLDQVERGYRMPCPP------------ECPESLHDLMCQCWRKEPEER 258

Query: 231 PAAEAQVLQEMWHF 244
           P  E  +   +  +
Sbjct: 259 PTFE-YLQAFLEDY 271

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 2e-13
 Identities = 42/270 (15%), Positives = 89/270 (32%), Gaps = 42/270 (15%)

Query: 1   VIDINHQAEEYAKLA-REIYRYKHLS---HPNIIPIYKTMISQRQLFYAEIACMIGSLDS 56
            + +    E       RE+   +HL    HPN++ ++      R     ++  +   +D 
Sbjct: 40  RVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ 99

Query: 57  IMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
            +T             +      G+  + +     + L+GL +L    + H+++   +IL
Sbjct: 100 DLTT-----------YLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL 148

Query: 117 HN-----------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITAL 165
                        +    +     +S  +T W  APEV+      Y+   D+W +G    
Sbjct: 149 VTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS--SYATPVDLWSVGCIFA 206

Query: 166 QFPCGGLPVSRRQDLDIMTKML-------------MKQPKSTSLQVAPNEDTTHGTRTLS 212
           +            D+D + K+L                    +      +        + 
Sbjct: 207 EMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID 266

Query: 213 KNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
           +   +++  CL  +PAKR +A    L   +
Sbjct: 267 ELGKDLLLKCLTFNPAKRISAY-SALSHPY 295

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 2e-13
 Identities = 38/256 (14%), Positives = 77/256 (30%), Gaps = 46/256 (17%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            +   +  ++      E       SH NII +   +   + +         G+LD  +  
Sbjct: 43  TLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE 102

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-- 118
           +            S     G+     A           YL      H++++A +IL N  
Sbjct: 103 KDGE--------FSVLQLVGMLRGIAAGMK--------YLANMNYVHRDLAARNILVNSN 146

Query: 119 -------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITAL 165
                        + +D    + +S   I     APE +++        SD+W  GI   
Sbjct: 147 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT--SASDVWSFGIVMW 204

Query: 166 QFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAP 225
           +    G           + K +    +  +    P+              + ++  C   
Sbjct: 205 EVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSA------------IYQLMMQCWQQ 252

Query: 226 DPAKRPAAEAQVLQEM 241
           + A+RP   A ++  +
Sbjct: 253 ERARRPKF-ADIVSIL 267

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 3e-13
 Identities = 36/255 (14%), Positives = 81/255 (31%), Gaps = 53/255 (20%)

Query: 2   IDINHQAEEYAKLAREIYRYKHLS--HPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIM 58
           I    +     ++  E+   K +S     +I +              E    +  L   +
Sbjct: 42  ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI 101

Query: 59  TYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
           T R        +                     + L+ + +    G+ H++I   +IL +
Sbjct: 102 TERGALQEELARSFF-----------------WQVLEAVRHCHNCGVLHRDIKDENILID 144

Query: 119 IFNDD-----------TRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQF 167
           +   +            ++ + +    T   + PE +     Y+   + +W +GI     
Sbjct: 145 LNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR-YHRYHGRSAAVWSLGILLYDM 203

Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
            CG +P     D +I+   +  + +                  +S    ++++ CLA  P
Sbjct: 204 VCGDIP--FEHDEEIIRGQVFFRQR------------------VSSECQHLIRWCLALRP 243

Query: 228 AKRPAAEAQVLQEMW 242
           + RP  E ++    W
Sbjct: 244 SDRPTFE-EIQNHPW 257

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 3e-13
 Identities = 45/278 (16%), Positives = 81/278 (29%), Gaps = 56/278 (20%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDS 56
            I          +  REI       H NII I   + +    Q +  Y     M   L  
Sbjct: 40  KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYK 99

Query: 57  IMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
           ++  + L++      +                   + L+GL Y+    + H+++   ++L
Sbjct: 100 LLKTQHLSNDHICYFL------------------YQILRGLKYIHSANVLHRDLKPSNLL 141

Query: 117 HN---------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIG 161
            N                  D       +    T W  APE++      Y+   DIW +G
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVG 200

Query: 162 ITALQFPCGGLPVSRRQDLDIMTKML--MKQPKSTSLQVAPNEDTTHGTRT--------- 210
               +          +  LD +  +L  +  P    L    N    +   +         
Sbjct: 201 CILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPW 260

Query: 211 ------LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
                       +++   L  +P KR   E Q L   +
Sbjct: 261 NRLFPNADSKALDLLDKMLTFNPHKRIEVE-QALAHPY 297

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 4e-13
 Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 41/248 (16%)

Query: 3   DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
           ++    +E A    E    ++  HP +  +     +  +L +       G L   ++   
Sbjct: 41  EVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER 100

Query: 63  LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN---- 118
           + +    +                     E +  L YL    + +++I   +++ +    
Sbjct: 101 VFTEERARFYG-----------------AEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 143

Query: 119 ---IFNDDTRNWISSSSSITTWAAAPE---VVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
                    +  IS  +++ T+   PE        D+ Y    D W +G+   +  CG L
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203

Query: 173 PVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
           P   +    +   +LM++ +                RTLS    +++   L  DP +R  
Sbjct: 204 PFYNQDHERLFELILMEEIRF--------------PRTLSPEAKSLLAGLLKKDPKQRLG 249

Query: 233 AEAQVLQE 240
                 +E
Sbjct: 250 GGPSDAKE 257

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 7e-13
 Identities = 31/276 (11%), Positives = 80/276 (28%), Gaps = 44/276 (15%)

Query: 1   VIDINHQAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
            + + ++ E +   A REI   + L H N++ + +   ++   +        GS+  +  
Sbjct: 42  KVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR----CKGSIYLVFD 97

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN- 118
           +   +        + +      T+  +    +  L GL Y+    + H+++ A ++L   
Sbjct: 98  FCEHDL-----AGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR 152

Query: 119 --------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITA 164
                                     ++ + T    P  +  G+  Y    D+W  G   
Sbjct: 153 DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 212

Query: 165 LQFPCGGLPVSRRQDLDIMTKML------------------MKQPKSTSLQVAPNEDTTH 206
            +       +    +   +  +                   + +                
Sbjct: 213 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 272

Query: 207 GTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
                     +++   L  DPA+R  ++   L   +
Sbjct: 273 KAYVRDPYALDLIDKLLVLDPAQRIDSD-DALNHDF 307

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.3 bits (156), Expect = 1e-12
 Identities = 37/247 (14%), Positives = 76/247 (30%), Gaps = 42/247 (17%)

Query: 3   DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
           +I  + ++      E      ++HP II ++ T    +Q+F        G L S++    
Sbjct: 40  EIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ 99

Query: 63  LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL----HN 118
                  +                     E    L YL  + + ++++   +IL     +
Sbjct: 100 RFPNPVAKFYA-----------------AEVCLALEYLHSKDIIYRDLKPENILLDKNGH 142

Query: 119 IFNDDTRNWISSSSSITTWA-----AAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
           I   D            T        APEVV+     Y+   D W  GI   +   G  P
Sbjct: 143 IKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP--YNKSIDWWSFGILIYEMLAGYTP 200

Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
                 +    K+L  + +                   +++  +++   +  D ++R   
Sbjct: 201 FYDSNTMKTYEKILNAELRFPP--------------FFNEDVKDLLSRLITRDLSQRLGN 246

Query: 234 EAQVLQE 240
                ++
Sbjct: 247 LQNGTED 253

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.5 bits (151), Expect = 5e-12
 Identities = 29/244 (11%), Positives = 75/244 (30%), Gaps = 42/244 (17%)

Query: 7   QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSP 66
           + ++      E    + ++ P ++ +  +      L+        G + S +      S 
Sbjct: 81  KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140

Query: 67  AATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-------I 119
              +                     + +    YL    L ++++   ++L +        
Sbjct: 141 PHARFYA-----------------AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT 183

Query: 120 FNDDTRNWISSSSSIT--TWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRR 177
                +     + ++     A APE++      Y+   D W +G+   +   G  P    
Sbjct: 184 DFGFAKRVKGRTWTLCGTPEALAPEIIL--SKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241

Query: 178 QDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV 237
           Q + I  K++  + +  S                S +  ++++  L  D  KR       
Sbjct: 242 QPIQIYEKIVSGKVRFPS--------------HFSSDLKDLLRNLLQVDLTKRFGNLKNG 287

Query: 238 LQEM 241
           + ++
Sbjct: 288 VNDI 291

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 5e-11
 Identities = 36/257 (14%), Positives = 86/257 (33%), Gaps = 31/257 (12%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIM 58
           ++       E+  L  E+    H+ H   +       ++    L      C  G+L + +
Sbjct: 50  MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 109

Query: 59  TYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
                N     ++   + ++  +T++ L     +  KG+ +L      H++++A +IL +
Sbjct: 110 -RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 168

Query: 119 --------------IFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITA 164
                             D        + +     APE +   D  Y+ +SD+W  G+  
Sbjct: 169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQSDVWSFGVLL 226

Query: 165 LQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA 224
            +    G        +D      +K+                     +   +  +  C  
Sbjct: 227 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA-----------PDYTTPEMYQTMLDCWH 275

Query: 225 PDPAKRPAAEAQVLQEM 241
            +P++RP    ++++ +
Sbjct: 276 GEPSQRPTFS-ELVEHL 291

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 56.4 bits (135), Expect = 5e-10
 Identities = 37/267 (13%), Positives = 73/267 (27%), Gaps = 50/267 (18%)

Query: 1   VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
            I    +  +  +L  E   YK L+    IP       +       I  +  SL+ ++  
Sbjct: 34  AIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLL-- 91

Query: 61  RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
                         +      +V  +A+A K+ L  +  +  + L +++I   + L    
Sbjct: 92  --------------DLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRP 137

Query: 121 NDDTRNWI------------------------SSSSSITTWAAAPEVVNFGDDYYSCKSD 156
           N    N I                          + S T    +           S + D
Sbjct: 138 NSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGR--EQSRRDD 195

Query: 157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFW 216
           +  +G   + F  G       Q L   T     +      Q  P  +   G     + F+
Sbjct: 196 LEALGHVFMYFLRG---SLPWQGLKAATNKQKYERIGEKKQSTPLRELCAG---FPEEFY 249

Query: 217 NMVKICLAPDPAKRPAAEA--QVLQEM 241
             +           P  +    +  ++
Sbjct: 250 KYMHYARNLAFDATPDYDYLQGLFSKV 276

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 38/273 (13%), Positives = 77/273 (28%), Gaps = 61/273 (22%)

Query: 9   EEYAKLAREIYRYKHLS-HPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNS 65
            +  K+ REI   ++L   PNII +   +     R                +  Y+ L  
Sbjct: 71  VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL--YQTLTD 128

Query: 66  PAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----HNIF 120
                 +                   E LK L Y    G+ H+++   +++       + 
Sbjct: 129 YDIRFYM------------------YEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 170

Query: 121 NDD-------TRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
             D             +    + +   PE+       Y    D+W +G           P
Sbjct: 171 LIDWGLAEFYHPGQEYNVRVASRYFKGPEL-LVDYQMYDYSLDMWSLGCMLASMIFRKEP 229

Query: 174 -----VSRRQDLDIM----TKMLMKQPKSTSLQVAPNEDTTHGTRT-------------- 210
                 +  Q + I     T+ L       ++++ P  +   G  +              
Sbjct: 230 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQH 289

Query: 211 -LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
            +S    + +   L  D   R  A  + ++  +
Sbjct: 290 LVSPEALDFLDKLLRYDHQSRLTAR-EAMEHPY 321

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (114), Expect = 3e-07
 Identities = 42/282 (14%), Positives = 92/282 (32%), Gaps = 57/282 (20%)

Query: 1   VIDINHQAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMT 59
            +    Q + +AK A RE+   K ++H NII +      Q+ L   +   ++  L     
Sbjct: 49  KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 108

Query: 60  YRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAG------ 113
            +                +  +  + ++    + L G+ +L   G+ H+++         
Sbjct: 109 CQ--------------VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 154

Query: 114 -----HILHNIFNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFP 168
                 +   +      +++ +   +T +  APE        Y    DIW +G    +  
Sbjct: 155 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE--VILGMGYKENVDIWSVGCIMGEMV 212

Query: 169 CGGLPVSRRQDLDIMTKML-------------------------MKQPKSTSLQVAPNE- 202
              +    R  +D   K++                          K    T  ++ P+  
Sbjct: 213 RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSL 272

Query: 203 --DTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
               +   +  +    +++   L  DPAKR + +   LQ  +
Sbjct: 273 FPADSEHNKLKASQARDLLSKMLVIDPAKRISVD-DALQHPY 313

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.7 bits (99), Expect = 2e-05
 Identities = 38/277 (13%), Positives = 73/277 (26%), Gaps = 54/277 (19%)

Query: 16  REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN 75
            EI   + ++  +         +              +   ++    +       LI   
Sbjct: 58  DEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY 117

Query: 76  RHRYGITVDCLAIAHKETLKGLSYLQGE-GLFHKNISAGHIL---------------HNI 119
            HR    +    I+ +  L GL Y+    G+ H +I   ++L                ++
Sbjct: 118 EHRGIPLIYVKQISKQ-LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL 176

Query: 120 FNDDTRNWISSSSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQD 179
            N    +   ++S  T    +PEV+      + C +DIW       +   G       + 
Sbjct: 177 GNACWYDEHYTNSIQTREYRSPEVLLGAP--WGCGADIWSTACLIFELITGDFLFEPDEG 234

Query: 180 LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRT----------------------------- 210
                           L   P+    +G  T                             
Sbjct: 235 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY 294

Query: 211 -----LSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
                 +K   + +   L  DP KR  A   ++   W
Sbjct: 295 KFSKDEAKEISDFLSPMLQLDPRKRADAG-GLVNHPW 330

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	245
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.6
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.96
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.37
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	89.12
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	88.79

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-53  Score=327.51  Aligned_cols=211  Identities=17%  Similarity=0.211  Sum_probs=168.6

Q ss_pred             ccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            4 INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         4 ~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      +....+..+.+.+|+.++++++||||+++++++.+++..++||||+++|+|.+++..                 ...+++
T Consensus        40 ~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~-----------------~~~l~e  102 (271)
T d1nvra_          40 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-----------------DIGMPE  102 (271)
T ss_dssp             CC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT-----------------TTBCCH
T ss_pred             hhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhc-----------------CCCCCH
Confidence            344455667899999999999999999999999999999999999999999766642                 346899


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc------CCCCccccccccCceecCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI------SSSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~  149 (245)
                      ..+..++.|++.||.|||++||+||||||+|||++.        ||+++....      .....||+.|+|||++.+ ..
T Consensus       103 ~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~  181 (271)
T d1nvra_         103 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-RE  181 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHC-SS
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcC-CC
Confidence            999999999999999999999999999999999976        888765432      224568999999999986 23


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      .++.++|||||||++|+|++|+.||...................           ......+++++.++|.+||+.||++
T Consensus       182 ~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~-----------~~~~~~~s~~~~~li~~~L~~dP~~  250 (271)
T d1nvra_         182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-----------LNPWKKIDSAPLALLHKILVENPSA  250 (271)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTT-----------STTGGGSCHHHHHHHHHHSCSSTTT
T ss_pred             CCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC-----------CCccccCCHHHHHHHHHHcCCChhH
Confidence            34678999999999999999999998765543332222221100           0112567899999999999999999


Q ss_pred             CccHHHHhhccccc
Q 037274          230 RPAAEAQVLQEMWH  243 (245)
Q Consensus       230 Rpt~~~~l~~~~f~  243 (245)
                      |||++++++||||+
T Consensus       251 R~t~~eil~hpwf~  264 (271)
T d1nvra_         251 RITIPDIKKDRWYN  264 (271)
T ss_dssp             SCCHHHHTTCTTTT
T ss_pred             CcCHHHHhcCHhhC
Confidence            99999999999996

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-52  Score=324.04  Aligned_cols=204  Identities=23%  Similarity=0.330  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++|||||++++++.+++..|+||||+++|+|.+++.                  +..+++..+..+
T Consensus        60 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~------------------~~~l~~~~~~~i  121 (293)
T d1yhwa1          60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT------------------ETCMDEGQIAAV  121 (293)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH------------------HSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhh------------------ccCCCHHHHHHH
Confidence            45779999999999999999999999999999999999999999966553                  245899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.||+.||.|||++||+||||||+|||++.        ||++......    ....||+.|+|||.+.+  ..++.++||
T Consensus       122 ~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~Di  199 (293)
T d1yhwa1         122 CRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR--KAYGPKVDI  199 (293)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSS--SCBCTHHHH
T ss_pred             HHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChhhhcC--CCCCchhce
Confidence            999999999999999999999999999976        8887654322    24567999999999987  668999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      |||||++|+|++|..||.+.+................           ..+..+++++.++|.+||+.||.+|||+++++
T Consensus       200 wSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~-----------~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil  268 (293)
T d1yhwa1         200 WSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL-----------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELL  268 (293)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCC-----------SSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred             ehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC-----------CCcccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            9999999999999999998777666655544331110           11256889999999999999999999999999


Q ss_pred             hcccccc
Q 037274          238 LQEMWHF  244 (245)
Q Consensus       238 ~~~~f~~  244 (245)
                      +||||+.
T Consensus       269 ~Hp~~~~  275 (293)
T d1yhwa1         269 QHQFLKI  275 (293)
T ss_dssp             TCGGGGG
T ss_pred             cCHhhCC
Confidence            9999963

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-52  Score=321.07  Aligned_cols=201  Identities=17%  Similarity=0.224  Sum_probs=174.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+..+
T Consensus        49 ~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~-----------------~~~l~e~~~~~i  111 (263)
T d2j4za1          49 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----------------LSKFDEQRTATY  111 (263)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhh-----------------cCCCCHHHHHHH
Confidence            456789999999999999999999999999999999999999999776652                 346899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--CCccccccccCceecCCCCCCCchhhHHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--SSSITTWAAAPEVVNFGDDYYSCKSDIWL  159 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~Dvws  159 (245)
                      +.||+.||+|||++||+||||||+|||++.        ||++.......  ...||+.|+|||.+.+  ..++.++||||
T Consensus       112 ~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~--~~~~~~~DiwS  189 (263)
T d2j4za1         112 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG--RMHDEKVDLWS  189 (263)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTT--CCCCTTHHHHH
T ss_pred             HHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCcccCHHHHcC--CCCCchhhhhh
Confidence            999999999999999999999999999976        88876554332  3467999999999987  66899999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          160 IGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       160 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      |||++|+|++|+.||.+.+..+....+.....              ..+..+++++.++|.+||+.||.+|||++++++|
T Consensus       190 lGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--------------~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         190 LGVLCYEFLVGKPPFEANTYQETYKRISRVEF--------------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             HHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             HhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--------------CCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence            99999999999999998777666665543221              1124578999999999999999999999999999


