Citrus Sinensis ID: 037348
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 579 | 2.2.26 [Sep-21-2011] | |||||||
| O49931 | 553 | Protein TIC 55, chloropla | N/A | no | 0.829 | 0.867 | 0.825 | 0.0 | |
| Q9SK50 | 539 | Protein TIC 55, chloropla | yes | no | 0.915 | 0.983 | 0.706 | 0.0 | |
| Q9FYC2 | 537 | Pheophorbide a oxygenase, | no | no | 0.730 | 0.787 | 0.289 | 3e-43 | |
| Q8W496 | 559 | Protochlorophyllide-depen | no | no | 0.708 | 0.733 | 0.259 | 3e-37 | |
| Q9ZWM5 | 645 | Chlorophyllide a oxygenas | N/A | no | 0.504 | 0.452 | 0.276 | 3e-28 | |
| Q8S7E1 | 541 | Chlorophyllide a oxygenas | no | no | 0.511 | 0.547 | 0.277 | 3e-22 | |
| Q9XJ38 | 463 | Chlorophyllide a oxygenas | N/A | no | 0.573 | 0.717 | 0.257 | 3e-21 | |
| Q9AHG3 | 346 | Putative toluene-4-sulfon | no | no | 0.272 | 0.456 | 0.329 | 3e-18 | |
| Q9MBA1 | 536 | Chlorophyllide a oxygenas | no | no | 0.514 | 0.555 | 0.252 | 7e-18 | |
| O05616 | 354 | Vanillate O-demethylase o | N/A | no | 0.305 | 0.5 | 0.300 | 1e-17 |
| >sp|O49931|TIC55_PEA Protein TIC 55, chloroplastic OS=Pisum sativum GN=TIC55 PE=1 SV=1 | Back alignment and function desciption |
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Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/481 (82%), Positives = 434/481 (90%), Gaps = 1/481 (0%)
Query: 99 DDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG 158
+D KVLVGP+SE+E +GER VADYDWTEEWYPLYLTK+VP DAPLGL V+D+ IVL++DG
Sbjct: 74 EDQKVLVGPSSEQERKGEREVADYDWTEEWYPLYLTKNVPHDAPLGLKVYDKNIVLFRDG 133
Query: 159 KGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC 218
+ +C++DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP+SAC
Sbjct: 134 NDQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPKSAC 193
Query: 219 VRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLM 278
V+TYEV++SQGV+WVWMS+KTPPN K+PWFENFARPGFQD+ST HELPYDHSILLENLM
Sbjct: 194 VKTYEVRDSQGVLWVWMSRKTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILLENLM 253
Query: 279 DPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVL 338
DPAH+PISHDRTD+SAKREDAQ LGFEVTERTDRGFAG WGREKDGS PNFLRFEAPCVL
Sbjct: 254 DPAHVPISHDRTDWSAKREDAQALGFEVTERTDRGFAGWWGREKDGSKPNFLRFEAPCVL 313
Query: 339 QNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASK 398
QNNRE VD K GE ++ +GLFLCRPTGQGKSMLIVRFG T SP IKLFP+WYFHQ+ASK
Sbjct: 314 QNNREIVD-KNGEINHFSGLFLCRPTGQGKSMLIVRFGATKRSPLIKLFPEWYFHQNASK 372
Query: 399 VFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTI 458
VFEQDMGFLSSQNE+LLKEKVPTKELY NL+S DTWVAEYRKWMDK GHGMPY+FGHSTI
Sbjct: 373 VFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTI 432
Query: 459 SLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFN 518
SLP+ PAVVEHAPAGLVAG+SAS PAKGGIGTMHAPNLANRYFRHVIHCKGC SA+KAF
Sbjct: 433 SLPEEPAVVEHAPAGLVAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCSSAIKAFQ 492
Query: 519 TWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRR 578
WKN LS L ALAIL +GRQW+ L SASLC GVYACSTAI+MNTTNFIR HRR
Sbjct: 493 IWKNVLSGVVVALAALAILVSGRQWKVLLLASASLCSVGVYACSTAIAMNTTNFIRVHRR 552
Query: 579 L 579
L
Sbjct: 553 L 553
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Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Pisum sativum (taxid: 3888) |
| >sp|Q9SK50|TIC55_ARATH Protein TIC 55, chloroplastic OS=Arabidopsis thaliana GN=TIC55 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9FYC2|PAO_ARATH Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8W496|PTC52_ARATH Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana GN=PTC52 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9ZWM5|CAO_CHLRE Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii GN=CAO PE=2 SV=2 | Back alignment and function description |
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| >sp|Q8S7E1|CAO_ORYSJ Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica GN=CAO PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9XJ38|CAO_DUNSA Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9AHG3|TSAM2_COMTE Putative toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM2 OS=Comamonas testosteroni GN=tsaM2 PE=5 SV=1 | Back alignment and function description |
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| >sp|Q9MBA1|CAO_ARATH Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=1 | Back alignment and function description |
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| >sp|O05616|VANA_PSEUH Vanillate O-demethylase oxygenase subunit OS=Pseudomonas sp. (strain HR199 / DSM 7063) GN=vanA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 579 | ||||||
| 255548670 | 552 | chlorophyll a oxygenase, putative [Ricin | 0.892 | 0.936 | 0.793 | 0.0 | |
| 75219721 | 553 | RecName: Full=Protein TIC 55, chloroplas | 0.829 | 0.867 | 0.825 | 0.0 | |
| 356507174 | 532 | PREDICTED: pheophorbide a oxygenase, chl | 0.841 | 0.915 | 0.808 | 0.0 | |
| 224143358 | 549 | predicted protein [Populus trichocarpa] | 0.908 | 0.958 | 0.764 | 0.0 | |
| 359475902 | 544 | PREDICTED: protein TIC 55, chloroplastic | 0.877 | 0.933 | 0.785 | 0.0 | |
| 357465983 | 552 | Rieske iron-sulfur protein Tic55 [Medica | 0.925 | 0.971 | 0.756 | 0.0 | |
| 224092649 | 556 | predicted protein [Populus trichocarpa] | 0.924 | 0.962 | 0.738 | 0.0 | |
| 356514868 | 540 | PREDICTED: pheophorbide a oxygenase, chl | 0.896 | 0.961 | 0.753 | 0.0 | |
| 449455677 | 542 | PREDICTED: protein TIC 55, chloroplastic | 0.911 | 0.974 | 0.699 | 0.0 | |
| 15224625 | 539 | translocon at the inner envelope membran | 0.915 | 0.983 | 0.706 | 0.0 |
| >gi|255548670|ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus communis] gi|223545335|gb|EEF46840.1| chlorophyll a oxygenase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/527 (79%), Positives = 457/527 (86%), Gaps = 10/527 (1%)
Query: 57 TPPTTGNVISPIKAHKLRKRTEPKLTKCHA----VTDMSSSAVPTPDDHKVLVGPASEEE 112
TP +++ PI H L+ R TKC+A V D S S V DDH VLVGP+SEEE
Sbjct: 32 TPTIKTHLLKPI-LHTLKIRH----TKCYAASSTVHDESRSGVVEADDHMVLVGPSSEEE 86
Query: 113 SRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHR 172
RGER VADYDWTEEWYPLYLTKDVPDDAPLGLTVFD+QIVLYKDG+GELRC++DRCPHR
