Citrus Sinensis ID: 037348

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------58
SSTWLPPSPSFTSSSSSTEQPHRTTRIMTALSSLHSLFFSPLLKIPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEECcccccccccCEEEECcccEEEEEcccccEEEEccccccccccccccEEcccEEEEccccEEEcccccEEEcccccccccccccccccEEEEEEEccEEEEEcccccccccccccccccccccccEEEEEEEEECccHHHHHHHccccccccccccccccccccccccccEEEEEECcccCEEEECcccccccccEEEEEEccCEEEEcccccccccccccEEEEEEEEEEcccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccCEcccccc
***************************MTALSSLHSLFFSPLLKI**************************************************************************ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFI*THR**
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SSTWLPPSPSFTSSSSSTEQPHRTTRIMTALSSLHSLFFSPLLKIPSPKLKPSPFFTPPTTGNVISPIKAHKLRKRTEPKLTKCHAVTDMSSSAVPTPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein TIC 55, chloroplastic Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.confidentQ9SK50
Protein TIC 55, chloroplastic Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.probableO49931

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1Z01, chain A
Confidence level:very confident
Coverage over the Query: 103-448
View the alignment between query and template
View the model in PyMOL
Template: 4AAY, chain B
Confidence level:confident
Coverage over the Query: 123-234
View the alignment between query and template
View the model in PyMOL