Q ss_pred             cccc
Q 037274          240 EMWH  243 (245)
Q Consensus       240 ~~f~  243 (245)
                      |||.
T Consensus       256 p~~~  259 (263)
T d2j4za1         256 PWIT  259 (263)
T ss_dssp             HHHH
T ss_pred             cCcC
Confidence            9984

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-52  Score=319.16  Aligned_cols=206  Identities=17%  Similarity=0.257  Sum_probs=168.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      .....+.+.+|+++|++++|||||++++++.+    ++.+++||||+++|+|.+++..                 ...++
T Consensus        48 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~-----------------~~~~~  110 (270)
T d1t4ha_          48 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-----------------FKVMK  110 (270)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHH-----------------HSSCC
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhc-----------------ccccc
Confidence            45567789999999999999999999999865    3468999999999999777652                 34688


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCC--cccccCCCCceeccc---------ccCccccccC--CCCccccccccCceecCCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEG--LFHKNISAGHILHNI---------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~--ivH~dlkp~nil~~~---------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~  149 (245)
                      +..+..++.||+.||+|||+++  |+||||||+|||++.         ||+++.....  ....||+.|+|||++.+   
T Consensus       111 ~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~---  187 (270)
T d1t4ha_         111 IKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE---  187 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT---
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCccccCHHHhCC---
Confidence            9999999999999999999998  999999999999963         8887644332  24567999999999874   


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAK  229 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  229 (245)
                      .++.++|||||||++|+|++|+.||..................           ........++++.++|.+||+.||++
T Consensus       188 ~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~-----------~~~~~~~~~~~~~~li~~~l~~dp~~  256 (270)
T d1t4ha_         188 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK-----------PASFDKVAIPEVKEIIEGCIRQNKDE  256 (270)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-----------CGGGGGCCCHHHHHHHHHHSCSSGGG
T ss_pred             CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC-----------CcccCccCCHHHHHHHHHHccCCHhH
Confidence            4899999999999999999999999876554443333222111           01122557889999999999999999


Q ss_pred             CccHHHHhhccccc
Q 037274          230 RPAAEAQVLQEMWH  243 (245)
Q Consensus       230 Rpt~~~~l~~~~f~  243 (245)
                      |||++|+++||||+
T Consensus       257 R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         257 RYSIKDLLNHAFFQ  270 (270)
T ss_dssp             SCCHHHHHTSGGGC
T ss_pred             CcCHHHHhCCcccC
Confidence            99999999999996

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-52  Score=324.94  Aligned_cols=208  Identities=22%  Similarity=0.371  Sum_probs=179.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+++|++|+|||||++++++.+++..++|||||.+|+|..++.                 .+..+++..+
T Consensus        55 ~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~-----------------~~~~l~e~~~  117 (309)
T d1u5ra_          55 SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV-----------------HKKPLQEVEI  117 (309)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-----------------HTSCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHH-----------------hCCCCCHHHH
Confidence            45567789999999999999999999999999999999999999998854332                 1356899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCCCCccccccccCceecCC-CCCCCchhhH
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISSSSSITTWAAAPEVVNFG-DDYYSCKSDI  157 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv  157 (245)
                      ..++.||+.||.|||++||+||||||+|||++.        ||++..........||+.|+|||++.+. ...++.++||
T Consensus       118 ~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~Di  197 (309)
T d1u5ra_         118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDV  197 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccCccccCHHHHhccCCCCcCchhhh
Confidence            999999999999999999999999999999976        9999888777788899999999998752 3458999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      |||||++|+|++|..||.+.+..+....+.......            .....+|+++.++|.+||+.||.+|||+++++
T Consensus       198 wSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell  265 (309)
T d1u5ra_         198 WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL  265 (309)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC------------CSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             hhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC------------CCCCCCCHHHHHHHHHHCcCChhHCcCHHHHH
Confidence            999999999999999999877766665555432110            11155789999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +||||.
T Consensus       266 ~Hp~~~  271 (309)
T d1u5ra_         266 KHRFVL  271 (309)
T ss_dssp             TCHHHH
T ss_pred             hCHHhc
Confidence            999984

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.9e-52  Score=325.53  Aligned_cols=208  Identities=20%  Similarity=0.239  Sum_probs=162.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.+|++++||||+++++++.+++..++||||+++|+|.+++..                 ...+++..+
T Consensus        47 ~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~-----------------~~~l~e~~~  109 (307)
T d1a06a_          47 LEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE-----------------KGFYTERDA  109 (307)
T ss_dssp             --------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-----------------CSCCCHHHH
T ss_pred             hhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhc-----------------ccCCCHHHH
Confidence            344556788999999999999999999999999999999999999999777652                 356999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC---CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.||+.||+|||++|++||||||+||++..           ||+++......   ...||+.|+|||.+.+  ..++
T Consensus       110 ~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~--~~~~  187 (307)
T d1a06a_         110 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ--KPYS  187 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHTT--CCCC
T ss_pred             HHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcC--CCCC
Confidence            999999999999999999999999999999842           88876554332   4567999999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++|||||||++|+|++|..||.+.........+.......   .       ......+|+++.++|.+||+.||.+|||
T Consensus       188 ~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~---~-------~~~~~~~s~~~~~li~~~L~~dP~~R~s  257 (307)
T d1a06a_         188 KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF---D-------SPYWDDISDSAKDFIRHLMEKDPEKRFT  257 (307)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCC---C-------TTTTTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             cHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCC---C-------CccccCCCHHHHHHHHHHccCCHhHCcC
Confidence            99999999999999999999999877777666655433111   0       1112568899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++|+++||||.
T Consensus       258 ~~eil~hp~~~  268 (307)
T d1a06a_         258 CEQALQHPWIA  268 (307)
T ss_dssp             HHHHHHSTTTT
T ss_pred             HHHHhcCHhhC
Confidence            99999999995

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-52  Score=320.98  Aligned_cols=210  Identities=25%  Similarity=0.383  Sum_probs=176.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|++++++++|||||++++++.+++..++||||+++|+|.+++..                ....+++..+
T Consensus        49 ~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~----------------~~~~l~e~~~  112 (288)
T d2jfla1          49 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE----------------LERPLTESQI  112 (288)
T ss_dssp             SSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHH----------------HTSCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHh----------------cCCCCCHHHH
Confidence            345567899999999999999999999999999999999999999999766541                1356899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc----CCCCccccccccCceecC---CCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI----SSSSSITTWAAAPEVVNF---GDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~----~~~~~~~~~y~aPE~~~~---~~~~~  151 (245)
                      ..++.||+.||.|||++||+||||||+|||++.        ||++.....    .....||+.|+|||.+..   ....+
T Consensus       113 ~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y  192 (288)
T d2jfla1         113 QVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY  192 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSST
T ss_pred             HHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCC
Confidence            999999999999999999999999999999975        887754432    235678999999999853   13457


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|||||||++|+|++|..||.+.+..+....+.......           ...+..+++++.++|.+||+.||.+||
T Consensus       193 ~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~-----------~~~~~~~s~~~~~li~~~L~~dp~~R~  261 (288)
T d2jfla1         193 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT-----------LAQPSRWSSNFKDFLKKCLEKNVDARW  261 (288)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCC-----------CSSGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             ChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC-----------CCccccCCHHHHHHHHHHccCChhHCc
Confidence            899999999999999999999999888777776665443110           011256889999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      |++++++||||.
T Consensus       262 t~~ell~hp~~~  273 (288)
T d2jfla1         262 TTSQLLQHPFVT  273 (288)
T ss_dssp             CHHHHTTSGGGC
T ss_pred             CHHHHhcCcccC
Confidence            999999999995

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-51  Score=314.68  Aligned_cols=207  Identities=18%  Similarity=0.245  Sum_probs=164.1

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe--CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS--QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ++...+.+.+|++++++++|||||++++++.+  ++.+|+||||+++|+|.+++..             .......+++.
T Consensus        43 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~-------------~~~~~~~l~e~  109 (269)
T d2java1          43 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-------------GTKERQYLDEE  109 (269)
T ss_dssp             CHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHH-------------HHHHTCCCCHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHh-------------ccccCCCCCHH
Confidence            45567889999999999999999999999864  4568999999999999887752             11124679999


Q ss_pred             HHHHHHHHHHHHHHHHHhCC-----cccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCC
Q 037274           85 CLAIAHKETLKGLSYLQGEG-----LFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFG  147 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~-----ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~  147 (245)
                      .++.++.|++.||.|||+.|     |+||||||+|||++.        ||+++.....    ....||+.|+|||.+.+ 
T Consensus       110 ~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~-  188 (269)
T d2java1         110 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNR-  188 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTT-
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcC-
Confidence            99999999999999999876     999999999999986        7776544322    24567999999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                       ..++.++|||||||++|+|++|..||.+.+..+....+......             ..+..+|+++.++|.+||+.||
T Consensus       189 -~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~-------------~~~~~~s~~l~~li~~~L~~dp  254 (269)
T d2java1         189 -MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-------------RIPYRYSDELNEIITRMLNLKD  254 (269)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC-------------CCCTTSCHHHHHHHHHHTCSSG
T ss_pred             -CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-------------CCCcccCHHHHHHHHHHcCCCh
Confidence             66899999999999999999999999987776666655443211             1115688999999999999999


Q ss_pred             CCCccHHHHhhccc
Q 037274          228 AKRPAAEAQVLQEM  241 (245)
Q Consensus       228 ~~Rpt~~~~l~~~~  241 (245)
                      .+|||++++++|||
T Consensus       255 ~~Rps~~ell~hp~  268 (269)
T d2java1         255 YHRPSVEEILENPL  268 (269)
T ss_dssp             GGSCCHHHHHTSTT
T ss_pred             hHCcCHHHHHhCCc
Confidence            99999999999998

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-51  Score=324.90  Aligned_cols=220  Identities=20%  Similarity=0.293  Sum_probs=170.5

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      .......+.+.+|+++|++++|||||++++++.+++..++||||+++|+|.+++..                 ...+++.
T Consensus        42 ~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~-----------------~~~l~~~  104 (322)
T d1s9ja_          42 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-----------------AGRIPEQ  104 (322)
T ss_dssp             CCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHH-----------------HSSCCHH
T ss_pred             hhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhh-----------------cCCCCHH
Confidence            34455678899999999999999999999999999999999999999999777752                 2468999


Q ss_pred             HHHHHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------ccCcccccc--CCCCccccccccCceecCCCCCCCc
Q 037274           85 CLAIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------FNDDTRNWI--SSSSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------f~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      .+..++.|++.||.|||+ +||+||||||+|||++.        ||++.....  .....||+.|+|||++.+  ..++.
T Consensus       105 ~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~--~~y~~  182 (322)
T d1s9ja_         105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG--THYSV  182 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHC--SCCCT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccccCchHHcC--CCCCc
Confidence            999999999999999997 59999999999999976        888775433  235678999999999997  66999


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC-----------------CCC-------------CCCC
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL-----------------QVA-------------PNED  203 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~-------------~~~~  203 (245)
                      ++||||+||++|||++|+.||.+.+..................                 ...             ....
T Consensus       183 ~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (322)
T d1s9ja_         183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP  262 (322)
T ss_dssp             THHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCC
Confidence            9999999999999999999998755432211100000000000                 000             0000


Q ss_pred             CCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          204 TTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       204 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .......+|.++.++|.+||+.||.+|||++|+++||||+
T Consensus       263 ~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~  302 (322)
T d1s9ja_         263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  302 (322)
T ss_dssp             CCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             ccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhC
Confidence            0111234688999999999999999999999999999985

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-51  Score=317.20  Aligned_cols=201  Identities=20%  Similarity=0.280  Sum_probs=171.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++||||+++++++.+++..|+||||+++|+|.+++..                 ...+++..++.+
T Consensus        51 ~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~-----------------~~~l~e~~~~~~  113 (288)
T d1uu3a_          51 KVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-----------------IGSFDETCTRFY  113 (288)
T ss_dssp             CHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-----------------HSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhc-----------------cCCCCHHHHHHH
Confidence            456799999999999999999999999999999999999999999776642                 356899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCCCCCCCchh
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      +.|++.||+|||++||+||||||+|||++.        ||+++.....      ....||+.|+|||++.+  ..++.++
T Consensus       114 ~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~--~~~~~~~  191 (288)
T d1uu3a_         114 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE--KSACKSS  191 (288)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHT--CCCCHHH
T ss_pred             HHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeecc--CCCCccc
Confidence            999999999999999999999999999976        8887654322      23468999999999987  6689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA  235 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~  235 (245)
                      |||||||++|+|++|..||.+.+.......+.....     .         .+..+++++.++|.+||+.||.+|||++|
T Consensus       192 DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~-----~---------~p~~~s~~~~~li~~~L~~dP~~R~t~~e  257 (288)
T d1uu3a_         192 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----D---------FPEKFFPKARDLVEKLLVLDATKRLGCEE  257 (288)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC-----C---------CCTTCCHHHHHHHHTTSCSSGGGSTTSGG
T ss_pred             ceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCC-----C---------CCccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            999999999999999999998877777666553321     1         11457899999999999999999999987


Q ss_pred             ------Hhhccccc
Q 037274          236 ------QVLQEMWH  243 (245)
Q Consensus       236 ------~l~~~~f~  243 (245)
                            +++||||+
T Consensus       258 ~~~~~~i~~Hpff~  271 (288)
T d1uu3a_         258 MEGYGPLKAHPFFE  271 (288)
T ss_dssp             GTCHHHHHTSGGGT
T ss_pred             HcCCHHHHcCCccC
Confidence                  58899984

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.5e-50  Score=320.92  Aligned_cols=209  Identities=15%  Similarity=0.177  Sum_probs=177.5

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+++|++|+|||||++++++.+++..++||||+++|+|.+++..                ....+++..+
T Consensus        63 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~----------------~~~~l~e~~~  126 (350)
T d1koaa2          63 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD----------------EHNKMSEDEA  126 (350)
T ss_dssp             SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTC----------------TTSCBCHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHh----------------hcCCCCHHHH
Confidence            345667899999999999999999999999999999999999999999776642                1346999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccCC---CCccccccccCceecCCCCCCCc
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSC  153 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~  153 (245)
                      ..++.||+.||.|||++|++||||||+|||++.          ||++.......   ...||+.|+|||++.+  ..++.
T Consensus       127 ~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~--~~~~~  204 (350)
T d1koaa2         127 VEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG--KPVGY  204 (350)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHT--CCBCH
T ss_pred             HHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHcC--CCCCh
Confidence            999999999999999999999999999999852          88876554433   3566999999999987  66899


Q ss_pred             hhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          154 KSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       154 ~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      ++|||||||++|+|++|+.||.+.+..+....+........          ......+++++.+||.+||+.||++|||+
T Consensus       205 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~s~~~~~li~~~L~~dP~~R~t~  274 (350)
T d1koaa2         205 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD----------DSAFSGISEDGKDFIRKLLLADPNTRMTI  274 (350)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC----------CGGGGGCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             hHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----------cccccCCCHHHHHHHHHHccCChhHCcCH
Confidence            99999999999999999999998877777776654432110          11125678999999999999999999999


Q ss_pred             HHHhhccccc
Q 037274          234 EAQVLQEMWH  243 (245)
Q Consensus       234 ~~~l~~~~f~  243 (245)
                      +++++||||.
T Consensus       275 ~eil~hp~~~  284 (350)
T d1koaa2         275 HQALEHPWLT  284 (350)
T ss_dssp             HHHHHSTTTS
T ss_pred             HHHhcCcccC
Confidence            9999999985

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-51  Score=317.37  Aligned_cols=205  Identities=18%  Similarity=0.224  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+++|++|+|||||++++++.+++..++||||+++|+|.+++..                 ...+++..++.+
T Consensus        56 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~-----------------~~~l~~~~~~~~  118 (293)
T d1jksa_          56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE-----------------KESLTEEEATEF  118 (293)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-----------------HSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhcc-----------------ccccchhHHHHH
Confidence            467899999999999999999999999999999999999999999777752                 246899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc------------ccCccccccC---CCCccccccccCceecCCCCCCCch
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI------------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~------------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +.|++.||+|||+.|++||||||+||+++.            ||++......   ....+|+.|+|||.+.+  ..++.+
T Consensus       119 ~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~--~~~~~~  196 (293)
T d1jksa_         119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY--EPLGLE  196 (293)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTT--CCBCTH
T ss_pred             HHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcC--CCCCCc
Confidence            999999999999999999999999999864            7776654332   24567999999999987  668999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|||||||++|+|++|..||.+.+..+....+.......          .......+|+++.++|.+||+.||.+|||++
T Consensus       197 ~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~----------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~  266 (293)
T d1jksa_         197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF----------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQ  266 (293)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCC----------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             ccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC----------CchhcCCCCHHHHHHHHHHccCChhHCcCHH
Confidence            999999999999999999999887777666654432110          0111245789999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||+
T Consensus       267 eil~hp~~~  275 (293)
T d1jksa_         267 DSLQHPWIK  275 (293)
T ss_dssp             HHHHSTTTC
T ss_pred             HHhcCcccC
Confidence            999999996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.7e-50  Score=319.63  Aligned_cols=208  Identities=17%  Similarity=0.228  Sum_probs=176.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+.+|++|+|||||++++++.+++..++||||+++|+|.+++..                ....+++.+++
T Consensus        67 ~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~----------------~~~~l~e~~~~  130 (352)
T d1koba_          67 PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA----------------EDYKMSEAEVI  130 (352)
T ss_dssp             HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTC----------------TTCCBCHHHHH
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHh----------------cCCCCCHHHHH
Confidence            34567889999999999999999999999999999999999999999665532                23569999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccCC---CCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.||+.||.|||++||+||||||+|||++.          ||++.......   ...+|+.|+|||++.+  ..++.+
T Consensus       131 ~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  208 (352)
T d1koba_         131 NYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR--EPVGFY  208 (352)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTT--CCBCHH
T ss_pred             HHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcC--CCCCCc
Confidence            99999999999999999999999999999862          88877654433   3466999999999987  669999