Sbjct: 87 RRGERVVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDKQIVLYKDGEGELRCYEDRCPHR 146
Query: 173 LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 232
LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP +AKIP+SACV+TYE++ESQGVVW
Sbjct: 147 LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPTNAKIPQSACVKTYEIRESQGVVW 206
Query: 233 VWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDY 292
VWMS+KTPPN +KLPWFENFARPGFQD ST HELPYDHSILLENLMDPAHIPISHDRTD+
Sbjct: 207 VWMSRKTPPNLNKLPWFENFARPGFQDTSTTHELPYDHSILLENLMDPAHIPISHDRTDW 266
Query: 293 SAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESVDNKTGEK 352
SAKREDAQ L F+VTERTDRGFAG WGR+KD ++ NFLRFEAPCVLQNNR+ VD + G K
Sbjct: 267 SAKREDAQALRFKVTERTDRGFAGWWGRDKDPALLNFLRFEAPCVLQNNRDIVD-ENGVK 325
Query: 353 HYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNE 412
HY TGLFLCRPTGQGK+MLIVRFG T S K P WYFHQ+ASKVFEQDMGFLSSQNE
Sbjct: 326 HYFTGLFLCRPTGQGKAMLIVRFGGTKRSHIAKWIPQWYFHQNASKVFEQDMGFLSSQNE 385
Query: 413 VLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPA 472
VL+KEKVPTK LY NL+S DTWVAEYRKWMDK GHGMPY+FGHSTISLP+VPAVVEHAPA
Sbjct: 386 VLMKEKVPTKNLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPEVPAVVEHAPA 445
Query: 473 GLVAGVSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLT 532
GLVAGVSAS PAKGGIGTMHAPNL+NRYFRHVIHC+ C S VK F WKN+LS A + T
Sbjct: 446 GLVAGVSASSPAKGGIGTMHAPNLSNRYFRHVIHCRKCSSVVKGFEAWKNALSAIALVST 505
Query: 533 ALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMNTTNFIRTHRRL 579
ALAIL +GRQW+ F L+SA LCLAGVYAC+TAI+MNTTNFIRTHRRL
Sbjct: 506 ALAILASGRQWKPFLLLSAGLCLAGVYACTTAIAMNTTNFIRTHRRL 552
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75219721|sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske iron-sulfur protein TIC55; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 55; Short=PsTIC55; Flags: Precursor gi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein Tic55 [Pisum sativum] | Back alignment and taxonomy information |
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| >gi|356507174|ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224143358|ref|XP_002324928.1| predicted protein [Populus trichocarpa] gi|222866362|gb|EEF03493.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|359475902|ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-like [Vitis vinifera] gi|296082166|emb|CBI21171.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357465983|ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula] gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224092649|ref|XP_002309693.1| predicted protein [Populus trichocarpa] gi|222855669|gb|EEE93216.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356514868|ref|XP_003526124.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449455677|ref|XP_004145578.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus] gi|449485314|ref|XP_004157131.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|15224625|ref|NP_180055.1| translocon at the inner envelope membrane of chloroplasts 55-II [Arabidopsis thaliana] gi|75265982|sp|Q9SK50.1|TIC55_ARATH RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 55; Short=AtTIC55; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 55-II; Flags: Precursor gi|4559369|gb|AAD23030.1| putative Rieske iron-sulfur protein [Arabidopsis thaliana] gi|330252538|gb|AEC07632.1| translocon at the inner envelope membrane of chloroplasts 55-II [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 579 | ||||||
| TAIR|locus:2047329 | 539 | TIC55-II "translocon at the in | 0.858 | 0.922 | 0.725 | 1.8e-206 | |
| TAIR|locus:2082122 | 537 | ACD1 "ACCELERATED CELL DEATH 1 | 0.599 | 0.646 | 0.300 | 1.5e-41 | |
| TAIR|locus:2131406 | 559 | ACD1-LIKE "AT4G25650" [Arabido | 0.362 | 0.375 | 0.326 | 8e-37 | |
| TAIR|locus:2823671 | 536 | CH1 "CHLORINA 1" [Arabidopsis | 0.518 | 0.559 | 0.261 | 2e-22 | |
| UNIPROTKB|Q48IV9 | 354 | vanA "Vanillate monooxygenase, | 0.293 | 0.480 | 0.274 | 1.2e-14 | |
| UNIPROTKB|Q4KB09 | 352 | vanA "Vanillate O-demethylase, | 0.283 | 0.465 | 0.290 | 7.2e-13 | |
| UNIPROTKB|Q8G8B6 | 384 | carAa "Carbazole 1,9a-dioxygen | 0.309 | 0.466 | 0.294 | 6.7e-12 | |
| UNIPROTKB|D5IGG0 | 378 | carAa "Carbazole 1,9a-dioxygen | 0.303 | 0.465 | 0.284 | 5.1e-11 | |
| UNIPROTKB|P71875 | 386 | kshA "3-ketosteroid-9-alpha-mo | 0.271 | 0.406 | 0.262 | 2.6e-10 | |
| UNIPROTKB|Q4KAM4 | 363 | prnD "Aminopyrrolnitrin oxidas | 0.198 | 0.316 | 0.308 | 4.7e-10 |
| TAIR|locus:2047329 TIC55-II "translocon at the inner envelope membrane of chloroplasts 55-II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1997 (708.0 bits), Expect = 1.8e-206, P = 1.8e-206
Identities = 367/506 (72%), Positives = 417/506 (82%)
Query: 77 TEPKLTKCHAVTDMSSSAVP--TPDDHKVLVGPASEEESRGERRVADYDWTEEWYPLYLT 134
T+P+L + ++ +AV T VL+ P EEE R E VADYDWTEEWYPLYLT
Sbjct: 40 TKPRLRLLRR-SAVAGTAVSDQTEGGGDVLLNP--EEEKRVE--VADYDWTEEWYPLYLT 94
Query: 135 KDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQ 194
K+VP+DAPLGLTV+D+QIVLYKDG+G LRC++DRCPHRLAKLSEGQLIDGRLECLYHGWQ
Sbjct: 95 KNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQ 154
Query: 195 FEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFAR 254
FEGEGKCVKIPQLPA AKIP++ACV+TYEVK+SQGVVWVWMS KTPPNP+KLPWFENFAR
Sbjct: 155 FEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPNPEKLPWFENFAR 214
Query: 255 PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGF 314
PGF D+ST HELPYDHSILLENLMDPAH+PISHDRTD++AKREDAQPL FEVTER++RGF
Sbjct: 215 PGFFDISTTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLVFEVTERSNRGF 274
Query: 315 AGQWGREKDGSM-PNFLRFEAPCVLQNNRESVDNKTGEKHYSTGLFLCRPTGQGKSMLIV 373
AG WGREK+G N LRF+APCVLQNNRE + K G K+Y +GLFLCRPTGQGKSMLIV
Sbjct: 275 AGTWGREKEGGKGSNLLRFDAPCVLQNNRE-FEGKDGVKNYFSGLFLCRPTGQGKSMLIV 333
Query: 374 RFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLKEKVPTKELYFNLRSIDT 433
RFG T SP + + P W++HQ+A KVFEQDMGFLSSQNEVL+KEKVPTK+LY NL+S DT
Sbjct: 334 RFGVTKRSPLVSVLPQWFWHQNACKVFEQDMGFLSSQNEVLMKEKVPTKDLYLNLKSSDT 393
Query: 434 WVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGIGTMHA 493
WVAEYRKWMDK GHGMPY+FGH TISLPKVP VVEHAPAGL+A +SAS PAKGGIGTMHA