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      +|||||||++|+|++|..||.+.+.......+........          ......+++++.+||.+||+.||.+|||++
T Consensus       209 ~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~  278 (352)
T d1koba_         209 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD----------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVH  278 (352)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC----------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             cchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----------cccccCCCHHHHHHHHHHccCChhHCcCHH
Confidence            9999999999999999999999887777766655432110          111256889999999999999999999999


Q ss_pred             HHhhccccc
Q 037274          235 AQVLQEMWH  243 (245)
Q Consensus       235 ~~l~~~~f~  243 (245)
                      ++++||||+
T Consensus       279 eil~Hp~~~  287 (352)
T d1koba_         279 DALEHPWLK  287 (352)
T ss_dssp             HHHTSTTTS
T ss_pred             HHhcCHhhC
Confidence            999999995

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-49  Score=312.38  Aligned_cols=201  Identities=19%  Similarity=0.241  Sum_probs=174.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+|++++||||+++++++.+++.+|+||||+++|+|.+++..                 ...+++..++.+
T Consensus        48 ~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~-----------------~~~~~e~~~~~~  110 (337)
T d1o6la_          48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-----------------ERVFTEERARFY  110 (337)
T ss_dssp             CHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhhc-----------------ccCCcHHHHHHH
Confidence            467789999999999999999999999999999999999999999776652                 356899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.||+.||.|||++||+||||||+|||++.        ||+++.....    ...+||+.|+|||++.+  ..++.++|+
T Consensus       111 ~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~--~~y~~~~Di  188 (337)
T d1o6la_         111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED--NDYGRAVDW  188 (337)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSS--SCBCTTHHH
T ss_pred             HHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccC--CCCChhhcc
Confidence            999999999999999999999999999976        8888754332    24567999999999987  668999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----  232 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----  232 (245)
                      |||||++|+|++|+.||.+.+.......+.....       .       .+..+|+++.+||++||+.||.+|++     
T Consensus       189 wSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~-------~-------~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~  254 (337)
T d1o6la_         189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------R-------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD  254 (337)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-------C-------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTT
T ss_pred             cchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCC-------C-------CCccCCHHHHHHHHhhccCCchhhccccccc
Confidence            9999999999999999999887776665554321       1       12568899999999999999999994     


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       255 ~~eil~Hp~f~  265 (337)
T d1o6la_         255 AKEVMEHRFFL  265 (337)
T ss_dssp             HHHHHTSGGGT
T ss_pred             HHHHHcCcccc
Confidence            89999999995

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.7e-49  Score=305.49  Aligned_cols=209  Identities=18%  Similarity=0.226  Sum_probs=176.5

Q ss_pred             HHHHHHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            8 AEEYAKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .+..+.+.+|+.++++|+ ||||+++++++.+++..|+||||+++|+|.+++..                 ...+++..+
T Consensus        50 ~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~-----------------~~~l~e~~~  112 (277)
T d1phka_          50 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-----------------KVTLSEKET  112 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HSSCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHh-----------------cCCCCHHHH
Confidence            345567899999999997 99999999999999999999999999999777752                 356899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecC----CCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNF----GDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~----~~~~~  151 (245)
                      ..++.||+.||+|||++||+||||||+||+++.        ||++......   ....||+.|+|||.+.+    ....+
T Consensus       113 ~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~  192 (277)
T d1phka_         113 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGY  192 (277)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCB
T ss_pred             HHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCC
Confidence            999999999999999999999999999999976        8887655432   24567999999999874    23457


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++||||+||++|+|++|+.||.+.+.......+.......          .......+|+++.+++.+||++||.+||
T Consensus       193 ~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~----------~~~~~~~~s~~~~~li~~~L~~~p~~R~  262 (277)
T d1phka_         193 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF----------GSPEWDDYSDTVKDLVSRFLVVQPQKRY  262 (277)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC----------CTTTGGGSCHHHHHHHHHHCCSSGGGSC
T ss_pred             CchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCC----------CCcccccCCHHHHHHHHHHccCChhHCc
Confidence            889999999999999999999999988777666665443110          0111256899999999999999999999


Q ss_pred             cHHHHhhccccc
Q 037274          232 AAEAQVLQEMWH  243 (245)
Q Consensus       232 t~~~~l~~~~f~  243 (245)
                      |++++++||||+
T Consensus       263 s~~eil~h~~~~  274 (277)
T d1phka_         263 TAEEALAHPFFQ  274 (277)
T ss_dssp             CHHHHTTSGGGC
T ss_pred             CHHHHHcCHHHH
Confidence            999999999996

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-50  Score=314.04  Aligned_cols=210  Identities=14%  Similarity=0.147  Sum_probs=176.7

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ........+.+|+++|++++||||+++++++.+++..|+|||||++|+|.+++..                .+..+++.+
T Consensus        40 ~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~----------------~~~~l~e~~  103 (321)
T d1tkia_          40 VKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT----------------SAFELNERE  103 (321)
T ss_dssp             CCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTS----------------SSCCCCHHH
T ss_pred             CCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHh----------------cCCCCCHHH
Confidence            3445566789999999999999999999999999999999999999999777652                134689999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc----------ccCccccccCC---CCccccccccCceecCCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI----------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~----------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +..++.||+.||.|||+.||+||||||+|||++.          ||++.......   ...+++.|+|||...+  ..++
T Consensus       104 ~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~--~~~~  181 (321)
T d1tkia_         104 IVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH--DVVS  181 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTT--CEEC
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccC--CCCC
Confidence            9999999999999999999999999999999863          77766544332   3345899999999987  6689


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++|||||||++|+|++|..||.+.+..+....+........          ......+++++.+||.+||..||.+|||
T Consensus       182 ~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~s~~~~~li~~~L~~dp~~R~s  251 (321)
T d1tkia_         182 TATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD----------EEAFKEISIEAMDFVDRLLVKERKSRMT  251 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----------HHHHTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             chhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----------hhhccCCCHHHHHHHHHHccCChhHCcC
Confidence            999999999999999999999999888777777665432111          0111457899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       252 ~~eil~hp~~~  262 (321)
T d1tkia_         252 ASEALQHPWLK  262 (321)
T ss_dssp             HHHHHHSHHHH
T ss_pred             HHHHhcCHhhc
Confidence            99999999984

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.3e-49  Score=308.17  Aligned_cols=201  Identities=18%  Similarity=0.194  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.++++++||||+++++++.+++..++||||+++|+|..++..                 ...+++..+..+
T Consensus        47 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~-----------------~~~~~~~~~~~~  109 (316)
T d1fota_          47 QVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK-----------------SQRFPNPVAKFY  109 (316)
T ss_dssp             CHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-----------------TSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCccccccccc-----------------cccccccHHHHH
Confidence            457799999999999999999999999999999999999999999666642                 456788889999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCchhhHHHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      +.||+.||.|||++||+||||||+|||++.        ||+++...... ...||+.|+|||.+.+  ..++.++|||||
T Consensus       110 ~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~--~~y~~~~DiwSl  187 (316)
T d1fota_         110 AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVST--KPYNKSIDWWSF  187 (316)
T ss_dssp             HHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTT--CCBCTTHHHHHH
T ss_pred             HHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccccccCcccccCHHHHcC--CCCCchhhcccc
Confidence            999999999999999999999999999976        88877654333 5668999999999987  668999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----cHHH
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----AAEA  235 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~  235 (245)
                      ||++|+|++|+.||.+.+..+....+.....     .         .+..+++++.+++.+||+.||.+|+     |+++
T Consensus       188 GvilyemltG~~Pf~~~~~~~~~~~i~~~~~-----~---------~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~  253 (316)
T d1fota_         188 GILIYEMLAGYTPFYDSNTMKTYEKILNAEL-----R---------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTED  253 (316)
T ss_dssp             HHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC-----C---------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHH
T ss_pred             chhHHHHHhCCCCCCCcCHHHHHHHHHcCCC-----C---------CCCCCCHHHHHHHHHHhhhCHHhccccchhhHHH
Confidence            9999999999999999887777766654321     1         1145789999999999999999996     8999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||+
T Consensus       254 il~Hp~f~  261 (316)
T d1fota_         254 VKNHPWFK  261 (316)
T ss_dssp             HHTSGGGS
T ss_pred             HHcCcccc
Confidence            99999995

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-49  Score=307.18  Aligned_cols=215  Identities=19%  Similarity=0.219  Sum_probs=172.4

Q ss_pred             HHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHH
Q 037274           11 YAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH   90 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (245)
                      .+.+.+|++++++++|||||++++++.+++..++||||+.++++..+..                 .+..+++..+..++
T Consensus        44 ~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~-----------------~~~~l~~~~~~~~~  106 (299)
T d1ua2a_          44 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD-----------------NSLVLTPSHIKAYM  106 (299)
T ss_dssp             CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTT-----------------CCSSCCSSHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhhhh-----------------cccCCCHHHHHHHH
Confidence            3568899999999999999999999999999999999999877744332                 24568899999999


Q ss_pred             HHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCchhhHH
Q 037274           91 KETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCKSDIW  158 (245)
Q Consensus        91 ~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~~Dvw  158 (245)
                      .||+.||+|||++|++||||||+|||++.        ||.+.......    ...+|+.|+|||.+.. ...++.++|||
T Consensus       107 ~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~Diw  185 (299)
T d1ua2a_         107 LMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFG-ARMYGVGVDMW  185 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTT-CSCCCHHHHHH
T ss_pred             HHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHcc-CCCCChhhhhh
Confidence            99999999999999999999999999976        88776544322    3457999999999875 34579999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCC--------------CCCCcccccHHHHHHHHHhcC
Q 037274          159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNED--------------TTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       159 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~  224 (245)
                      ||||++|+|++|..||.+.+..+.+..+............+....              ........++++.+|+.+||+
T Consensus       186 SlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~  265 (299)
T d1ua2a_         186 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFL  265 (299)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHC
T ss_pred             hcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHcc
Confidence            999999999999999999888887777655432111111000000              000113567899999999999


Q ss_pred             CCCCCCccHHHHhhccccc
Q 037274          225 PDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .||++|||++|+++||||+
T Consensus       266 ~dP~~R~sa~e~L~Hp~f~  284 (299)
T d1ua2a_         266 FNPCARITATQALKMKYFS  284 (299)
T ss_dssp             SSTTTSCCHHHHHTSGGGT
T ss_pred             CChhhCcCHHHHhCCHhhC
Confidence            9999999999999999996

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-48  Score=300.42  Aligned_cols=208  Identities=20%  Similarity=0.244  Sum_probs=166.8

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +.+..+.+.+|+.++++++|||||++++++ .++..++||||+++|+|.+++..                .+..+++..+
T Consensus        44 ~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~----------------~~~~~~~~~~  106 (276)
T d1uwha_          44 TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHI----------------IETKFEMIKL  106 (276)
T ss_dssp             CTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHHT----------------SCCCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeeeEEE-eccEEEEEEecCCCCCHHHHHhh----------------ccCCCCHHHH
Confidence            456778999999999999999999999986 45678999999999999777642                1346899999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCceecCC-CCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPEVVNFG-DDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE~~~~~-~~~~  151 (245)
                      ..++.||+.||+|||++||+||||||+|||++.        ||++......      ....||+.|+|||++.+. ...+
T Consensus       107 ~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~  186 (276)
T d1uwha_         107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY  186 (276)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCC
T ss_pred             HHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCC
Confidence            999999999999999999999999999999976        8887654322      134579999999998752 2458


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      +.++|||||||++|||+||+.||.+.+.................        .......+++++.+++.+||+.||.+||
T Consensus       187 ~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~~~~~l~~li~~cl~~dp~~RP  258 (276)
T d1uwha_         187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD--------LSKVRSNCPKAMKRLMAECLKKKRDERP  258 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC--------GGGSCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc--------chhccccchHHHHHHHHHHcCCCHhHCc
Confidence            99999999999999999999999987666555444433211110        1112256789999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |+.+++++
T Consensus       259 t~~~il~~  266 (276)
T d1uwha_         259 LFPQILAS  266 (276)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999876

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-49  Score=312.28  Aligned_cols=209  Identities=18%  Similarity=0.218  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHhhC-CCCCeeeEEEEEEe----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274           12 AKLAREIYRYKHL-SHPNIIPIYKTMIS----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus        12 ~~~~~E~~~l~~l-~h~~Iv~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +.+.+|+.++.++ +|||||++++++.+    ++.+|+|||||+||+|.+++..               .....+++..+
T Consensus        49 ~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~---------------~~~~~l~e~~~  113 (335)
T d2ozaa1          49 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD---------------RGDQAFTEREA  113 (335)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHS---------------CSCCCEEHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHh---------------cCCCCcCHHHH
Confidence            4577899987654 89999999999876    4568999999999999776642               22456999999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccC---CCCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +.++.||+.||+|||++||+||||||+|||++.           ||+++.....   ....||+.|+|||++.+  ..++
T Consensus       114 ~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~y~  191 (335)
T d2ozaa1         114 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP--EKYD  191 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCG--GGGS
T ss_pred             HHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHcC--CCCC
Confidence            999999999999999999999999999999864           8877644332   24567999999999987  6699


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA  232 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  232 (245)
                      .++|||||||++|+|+||+.||.+.+.......+......... ..     .......+|+++.+||.+||+.||++|||
T Consensus       192 ~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~-~~-----~~~~~~~~s~~~~~li~~~L~~dP~~R~s  265 (335)
T d2ozaa1         192 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY-EF-----PNPEWSEVSEEVKMLIRNLLKTEPTQRMT  265 (335)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSS-SC-----CTTHHHHSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCC-CC-----CCcccccCCHHHHHHHHHHccCChhHCcC
Confidence            9999999999999999999999876655544443333211110 11     11112467899999999999999999999


Q ss_pred             HHHHhhccccc
Q 037274          233 AEAQVLQEMWH  243 (245)
Q Consensus       233 ~~~~l~~~~f~  243 (245)
                      ++++++||||.
T Consensus       266 ~~eil~hp~~~  276 (335)
T d2ozaa1         266 ITEFMNHPWIM  276 (335)
T ss_dssp             HHHHHHSHHHH
T ss_pred             HHHHHcCHHhh
Confidence            99999999984

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.9e-48  Score=303.05  Aligned_cols=204  Identities=20%  Similarity=0.273  Sum_probs=164.3

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ....+..+.+.+|+++|++|+|||||+++|++..++..++||||+++|+|.+++..                ....+++.
T Consensus        65 ~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~----------------~~~~l~~~  128 (299)
T d1jpaa_          65 GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ----------------NDGQFTVI  128 (299)
T ss_dssp             SCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT----------------TTTCSCHH
T ss_pred             ccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeecc----------------ccCCCCHH
Confidence            34566778899999999999999999999999999999999999999999776642                23468999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---------CCccccccccCceecCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---------~~~~~~~y~aPE~~~~~  147 (245)
                      .+..++.||+.||+|||++|++||||||+|||++.        ||+++......         ...+|+.|+|||.+.+ 
T Consensus       129 ~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-  207 (299)
T d1jpaa_         129 QLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY-  207 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHS-
T ss_pred             HHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhc-
Confidence            99999999999999999999999999999999976        88876543222         1234889999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ..++.++|||||||++|||+| |..||.+.+..+....+....      ..+.       +..+++++.+++.+||+.|
T Consensus       208 -~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~------~~~~-------~~~~~~~l~~li~~cl~~~  273 (299)
T d1jpaa_         208 -RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY------RLPP-------PMDCPSALHQLMLDCWQKD  273 (299)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC------CCCC-------CTTCCHHHHHHHHHHTCSS
T ss_pred             -CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CCCC-------CccchHHHHHHHHHHcCCC
Confidence             569999999999999999998 899999887776666554432      1111       2568899999999999999


Q ss_pred             CCCCccHHHHhhc
Q 037274          227 PAKRPAAEAQVLQ  239 (245)
Q Consensus       227 p~~Rpt~~~~l~~  239 (245)
                      |.+|||+.++++.
T Consensus       274 P~~RPs~~ei~~~  286 (299)
T d1jpaa_         274 RNHRPKFGQIVNT  286 (299)
T ss_dssp             TTTSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999987653

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-48  Score=301.80  Aligned_cols=208  Identities=17%  Similarity=0.260  Sum_probs=170.9

Q ss_pred             ccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            4 INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         4 ~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ........+.+.+|+++|++++|||||+++|++.+ +..++||||+++|+|.+++..                .+..+++
T Consensus        46 ~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~----------------~~~~l~~  108 (285)
T d1u59a_          46 QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVG----------------KREEIPV  108 (285)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTT----------------CTTTSCH
T ss_pred             hhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhhc----------------cccCCCH
Confidence            34556778899999999999999999999999864 568999999999999776642                1356899


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~  148 (245)
                      ..+..++.||+.||+|||++|++||||||+||+++.        ||+++......       ...+|+.|+|||.+.+  
T Consensus       109 ~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--  186 (285)
T d1u59a_         109 SNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF--  186 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhC--
Confidence            999999999999999999999999999999999976        88876543322       3346889999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++|||||||++|||+| |..||.+.+..+....+....      ..       ..+..+++++.++|..||+.||
T Consensus       187 ~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~------~~-------~~p~~~~~~l~~li~~cl~~~p  253 (285)
T d1u59a_         187 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK------RM-------ECPPECPPELYALMSDCWIYKW  253 (285)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC------CC-------CCCTTCCHHHHHHHHHTTCSSG
T ss_pred             CCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------CC-------CCCCcCCHHHHHHHHHHcCCCH
Confidence            568999999999999999998 899999877766655554322      11       1125688999999999999999


Q ss_pred             CCCccHHHH---hhccccc
Q 037274          228 AKRPAAEAQ---VLQEMWH  243 (245)
Q Consensus       228 ~~Rpt~~~~---l~~~~f~  243 (245)
                      ++|||+.++   |+++|+.
T Consensus       254 ~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         254 EDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             GGSCCHHHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHHHHH
Confidence            999999887   5566653