Sbjct: 394 WVAEYRKWMDKVGHGMPYHFGHRTISLPKVPPVVEHAPAGLIAALSASYPAKGGIGTMHA 453
Query: 494 PNLANRYFRHVIHCKGCRSAVKAFNTWKNXXXXXXXXXXXXXXXXXXRQWRAFCLVSASL 553
PNLANRYFRH+IHC+ C + +K+F WKN RQW+A L SA+L
Sbjct: 454 PNLANRYFRHIIHCRSCSNVIKSFELWKNILSATAVALTALAILVVSRQWKAVLLGSAAL 513
Query: 554 CLAGVYACSTAISMNTTNFIRTHRRL 579
C A Y C AI++NT NFIRTHRRL
Sbjct: 514 CSAAAYTCLRAINLNTNNFIRTHRRL 539
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| TAIR|locus:2082122 ACD1 "ACCELERATED CELL DEATH 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2131406 ACD1-LIKE "AT4G25650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2823671 CH1 "CHLORINA 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q48IV9 vanA "Vanillate monooxygenase, oxygenase subunit" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q4KB09 vanA "Vanillate O-demethylase, oxygenase subunit" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8G8B6 carAa "Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa" [Pseudomonas resinovorans (taxid:53412)] | Back alignment and assigned GO terms |
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| UNIPROTKB|D5IGG0 carAa "Carbazole 1,9a-dioxygenase, terminal oxygenase component CarAa" [Sphingomonas sp. (taxid:28214)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P71875 kshA "3-ketosteroid-9-alpha-monooxygenase oxygenase subunit" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q4KAM4 prnD "Aminopyrrolnitrin oxidase PrnD" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SK50 | TIC55_ARATH | No assigned EC number | 0.7064 | 0.9153 | 0.9833 | yes | no |
| O49931 | TIC55_PEA | No assigned EC number | 0.8253 | 0.8290 | 0.8679 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.13.12.14 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.XVIII.1983.1 | hypothetical protein (476 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 579 | |||
| cd04338 | 134 | cd04338, Rieske_RO_Alpha_Tic55, Tic55 is a 55kDa L | 3e-86 | |
| PLN02518 | 539 | PLN02518, PLN02518, pheophorbide a oxygenase | 3e-59 | |
| cd03480 | 138 | cd03480, Rieske_RO_Alpha_PaO, Rieske non-heme iron | 2e-36 | |
| COG4638 | 367 | COG4638, HcaE, Phenylpropionate dioxygenase and re | 1e-34 | |
| cd03469 | 118 | cd03469, Rieske_RO_Alpha_N, Rieske non-heme iron o | 3e-32 | |
| cd03532 | 116 | cd03532, Rieske_RO_Alpha_VanA_DdmC, Rieske non-hem | 2e-28 | |
| pfam08417 | 91 | pfam08417, PaO, Pheophorbide a oxygenase | 4e-27 | |
| cd04337 | 129 | cd04337, Rieske_RO_Alpha_Cao, Cao (chlorophyll a o | 3e-26 | |
| cd03479 | 144 | cd03479, Rieske_RO_Alpha_PhDO_like, Rieske non-hem | 5e-25 | |
| PLN02281 | 536 | PLN02281, PLN02281, chlorophyllide a oxygenase | 7e-24 | |
| pfam00355 | 99 | pfam00355, Rieske, Rieske [2Fe-2S] domain | 2e-19 | |
| PLN00095 | 394 | PLN00095, PLN00095, chlorophyllide a oxygenase; Pr | 1e-18 | |
| cd03467 | 98 | cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster | 4e-18 | |
| cd03537 | 123 | cd03537, Rieske_RO_Alpha_PrnD, This alignment mode | 3e-16 | |
| cd03548 | 136 | cd03548, Rieske_RO_Alpha_OMO_CARDO, Rieske non-hem | 4e-16 | |
| cd03531 | 115 | cd03531, Rieske_RO_Alpha_KSH, The alignment model | 8e-16 | |
| COG2146 | 106 | COG2146, {NirD}, Ferredoxin subunits of nitrite re | 5e-14 | |
| cd03528 | 98 | cd03528, Rieske_RO_ferredoxin, Rieske non-heme iro | 5e-13 | |
| TIGR02378 | 105 | TIGR02378, nirD_assim_sml, nitrite reductase [NAD( | 8e-09 | |
| cd03478 | 95 | cd03478, Rieske_AIFL_N, AIFL (apoptosis-inducing f | 2e-08 | |
| cd03474 | 108 | cd03474, Rieske_T4moC, Toluene-4-monooxygenase eff | 3e-08 | |
| cd03530 | 98 | cd03530, Rieske_NirD_small_Bacillus, Small subunit | 3e-07 | |
| cd03535 | 123 | cd03535, Rieske_RO_Alpha_NDO, Rieske non-heme iron | 3e-04 | |
| cd03538 | 146 | cd03538, Rieske_RO_Alpha_AntDO, Rieske non-heme ir | 4e-04 | |
| cd08878 | 196 | cd08878, RHO_alpha_C_DMO-like, C-terminal catalyti | 7e-04 | |
| PRK09965 | 106 | PRK09965, PRK09965, 3-phenylpropionate dioxygenase | 0.001 | |
| TIGR03229 | 433 | TIGR03229, benzo_1_2_benA, benzoate 1,2-dioxygenas | 0.002 | |
| cd03545 | 150 | cd03545, Rieske_RO_Alpha_OHBDO_like, Rieske non-he | 0.003 | |
| cd03541 | 118 | cd03541, Rieske_RO_Alpha_CMO, Rieske non-heme iron | 0.003 | |
| cd03529 | 103 | cd03529, Rieske_NirD, Assimilatory nitrite reducta | 0.003 | |
| cd03542 | 123 | cd03542, Rieske_RO_Alpha_HBDO, Rieske non-heme iro | 0.004 |
| >gnl|CDD|239830 cd04338, Rieske_RO_Alpha_Tic55, Tic55 is a 55kDa LLS1-related non-heme iron oxygenase associated with protein transport through the plant inner chloroplast membrane | Back alignment and domain information |
|---|
Score = 263 bits (673), Expect = 3e-86
Identities = 97/132 (73%), Positives = 115/132 (87%)
Query: 112 ESRGERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPH 171
E VA+YDW EEWYPLYL KDVP DAPLGL+V+D+ VL++D G+LRC +DRCPH
Sbjct: 2 EFETPENVAEYDWREEWYPLYLLKDVPTDAPLGLSVYDEPFVLFRDQNGQLRCLEDRCPH 61
Query: 172 RLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVV 231
RLAKLSEGQLIDG+LECLYHGWQF GEGKCVKIPQLPADAKIP++ACV++YEV++SQGVV
Sbjct: 62 RLAKLSEGQLIDGKLECLYHGWQFGGEGKCVKIPQLPADAKIPKNACVKSYEVRDSQGVV 121
Query: 232 WVWMSQKTPPNP 243
W+WMS+ TPP+
Sbjct: 122 WMWMSEATPPDE 133
|
This domain represents the N-terminal Rieske domain of the Tic55 oxygenase alpha subunit. Tic55 is closely related to the oxygenase alpha subunits of a small subfamily of enzymes found in plants as well as oxygenic cyanobacterial photosynthesizers including LLS1 (lethal leaf spot 1, also known as PaO), Ptc52, and ACD1 (accelerated cell death 1). ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. Length = 134 |
| >gnl|CDD|215283 PLN02518, PLN02518, pheophorbide a oxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|239562 cd03480, Rieske_RO_Alpha_PaO, Rieske non-heme iron oxygenase (RO) family, Pheophorbide a oxygenase (PaO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of a small subfamily of enzymes found in plants as well as oxygenic cyanobacterial photosynthesizers including LLS1 (lethal leaf spot 1, also known as PaO) and ACD1 (accelerated cell death 1) | Back alignment and domain information |