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3e-48  Score=307.83  Aligned_cols=201  Identities=15%  Similarity=0.154  Sum_probs=174.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+++|++++||||+++++++.+.+..++|+|++.+|+|.+++..                 ...+++..++.+
T Consensus        84 ~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~-----------------~~~l~e~~~~~i  146 (350)
T d1rdqe_          84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-----------------IGRFSEPHARFY  146 (350)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccchhhhHhh-----------------cCCCCHHHHHHH
Confidence            456789999999999999999999999999999999999999999666542                 346899999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-CCCccccccccCceecCCCCCCCchhhHHHH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-SSSSITTWAAAPEVVNFGDDYYSCKSDIWLI  160 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~Dvwsl  160 (245)
                      +.||+.||.|||++||+||||||+|||++.        ||+++..... ....||+.|+|||++.+  ..++.++|||||
T Consensus       147 ~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~--~~~~~~~DiwSl  224 (350)
T d1rdqe_         147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILS--KGYNKAVDWWAL  224 (350)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTT--CCBCTHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCccccCCHHHHcC--CCCCccccccch
Confidence            999999999999999999999999999976        8888765433 34567999999999987  668999999999


Q ss_pred             HHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc-----cHHH
Q 037274          161 GITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP-----AAEA  235 (245)
Q Consensus       161 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~  235 (245)
                      ||++|+|++|..||.+.+.......+.....       .       .+..+++++.++|++||+.||.+|+     |+++
T Consensus       225 GvilyemltG~~Pf~~~~~~~~~~~i~~~~~-------~-------~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~e  290 (350)
T d1rdqe_         225 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-------R-------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND  290 (350)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-------C-------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHH
T ss_pred             hHHHHHHHhCCCCCCCcCHHHHHHHHhcCCC-------C-------CCccCCHHHHHHHHHHhhhCHHhccccccccHHH
Confidence            9999999999999998877776666654431       1       1156889999999999999999995     8999


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||+
T Consensus       291 ll~Hp~f~  298 (350)
T d1rdqe_         291 IKNHKWFA  298 (350)
T ss_dssp             HHTSGGGT
T ss_pred             HHcCcccc
Confidence            99999995

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.3e-48  Score=308.44  Aligned_cols=200  Identities=14%  Similarity=0.094  Sum_probs=164.3

Q ss_pred             HHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHHHHHHH
Q 037274           15 AREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETL   94 (245)
Q Consensus        15 ~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~   94 (245)
                      ..|+.+++.++|||||++++++.+++..|+||||+++|+|.+++..                 ...+++..++.++.||+
T Consensus        55 ~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~-----------------~~~~~e~~~~~~~~qi~  117 (364)
T d1omwa3          55 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-----------------HGVFSEADMRFYAAEII  117 (364)
T ss_dssp             HHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-----------------HCSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHh-----------------cccccHHHHHHHHHHHH
Confidence            3457777888999999999999999999999999999999777652                 35678999999999999


Q ss_pred             HHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--CCccccccccCceecCCCCCCCchhhHHHHHHHH
Q 037274           95 KGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--SSSITTWAAAPEVVNFGDDYYSCKSDIWLIGITA  164 (245)
Q Consensus        95 ~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~DvwslG~~l  164 (245)
                      .||.|||++|++||||||+|||++.        ||++.......  ...||+.|+|||.+.. ...++.++|||||||++
T Consensus       118 ~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~-~~~~~~~~DiwSlGvil  196 (364)
T d1omwa3         118 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQK-GVAYDSSADWFSLGCML  196 (364)
T ss_dssp             HHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHST-TCCCCTHHHHHHHHHHH
T ss_pred             HHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCcccccccccccchhHHhhc-CCCCCcccchhHHHHHH
Confidence            9999999999999999999999976        88876554332  4568999999999874 24689999999999999


Q ss_pred             HHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCcc-----HHHHhhc
Q 037274          165 LQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA-----AEAQVLQ  239 (245)
Q Consensus       165 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~~l~~  239 (245)
                      |+|++|+.||.+.................           ...+..+++++.++|.+||+.||.+|||     ++++++|
T Consensus       197 yemltG~~Pf~~~~~~~~~~~~~~~~~~~-----------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         197 FKLLRGHSPFRQHKTKDKHEIDRMTLTMA-----------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             HHHHHSSCSSCSSCSSCHHHHHHHSSSCC-----------CCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhcccCC-----------CCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            99999999998765444332222211111           0112568899999999999999999999     7999999


Q ss_pred             cccc
Q 037274          240 EMWH  243 (245)
Q Consensus       240 ~~f~  243 (245)
                      |||+
T Consensus       266 p~f~  269 (364)
T d1omwa3         266 PFFR  269 (364)
T ss_dssp             GGGT
T ss_pred             cccc
Confidence            9996

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-48  Score=301.46  Aligned_cols=202  Identities=15%  Similarity=0.262  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         8 ~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ....+.+.+|+++|++++|||||+++|++.+ +..++||||+++|+|.+++..                 ...+++..+.
T Consensus        49 ~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~~l~~-----------------~~~l~~~~~~  110 (277)
T d1xbba_          49 PALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQ-----------------NRHVKDKNII  110 (277)
T ss_dssp             CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHH-----------------CTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCCcHHHHHhh-----------------ccCCCHHHHH
Confidence            3456789999999999999999999999865 467899999999999776652                 3568999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCCC
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      .++.||+.||+|||++|++||||||+|||++.        ||+++......       ...+|+.|+|||.+.+  ..++
T Consensus       111 ~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~--~~~~  188 (277)
T d1xbba_         111 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY--YKFS  188 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHH--CEEE
T ss_pred             HHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcC--CCCC
Confidence            99999999999999999999999999999876        88876543222       2346899999999987  5689


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|||||||++|||++ |..||.+.+..+....+....      ..+       .+..+++++.+++.+||+.||++||
T Consensus       189 ~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~------~~~-------~p~~~~~~~~~li~~cl~~dp~~RP  255 (277)
T d1xbba_         189 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE------RMG-------CPAGCPREMYDLMNLCWTYDVENRP  255 (277)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC------CCC-------CCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             chhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCC------CCC-------CCcccCHHHHHHHHHHcCCCHhHCc
Confidence            99999999999999997 899999877666555544322      111       1256789999999999999999999


Q ss_pred             cHHHHh---hcccc
Q 037274          232 AAEAQV---LQEMW  242 (245)
Q Consensus       232 t~~~~l---~~~~f  242 (245)
                      |+++++   +++||
T Consensus       256 s~~~i~~~L~~~~~  269 (277)
T d1xbba_         256 GFAAVELRLRNYYY  269 (277)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhhCHHh
Confidence            999984   55554

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-48  Score=297.36  Aligned_cols=204  Identities=20%  Similarity=0.316  Sum_probs=161.2

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      .+.....+++.+|++++++++||||++++|++..++..++||||+++|+|.+++..                ....+++.
T Consensus        38 ~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~----------------~~~~~~~~  101 (263)
T d1sm2a_          38 REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT----------------QRGLFAAE  101 (263)
T ss_dssp             CSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT----------------TTTCCCHH
T ss_pred             CCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhc----------------cccCCCHH
Confidence            33444557899999999999999999999999999999999999999999776642                23568889


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      .+..++.|++.||.|||+++++||||||+|||++.        ||+++......     ...+|+.|+|||.+.+  ..+
T Consensus       102 ~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~  179 (263)
T d1sm2a_         102 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF--SRY  179 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHHHHTT--CCC
T ss_pred             HHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhcC--CCC
Confidence            99999999999999999999999999999999986        88776543322     2445899999999987  569


Q ss_pred             CchhhHHHHHHHHHHHhhC-CCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPCG-GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|||||||++|||+|+ .+||...+.......+....      ....       +...++++.+++.+||+.||++|
T Consensus       180 ~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~------~~~~-------p~~~~~~l~~li~~cl~~~p~~R  246 (263)
T d1sm2a_         180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF------RLYK-------PRLASTHVYQIMNHCWKERPEDR  246 (263)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTC------CCCC-------CTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             CchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcC------CCCC-------ccccCHHHHHHHHHHccCCHhHC
Confidence            9999999999999999995 56666655555555544332      1111       15578899999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      ||+++++++
T Consensus       247 ps~~~il~~  255 (263)
T d1sm2a_         247 PAFSRLLRQ  255 (263)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-48  Score=304.42  Aligned_cols=201  Identities=17%  Similarity=0.250  Sum_probs=170.4

Q ss_pred             HHHHHHHHHHHHh-hCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYK-HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~-~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+..|+.++. .++||||+++++++.+++..|+||||+++|+|.+++..                 ...+++..+..
T Consensus        45 ~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~-----------------~~~~~e~~~~~  107 (320)
T d1xjda_          45 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-----------------CHKFDLSRATF  107 (320)
T ss_dssp             CHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-----------------HSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhc-----------------cCCCCHHHHHH
Confidence            4556777777765 68999999999999999999999999999999777652                 34688999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhh
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSD  156 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~D  156 (245)
                      ++.||+.||.|||++|++||||||+|||++.        ||.++.....    ....||+.|+|||.+.+  ..++.++|
T Consensus       108 ~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D  185 (320)
T d1xjda_         108 YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG--QKYNHSVD  185 (320)
T ss_dssp             HHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTT--CCBCTHHH
T ss_pred             HHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcC--CCCCchhh
Confidence            9999999999999999999999999999976        7877644322    24567999999999987  66899999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH-H
Q 037274          157 IWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE-A  235 (245)
Q Consensus       157 vwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~  235 (245)
                      ||||||++|+|++|+.||.+.+.......+.....              ..+..+++++.++|++||+.||.+|||+. +
T Consensus       186 iwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~--------------~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~  251 (320)
T d1xjda_         186 WWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP--------------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGD  251 (320)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--------------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSC
T ss_pred             hhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------------CCCccCCHHHHHHHHHhcccCCCCCcCHHHH
Confidence            99999999999999999998877776666543321              11145789999999999999999999995 8


Q ss_pred             Hhhccccc
Q 037274          236 QVLQEMWH  243 (245)
Q Consensus       236 ~l~~~~f~  243 (245)
                      +++||||+
T Consensus       252 l~~hpff~  259 (320)
T d1xjda_         252 IRQHPLFR  259 (320)
T ss_dssp             GGGSGGGT
T ss_pred             HHhCchhc
Confidence            99999995

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.9e-48  Score=299.11  Aligned_cols=206  Identities=17%  Similarity=0.305  Sum_probs=167.2

Q ss_pred             ccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            4 INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         4 ~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      +..+....+++.+|+++|++++|||||++++++.+++..++||||+++|+|.+++.               ......+++
T Consensus        50 i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~---------------~~~~~~~~~  114 (287)
T d1opja_          50 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---------------ECNRQEVSA  114 (287)
T ss_dssp             CCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH---------------HSCTTTSCH
T ss_pred             ECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhh---------------hccccchHH
Confidence            33444456789999999999999999999999999999999999999999966654               223467899


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDY  150 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~  150 (245)
                      ..+..++.||+.||+|||++||+||||||+|||++.        ||+++......     ...+++.|+|||.+.+  ..
T Consensus       115 ~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~  192 (287)
T d1opja_         115 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY--NK  192 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHH--CC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcC--CC
Confidence            999999999999999999999999999999999976        88887554332     2235889999999987  56


Q ss_pred             CCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       151 ~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      ++.++|||||||++|||++|..||....+............     ..       ..+..+++++.+++.+||+.||.+|
T Consensus       193 ~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~-----~~-------~~~~~~~~~l~~li~~cl~~dP~~R  260 (287)
T d1opja_         193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-----RM-------ERPEGCPEKVYELMRACWQWNPSDR  260 (287)
T ss_dssp             CSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-----CC-------CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCC-----CC-------CCCccchHHHHHHHHHHcCCCHhHC
Confidence            89999999999999999997777665544444433332221     11       1125688999999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      ||++++++
T Consensus       261 ps~~ei~~  268 (287)
T d1opja_         261 PSFAEIHQ  268 (287)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999976

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-48  Score=304.55  Aligned_cols=219  Identities=18%  Similarity=0.217  Sum_probs=169.7

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHH------HhhhccCC
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQL------IMSNRHRY   79 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~------~~~~~~~~   79 (245)
                      .......+.+|+.+++++ +|||||++++++.+.+..++||||+++|+|.+++.............      ........
T Consensus        80 ~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (325)
T d1rjba_          80 DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN  159 (325)
T ss_dssp             ----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC--------------------
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccC
Confidence            445667899999999998 89999999999999999999999999999999987543221111000      01111234


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceec
Q 037274           80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVN  145 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~  145 (245)
                      .+++..++.++.||+.||+|||+++|+||||||+||+++.        ||+++......      ...+|+.|+|||.+.
T Consensus       160 ~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~  239 (325)
T d1rjba_         160 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF  239 (325)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHc
Confidence            5899999999999999999999999999999999999975        99887554433      334589999999998


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcC
Q 037274          146 FGDDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLA  224 (245)
Q Consensus       146 ~~~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  224 (245)
                      +  ..++.++|||||||++|||+| |..||.+.+.......+.....     ..+       .+..+++++.++|.+||+
T Consensus       240 ~--~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~-----~~~-------~p~~~~~~l~~li~~cl~  305 (325)
T d1rjba_         240 E--GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF-----KMD-------QPFYATEEIYIIMQSCWA  305 (325)
T ss_dssp             H--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTC-----CCC-------CCTTCCHHHHHHHHHHTC
T ss_pred             C--CCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC-----CCC-------CCCcCCHHHHHHHHHHcC
Confidence            7  669999999999999999997 8999988766666555544331     111       125678999999999999


Q ss_pred             CCCCCCccHHHHhhc
Q 037274          225 PDPAKRPAAEAQVLQ  239 (245)
Q Consensus       225 ~~p~~Rpt~~~~l~~  239 (245)
                      .||++|||++++++|
T Consensus       306 ~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         306 FDSRKRPSFPNLTSF  320 (325)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CChhHCcCHHHHHHH
Confidence            999999999999876

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-48  Score=298.92  Aligned_cols=208  Identities=16%  Similarity=0.322  Sum_probs=166.2

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      .......+.+.+|+.++++++|||||+++|++. ++..++||||+++|+|.+++..               .....+++.
T Consensus        46 ~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~~---------------~~~~~l~~~  109 (272)
T d1qpca_          46 KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKT---------------PSGIKLTIN  109 (272)
T ss_dssp             CTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTS---------------HHHHTCCHH
T ss_pred             ccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHHHhh---------------cCCCCCCHH
Confidence            334445678999999999999999999999874 5668999999999999765542               223458999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      .+..++.||+.||.|||+++|+||||||+|||++.        ||+++......     ...+|+.|+|||.+.+  ..+
T Consensus       110 ~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~  187 (272)
T d1qpca_         110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY--GTF  187 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHH--CEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhC--CCC
Confidence            99999999999999999999999999999999986        88886553322     3456889999999987  568


Q ss_pred             CchhhHHHHHHHHHHHhhCC-CCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPCGG-LPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|||||||++|||+||. +|+...+..+....+....      ...       .+..+++++.+++.+||+.||++|
T Consensus       188 ~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~------~~~-------~p~~~~~~l~~li~~cl~~~P~~R  254 (272)
T d1qpca_         188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY------RMV-------RPDNCPEELYQLMRLCWKERPEDR  254 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC------CCC-------CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC------CCC-------CcccChHHHHHHHHHHcCCCHhHC
Confidence            99999999999999999965 4555555555544443322      111       115678999999999999999999


Q ss_pred             ccHHHHhh--ccccc
Q 037274          231 PAAEAQVL--QEMWH  243 (245)
Q Consensus       231 pt~~~~l~--~~~f~  243 (245)
                      ||++++++  ++||.
T Consensus       255 pt~~ei~~~L~~~ft  269 (272)
T d1qpca_         255 PTFDYLRSVLEDFFT  269 (272)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHhhhhhh
Confidence            99999987  67773

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-47  Score=292.63  Aligned_cols=203  Identities=19%  Similarity=0.297  Sum_probs=170.0

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ++....+++.+|+.++++++||||++++|++.+++..++||||+++|+|.+++..                ....+++..
T Consensus        38 ~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~----------------~~~~~~~~~  101 (258)
T d1k2pa_          38 EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------------MRHRFQTQQ  101 (258)
T ss_dssp             SSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHS----------------GGGCCCHHH
T ss_pred             cCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhc----------------cccCCcHHH
Confidence            3344567899999999999999999999999999999999999999999766542                134678899


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCCC
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      +..++.|++.||.|||++|++||||||+||+++.        ||++.......     ...+|+.|+|||.+.+  ..++
T Consensus       102 ~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~  179 (258)
T d1k2pa_         102 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY--SKFS  179 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHH--CCCC
T ss_pred             HHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcC--CCCC
Confidence            9999999999999999999999999999999987        88776443322     2445889999999987  6689


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++||||||+++|||+| |+.||.+.+..+....+....      ....       +...++++.+++.+||+.||++||
T Consensus       180 ~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~------~~~~-------p~~~~~~l~~li~~cl~~dP~~RP  246 (258)
T d1k2pa_         180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL------RLYR-------PHLASEKVYTIMYSCWHEKADERP  246 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC------CCCC-------CTTCCHHHHHHHHHTTCSSGGGSC
T ss_pred             cceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCC------CCCC-------cccccHHHHHHHHHHccCCHhHCc
Confidence            99999999999999998 899999988777666554332      1111       256788999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |++++++|
T Consensus       247 t~~eil~~  254 (258)
T d1k2pa_         247 TFKILLSN  254 (258)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999986

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-47  Score=296.75  Aligned_cols=217  Identities=19%  Similarity=0.293  Sum_probs=169.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|++++++++|||||++++++.+++..++||||+.++.+ +++               .......+++..+..+
T Consensus        44 ~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~-~~~---------------~~~~~~~l~e~~~~~~  107 (298)
T d1gz8a_          44 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLK-KFM---------------DASALTGIPLPLIKSY  107 (298)
T ss_dssp             CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHH-HHH---------------HHTTTTCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCCchh-hhh---------------hhhcccCCCHHHHHHH
Confidence            367899999999999999999999999999999999999987544 222               1223466999999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.|++.||.|||++||+||||||+|||++.        ||.++.....    ....+|+.|+|||.+.. ...++.++|+
T Consensus       108 ~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~-~~~~~~~~Di  186 (298)
T d1gz8a_         108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG-CKYYSTAVDI  186 (298)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTT-CSSCCTHHHH
T ss_pred             HHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhcc-ccCCCccccc
Confidence            999999999999999999999999999975        7776544322    24467999999999875 3456899999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCC------CC---------CCCCCcccccHHHHHHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP------NE---------DTTHGTRTLSKNFWNMVKIC  222 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---------~~~~~~~~~~~~~~~li~~~  222 (245)
                      |||||++|+|++|+.||.+.+..+....+..............      ..         ........+++++.+|+.+|
T Consensus       187 wSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~m  266 (298)
T d1gz8a_         187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM  266 (298)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHH
T ss_pred             cccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHH
Confidence            9999999999999999998777766665544321111100000      00         00001135678999999999


Q ss_pred             cCCCCCCCccHHHHhhccccc
Q 037274          223 LAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       223 l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      |+.||++|||++|+++||||+
T Consensus       267 L~~dP~~R~t~~ell~H~ff~  287 (298)
T d1gz8a_         267 LHYDPNKRISAKAALAHPFFQ  287 (298)
T ss_dssp             TCSSTTTSCCHHHHHTSGGGT
T ss_pred             ccCChhHCcCHHHHhCCHhhc
Confidence            999999999999999999996

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.6e-47  Score=295.41  Aligned_cols=210  Identities=17%  Similarity=0.223  Sum_probs=164.2

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      .+.+..+.+.+|+++++.++||||+++++++..++    ..|+||||+++++|.+++..                 ...+
T Consensus        46 ~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~-----------------~~~l  108 (277)
T d1o6ya_          46 RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----------------EGPM  108 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHH-----------------HCSC
T ss_pred             cCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcc-----------------cCCC
Confidence            34567788999999999999999999999987654    38999999999999665542                 3568


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-------CCCCccccccccCceecC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-------SSSSSITTWAAAPEVVNF  146 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-------~~~~~~~~~y~aPE~~~~  146 (245)
                      ++..+..++.||+.||+|||++|++||||||+|||++.        ||.+.....       .....||+.|+|||.+.+
T Consensus       109 ~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~  188 (277)
T d1o6ya_         109 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG  188 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcC
Confidence            99999999999999999999999999999999999976        554432221       123457999999999987


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                        ..++.++|||||||++|+|+||..||.+.+..+.............          ......+|+++.++|.+||+.|
T Consensus       189 --~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~----------~~~~~~~s~~l~~li~~~L~~d  256 (277)
T d1o6ya_         189 --DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP----------SARHEGLSADLDAVVLKALAKN  256 (277)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCG----------GGTSSSCCHHHHHHHHHHTCSS
T ss_pred             --CCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCC----------chhccCCCHHHHHHHHHHccCC
Confidence              5689999999999999999999999998777666665554432111          1112568899999999999999


Q ss_pred             CCCCccHHHHhhcccccc
Q 037274          227 PAKRPAAEAQVLQEMWHF  244 (245)
Q Consensus       227 p~~Rpt~~~~l~~~~f~~  244 (245)
                      |.+||+..+.+.++|.+.
T Consensus       257 p~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         257 PENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             GGGSCSSHHHHHHHHHHH
T ss_pred             HhHCHhHHHHHHHHHHHH
Confidence            999996555666777654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6e-47  Score=293.67  Aligned_cols=216  Identities=19%  Similarity=0.226  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      ..+.+.+|+.+|++++||||+++++++.+++..+++++++.++++..+..                 ....+++..+..+
T Consensus        43 ~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~-----------------~~~~l~~~~~~~i  105 (286)
T d1ob3a_          43 IPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV-----------------CEGGLESVTAKSF  105 (286)
T ss_dssp             CCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHT-----------------STTCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHh-----------------hcCCcchhhhHHH
Confidence            46789999999999999999999999999999999999999877644333                 2467999999999


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC----CCCccccccccCceecCCCCCCCchhhH
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS----SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      +.||+.||.|||+.||+||||||+|||++.        ||.+......    ....+++.|+|||.+.+ ...++.++||
T Consensus       106 ~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~~Di  184 (286)
T d1ob3a_         106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG-SKKYSTTIDI  184 (286)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTT-CCSCCTHHHH
T ss_pred             HHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHHhC-CCCCCcceee
Confidence            999999999999999999999999999976        7766544332    23456899999999875 4567999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------CCCCCCCCCCCcccccHHHHHHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------QVAPNEDTTHGTRTLSKNFWNMVKIC  222 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~li~~~  222 (245)
                      |||||++|+|++|+.||.+.+..+....+..........               ....+..........++.+.+||++|
T Consensus       185 wslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~  264 (286)
T d1ob3a_         185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM  264 (286)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred             hhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHH
Confidence            999999999999999999877766666554322111100               00001111122356788999999999


Q ss_pred             cCCCCCCCccHHHHhhccccc
Q 037274          223 LAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       223 l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      |+.||++|||++|+++||||+
T Consensus       265 L~~dP~~R~s~~ell~Hp~f~  285 (286)
T d1ob3a_         265 LKLDPNQRITAKQALEHAYFK  285 (286)
T ss_dssp             TCSSTTTSCCHHHHHTSGGGG
T ss_pred             ccCChhHCcCHHHHhcCcccC
Confidence            999999999999999999996

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-46  Score=293.99  Aligned_cols=214  Identities=18%  Similarity=0.249  Sum_probs=166.9

Q ss_pred             HHHHHHHHHHhhC---CCCCeeeEEEEEEe-----CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274           12 AKLAREIYRYKHL---SHPNIIPIYKTMIS-----QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus        12 ~~~~~E~~~l~~l---~h~~Iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ..+.+|+.+++.|   +||||+++++++..     ....++++|++.++++....                ......+++
T Consensus        52 ~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~----------------~~~~~~~~~  115 (305)
T d1blxa_          52 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD----------------KVPEPGVPT  115 (305)
T ss_dssp             CTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHH----------------HSCTTCSCH
T ss_pred             HHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhh----------------hccCCCCCH
Confidence            3566788877766   79999999999853     34689999999987663222                223567899


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc---CCCCccccccccCceecCCCCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI---SSSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.++.|++.||+|||++||+||||||+|||++.        ||.+.....   .....||+.|+|||.+.+  ..++
T Consensus       116 ~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~--~~y~  193 (305)
T d1blxa_         116 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ--SSYA  193 (305)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTT--CCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcC--CCCC
Confidence            999999999999999999999999999999999976        666554332   235667999999999987  6799


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCC-------------CCCCCCCCCcccccHHHHHHH
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQV-------------APNEDTTHGTRTLSKNFWNMV  219 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~li  219 (245)
                      .++|||||||++|+|++|+.||.+.+..+....+............             .............++.+.+||
T Consensus       194 ~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli  273 (305)
T d1blxa_         194 TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLL  273 (305)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHH
T ss_pred             hhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHH
Confidence            9999999999999999999999998877777666543221111100             001111122356788999999


Q ss_pred             HHhcCCCCCCCccHHHHhhccccc
Q 037274          220 KICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       220 ~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+||+.||++|||++|+++||||+
T Consensus       274 ~~mL~~dP~~R~sa~e~L~Hpff~  297 (305)
T d1blxa_         274 LKCLTFNPAKRISAYSALSHPYFQ  297 (305)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHCcCChhHCcCHHHHhcChhhc
Confidence            999999999999999999999995

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-46  Score=288.99  Aligned_cols=203  Identities=19%  Similarity=0.385  Sum_probs=162.4

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ....+..+.+.+|++++++++||||++++|++. ++..++||||+++|+|.+++..                ....+++.
T Consensus        46 ~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~----------------~~~~l~~~  108 (273)
T d1mp8a_          46 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV----------------RKYSLDLA  108 (273)
T ss_dssp             TTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHH----------------TTTTSCHH
T ss_pred             ccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhc----------------cCCCCCHH
Confidence            345667788999999999999999999999985 5678999999999999665532                23568999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      .+..++.||+.||.|||++|++||||||+||+++.        ||+++......     ...+|+.|+|||.+.+  ..+
T Consensus       109 ~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~--~~~  186 (273)
T d1mp8a_         109 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRF  186 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHH--CCC
T ss_pred             HHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhcc--CCC
Confidence            99999999999999999999999999999999876        88776543222     3345899999999987  669


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++|||||||++|||++ |.+||.+.+..+....+.....      .+       .+..+++++.++|.+||+.||.+|
T Consensus       187 ~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~------~~-------~~~~~~~~~~~li~~cl~~dp~~R  253 (273)
T d1mp8a_         187 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER------LP-------MPPNCPPTLYSLMTKCWAYDPSRR  253 (273)
T ss_dssp             SHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC------CC-------CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC------CC-------CCCCCCHHHHHHHHHHcCCCHhHC
Confidence            999999999999999987 8999998887777766654321      11       125688999999999999999999


Q ss_pred             ccHHHHhhc
Q 037274          231 PAAEAQVLQ  239 (245)
Q Consensus       231 pt~~~~l~~  239 (245)
                      ||+++++++
T Consensus       254 ps~~ei~~~  262 (273)
T d1mp8a_         254 PRFTELKAQ  262 (273)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-46  Score=289.87  Aligned_cols=208  Identities=15%  Similarity=0.244  Sum_probs=163.2

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      .......+.+.+|+.++++++|||||+++|++. ++..++||||+++|+|.+++..               .....+++.
T Consensus        50 ~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~---------------~~~~~l~~~  113 (285)
T d1fmka3          50 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKG---------------ETGKYLRLP  113 (285)
T ss_dssp             CTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHSH---------------HHHTTCCHH
T ss_pred             CcccCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCCCchhhhhhh---------------cccccchHH
Confidence            334445578999999999999999999999984 5668999999999999766542               223568999


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-----CCccccccccCceecCCCCCC
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-----SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      .+..++.||+.||+|||++|++||||||+|||++.        ||++.......     ...+|+.|+|||.+..  ..+
T Consensus       114 ~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~  191 (285)
T d1fmka3         114 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY--GRF  191 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHH--CCC
T ss_pred             HHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhC--CCC
Confidence            99999999999999999999999999999999986        88776443222     2446899999999987  668


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCC-CCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPCGGLPV-SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|||++|..|+ ......+....+....      ..+       .+..+++++.+++.+||+.||++|
T Consensus       192 ~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~------~~~-------~~~~~~~~l~~li~~cl~~dP~~R  258 (285)
T d1fmka3         192 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY------RMP-------CPPECPESLHDLMCQCWRKEPEER  258 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC------CCC-------CCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             CcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC------CCC-------CCcccCHHHHHHHHHHcccCHhHC
Confidence            99999999999999999965554 5544444544443322      111       115678999999999999999999


Q ss_pred             ccHHHHhh--ccccc
Q 037274          231 PAAEAQVL--QEMWH  243 (245)
Q Consensus       231 pt~~~~l~--~~~f~  243 (245)
                      ||+++++.  ++||.
T Consensus       259 ps~~~i~~~L~~~~~  273 (285)
T d1fmka3         259 PTFEYLQAFLEDYFT  273 (285)
T ss_dssp             CCHHHHHHHHHTTTS
T ss_pred             cCHHHHHHHHhhhhc
Confidence            99999987  77773

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-46  Score=286.12  Aligned_cols=204  Identities=18%  Similarity=0.229  Sum_probs=161.2

Q ss_pred             ccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            4 INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         4 ~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ...+.+..+++.+|++++++++|||||+++|++.+.+..++++|++.++++.+++..                ....+++
T Consensus        46 ~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~----------------~~~~~~~  109 (283)
T d1mqba_          46 AGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE----------------KDGEFSV  109 (283)
T ss_dssp             TTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHH----------------TTTCSCH
T ss_pred             cccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhc----------------ccccccH
Confidence            344566777899999999999999999999999999999999999999999665532                2356889


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~  148 (245)
                      ..+..++.|++.||+|||+++|+||||||+|||++.        ||+++......       ...+|+.|+|||.+.+  
T Consensus       110 ~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--  187 (283)
T d1mqba_         110 LQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY--  187 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHS--
T ss_pred             HHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHcc--
Confidence            999999999999999999999999999999999986        88876543322       2345889999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhCCCCC-CCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCGGLPV-SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++|||||||++|||++|..|+ ...+..+....+....      ..+       .+..++.++.+++.+||+.||
T Consensus       188 ~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~------~~~-------~~~~~~~~l~~li~~cl~~~p  254 (283)
T d1mqba_         188 RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF------RLP-------TPMDCPSAIYQLMMQCWQQER  254 (283)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC------CCC-------CCTTCBHHHHHHHHHHTCSST
T ss_pred             CCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccC------CCC-------CchhhHHHHHHHHHHHCcCCH
Confidence            66999999999999999999966554 4444444444433222      111       125578999999999999999


Q ss_pred             CCCccHHHHhh
Q 037274          228 AKRPAAEAQVL  238 (245)
Q Consensus       228 ~~Rpt~~~~l~  238 (245)
                      ++|||+.++++
T Consensus       255 ~~RPt~~eil~  265 (283)
T d1mqba_         255 ARRPKFADIVS  265 (283)
T ss_dssp             TTSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-46  Score=288.78  Aligned_cols=194  Identities=18%  Similarity=0.281  Sum_probs=160.3

Q ss_pred             HHHHHHHHHHhhCC--CCCeeeEEEEEEeCceeEEEeeeccc-CCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           12 AKLAREIYRYKHLS--HPNIIPIYKTMISQRQLFYAEIACMI-GSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        12 ~~~~~E~~~l~~l~--h~~Iv~~~~~~~~~~~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+|+.++++++  ||||+++++++.+++..++|||++.+ +++.+++..                 ...+++..++.
T Consensus        52 ~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~-----------------~~~l~e~~~~~  114 (273)
T d1xwsa_          52 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-----------------RGALQEELARS  114 (273)
T ss_dssp             CEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHH-----------------HCSCCHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhc-----------------cCCCCHHHHHH
Confidence            44678999999997  89999999999999999999999975 577555531                 35689999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC--CCCccccccccCceecCCCCCCCchhhH
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS--SSSSITTWAAAPEVVNFGDDYYSCKSDI  157 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  157 (245)
                      ++.|++.||.|||++|++||||||+|||++.         ||++......  ....||+.|+|||.+.+ ...++.++||
T Consensus       115 ~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~-~~~~~~~~Di  193 (273)
T d1xwsa_         115 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY-HRYHGRSAAV  193 (273)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHH-SCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcC-CCCCCccccc
Confidence            9999999999999999999999999999973         8887644332  34567999999999986 2334678999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHh
Q 037274          158 WLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       158 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l  237 (245)
                      |||||++|+|++|+.||...+      .+....       .       ..+..+|+++.++|.+||+.||++|||++|++
T Consensus       194 wSlGvilyell~g~~Pf~~~~------~i~~~~-------~-------~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil  253 (273)
T d1xwsa_         194 WSLGILLYDMVCGDIPFEHDE------EIIRGQ-------V-------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ  253 (273)
T ss_dssp             HHHHHHHHHHHHSSCSCCSHH------HHHHCC-------C-------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ccceeeehhHhhCCCCCCCch------HHhhcc-------c-------CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHh
Confidence            999999999999999998621      111111       0       11256889999999999999999999999999


Q ss_pred             hccccc
Q 037274          238 LQEMWH  243 (245)
Q Consensus       238 ~~~~f~  243 (245)
                      +||||+
T Consensus       254 ~hp~~~  259 (273)
T d1xwsa_         254 NHPWMQ  259 (273)
T ss_dssp             TSGGGS
T ss_pred             cCHhhC
Confidence            999995

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-46  Score=285.85  Aligned_cols=204  Identities=20%  Similarity=0.316  Sum_probs=159.7

Q ss_pred             ccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe-CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            6 HQAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS-QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         6 ~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      +.+...+.+.+|++++++++||||++++|++.+ ++.+++||||+++|+|.+++..               .....+++.
T Consensus        39 ~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~---------------~~~~~l~~~  103 (262)
T d1byga_          39 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---------------RGRSVLGGD  103 (262)
T ss_dssp             CCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHH---------------HHHHHCCHH
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHh---------------cCCCCCCHH
Confidence            344566789999999999999999999999854 4668999999999999877752               112347899


Q ss_pred             HHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCCCchh
Q 037274           85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .+..++.||+.||.|||+.+++||||||+||+++.        ||.++...... ...+++.|+|||.+.+  ..++.++
T Consensus       104 ~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~--~~~t~~s  181 (262)
T d1byga_         104 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE--KKFSTKS  181 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHH--CCCCHHH
T ss_pred             HHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCccccccccCCChHHHhC--CCCChHH
Confidence            99999999999999999999999999999999986        77666533322 3455889999999987  5689999


Q ss_pred             hHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccHH
Q 037274          156 DIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE  234 (245)
Q Consensus       156 DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  234 (245)
                      ||||||+++|||+| |.+||...+..+....+....      ..       ..+..+++++.+++.+||+.||.+|||+.
T Consensus       182 DIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~------~~-------~~~~~~~~~~~~li~~cl~~dP~~Rps~~  248 (262)
T d1byga_         182 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY------KM-------DAPDGCPPAVYEVMKNCWHLDAAMRPSFL  248 (262)
T ss_dssp             HHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC------CC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC------CC-------CCCccCCHHHHHHHHHHcccCHhHCcCHH
Confidence            99999999999998 788888877777666654322      11       11255789999999999999999999999


Q ss_pred             HHhhc
Q 037274          235 AQVLQ  239 (245)
Q Consensus       235 ~~l~~  239 (245)
                      +++++
T Consensus       249 ~l~~~  253 (262)
T d1byga_         249 QLREQ  253 (262)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-45  Score=283.45  Aligned_cols=220  Identities=17%  Similarity=0.253  Sum_probs=172.0