|---|
| >gnl|CDD|226985 COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|239551 cd03469, Rieske_RO_Alpha_N, Rieske non-heme iron oxygenase (RO) family, N-terminal Rieske domain of the oxygenase alpha subunit; The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms | Back alignment and domain information |
|---|
| >gnl|CDD|239608 cd03532, Rieske_RO_Alpha_VanA_DdmC, Rieske non-heme iron oxygenase (RO) family, Vanillate-O-demethylase oxygenase (VanA) and dicamba O-demethylase oxygenase (DdmC) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|219832 pfam08417, PaO, Pheophorbide a oxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|239829 cd04337, Rieske_RO_Alpha_Cao, Cao (chlorophyll a oxygenase) is a rieske non-heme iron-sulfur protein located within the plastid-envelope inner and thylakoid membranes, that catalyzes the conversion of chlorophyllide a to chlorophyllide b | Back alignment and domain information |
|---|
| >gnl|CDD|239561 cd03479, Rieske_RO_Alpha_PhDO_like, Rieske non-heme iron oxygenase (RO) family, Phthalate 4,5-dioxygenase (PhDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of PhDO and similar proteins including 3-chlorobenzoate 3,4-dioxygenase (CBDO), phenoxybenzoate dioxygenase (POB-dioxygenase) and 3-nitrobenzoate oxygenase (MnbA) | Back alignment and domain information |
|---|
| >gnl|CDD|177920 PLN02281, PLN02281, chlorophyllide a oxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215875 pfam00355, Rieske, Rieske [2Fe-2S] domain | Back alignment and domain information |
|---|
| >gnl|CDD|165668 PLN00095, PLN00095, chlorophyllide a oxygenase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239550 cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes | Back alignment and domain information |
|---|
| >gnl|CDD|239611 cd03537, Rieske_RO_Alpha_PrnD, This alignment model represents the N-terminal rieske domain of the oxygenase alpha subunit of aminopyrrolnitrin oxygenase (PrnD) | Back alignment and domain information |
|---|
| >gnl|CDD|239617 cd03548, Rieske_RO_Alpha_OMO_CARDO, Rieske non-heme iron oxygenase (RO) family, 2-Oxoquinoline 8-monooxygenase (OMO) and Carbazole 1,9a-dioxygenase (CARDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|239607 cd03531, Rieske_RO_Alpha_KSH, The alignment model represents the N-terminal rieske iron-sulfur domain of KshA, the oxygenase component of 3-ketosteroid 9-alpha-hydroxylase (KSH) | Back alignment and domain information |
|---|
| >gnl|CDD|225057 COG2146, {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|239604 cd03528, Rieske_RO_ferredoxin, Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO) | Back alignment and domain information |
|---|
| >gnl|CDD|131431 TIGR02378, nirD_assim_sml, nitrite reductase [NAD(P)H], small subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239560 cd03478, Rieske_AIFL_N, AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox) | Back alignment and domain information |
|---|
| >gnl|CDD|239556 cd03474, Rieske_T4moC, Toluene-4-monooxygenase effector protein complex (T4mo), Rieske ferredoxin subunit; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >gnl|CDD|239606 cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain | Back alignment and domain information |
|---|
| >gnl|CDD|239609 cd03535, Rieske_RO_Alpha_NDO, Rieske non-heme iron oxygenase (RO) family, Nathphalene 1,2-dioxygenase (NDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|239612 cd03538, Rieske_RO_Alpha_AntDO, Rieske non-heme iron oxygenase (RO) family, Anthranilate 1,2-dioxygenase (AntDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|176887 cd08878, RHO_alpha_C_DMO-like, C-terminal catalytic domain of the oxygenase alpha subunit of dicamba O-demethylase and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >gnl|CDD|170182 PRK09965, PRK09965, 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|132273 TIGR03229, benzo_1_2_benA, benzoate 1,2-dioxygenase, large subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239616 cd03545, Rieske_RO_Alpha_OHBDO_like, Rieske non-heme iron oxygenase (RO) family, Ortho-halobenzoate-1,2-dioxygenase (OHBDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of OHBDO, salicylate 5-hydroxylase (S5H), terephthalate 1,2-dioxygenase system (TERDOS) and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|239614 cd03541, Rieske_RO_Alpha_CMO, Rieske non-heme iron oxygenase (RO) family, Choline monooxygenase (CMO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >gnl|CDD|239605 cd03529, Rieske_NirD, Assimilatory nitrite reductase (NirD) family, Rieske domain; Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium | Back alignment and domain information |
|---|
| >gnl|CDD|239615 cd03542, Rieske_RO_Alpha_HBDO, Rieske non-heme iron oxygenase (RO) family, 2-Halobenzoate 1,2-dioxygenase (HBDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 579 | |||
| PLN02518 | 539 | pheophorbide a oxygenase | 100.0 | |
| PLN02281 | 536 | chlorophyllide a oxygenase | 100.0 | |
| PLN00095 | 394 | chlorophyllide a oxygenase; Provisional | 100.0 | |
| COG4638 | 367 | HcaE Phenylpropionate dioxygenase and related ring | 100.0 | |
| TIGR03229 | 433 | benzo_1_2_benA benzoate 1,2-dioxygenase, large sub | 100.0 | |
| TIGR03228 | 438 | anthran_1_2_A anthranilate 1,2-dioxygenase, large | 100.0 | |
| cd04338 | 134 | Rieske_RO_Alpha_Tic55 Tic55 is a 55kDa LLS1-relate | 99.98 | |
| cd03537 | 123 | Rieske_RO_Alpha_PrnD This alignment model represen | 99.97 | |
| cd03545 | 150 | Rieske_RO_Alpha_OHBDO_like Rieske non-heme iron ox | 99.96 | |
| cd03480 | 138 | Rieske_RO_Alpha_PaO Rieske non-heme iron oxygenase | 99.96 | |
| cd04337 | 129 | Rieske_RO_Alpha_Cao Cao (chlorophyll a oxygenase) | 99.96 | |
| cd03531 | 115 | Rieske_RO_Alpha_KSH The alignment model represents | 99.96 | |
| cd03479 | 144 | Rieske_RO_Alpha_PhDO_like Rieske non-heme iron oxy | 99.96 | |
| cd03548 | 136 | Rieske_RO_Alpha_OMO_CARDO Rieske non-heme iron oxy | 99.95 | |
| cd03532 | 116 | Rieske_RO_Alpha_VanA_DdmC Rieske non-heme iron oxy | 99.95 | |
| cd03538 | 146 | Rieske_RO_Alpha_AntDO Rieske non-heme iron oxygena | 99.95 | |
| cd03472 | 128 | Rieske_RO_Alpha_BPDO_like Rieske non-heme iron oxy | 99.94 | |
| cd03541 | 118 | Rieske_RO_Alpha_CMO Rieske non-heme iron oxygenase | 99.94 | |
| cd03539 | 129 | Rieske_RO_Alpha_S5H This alignment model represent | 99.94 | |
| cd03469 | 118 | Rieske_RO_Alpha_N Rieske non-heme iron oxygenase ( | 99.93 | |
| cd03535 | 123 | Rieske_RO_Alpha_NDO Rieske non-heme iron oxygenase | 99.93 | |
| cd03536 | 123 | Rieske_RO_Alpha_DTDO This alignment model represen | 99.92 | |
| cd03528 | 98 | Rieske_RO_ferredoxin Rieske non-heme iron oxygenas | 99.91 | |
| cd03530 | 98 | Rieske_NirD_small_Bacillus Small subunit of nitrit | 99.91 | |
| cd03474 | 108 | Rieske_T4moC Toluene-4-monooxygenase effector prot | 99.9 | |
| TIGR02377 | 101 | MocE_fam_FeS Rieske [2Fe-2S] domain protein, MocE | 99.9 | |
| cd03529 | 103 | Rieske_NirD Assimilatory nitrite reductase (NirD) | 99.9 | |
| cd03542 | 123 | Rieske_RO_Alpha_HBDO Rieske non-heme iron oxygenas | 99.9 | |
| TIGR02378 | 105 | nirD_assim_sml nitrite reductase [NAD(P)H], small | 99.89 | |
| PRK09965 | 106 | 3-phenylpropionate dioxygenase ferredoxin subunit; | 99.88 | |
| cd03478 | 95 | Rieske_AIFL_N AIFL (apoptosis-inducing factor like | 99.88 | |
| PF13806 | 104 | Rieske_2: Rieske-like [2Fe-2S] domain; PDB: 2JO6_A | 99.85 | |
| PRK09511 | 108 | nirD nitrite reductase small subunit; Provisional | 99.84 | |
| PF00355 | 97 | Rieske: Rieske [2Fe-2S] domain; InterPro: IPR01794 | 99.84 | |
| cd03467 | 98 | Rieske Rieske domain; a [2Fe-2S] cluster binding d | 99.82 | |
| COG2146 | 106 | {NirD} Ferredoxin subunits of nitrite reductase an | 99.82 | |
| cd03477 | 91 | Rieske_YhfW_C YhfW family, C-terminal Rieske domai | 99.79 | |
| cd08878 | 196 | RHO_alpha_C_DMO-like C-terminal catalytic domain o | 99.77 | |
| cd03476 | 126 | Rieske_ArOX_small Small subunit of Arsenite oxidas | 99.75 | |
| cd03471 | 126 | Rieske_cytochrome_b6f Iron-sulfur protein (ISP) co | 99.69 | |
| TIGR02694 | 129 | arsenite_ox_S arsenite oxidase, small subunit. Thi | 99.65 | |
| cd03473 | 107 | Rieske_CMP_Neu5Ac_hydrolase_N Cytidine monophospha | 99.65 | |
| PF08417 | 92 | PaO: Pheophorbide a oxygenase; InterPro: IPR013626 | 99.63 | |
| cd03470 | 126 | Rieske_cytochrome_bc1 Iron-sulfur protein (ISP) co | 99.57 | |
| cd00680 | 188 | RHO_alpha_C C-terminal catalytic domain of the oxy | 99.57 | |
| PRK13474 | 178 | cytochrome b6-f complex iron-sulfur subunit; Provi | 99.48 | |
| cd08885 | 190 | RHO_alpha_C_1 C-terminal catalytic domain of the o | 99.4 | |
| cd08883 | 175 | RHO_alpha_C_CMO-like C-terminal catalytic domain o | 99.32 | |
| cd08886 | 182 | RHO_alpha_C_2 C-terminal catalytic domain of the o | 99.31 | |
| cd08887 | 185 | RHO_alpha_C_3 C-terminal catalytic domain of the o | 99.27 | |
| TIGR01416 | 174 | Rieske_proteo ubiquinol-cytochrome c reductase, ir | 99.26 | |
| cd08884 | 205 | RHO_alpha_C_GbcA-like C-terminal catalytic domain | 99.26 | |
| PF00848 | 209 | Ring_hydroxyl_A: Ring hydroxylating alpha subunit | 99.22 | |
| cd03475 | 171 | Rieske_SoxF_SoxL SoxF and SoxL family, Rieske doma | 98.87 | |
| cd08880 | 222 | RHO_alpha_C_ahdA1c-like C-terminal catalytic domai | 98.59 | |
| PF11723 | 240 | Aromatic_hydrox: Homotrimeric ring hydroxylase; In | 98.5 | |
| cd08882 | 243 | RHO_alpha_C_MupW-like C-terminal catalytic domain | 98.48 | |
| COG0723 | 177 | QcrA Rieske Fe-S protein [Energy production and co | 98.43 | |
| cd08881 | 206 | RHO_alpha_C_NDO-like C-terminal catalytic domain o | 98.1 | |
| KOG1671 | 210 | consensus Ubiquinol cytochrome c reductase, subuni | 98.04 | |
| cd08879 | 237 | RHO_alpha_C_AntDO-like C-terminal catalytic domain | 98.02 | |
| TIGR03171 | 321 | soxL2 Rieske iron-sulfur protein SoxL2. This iron- | 97.79 | |
| KOG1336 | 478 | consensus Monodehydroascorbate/ferredoxin reductas | 96.57 |
| >PLN02518 pheophorbide a oxygenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-87 Score=732.55 Aligned_cols=425 Identities=31% Similarity=0.596 Sum_probs=344.9
Q ss_pred hcccccccccCCeEEeeecCCCCCCCcEEEEEcCEEEEEEEe-CCCeEEeecCCCCCCCCcccCCccc-cceEEccCcce
Q 037348 116 ERRVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GKGELRCHQDRCPHRLAKLSEGQLI-DGRLECLYHGW 193 (579)
Q Consensus 116 ~~~e~~~~~~~~W~~v~~~~dl~~~~~~~~~l~g~~lvl~R~-~~G~~~a~~d~CpHrgapLs~G~v~-~g~l~CpyHGW 193 (579)
...+.+++|+++||+||.++||++++++.++++|++|||||+ .+|+++||+|+||||+++||+|+++ ++.|+||||||
T Consensus 79 ~~~~~~f~~~~~Wy~Va~~~dL~~g~p~~~~llG~~lVl~Rd~~~G~~~A~~d~CPHRgapLS~G~v~~~g~L~CpYHGW 158 (539)
T PLN02518 79 ESSDSKFSWRDHWYPVSLVEDLDPSVPTPFQLLGRDLVLWKDPNQGEWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGW 158 (539)
T ss_pred cccchhhhhhhhCEEEEEHHHCCCCCeEEEEECCEEEEEEEECCCCeEEEEcccCcCcCCCcccceecCCCEEEcCCCCC
Confidence 345678999999999999999988889999999999999998 8999999999999999999999996 78999999999
Q ss_pred EEcCCCceeecCCCCCCC-----CCCccCccceEEEEEecCeEEEEcCCCC--CCCCCCCCccc-cccCCCceeeeEEEE
Q 037348 194 QFEGEGKCVKIPQLPADA-----KIPRSACVRTYEVKESQGVVWVWMSQKT--PPNPDKLPWFE-NFARPGFQDVSTIHE 265 (579)
Q Consensus 194 ~Fd~dG~c~~iP~~~~~~-----~~~~~~~l~~ypv~~~~G~V~V~~~~~~--~~~~~~lP~~~-~~~~~~~~~~~~~~~ 265 (579)
+||++|+|+.||+.+... .+++++|+++|||+|++|+||||+++++ .++...+|.++ ++++++|......++
T Consensus 159 ~Fd~~G~c~~IP~~~~~~~~~~~~~~~~a~v~sypv~e~~GlIwV~~~~~~~~~a~~~~~P~~~~~~~~~~~~~~~~~~~ 238 (539)
T PLN02518 159 SFDGCGSCTRIPQAAPEGPEARAVKSPRACAIKFPTMVSQGLLFVWPDENGWERAQATKPPMLPDEFDDPEFSTVTIQRD 238 (539)
T ss_pred EEcCCCCeeecccccccccccccccCcccccceEeEEEECCEEEEEeCCccccccccccCCCCcccccCCCceeEEEEEE
Confidence 999999999999865332 2456788999999999999999998752 34456778774 778888987777889
Q ss_pred eccChHhHhhcCCCCCCCcccccccccccccccCCCceEEEeecccCCcccccCCCCCCCCceEEEEecCeeeeeeceee
Q 037348 266 LPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQWGREKDGSMPNFLRFEAPCVLQNNRESV 345 (579)
Q Consensus 266 ~~~~~~~lvEN~lD~~H~pfvH~~~~~~~~r~~~~p~~~~v~~~~~~Gf~~~~~~~~~~~~~~~~~F~~P~~~~~~~~~~ 345 (579)
++|+|++++||++|++|++|+|++++ ++++++.+..++++..+..||.+.+. .+.+...+|.+||++.+.+...