Q ss_pred             cccccHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            3 DINHQAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         3 ~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      +.....+...++.+|+..+.++ +|||||++++++.+++..++||||+++|+|.+++............ .........+
T Consensus        54 ~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~-~~~~~~~~~l  132 (299)
T d1fgka_          54 KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY-NPSHNPEEQL  132 (299)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC-------------CCCC
T ss_pred             CcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCcccccc-ccccCccccC
Confidence            3455667788999999999888 7999999999999999999999999999999998754322111101 1111224568


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~  147 (245)
                      ++..++.++.|++.||+|||+.+++||||||+|||++.        ||.+.......      ...+++.|+|||.+.+ 
T Consensus       133 ~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~-  211 (299)
T d1fgka_         133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-  211 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcC-
Confidence            99999999999999999999999999999999999876        66665443322      2445889999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ..++.++||||||+++|||++ |.+||.+.+.......+....      ...       .+..+++++.++|.+||+.|
T Consensus       212 -~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~------~~~-------~p~~~~~~l~~li~~cl~~d  277 (299)
T d1fgka_         212 -RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH------RMD-------KPSNCTNELYMMMRDCWHAV  277 (299)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC------CCC-------CCSSCCHHHHHHHHHHTCSS
T ss_pred             -CCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCC------CCC-------CCccchHHHHHHHHHHccCC
Confidence             669999999999999999998 688888777665554443222      111       11567899999999999999


Q ss_pred             CCCCccHHHHhh
Q 037274          227 PAKRPAAEAQVL  238 (245)
Q Consensus       227 p~~Rpt~~~~l~  238 (245)
                      |.+|||+.++++
T Consensus       278 P~~Rps~~eil~  289 (299)
T d1fgka_         278 PSQRPTFKQLVE  289 (299)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-45  Score=290.10  Aligned_cols=217  Identities=19%  Similarity=0.276  Sum_probs=170.0

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc------eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR------QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      +....+.+.+|+++|++++|||||++++++...+      .+|+||||+. ++|..+++                  ...
T Consensus        57 ~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------------------~~~  117 (346)
T d1cm8a_          57 SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLMK------------------HEK  117 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCS-EEHHHHHH------------------HCC
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEeccc-ccHHHHHH------------------hcc
Confidence            4556788999999999999999999999997654      4799999994 47755443                  256


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-CCccccccccCceecCCCCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      +++..++.++.||+.||.|||++||+||||||+|||++.        ||.+....... ...+|+.|+|||.+.+ ...+
T Consensus       118 l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~-~~~~  196 (346)
T d1cm8a_         118 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILN-WMRY  196 (346)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHT-TTCC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCccccccccccccCHHHHcC-CCCC
Confidence            999999999999999999999999999999999999976        88776554433 3556999999999875 3557


Q ss_pred             CchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCcc-----------------CCCCCCCCCCCCcccccHH
Q 037274          152 SCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTS-----------------LQVAPNEDTTHGTRTLSKN  214 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~  214 (245)
                      +.++||||+||++|+|++|+.||.+.+.................                 ................+++
T Consensus       197 ~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  276 (346)
T d1cm8a_         197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPL  276 (346)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHH
T ss_pred             CccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHH
Confidence            89999999999999999999999987766655443332111000                 0000000111112457889


Q ss_pred             HHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          215 FWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       215 ~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +.+||.+||..||.+|||++++++||||+
T Consensus       277 ~~dli~~mL~~dP~~R~ta~eiL~Hp~f~  305 (346)
T d1cm8a_         277 AVNLLEKMLVLDAEQRVTAGEALAHPYFE  305 (346)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHSGGGT
T ss_pred             HHHHHHHHCcCChhHCcCHHHHhcChhhC
Confidence            99999999999999999999999999995

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-45  Score=288.95  Aligned_cols=215  Identities=15%  Similarity=0.164  Sum_probs=165.0

Q ss_pred             HHHHHHHHhhCCCCCeeeEEEEEEeC------ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274           14 LAREIYRYKHLSHPNIIPIYKTMISQ------RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus        14 ~~~E~~~l~~l~h~~Iv~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ..+|+++|++++||||+++++++...      ...++||||++++.+..+..              .......+++..++
T Consensus        60 ~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~--------------~~~~~~~l~~~~~~  125 (350)
T d1q5ka_          60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--------------YSRAKQTLPVIYVK  125 (350)
T ss_dssp             CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHH--------------HHHTTCCCCHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHh--------------hhhccCCCCHHHHH
Confidence            45799999999999999999998543      23789999998765433221              11234679999999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccCC---CCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.||+.||+|||++||+||||||+|||++.         ||++.......   ...+++.|+|||.+.+ ...++.++
T Consensus       126 ~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~  204 (350)
T d1q5ka_         126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG-ATDYTSSI  204 (350)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTT-CSSCCTHH
T ss_pred             HHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHhhc-ccCCCcce
Confidence            99999999999999999999999999999974         88776543322   4567999999998874 45689999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCC------------cc---CCCCCCCCCCCCcccccHHHHHHHH
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKS------------TS---LQVAPNEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~------------~~---~~~~~~~~~~~~~~~~~~~~~~li~  220 (245)
                      ||||+||++|+|++|..||...+..+.+..+.......            ..   ................++++.+|+.
T Consensus       205 DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~  284 (350)
T d1q5ka_         205 DVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCS  284 (350)
T ss_dssp             HHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHH
T ss_pred             eecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHH
Confidence            99999999999999999999877766665554321110            00   0011111111223457889999999


Q ss_pred             HhcCCCCCCCccHHHHhhccccc
Q 037274          221 ICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +||+.||.+|||+.|+++||||+
T Consensus       285 ~mL~~dP~~R~ta~e~L~Hp~f~  307 (350)
T d1q5ka_         285 RLLEYTPTARLTPLEACAHSFFD  307 (350)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             HHccCChhHCcCHHHHhcCHhhc
Confidence            99999999999999999999995

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-45  Score=287.15  Aligned_cols=201  Identities=16%  Similarity=0.264  Sum_probs=163.4

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      +.+..+.+.+|+.++++++|||||+++|++.++ ..+++++++.+|+|.+++..                ....+++..+
T Consensus        51 ~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~~~~~~----------------~~~~~~~~~~  113 (317)
T d1xkka_          51 SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVRE----------------HKDNIGSQYL  113 (317)
T ss_dssp             --CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTTCBHHHHHHH----------------TSSSCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEEeccCCcccccccc----------------cccCCCHHHH
Confidence            344577899999999999999999999999764 56788899999999665532                2456889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ..++.||+.||+|||++||+||||||+|||++.        ||++.......      ...+|+.|+|||.+.+  ..++
T Consensus       114 ~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~--~~~~  191 (317)
T d1xkka_         114 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH--RIYT  191 (317)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHH--CCCC
T ss_pred             HHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhc--CCCC
Confidence            999999999999999999999999999999976        88776543222      2345899999999987  5699


Q ss_pred             chhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc
Q 037274          153 CKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP  231 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  231 (245)
                      .++|||||||++|||+| |..||.+.+..+....+....      ..+.       +..+++++.+++.+||+.||.+||
T Consensus       192 ~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~------~~~~-------p~~~~~~~~~li~~cl~~dP~~RP  258 (317)
T d1xkka_         192 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE------RLPQ-------PPICTIDVYMIMVKCWMIDADSRP  258 (317)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC------CCCC-------CTTBCHHHHHHHHHHTCSSGGGSC
T ss_pred             hhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC------CCCC-------CcccCHHHHHHHHHhCCCChhhCc
Confidence            99999999999999998 788998877666655554332      1111       156789999999999999999999


Q ss_pred             cHHHHhhc
Q 037274          232 AAEAQVLQ  239 (245)
Q Consensus       232 t~~~~l~~  239 (245)
                      |+.++++|
T Consensus       259 s~~eil~~  266 (317)
T d1xkka_         259 KFRELIIE  266 (317)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999877

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-45  Score=280.97  Aligned_cols=201  Identities=20%  Similarity=0.307  Sum_probs=164.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      ..+..+.+.+|+.++++++||||++++|++.+ +..++|+||+++|++.+++..                ....+++..+
T Consensus        51 ~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~----------------~~~~l~~~~~  113 (273)
T d1u46a_          51 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRK----------------HQGHFLLGTL  113 (273)
T ss_dssp             -CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHH----------------HGGGSCHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeeeecCcchhhhhhc----------------ccCCCCHHHH
Confidence            44567889999999999999999999999965 567899999999999765541                1245889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC-------CCccccccccCceecCCCCCC
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS-------SSSITTWAAAPEVVNFGDDYY  151 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~  151 (245)
                      ..++.|++.||.|||++|++||||||+||+++.        ||++.......       ...+++.|+|||.+.+  ..+
T Consensus       114 ~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~  191 (273)
T d1u46a_         114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT--RTF  191 (273)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHH--CEE
T ss_pred             HHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhC--CCC
Confidence            999999999999999999999999999999876        88776543322       2234788999999987  668


Q ss_pred             CchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCC
Q 037274          152 SCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR  230 (245)
Q Consensus       152 ~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  230 (245)
                      +.++||||||+++|||+| |..||.+.+..+....+.......            ..+..+++++.++|.+||+.||++|
T Consensus       192 ~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~R  259 (273)
T d1u46a_         192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL------------PRPEDCPQDIYNVMVQCWAHKPEDR  259 (273)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC------------CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             CcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCC------------CCcccccHHHHHHHHHHcCCChhHC
Confidence            999999999999999998 899999888777766655432111            1125678999999999999999999


Q ss_pred             ccHHHHhh
Q 037274          231 PAAEAQVL  238 (245)
Q Consensus       231 pt~~~~l~  238 (245)
                      ||++++++
T Consensus       260 Pt~~ei~~  267 (273)
T d1u46a_         260 PTFVALRD  267 (273)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999864

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-45  Score=286.34  Aligned_cols=217  Identities=17%  Similarity=0.286  Sum_probs=168.9

Q ss_pred             cHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHH
Q 037274            7 QAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDC   85 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (245)
                      ..+..+.+.+|+++|+++ +|||||+++|++.+++..++||||+++|+|.+++.......... ...........+++..
T Consensus        50 ~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~  128 (309)
T d1fvra_          50 SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP-AFAIANSTASTLSSQQ  128 (309)
T ss_dssp             -----CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCH-HHHHHTTBSCSSCHHH
T ss_pred             ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccch-hhhccccccCCCCHHH
Confidence            445677899999999999 79999999999999999999999999999999987532211111 1112223456799999


Q ss_pred             HHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC---CCccccccccCceecCCCCCCCch
Q 037274           86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS---SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        86 ~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      +..++.||+.||.|+|+.+++||||||+|||++.        ||++.......   ...+|+.|+|||.+.+  ..++.+
T Consensus       129 ~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~  206 (309)
T d1fvra_         129 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY--SVYTTN  206 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHH--CEECHH
T ss_pred             HHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccccccceecCCcccchHHhcc--CCCCcc
Confidence            9999999999999999999999999999999775        88775444333   3346899999999987  568999


Q ss_pred             hhHHHHHHHHHHHhhCC-CCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCccH
Q 037274          155 SDIWLIGITALQFPCGG-LPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA  233 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~  233 (245)
                      +|||||||++|||++|. +||.+.+..+....+....      ..       ..+..+++++.++|.+||+.||++|||+
T Consensus       207 sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~------~~-------~~~~~~~~~~~~li~~cl~~dP~~RPs~  273 (309)
T d1fvra_         207 SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY------RL-------EKPLNCDDEVYDLMRQCWREKPYERPSF  273 (309)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC------CC-------CCCTTBCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             ceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcC------CC-------CCCccCCHHHHHHHHHHcCCChhHCcCH
Confidence            99999999999999976 5677766666555443321      11       1125688999999999999999999999


Q ss_pred             HHHhhc
Q 037274          234 EAQVLQ  239 (245)
Q Consensus       234 ~~~l~~  239 (245)
                      ++++++
T Consensus       274 ~eil~~  279 (309)
T d1fvra_         274 AQILVS  279 (309)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-44  Score=282.45  Aligned_cols=220  Identities=15%  Similarity=0.239  Sum_probs=171.4

Q ss_pred             ccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHH-------HHhhhc
Q 037274            4 INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQ-------LIMSNR   76 (245)
Q Consensus         4 ~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~-------~~~~~~   76 (245)
                      .....+..+++.+|++++++++||||+++++++.+.+..++++|++++|+|.+++............       ......
T Consensus        53 ~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  132 (301)
T d1lufa_          53 EEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP  132 (301)
T ss_dssp             TTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC--------------------
T ss_pred             hhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhcccc
Confidence            3455667888999999999999999999999999999999999999999999998654322111100       011122


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC------CCCccccccccCc
Q 037274           77 HRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS------SSSSITTWAAAPE  142 (245)
Q Consensus        77 ~~~~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~------~~~~~~~~y~aPE  142 (245)
                      ....+++..+..++.|++.||+|||+.+++||||||+|||++.        ||+++.....      ....+++.|+|||
T Consensus       133 ~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE  212 (301)
T d1lufa_         133 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE  212 (301)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHH
Confidence            3456899999999999999999999999999999999999987        8877543222      1345688999999


Q ss_pred             eecCCCCCCCchhhHHHHHHHHHHHhhCC-CCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHH
Q 037274          143 VVNFGDDYYSCKSDIWLIGITALQFPCGG-LPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKI  221 (245)
Q Consensus       143 ~~~~~~~~~~~~~DvwslG~~l~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  221 (245)
                      .+.+  ..++.++|||||||++|||++|. +||.+.+..+....+.....      .       ..+..+++++.+++.+
T Consensus       213 ~~~~--~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~------~-------~~p~~~~~~~~~li~~  277 (301)
T d1lufa_         213 SIFY--NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI------L-------ACPENCPLELYNLMRL  277 (301)
T ss_dssp             HHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC------C-------CCCTTCCHHHHHHHHH
T ss_pred             HHcc--CCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCC------C-------CCCccchHHHHHHHHH
Confidence            9997  66999999999999999999985 67887777666655543321      0       1125678999999999


Q ss_pred             hcCCCCCCCccHHHHhh
Q 037274          222 CLAPDPAKRPAAEAQVL  238 (245)
Q Consensus       222 ~l~~~p~~Rpt~~~~l~  238 (245)
                      ||+.||.+|||+.++++
T Consensus       278 cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         278 CWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HcCCChhHCcCHHHHHH
Confidence            99999999999999865

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=287.63  Aligned_cols=221  Identities=17%  Similarity=0.219  Sum_probs=168.0

Q ss_pred             ccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCC
Q 037274            4 INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY   79 (245)
Q Consensus         4 ~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~   79 (245)
                      ........+.+.+|+.+|++|+||||+++++++....    ..+++++++.+|+|.+++.                  ..
T Consensus        43 ~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~------------------~~  104 (345)
T d1pmea_          43 PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK------------------TQ  104 (345)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHH------------------HC
T ss_pred             hhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhh------------------cC
Confidence            3445667788999999999999999999999986643    2345556677889977664                  24


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC-------CCCccccccccCcee
Q 037274           80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS-------SSSSITTWAAAPEVV  144 (245)
Q Consensus        80 ~~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~-------~~~~~~~~y~aPE~~  144 (245)
                      .+++..++.++.|++.||+|||++||+||||||+|||++.        ||++......       ....+|+.|+|||.+
T Consensus       105 ~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l  184 (345)
T d1pmea_         105 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM  184 (345)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHh
Confidence            6899999999999999999999999999999999999976        7776543322       234568999999998


Q ss_pred             cCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC---------------CCCC--CCCCCCC
Q 037274          145 NFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL---------------QVAP--NEDTTHG  207 (245)
Q Consensus       145 ~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~--~~~~~~~  207 (245)
                      .. ...++.++||||+||++|+|++|+.||.+.+..+...............               ..+.  .......
T Consensus       185 ~~-~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (345)
T d1pmea_         185 LN-SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL  263 (345)
T ss_dssp             TT-BCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHH
T ss_pred             hc-CCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHh
Confidence            64 3567899999999999999999999998876655544433221110000               0000  0000011


Q ss_pred             cccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          208 TRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       208 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ....++++.+|+.+||+.||.+|||++++++||||.
T Consensus       264 ~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~  299 (345)
T d1pmea_         264 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE  299 (345)
T ss_dssp             CTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             CCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhc
Confidence            245678999999999999999999999999999986

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=285.01  Aligned_cols=216  Identities=14%  Similarity=0.168  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEe--------CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMIS--------QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      ..+.+.+|+++|++++||||+++++++..        ++..+++||++.++++.....                 ....+
T Consensus        52 ~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~-----------------~~~~~  114 (318)
T d3blha1          52 FPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN-----------------VLVKF  114 (318)
T ss_dssp             SCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTC-----------------TTCCC
T ss_pred             HHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhh-----------------ccccc
Confidence            45678899999999999999999999854        346899999999876633221                 24568


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc--------CCCCccccccccCceec
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI--------SSSSSITTWAAAPEVVN  145 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~--------~~~~~~~~~y~aPE~~~  145 (245)
                      ++..++.++.|++.||.|||++||+||||||+|||++.        ||++.....        .....+|+.|+|||.+.
T Consensus       115 ~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~  194 (318)
T d3blha1         115 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLL  194 (318)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHT
T ss_pred             ccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHc
Confidence            89999999999999999999999999999999999976        777653332        11345799999999987


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCC---C------CCCC---------
Q 037274          146 FGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNE---D------TTHG---------  207 (245)
Q Consensus       146 ~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~---------  207 (245)
                      + ...++.++|||||||++|+|++|+.||.+.++......+................   .      ....         
T Consensus       195 ~-~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (318)
T d3blha1         195 G-ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK  273 (318)
T ss_dssp             T-CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHH
T ss_pred             C-CCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhc
Confidence            5 3468999999999999999999999999877766655544432211110000000   0      0000         


Q ss_pred             cccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          208 TRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       208 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ....++.+.+||.+||+.||++|||++|+++||||+
T Consensus       274 ~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~  309 (318)
T d3blha1         274 AYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW  309 (318)
T ss_dssp             HHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGS
T ss_pred             cccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhc
Confidence            012366788999999999999999999999999996

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-44  Score=280.89  Aligned_cols=221  Identities=19%  Similarity=0.256  Sum_probs=171.1