T Consensus 239 ~~~~~~~l~EN~lD~sH~pfvH~~~~--G~~~~~~~~~~~v~~~~~~Gf~g~~~----~~~~~~~~F~~P~~~~~~~~~~ 312 (539)
T PLN02518 239 LFYGYDTLMENVSDPSHIDFAHHKVT--GRRDRAKPLPFKVESSGPWGFAGANS----DNPRITAKFVAPCYYINKIEID 312 (539)
T ss_pred EecCchhHHHhCCccchhceeccccc--cCccccccccceEEEcCCCccccccc----CCCceEEEEECCeEEEEeeeee
Confidence 99999999999999999999999986 45667677778887655567765331 2344568899999987765442
Q ss_pred cC--CCCC-eeeEEEEEEeeeCCCCeEEEEEEEecCCC------CCccccCchhHhhHhhhhHHHHHHHHHHHHHHhhhh
Q 037348 346 DN--KTGE-KHYSTGLFLCRPTGQGKSMLIVRFGTTGT------SPWIKLFPDWYFHQSASKVFEQDMGFLSSQNEVLLK 416 (579)
Q Consensus 346 ~~--~~G~-~~~~~~v~~~~Pv~pg~trli~~f~~~~~------~~~~k~~p~W~~h~~~~~VldeD~~iLe~Qq~~l~~ 416 (579)
.. ..|. ...+..+++++|+++|+||+++++.+++. ..+.+++|+|+.|..+++||+||+.+||.||+.++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~tP~s~g~tr~f~~~~Rnf~~~~~~~~~~~k~~PrW~~h~~~n~Vl~~D~~~lh~Qe~~~~~ 392 (539)
T PLN02518 313 TKLPIVGDQKWVIWICSFNVPMAPGKTRSIVCSARNFFQFSMPGPAWWQLVPRWYEHWTSNKVYDGDMIVLQGQEKIFLS 392 (539)
T ss_pred ccccCCCCcceEEEEEEEEEECCCCeEEEEEEecccchhccccchhhhhcCchHHHHhhhccchHhHHHHHHHHHHHHhh
Confidence 10 0111 12244567889999999999988777653 123489999999999999999999999999999876
Q ss_pred cCC--------CCccccccccccCHHHHHHHHHHHHhCCCCCCcCCCcCCCCCCCccccccCCCccccccccCCCCCCCC
Q 037348 417 EKV--------PTKELYFNLRSIDTWVAEYRKWMDKAGHGMPYYFGHSTISLPKVPAVVEHAPAGLVAGVSASLPAKGGI 488 (579)
Q Consensus 417 ~~~--------~~k~~y~~~~~sD~~VvafRrWL~k~g~g~P~~~g~~~~~lp~~p~~~~~~p~~~~~~~~~~~p~~~~~ 488 (579)
.+. .++..|++|+++|++|++|||||+++|+|+|.|++..+.. ++ +|+
T Consensus 393 ~~~e~~~~v~~~w~k~~~~Pt~aD~~viayR~Wl~~~g~g~~~w~~~~~~~-~~-------------------lp~---- 448 (539)
T PLN02518 393 KSGEGSADVNAQYTKLTFTPTQADRFVLAFRNWLRRHGNSQPEWFGETSSQ-QP-------------------LPS---- 448 (539)
T ss_pred ccccccccchhhhhhhccCCCchhHHHHHHHHHHHHhCcCCCCcccCCccc-CC-------------------CCC----
Confidence 543 2334555579999999999999999999888887643211 11 111
Q ss_pred CCCCchhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 037348 489 GTMHAPNLANRYFRHVIHCKGCRSAVKAFNTWKNSLSTAAALLTALAILGAGRQWRAFCLVSASLCLAGVYACSTAISMN 568 (579)
Q Consensus 489 ~~~~~~qllDRy~~HT~~C~sC~~Alk~~~~l~~~l~~~~va~~~~a~~~~~~~~~~~~~~~a~~~~a~~~~~~~~~~~~ 568 (579)
..++++||||||||||+||+||++|||+|+++|+++++++++++++++++...++++++++++++++++.+.+.+ +
T Consensus 449 ~~~~~~~lldRy~~Ht~~C~SC~~Alk~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~ 524 (539)
T PLN02518 449 TVLSKRQMLDRFEQHTLNCSSCKGAYKAFQTLQKVLIGATVVFAATAGIPSDVQLRLILAGLALISAASAYALKE----L 524 (539)
T ss_pred CCCCHHHHhHHHHhhCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHH----H
Confidence 124789999999999999999999999999999999999999999888888878888888877777777776554 8
Q ss_pred hccchh
Q 037348 569 TTNFIR 574 (579)
Q Consensus 569 ~~~~~~ 574 (579)
+++|+.
T Consensus 525 ~~~f~~ 530 (539)
T PLN02518 525 EKNFVF 530 (539)
T ss_pred Hhhcee
Confidence 888875
|
|
| >PLN02281 chlorophyllide a oxygenase | Back alignment and domain information |
|---|
| >PLN00095 chlorophyllide a oxygenase; Provisional | Back alignment and domain information |
|---|
| >COG4638 HcaE Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03229 benzo_1_2_benA benzoate 1,2-dioxygenase, large subunit | Back alignment and domain information |
|---|
| >TIGR03228 anthran_1_2_A anthranilate 1,2-dioxygenase, large subunit | Back alignment and domain information |
|---|
| >cd04338 Rieske_RO_Alpha_Tic55 Tic55 is a 55kDa LLS1-related non-heme iron oxygenase associated with protein transport through the plant inner chloroplast membrane | Back alignment and domain information |
|---|
| >cd03537 Rieske_RO_Alpha_PrnD This alignment model represents the N-terminal rieske domain of the oxygenase alpha subunit of aminopyrrolnitrin oxygenase (PrnD) | Back alignment and domain information |
|---|
| >cd03545 Rieske_RO_Alpha_OHBDO_like Rieske non-heme iron oxygenase (RO) family, Ortho-halobenzoate-1,2-dioxygenase (OHBDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of OHBDO, salicylate 5-hydroxylase (S5H), terephthalate 1,2-dioxygenase system (TERDOS) and similar proteins | Back alignment and domain information |
|---|
| >cd03480 Rieske_RO_Alpha_PaO Rieske non-heme iron oxygenase (RO) family, Pheophorbide a oxygenase (PaO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of a small subfamily of enzymes found in plants as well as oxygenic cyanobacterial photosynthesizers including LLS1 (lethal leaf spot 1, also known as PaO) and ACD1 (accelerated cell death 1) | Back alignment and domain information |
|---|
| >cd04337 Rieske_RO_Alpha_Cao Cao (chlorophyll a oxygenase) is a rieske non-heme iron-sulfur protein located within the plastid-envelope inner and thylakoid membranes, that catalyzes the conversion of chlorophyllide a to chlorophyllide b | Back alignment and domain information |
|---|
| >cd03531 Rieske_RO_Alpha_KSH The alignment model represents the N-terminal rieske iron-sulfur domain of KshA, the oxygenase component of 3-ketosteroid 9-alpha-hydroxylase (KSH) | Back alignment and domain information |
|---|
| >cd03479 Rieske_RO_Alpha_PhDO_like Rieske non-heme iron oxygenase (RO) family, Phthalate 4,5-dioxygenase (PhDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of PhDO and similar proteins including 3-chlorobenzoate 3,4-dioxygenase (CBDO), phenoxybenzoate dioxygenase (POB-dioxygenase) and 3-nitrobenzoate oxygenase (MnbA) | Back alignment and domain information |
|---|
| >cd03548 Rieske_RO_Alpha_OMO_CARDO Rieske non-heme iron oxygenase (RO) family, 2-Oxoquinoline 8-monooxygenase (OMO) and Carbazole 1,9a-dioxygenase (CARDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03532 Rieske_RO_Alpha_VanA_DdmC Rieske non-heme iron oxygenase (RO) family, Vanillate-O-demethylase oxygenase (VanA) and dicamba O-demethylase oxygenase (DdmC) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03538 Rieske_RO_Alpha_AntDO Rieske non-heme iron oxygenase (RO) family, Anthranilate 1,2-dioxygenase (AntDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03472 Rieske_RO_Alpha_BPDO_like Rieske non-heme iron oxygenase (RO) family, Biphenyl dioxygenase (BPDO)-like subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; composed of the oxygenase alpha subunits of BPDO and similar proteins including cumene dioxygenase (CumDO), nitrobenzene dioxygenase (NBDO), alkylbenzene dioxygenase (AkbDO) and dibenzofuran 4,4a-dioxygenase (DFDO) | Back alignment and domain information |
|---|
| >cd03541 Rieske_RO_Alpha_CMO Rieske non-heme iron oxygenase (RO) family, Choline monooxygenase (CMO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03539 Rieske_RO_Alpha_S5H This alignment model represents the N-terminal rieske iron-sulfur domain of the oxygenase alpha subunit (NagG) of salicylate 5-hydroxylase (S5H) | Back alignment and domain information |
|---|
| >cd03469 Rieske_RO_Alpha_N Rieske non-heme iron oxygenase (RO) family, N-terminal Rieske domain of the oxygenase alpha subunit; The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms | Back alignment and domain information |
|---|
| >cd03535 Rieske_RO_Alpha_NDO Rieske non-heme iron oxygenase (RO) family, Nathphalene 1,2-dioxygenase (NDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >cd03536 Rieske_RO_Alpha_DTDO This alignment model represents the N-terminal rieske domain of the oxygenase alpha subunit (DitA) of diterpenoid dioxygenase (DTDO) | Back alignment and domain information |
|---|
| >cd03528 Rieske_RO_ferredoxin Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO) | Back alignment and domain information |
|---|
| >cd03530 Rieske_NirD_small_Bacillus Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain | Back alignment and domain information |
|---|
| >cd03474 Rieske_T4moC Toluene-4-monooxygenase effector protein complex (T4mo), Rieske ferredoxin subunit; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >TIGR02377 MocE_fam_FeS Rieske [2Fe-2S] domain protein, MocE subfamily | Back alignment and domain information |
|---|
| >cd03529 Rieske_NirD Assimilatory nitrite reductase (NirD) family, Rieske domain; Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium | Back alignment and domain information |
|---|
| >cd03542 Rieske_RO_Alpha_HBDO Rieske non-heme iron oxygenase (RO) family, 2-Halobenzoate 1,2-dioxygenase (HBDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth | Back alignment and domain information |
|---|
| >TIGR02378 nirD_assim_sml nitrite reductase [NAD(P)H], small subunit | Back alignment and domain information |
|---|
| >PRK09965 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional | Back alignment and domain information |
|---|
| >cd03478 Rieske_AIFL_N AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox) | Back alignment and domain information |
|---|
| >PF13806 Rieske_2: Rieske-like [2Fe-2S] domain; PDB: 2JO6_A 3C0D_A 3D89_A 2JZA_A | Back alignment and domain information |
|---|
| >PRK09511 nirD nitrite reductase small subunit; Provisional | Back alignment and domain information |
|---|
| >PF00355 Rieske: Rieske [2Fe-2S] domain; InterPro: IPR017941 There are multiple types of iron-sulphur clusters which are grouped into three main categories based on their atomic content: [2Fe-2S], [3Fe-4S], [4Fe-4S] (see PDOC00176 from PROSITEDOC), and other hybrid or mixed metal types | Back alignment and domain information |
|---|
| >cd03467 Rieske Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes | Back alignment and domain information |
|---|
| >COG2146 {NirD} Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >cd03477 Rieske_YhfW_C YhfW family, C-terminal Rieske domain; YhfW is a protein of unknown function with an N-terminal DadA-like (glycine/D-amino acid dehydrogenase) domain and a C-terminal Rieske domain | Back alignment and domain information |
|---|
| >cd08878 RHO_alpha_C_DMO-like C-terminal catalytic domain of the oxygenase alpha subunit of dicamba O-demethylase and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >cd03476 Rieske_ArOX_small Small subunit of Arsenite oxidase (ArOX) family, Rieske domain; ArOX is a molybdenum/iron protein involved in the detoxification of arsenic, oxidizing it to arsenate | Back alignment and domain information |
|---|
| >cd03471 Rieske_cytochrome_b6f Iron-sulfur protein (ISP) component of the b6f complex family, Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >TIGR02694 arsenite_ox_S arsenite oxidase, small subunit | Back alignment and domain information |
|---|
| >cd03473 Rieske_CMP_Neu5Ac_hydrolase_N Cytidine monophosphate-N-acetylneuraminic acid (CMP Neu5Ac) hydroxylase family, N-terminal Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >PF08417 PaO: Pheophorbide a oxygenase; InterPro: IPR013626 This domain is found in bacterial and plant proteins to the C terminus of a Rieske 2Fe-2S domain (IPR005806 from INTERPRO) | Back alignment and domain information |