Q ss_pred             ccccHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHH-HHhhhccCCCC
Q 037274            4 INHQAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQ-LIMSNRHRYGI   81 (245)
Q Consensus         4 ~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~   81 (245)
                      ..........+.+|+.+++++ +|||||++++++.+++..+++|||+++|+|.+++............ ..........+
T Consensus        63 ~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l  142 (311)
T d1t46a_          63 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL  142 (311)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCC
T ss_pred             cccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCC
Confidence            345566778899999999999 6999999999999999999999999999999998754332111111 11111234568


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~  147 (245)
                      ++..+..++.||+.||+|||+++++||||||+||+++.        ||.++......      ...+|+.|+|||.+.+ 
T Consensus       143 ~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  221 (311)
T d1t46a_         143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN-  221 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcC-
Confidence            99999999999999999999999999999999999976        77776544322      3455899999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhh-CCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPC-GGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ..++.++|||||||++|||+| |.+||...+..+....+......     ..       .+...++.+.++|.+||+.|
T Consensus       222 -~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~-----~~-------~~~~~~~~l~~Li~~cl~~d  288 (311)
T d1t46a_         222 -CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR-----ML-------SPEHAPAEMYDIMKTCWDAD  288 (311)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCC-----CC-------CCTTSCHHHHHHHHHHTCSS
T ss_pred             -CCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC-----CC-------CcccccHHHHHHHHHHcCCC
Confidence             668999999999999999998 56666666665655555443311     11       11457899999999999999


Q ss_pred             CCCCccHHHHhh
Q 037274          227 PAKRPAAEAQVL  238 (245)
Q Consensus       227 p~~Rpt~~~~l~  238 (245)
                      |.+|||++++++
T Consensus       289 P~~RPs~~~il~  300 (311)
T d1t46a_         289 PLKRPTFKQIVQ  300 (311)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhHCcCHHHHHH
Confidence            999999999875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-43  Score=275.90  Aligned_cols=219  Identities=19%  Similarity=0.251  Sum_probs=169.9

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHH
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCL   86 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (245)
                      .....+.+.+|+.++++++||||+++++++.+.+..+++++++.+++|..++..                 ...+++..+
T Consensus        41 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~-----------------~~~~~~~~~  103 (292)
T d1unla_          41 DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-----------------NGDLDPEIV  103 (292)
T ss_dssp             STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHT-----------------TTCCCHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeecccccccccccc-----------------ccccchhHH
Confidence            345678899999999999999999999999999999999999999888555432                 456889999


Q ss_pred             HHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC----CCccccccccCceecCCCCCCCch
Q 037274           87 AIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS----SSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        87 ~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      ..++.|++.||+|||++||+||||||+|||++.        ||.+.......    ...+++.|+|||.+.. ...++.+
T Consensus       104 ~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~  182 (292)
T d1unla_         104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG-AKLYSTS  182 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTT-CSCCCTH
T ss_pred             HHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhhhhHhcc-CCCCCch
Confidence            999999999999999999999999999999975        88776554332    2334788999998875 3457899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCCCccCC---------------CCCCCCCCCCcccccHHHHHH
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPKSTSLQ---------------VAPNEDTTHGTRTLSKNFWNM  218 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~l  218 (245)
                      +|||||||++|+|++|+.||....+ .+....+...........               ..............++.+.+|
T Consensus       183 ~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl  262 (292)
T d1unla_         183 IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDL  262 (292)
T ss_dssp             HHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHH
T ss_pred             hhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHH
Confidence            9999999999999999998755443 444443332211110000               000111122235678899999


Q ss_pred             HHHhcCCCCCCCccHHHHhhccccc
Q 037274          219 VKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       219 i~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      +++||+.||.+|||++|+++||||.
T Consensus       263 l~~mL~~dP~~R~sa~e~L~Hp~f~  287 (292)
T d1unla_         263 LQNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             HHHHSCSSGGGSCCHHHHTTSGGGS
T ss_pred             HHHHccCChhHCcCHHHHhcChhhc
Confidence            9999999999999999999999995

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-44  Score=279.52  Aligned_cols=204  Identities=17%  Similarity=0.265  Sum_probs=162.8

Q ss_pred             cccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe-CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            5 NHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS-QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      ..+.+..+++.+|++++++++||||++++|++.. ++..++||||+++|+|.+++..                .....++
T Consensus        66 ~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~----------------~~~~~~~  129 (311)
T d1r0pa_          66 ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN----------------ETHNPTV  129 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHC----------------TTCCCBH
T ss_pred             ccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhcc----------------ccccchH
Confidence            4567788999999999999999999999999865 5689999999999999776653                2345778


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC--------CCccccccccCceecCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAAAPEVVNFG  147 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~aPE~~~~~  147 (245)
                      ..+..++.|++.||.|+|+.+++||||||+|||++.        ||+++......        ...+|+.|+|||.+.. 
T Consensus       130 ~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-  208 (311)
T d1r0pa_         130 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT-  208 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHH-
T ss_pred             HHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhc-
Confidence            888999999999999999999999999999999976        77776543322        2345889999999987 


Q ss_pred             CCCCCchhhHHHHHHHHHHHhhCCCCCCCCCc-hHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQD-LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       148 ~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                       ..++.++||||||+++|||++|..||..... .+....+....      ...       .+..+++++.+++.+||+.|
T Consensus       209 -~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~------~~~-------~p~~~~~~l~~li~~cl~~d  274 (311)
T d1r0pa_         209 -QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR------RLL-------QPEYCPDPLYEVMLKCWHPK  274 (311)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTC------CCC-------CCTTCCHHHHHHHHHHTCSS
T ss_pred             -CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC------CCC-------CcccCcHHHHHHHHHHcCCC
Confidence             5689999999999999999998777765332 23333332221      111       12557889999999999999


Q ss_pred             CCCCccHHHHhhc
Q 037274          227 PAKRPAAEAQVLQ  239 (245)
Q Consensus       227 p~~Rpt~~~~l~~  239 (245)
                      |++|||+.+++++
T Consensus       275 P~~RPs~~ei~~~  287 (311)
T d1r0pa_         275 AEMRPSFSELVSR  287 (311)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999886

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=7.8e-44  Score=281.20  Aligned_cols=212  Identities=15%  Similarity=0.165  Sum_probs=162.2

Q ss_pred             HHHHHHHHHHHhhCC-CCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274           11 YAKLAREIYRYKHLS-HPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus        11 ~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      .+++.+|+++|++++ ||||+++++++...  +..++||||+.+++|..+.                    ..+++..+.
T Consensus        73 ~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~--------------------~~l~e~~i~  132 (328)
T d3bqca1          73 KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY--------------------QTLTDYDIR  132 (328)
T ss_dssp             HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT--------------------TSCCHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh--------------------cCCCHHHHH
Confidence            467899999999995 99999999999754  5699999999999984322                    358899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc---------ccCccccccC---CCCccccccccCceecCCCCCCCchh
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI---------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDDYYSCKS  155 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~---------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~  155 (245)
                      .++.||+.||.|||++||+||||||+|||++.         ||.+......   ....+|+.|+|||.+.+ ...++.++
T Consensus       133 ~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~  211 (328)
T d3bqca1         133 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD-YQMYDYSL  211 (328)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTT-CCCCCTHH
T ss_pred             HHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccC-CCCCCccc
Confidence            99999999999999999999999999999974         8877654432   24456999999999875 34579999


Q ss_pred             hHHHHHHHHHHHhhCCCCCCCCCchH-HHHHHHhc------------C--CCCccCCC-----CC----CCCCCCCcccc
Q 037274          156 DIWLIGITALQFPCGGLPVSRRQDLD-IMTKMLMK------------Q--PKSTSLQV-----AP----NEDTTHGTRTL  211 (245)
Q Consensus       156 DvwslG~~l~~~~~g~~p~~~~~~~~-~~~~~~~~------------~--~~~~~~~~-----~~----~~~~~~~~~~~  211 (245)
                      ||||+||++|++++|+.||....... ....+...            .  ........     ..    ..........+
T Consensus       212 DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (328)
T d3bqca1         212 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV  291 (328)
T ss_dssp             HHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGC
T ss_pred             chhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccC
Confidence            99999999999999999998755432 11111110            0  00000000     00    00111122557


Q ss_pred             cHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          212 SKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       212 ~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ++++.+||++||..||.+|||++|+++||||+
T Consensus       292 s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~  323 (328)
T d3bqca1         292 SPEALDFLDKLLRYDHQSRLTAREAMEHPYFY  323 (328)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            88999999999999999999999999999996

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-44  Score=278.16  Aligned_cols=213  Identities=12%  Similarity=0.201  Sum_probs=172.6

Q ss_pred             ccccHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcH
Q 037274            4 INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV   83 (245)
Q Consensus         4 ~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (245)
                      .....+....+.+|++++++++||||+++++.+..++..++||||+++|+|.+++....       ...........+++
T Consensus        60 ~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~-------~~~~~~~~~~~~~~  132 (308)
T d1p4oa_          60 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR-------PAMANNPVLAPPSL  132 (308)
T ss_dssp             TTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHH-------HHHHHCTTCCCCCH
T ss_pred             cccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcc-------cccccccccCCCCH
Confidence            34466677789999999999999999999999999999999999999999998886310       11111122345788


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCCC
Q 037274           84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        84 ~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~  149 (245)
                      ..+..++.|++.||.|||+++++||||||+|||++.        ||+++......      ...+|+.|+|||.+.+  .
T Consensus       133 ~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~--~  210 (308)
T d1p4oa_         133 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD--G  210 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH--C
T ss_pred             HHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHcc--C
Confidence            999999999999999999999999999999999987        88876443322      3346899999999987  6


Q ss_pred             CCCchhhHHHHHHHHHHHhhCC-CCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCC
Q 037274          150 YYSCKSDIWLIGITALQFPCGG-LPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPA  228 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  228 (245)
                      .++.++||||||+++|||+||. .||.+.+..+....+....      ..+.       +..+++.+.+++.+||+.||.
T Consensus       211 ~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~------~~~~-------p~~~~~~l~~li~~cl~~~P~  277 (308)
T d1p4oa_         211 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG------LLDK-------PDNCPDMLFELMRMCWQYNPK  277 (308)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC------CCCC-------CTTCCHHHHHHHHHHTCSSGG
T ss_pred             CCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCC------CCCC-------cccchHHHHHHHHHHcCCChh
Confidence            6899999999999999999985 7888777766666554332      1111       155789999999999999999


Q ss_pred             CCccHHHHhh
Q 037274          229 KRPAAEAQVL  238 (245)
Q Consensus       229 ~Rpt~~~~l~  238 (245)
                      +|||++++++
T Consensus       278 ~RPs~~~il~  287 (308)
T d1p4oa_         278 MRPSFLEIIS  287 (308)
T ss_dssp             GSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999987

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-44  Score=278.97  Aligned_cols=220  Identities=16%  Similarity=0.237  Sum_probs=160.3

Q ss_pred             cccHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEEeC-ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCc
Q 037274            5 NHQAEEYAKLAREIYRYKHL-SHPNIIPIYKTMISQ-RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT   82 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (245)
                      .......+.+.+|+..+.++ +|+||+.+++++..+ +..++||||+++|+|.+++.......... ...........++
T Consensus        54 ~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~-~~~~~~~~~~~l~  132 (299)
T d1ywna1          54 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY-KVAPEDLYKDFLT  132 (299)
T ss_dssp             --CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC------------CBC
T ss_pred             ccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhcccccccc-ccchhhhhcccCC
Confidence            34456677888899888877 588999999987654 46899999999999999886432110000 0000011235689


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccCC------CCccccccccCceecCCC
Q 037274           83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWISS------SSSITTWAAAPEVVNFGD  148 (245)
Q Consensus        83 ~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~~------~~~~~~~y~aPE~~~~~~  148 (245)
                      +..+..++.||+.||+|||++||+||||||+|||++.        ||+++......      ...||+.|+|||.+.+  
T Consensus       133 ~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~--  210 (299)
T d1ywna1         133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD--  210 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhc--
Confidence            9999999999999999999999999999999999986        88876443222      3456999999999987  


Q ss_pred             CCCCchhhHHHHHHHHHHHhhC-CCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCC
Q 037274          149 DYYSCKSDIWLIGITALQFPCG-GLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP  227 (245)
Q Consensus       149 ~~~~~~~DvwslG~~l~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  227 (245)
                      ..++.++|||||||++|||++| .+||.+................     ..       .+..+++++.+++.+||+.||
T Consensus       211 ~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~l~~li~~cl~~dP  278 (299)
T d1ywna1         211 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-----MR-------APDYTTPEMYQTMLDCWHGEP  278 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCC-----CC-------CCTTCCHHHHHHHHHHTCSSG
T ss_pred             CCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC-----CC-------CCccCCHHHHHHHHHHcCCCh
Confidence            6689999999999999999986 5678776555544444333211     11       115578999999999999999


Q ss_pred             CCCccHHHHhhc
Q 037274          228 AKRPAAEAQVLQ  239 (245)
Q Consensus       228 ~~Rpt~~~~l~~  239 (245)
                      ++|||++++++|
T Consensus       279 ~~Rpt~~eil~~  290 (299)
T d1ywna1         279 SQRPTFSELVEH  290 (299)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999986

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-45  Score=286.38  Aligned_cols=208  Identities=18%  Similarity=0.176  Sum_probs=167.5

Q ss_pred             HHHHHHHHHHHHHhhCCC-CCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSH-PNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h-~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      +..+.+.+|++++++++| |||+++++++.+.+..++++||+.+|+|.+++..                 ...+++..+.
T Consensus        70 ~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~-----------------~~~~~e~~~~  132 (322)
T d1vzoa_          70 KTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ-----------------RERFTEHEVQ  132 (322)
T ss_dssp             SSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHH-----------------HSCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHh-----------------cccccHHHHH
Confidence            345678899999999976 8999999999999999999999999999776652                 3456788899


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-----CCCCccccccccCceecCCCCCCCch
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-----SSSSSITTWAAAPEVVNFGDDYYSCK  154 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~  154 (245)
                      .++.|++.||.|+|++|++||||||+||+++.        ||++.....     .....+++.|+|||.+.++...++.+
T Consensus       133 ~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~k  212 (322)
T d1vzoa_         133 IYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKA  212 (322)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTH
T ss_pred             HHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCch
Confidence            99999999999999999999999999999986        887654322     22345699999999998655567899


Q ss_pred             hhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCCCCCCc---
Q 037274          155 SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP---  231 (245)
Q Consensus       155 ~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---  231 (245)
                      +|||||||++|+|++|..||.+.+..+....+.......   ..       ..+..+++++.+++++||++||.+||   
T Consensus       213 sDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~---~~-------~~~~~~s~~~~~li~~~l~~dP~~R~s~~  282 (322)
T d1vzoa_         213 VDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS---EP-------PYPQEMSALAKDLIQRLLMKDPKKRLGCG  282 (322)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC---CC-------CCCTTSCHHHHHHHHHHTCSSGGGSTTSS
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccC---CC-------CCcccCCHHHHHHHHHHcccCHHHcCCCC
Confidence            999999999999999999998766555444443322110   00       11156899999999999999999999   


Q ss_pred             --cHHHHhhccccc
Q 037274          232 --AAEAQVLQEMWH  243 (245)
Q Consensus       232 --t~~~~l~~~~f~  243 (245)
                        |++|+++||||+
T Consensus       283 ~~t~~eil~Hpff~  296 (322)
T d1vzoa_         283 PRDADEIKEHLFFQ  296 (322)
T ss_dssp             TTTHHHHHTSGGGT
T ss_pred             cccHHHHHcCHhhc
Confidence              589999999995

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-44  Score=286.09  Aligned_cols=215  Identities=16%  Similarity=0.213  Sum_probs=160.7

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEe------CceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMIS------QRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYG   80 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (245)
                      +.+..+.+.+|+.++++++||||+++++++..      .+..|+||||+.++++.. +                   ...
T Consensus        56 ~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~-~-------------------~~~  115 (355)
T d2b1pa1          56 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV-I-------------------QME  115 (355)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHH-H-------------------TSC
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHHHh-h-------------------hcC
Confidence            45667789999999999999999999999964      357899999998765522 1                   235


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCccccccC---CCCccccccccCceecCCCC
Q 037274           81 ITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWIS---SSSSITTWAAAPEVVNFGDD  149 (245)
Q Consensus        81 ~~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~  149 (245)
                      +++..++.++.||+.||.|||++||+||||||+|||++.        ||.+......   ....+|+.|+|||.+.+  .
T Consensus       116 ~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~--~  193 (355)
T d2b1pa1         116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG--M  193 (355)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------------CCTTCCHHHHTT--C
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccccccccccccccccccChhhhcC--C
Confidence            889999999999999999999999999999999999986        5544433322   23456999999999987  6


Q ss_pred             CCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccC--------------CCC-C-------------C
Q 037274          150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSL--------------QVA-P-------------N  201 (245)
Q Consensus       150 ~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------~~~-~-------------~  201 (245)
                      .++.++||||+||++++|++|+.||.+.+.......+..........              ... .             .
T Consensus       194 ~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (355)
T d2b1pa1         194 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLF  273 (355)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGS
T ss_pred             CCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccc
Confidence            78999999999999999999999998877666555443322110000              000 0             0


Q ss_pred             CCCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          202 EDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       202 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      ..........++++.+||++||..||++|||++|+|+||||.
T Consensus       274 ~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~  315 (355)
T d2b1pa1         274 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN  315 (355)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             cccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence            000011123567899999999999999999999999999995

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-44  Score=283.65  Aligned_cols=218  Identities=18%  Similarity=0.234  Sum_probs=166.6

Q ss_pred             cHHHHHHHHHHHHHHhhCCCCCeeeEEEEEEeC-----ceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCC
Q 037274            7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQ-----RQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGI   81 (245)
Q Consensus         7 ~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (245)
                      +....+.+.+|+++|++|+||||+++++++...     ...+++++++.+|+|.+++.                  ...+
T Consensus        57 ~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~------------------~~~l  118 (348)
T d2gfsa1          57 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK------------------CQKL  118 (348)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHT------------------TCCC
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcc------------------cccc
Confidence            455677899999999999999999999998643     33566777888999977664                  2468


Q ss_pred             cHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceeccc--------ccCcccccc-CCCCccccccccCceecCCCCCCC
Q 037274           82 TVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------FNDDTRNWI-SSSSSITTWAAAPEVVNFGDDYYS  152 (245)
Q Consensus        82 ~~~~~~~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~--------f~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~  152 (245)
                      ++..++.++.||+.||.|||++||+||||||+|||++.        ||.+..... .....+++.|+|||...+ ...++
T Consensus       119 ~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~-~~~~~  197 (348)
T d2gfsa1         119 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN-WMHYN  197 (348)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTT-CSCCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcccccccccccccCchhhcC-CccCC
Confidence            99999999999999999999999999999999999986        555543332 224556999999998775 34578


Q ss_pred             chhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCC---------------CC--CCCCCCCCcccccHHH
Q 037274          153 CKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQ---------------VA--PNEDTTHGTRTLSKNF  215 (245)
Q Consensus       153 ~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------~~--~~~~~~~~~~~~~~~~  215 (245)
                      .++|||||||++|+|++|..||.+.+.......+...........               ..  ............++++
T Consensus       198 ~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  277 (348)
T d2gfsa1         198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLA  277 (348)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHH
T ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHH
Confidence            999999999999999999999998777666655544332111000               00  0000000114578899


Q ss_pred             HHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          216 WNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       216 ~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                      .+||.+||..||.+|||++|+++||||.
T Consensus       278 ~dli~~mL~~dP~~R~ta~elL~Hp~f~  305 (348)
T d2gfsa1         278 VDLLEKMLVLDSDKRITAAQALAHAYFA  305 (348)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HHHHHHHCcCChhhCcCHHHHhcCHhhC
Confidence            9999999999999999999999999995

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-42  Score=265.91  Aligned_cols=207  Identities=20%  Similarity=0.191  Sum_probs=150.0

Q ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEEeCc----eeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHH
Q 037274            9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQR----QLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD   84 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (245)
                      ........|+..+++++||||+++++++.+++    .+++||||+++|+|.++++.                  ..+++.
T Consensus        39 ~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------------------~~l~~~  100 (303)
T d1vjya_          39 ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------------------YTVTVE  100 (303)
T ss_dssp             HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH------------------CCBCHH
T ss_pred             hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhc------------------CCCCHH
Confidence            33333455666777889999999999987654    58999999999999777752                  358899


Q ss_pred             HHHHHHHHHHHHHHHHHh--------CCcccccCCCCceeccc--------ccCccccccCC--------CCcccccccc
Q 037274           85 CLAIAHKETLKGLSYLQG--------EGLFHKNISAGHILHNI--------FNDDTRNWISS--------SSSITTWAAA  140 (245)
Q Consensus        85 ~~~~~~~qi~~~l~~lh~--------~~ivH~dlkp~nil~~~--------f~~~~~~~~~~--------~~~~~~~y~a  140 (245)
                      .+..++.|++.||+|+|+        +||+||||||+|||++.        ||++.......        ...||+.|+|
T Consensus       101 ~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~a  180 (303)
T d1vjya_         101 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA  180 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCC
Confidence            999999999999999996        59999999999999976        88776543322        3457999999


Q ss_pred             CceecCCCC----CCCchhhHHHHHHHHHHHhhCCCCCCCCCch--------------HHHHHHHhcCCCCccCCCCCCC
Q 037274          141 PEVVNFGDD----YYSCKSDIWLIGITALQFPCGGLPVSRRQDL--------------DIMTKMLMKQPKSTSLQVAPNE  202 (245)
Q Consensus       141 PE~~~~~~~----~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~  202 (245)
                      ||++.+...    .++.++|||||||++|||+||..||......              ..........  .    ..+..
T Consensus       181 PE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~p~~  254 (303)
T d1vjya_         181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ--K----LRPNI  254 (303)
T ss_dssp             HHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS--C----CCCCC
T ss_pred             hhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhcc--c----cCCCC
Confidence            999875211    2567899999999999999998877432211              1111111111  0    00000


Q ss_pred             CCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhc
Q 037274          203 DTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ  239 (245)
Q Consensus       203 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~  239 (245)
                      .........+..+.+++.+||+.||.+|||+.+++++
T Consensus       255 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             CcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            0111112344568999999999999999999998763

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.9e-41  Score=260.36  Aligned_cols=207  Identities=13%  Similarity=0.099  Sum_probs=151.5

Q ss_pred             HHHHHHHHHHHHhhCCCCCee-eEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNII-PIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAI   88 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv-~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (245)
                      ..+.+..|++++++++|+|++ .+.++...++..++|||++.+ ++.+.+..                ....+++..+..
T Consensus        45 ~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~-~l~~~~~~----------------~~~~~~~~~~~~  107 (299)
T d1ckia_          45 KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGP-SLEDLFNF----------------CSRKFSLKTVLL  107 (299)
T ss_dssp             TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCCC-BHHHHHHH----------------TTTCCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcCC-chhhhhhh----------------ccCCCcHHHHHH
Confidence            345688999999999877655 555556777889999999964 66443321                245689999999


Q ss_pred             HHHHHHHHHHHHHhCCcccccCCCCceeccc-----------ccCccccccCC-----------CCccccccccCceecC
Q 037274           89 AHKETLKGLSYLQGEGLFHKNISAGHILHNI-----------FNDDTRNWISS-----------SSSITTWAAAPEVVNF  146 (245)
Q Consensus        89 ~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-----------f~~~~~~~~~~-----------~~~~~~~y~aPE~~~~  146 (245)
                      ++.|++.||+|||++||+||||||+|||++.           ||+++......           ...||+.|+|||.+.+
T Consensus       108 ~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  187 (299)
T d1ckia_         108 LADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG  187 (299)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhC
Confidence            9999999999999999999999999998653           88876544322           3457999999999987


Q ss_pred             CCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHHHHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHHHhcCCC
Q 037274          147 GDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD  226 (245)
Q Consensus       147 ~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  226 (245)
                        ..++.++|||||||++|||++|..||....................  ..+    .......+|+++.+++..||+.+
T Consensus       188 --~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~p~~~~~li~~cl~~~  259 (299)
T d1ckia_         188 --IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM--STP----IEVLCKGYPSEFATYLNFCRSLR  259 (299)
T ss_dssp             --BCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHH--HSC----HHHHTTTSCHHHHHHHHHHHHSC
T ss_pred             --CCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccC--CCC----hhHhccCCCHHHHHHHHHHccCC
Confidence              6689999999999999999999999987555443322211110000  000    00111467899999999999999


Q ss_pred             CCCCccHHHH---hhccc
Q 037274          227 PAKRPAAEAQ---VLQEM  241 (245)
Q Consensus       227 p~~Rpt~~~~---l~~~~  241 (245)
                      |++||+++++   ++++|
T Consensus       260 p~~RP~~~~i~~~l~~~~  277 (299)
T d1ckia_         260 FDDKPDYSYLRQLFRNLF  277 (299)
T ss_dssp             TTCCCCHHHHHHHHHHHH
T ss_pred             hhHCcCHHHHHHHHHHHH
Confidence            9999998754   55544

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.1e-39  Score=253.18  Aligned_cols=201  Identities=15%  Similarity=0.103  Sum_probs=156.5

Q ss_pred             HHHHHHHHHHHHHhhCCC-CCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHH
Q 037274            9 EEYAKLAREIYRYKHLSH-PNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLA   87 (245)
Q Consensus         9 ~~~~~~~~E~~~l~~l~h-~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (245)
                      ...+.+.+|++.++.|+| +||+.+++++..++..++|||++ +++|.+++..                ....++...+.
T Consensus        42 ~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~----------------~~~~~~~~~~~  104 (293)
T d1csna_          42 SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDL----------------CGRKFSVKTVA  104 (293)
T ss_dssp             TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHH----------------TTTCCCHHHHH
T ss_pred             cCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHh----------------hccchhhHHHH
Confidence            344568899999999975 89999999999999999999999 5799665542                23468899999


Q ss_pred             HHHHHHHHHHHHHHhCCcccccCCCCceeccc-------------ccCccccccC-----------CCCccccccccCce
Q 037274           88 IAHKETLKGLSYLQGEGLFHKNISAGHILHNI-------------FNDDTRNWIS-----------SSSSITTWAAAPEV  143 (245)
Q Consensus        88 ~~~~qi~~~l~~lh~~~ivH~dlkp~nil~~~-------------f~~~~~~~~~-----------~~~~~~~~y~aPE~  143 (245)
                      .++.|++.||.|||++|++||||||+||+++.             ||+++.....           ....||+.|+|||.
T Consensus       105 ~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~  184 (293)
T d1csna_         105 MAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINT  184 (293)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHH
Confidence            99999999999999999999999999999852             8887654321           23457999999999


Q ss_pred             ecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchHHH---HHHHhcCCCCccCCCCCCCCCCCCcccccHHHHHHHH
Q 037274          144 VNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIM---TKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVK  220 (245)
Q Consensus       144 ~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  220 (245)
                      +.+  ..++.++||||||+++|+|++|+.||.+.......   ..+.......      +   .......+|+++.+++.
T Consensus       185 ~~~--~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~------~---~~~l~~~~p~~l~~ii~  253 (293)
T d1csna_         185 HLG--REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST------P---LRELCAGFPEEFYKYMH  253 (293)
T ss_dssp             HTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS------C---HHHHTTTSCHHHHHHHH
T ss_pred             hcC--CCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC------C---hHHhcCCCCHHHHHHHH
Confidence            987  66999999999999999999999999865443222   2221111000      0   00011457889999999


Q ss_pred             HhcCCCCCCCccHHHHh
Q 037274          221 ICLAPDPAKRPAAEAQV  237 (245)
Q Consensus       221 ~~l~~~p~~Rpt~~~~l  237 (245)
                      .|+..+|++||+.+.+.
T Consensus       254 ~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         254 YARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHCCTTCCCCHHHHH
T ss_pred             HHhcCCcccCcCHHHHH
Confidence            99999999999877654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.3e-37  Score=244.33  Aligned_cols=223  Identities=15%  Similarity=0.201  Sum_probs=154.3

Q ss_pred             cccHHHHHHHHHHHHHHhhCC-----------CCCeeeEEEEEEeC--ceeEEEeeecccCCHHHHHhcCCCCChhhHHH
Q 037274            5 NHQAEEYAKLAREIYRYKHLS-----------HPNIIPIYKTMISQ--RQLFYAEIACMIGSLDSIMTYRPLNSPAATQL   71 (245)
Q Consensus         5 ~~~~~~~~~~~~E~~~l~~l~-----------h~~Iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~   71 (245)
                      .+.....+.+.+|+++++.++           |+||+++++++...  ...+++++++..+....              .
T Consensus        47 ~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~  112 (362)
T d1q8ya_          47 RGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLL--------------A  112 (362)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHH--------------H
T ss_pred             eccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccc--------------c
Confidence            444455678899999998875           57899999887643  45666666665443311              1


Q ss_pred             HhhhccCCCCcHHHHHHHHHHHHHHHHHHHh-CCcccccCCCCceeccc--------------ccCccccccC-CCCccc
Q 037274           72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQG-EGLFHKNISAGHILHNI--------------FNDDTRNWIS-SSSSIT  135 (245)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~-~~ivH~dlkp~nil~~~--------------f~~~~~~~~~-~~~~~~  135 (245)
                      .........+++..++.++.||+.||.|||+ .||+||||||+|||++.              ||.+...... ....+|
T Consensus       113 ~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt  192 (362)
T d1q8ya_         113 LIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQT  192 (362)
T ss_dssp             HHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSC
T ss_pred             ccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccccccccccc
Confidence            1222335678899999999999999999998 89999999999999864              6665433332 245579


Q ss_pred             cccccCceecCCCCCCCchhhHHHHHHHHHHHhhCCCCCCCCCchH------HHHHHHhcCCC-----------------
Q 037274          136 TWAAAPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLD------IMTKMLMKQPK-----------------  192 (245)
Q Consensus       136 ~~y~aPE~~~~~~~~~~~~~DvwslG~~l~~~~~g~~p~~~~~~~~------~~~~~~~~~~~-----------------  192 (245)
                      +.|+|||.+..  ..++.++|+||+||++++|++|+.||.......      ...........                 
T Consensus       193 ~~y~aPE~~~~--~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  270 (362)
T d1q8ya_         193 REYRSPEVLLG--APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFN  270 (362)
T ss_dssp             GGGCCHHHHHT--CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBC
T ss_pred             ccccChhhccc--cCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccc
Confidence            99999999987  568999999999999999999999997543211      11111110000                 


Q ss_pred             --CccCCCCCCC---------CCCCCcccccHHHHHHHHHhcCCCCCCCccHHHHhhccccc
Q 037274          193 --STSLQVAPNE---------DTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH  243 (245)
Q Consensus       193 --~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~~l~~~~f~  243 (245)
                        ..........         .........++++.+|+.+||..||.+|||++|+|+||||+
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~  332 (362)
T d1q8ya_         271 SRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK  332 (362)
T ss_dssp             C--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGT
T ss_pred             cchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccC
Confidence              0000000000         01112244678899999999999999999999999999996

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.60  E-value=1.7e-16  Score=114.30  Aligned_cols=82  Identities=12%  Similarity=0.047  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHHhhCCCCCeeeEEEEEEeCceeEEEeeecccCCHHHHHhcCCCCChhhHHHHhhhccCCCCcHHHHHHH
Q 037274           10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIA   89 (245)
Q Consensus        10 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (245)
                      .......|...+.++.|.+++..+++.    ..+++||++++..+.                        .++......+
T Consensus        57 ~~~~~~~e~~~l~~l~~~~v~~~~~~~----~~~lvme~~~~~~~~------------------------~l~~~~~~~i  108 (191)
T d1zara2          57 AIRSARNEFRALQKLQGLAVPKVYAWE----GNAVLMELIDAKELY------------------------RVRVENPDEV  108 (191)
T ss_dssp             HHHHHHHHHHHHHHTTTSSSCCEEEEE----TTEEEEECCCCEEGG------------------------GCCCSCHHHH
T ss_pred             HHHHHHHHHHHHHHccCCCcceEEEec----CCEEEEEeecccccc------------------------chhhHHHHHH
Confidence            345567799999999999999888653    237999999876551                        1344455678


Q ss_pred             HHHHHHHHHHHHhCCcccccCCCCceeccc
Q 037274           90 HKETLKGLSYLQGEGLFHKNISAGHILHNI  119 (245)
Q Consensus        90 ~~qi~~~l~~lh~~~ivH~dlkp~nil~~~  119 (245)
                      +.|++.++++||++|++||||||+|||++.
T Consensus       109 ~~ql~~~l~~lH~~giiHrDiKP~NILv~~  138 (191)
T d1zara2         109 LDMILEEVAKFYHRGIVHGDLSQYNVLVSE  138 (191)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSTTSEEEET
T ss_pred             HHHHHHHHHHHhhCCEEEccCChhheeeeC
Confidence            899999999999999999999999999987

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.96  E-value=0.00075  Score=49.16  Aligned_cols=46  Identities=7%  Similarity=-0.227  Sum_probs=34.7

Q ss_pred             HHHHHHHHHHhhCC-CCCeeeEEEEEEeCceeEEEeeecccCCHHHH
Q 037274           12 AKLAREIYRYKHLS-HPNIIPIYKTMISQRQLFYAEIACMIGSLDSI   57 (245)
Q Consensus        12 ~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~   57 (245)
                      ..+.+|...+..|. +--+.+++++...++..++||++.+|.++.+.
T Consensus        54 ~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~  100 (263)
T d1j7la_          54 YDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             TCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             hhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccc
Confidence            35778888888774 32345677777788889999999998877554

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.37  E-value=0.0034  Score=45.25  Aligned_cols=43  Identities=12%  Similarity=0.045  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHhhCCCCC--eeeEEEEEEeCceeEEEeeecccCCH
Q 037274           12 AKLAREIYRYKHLSHPN--IIPIYKTMISQRQLFYAEIACMIGSL   54 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~--Iv~~~~~~~~~~~~~lv~e~~~~~~L   54 (245)
                      ..+..|+..++.|....  +.++++...+++..+++|++++|.++
T Consensus        49 ~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          49 NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            35788888888875333  45667777788889999999987665

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=89.12  E-value=0.11  Score=39.84  Aligned_cols=39  Identities=18%  Similarity=0.084  Sum_probs=26.9

Q ss_pred             HHHHHHHHHHhhCCCCCe-eeEEEEEEeCceeEEEeeecccCCH
Q 037274           12 AKLAREIYRYKHLSHPNI-IPIYKTMISQRQLFYAEIACMIGSL   54 (245)
Q Consensus        12 ~~~~~E~~~l~~l~h~~I-v~~~~~~~~~~~~~lv~e~~~~~~L   54 (245)
                      -...+|..+++.+.-.++ .++++++.  +  .+|++|++|.++
T Consensus        89 idr~~E~~i~~~ls~~gl~Pkll~~~~--~--g~I~efi~g~~l  128 (395)
T d1nw1a_          89 SHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEYIPSRPL  128 (395)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECCCCEEEC
T ss_pred             hHHHHHHHHHHHHHhCCCCCeEEEEcC--C--ceEEEEeccccC
Confidence            356689999998853344 46777653  2  588999987554

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=88.79  E-value=0.23  Score=37.90  Aligned_cols=40  Identities=5%  Similarity=-0.084  Sum_probs=25.8

Q ss_pred             HHHHHHHHHhhCC-C--CCeeeEEEEEEeCceeEEEeeecccCCH
Q 037274           13 KLAREIYRYKHLS-H--PNIIPIYKTMISQRQLFYAEIACMIGSL   54 (245)
Q Consensus        13 ~~~~E~~~l~~l~-h--~~Iv~~~~~~~~~~~~~lv~e~~~~~~L   54 (245)
                      ....|...|+.+. +  ..+.+++.+  +++..+++||++.+..+
T Consensus        76 R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lvmE~L~~~~~  118 (392)
T d2pula1          76 RARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSHLKI  118 (392)
T ss_dssp             HHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCTTSEE
T ss_pred             HHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEEEeccCCccc
Confidence            4556888887663 2  345555554  45567899999976543