|---|
| >cd03470 Rieske_cytochrome_bc1 Iron-sulfur protein (ISP) component of the bc(1) complex family, Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >cd00680 RHO_alpha_C C-terminal catalytic domain of the oxygenase alpha subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases | Back alignment and domain information |
|---|
| >PRK13474 cytochrome b6-f complex iron-sulfur subunit; Provisional | Back alignment and domain information |
|---|
| >cd08885 RHO_alpha_C_1 C-terminal catalytic domain of the oxygenase alpha subunit of an uncharacterized subgroup of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases | Back alignment and domain information |
|---|
| >cd08883 RHO_alpha_C_CMO-like C-terminal catalytic domain of plant choline monooxygenase (CMO) and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >cd08886 RHO_alpha_C_2 C-terminal catalytic domain of the oxygenase alpha subunit of an uncharacterized subgroup of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases | Back alignment and domain information |
|---|
| >cd08887 RHO_alpha_C_3 C-terminal catalytic domain of the oxygenase alpha subunit of an uncharacterized subgroup of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases | Back alignment and domain information |
|---|
| >TIGR01416 Rieske_proteo ubiquinol-cytochrome c reductase, iron-sulfur subunit | Back alignment and domain information |
|---|
| >cd08884 RHO_alpha_C_GbcA-like C-terminal catalytic domain of GbcA (glycine betaine catabolism A) from Pseudomonas aeruginosa PAO1 and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >PF00848 Ring_hydroxyl_A: Ring hydroxylating alpha subunit (catalytic domain); InterPro: IPR015879 Aromatic ring hydroxylating dioxygenases are multicomponent 1,2-dioxygenase complexes that convert closed-ring structures to non-aromatic cis-diols [] | Back alignment and domain information |
|---|
| >cd03475 Rieske_SoxF_SoxL SoxF and SoxL family, Rieske domain; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer | Back alignment and domain information |
|---|
| >cd08880 RHO_alpha_C_ahdA1c-like C-terminal catalytic domain of the large/alpha subunit (ahdA1c) of a ring-hydroxylating dioxygenase from Sphingomonas sp | Back alignment and domain information |
|---|
| >PF11723 Aromatic_hydrox: Homotrimeric ring hydroxylase; InterPro: IPR021028 This entry represents the catalytic domain from a family of homotrimeric enzymes that hydroxylate aromatic compounds, including 2-oxo-1,2-dihydroquinoline 8-monooxygenase from Pseudomonas putida and carbazole 1,9a-dioxygenase from Janthinobacterium | Back alignment and domain information |
|---|
| >cd08882 RHO_alpha_C_MupW-like C-terminal catalytic domain of Pseudomonas fluorescens MupW and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >COG0723 QcrA Rieske Fe-S protein [Energy production and conversion] | Back alignment and domain information |
|---|
| >cd08881 RHO_alpha_C_NDO-like C-terminal catalytic domain of the oxygenase alpha subunit of naphthalene 1,2-dioxygenase (NDO) and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >KOG1671 consensus Ubiquinol cytochrome c reductase, subunit RIP1 [Energy production and conversion] | Back alignment and domain information |
|---|
| >cd08879 RHO_alpha_C_AntDO-like C-terminal catalytic domain of the oxygenase alpha subunit of Pseudomonas resinovorans strain CA10 anthranilate 1,2-dioxygenase and related aromatic ring hydroxylating dioxygenases | Back alignment and domain information |
|---|
| >TIGR03171 soxL2 Rieske iron-sulfur protein SoxL2 | Back alignment and domain information |
|---|
| >KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 579 | ||||
| 3gke_A | 349 | Crystal Structure Of Dicamba Monooxygenase Length = | 2e-23 | ||
| 1ww9_A | 392 | Crystal Structure Of The Terminal Oxygenase Compone | 3e-12 | ||
| 2zyl_A | 386 | Crystal Structure Of 3-Ketosteroid-9-Alpha-Hydroxyl | 7e-12 | ||
| 3gkq_A | 389 | Terminal Oxygenase Of Carbazole 1,9a-Dioxygenase Fr | 1e-10 | ||
| 3gcf_A | 394 | Terminal Oxygenase Of Carbazole 1,9a-Dioxygenase Fr | 6e-09 | ||
| 1z01_A | 446 | 2-Oxoquinoline 8-Monooxygenase Component: Active Si | 6e-09 | ||
| 3vca_A | 412 | Quaternary Ammonium Oxidative Demethylation: X-Ray | 9e-05 | ||
| 2b1x_A | 470 | Crystal Structure Of Naphthalene 1,2-dioxygenase Fr | 7e-04 |
| >pdb|3GKE|A Chain A, Crystal Structure Of Dicamba Monooxygenase Length = 349 | Back alignment and structure |
|
| >pdb|1WW9|A Chain A, Crystal Structure Of The Terminal Oxygenase Component Of Carbazole 1, 9a-dioxygenase, A Non-heme Iron Oxygenase System Catalyzing The Novel Angular Dioxygenation For Carbazole And Dioxin Length = 392 | Back alignment and structure |
| >pdb|2ZYL|A Chain A, Crystal Structure Of 3-Ketosteroid-9-Alpha-Hydroxylase (Ksha) From M. Tuberculosis Length = 386 | Back alignment and structure |
| >pdb|3GKQ|A Chain A, Terminal Oxygenase Of Carbazole 1,9a-Dioxygenase From Novosphingobium Sp. Ka1 Length = 389 | Back alignment and structure |
| >pdb|3GCF|A Chain A, Terminal Oxygenase Of Carbazole 1,9a-Dioxygenase From Nocardioides Aromaticivorans Ic177 Length = 394 | Back alignment and structure |
| >pdb|1Z01|A Chain A, 2-Oxoquinoline 8-Monooxygenase Component: Active Site Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION Length = 446 | Back alignment and structure |
| >pdb|3VCA|A Chain A, Quaternary Ammonium Oxidative Demethylation: X-Ray Crystallographic, Resonance Raman And Uv-Visible Spectroscopic Analysis Of A Rieske- Type Demethylase Length = 412 | Back alignment and structure |
| >pdb|2B1X|A Chain A, Crystal Structure Of Naphthalene 1,2-dioxygenase From Rhodococcus Sp. Length = 470 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3gke_A DDMC; rieske cluster, non-heme mononuclear iron, oxygenase, oxidoreductase; 1.75A {Stenotrophomonas maltophilia} PDB: 3gb4_A 3gl0_A* 3gl2_A* 3gob_A* 3gte_A 3gts_A* Length = 349 | Back alignment and structure |
|---|
Score = 239 bits (612), Expect = 3e-74
Identities = 74/349 (21%), Positives = 125/349 (35%), Gaps = 30/349 (8%)
Query: 128 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLE 187
WY L +++ + PLG T+ D + LY+ G + D CPHR A LS+G L++G L+
Sbjct: 9 WYVAALPEEL-SEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGILVNGHLQ 67
Query: 188 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 247
C YHG +F+G G+CV P P S VR++ V E ++W+W +P +P
Sbjct: 68 CPYHGLEFDGGGQCVHNPHGN--GARPASLNVRSFPVVERDALIWIWPGDPALADPGAIP 125
Query: 248 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDYSAKREDAQPLGFEVT 307
F P ++ V + ++ +L++NLMD H H A+ + L EV
Sbjct: 126 DFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVHRAN---AQTDAFDRLEREVI 182
Query: 308 ERTDRGFAGQWGREKD--GSMPNFL-------------RFEAPCVLQNNRESVDNKTG-- 350
A M FL R+ + N T
Sbjct: 183 VGDGEIQALMKIPGGTPSVLMAKFLRGANTPVDAWNDIRWNKVSAMLNFIAVAPEGTPKE 242
Query: 351 EKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVFEQDMGFLSSQ 410
+ +S G + P + A + ++D + +
Sbjct: 243 QSIHSRGTHILTPETEASCHYFFGSSRN-FGIDDPEMDGVLRSWQAQALVKEDKVVVEAI 301
Query: 411 NEVLLKEKVPTKELYFNLRSIDTWVAEYRKWMDKA----GHGMPYYFGH 455
V + + S D + ++K + ++ H
Sbjct: 302 ERRRA--YVEANGIRPAMLSCDEAAVRVSREIEKLEQLEAARLEHHHHH 348
|
| >2zyl_A Possible oxidoreductase; KSHA, cholesterol, rieske; 2.30A {Mycobacterium tuberculosis} Length = 386 | Back alignment and structure |
|---|
| >3gkq_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske nonheme iron oxygenase, electron transfer, putidaredoxin-type ferredoxin; 2.10A {Sphingomonas} Length = 389 | Back alignment and structure |
|---|
| >2de6_A Terminal oxygenase component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Janthinobacterium} SCOP: b.33.1.2 d.129.3.3 PDB: 1ww9_A 2de5_A 2de7_A* Length = 392 | Back alignment and structure |
|---|
| >3gcf_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske oxygenase, 2Fe-2S, electron transfer, oxidoreductase; 2.30A {Nocardioides aromaticivorans} Length = 394 | Back alignment and structure |
|---|
| >1z01_A 2-OXO-1,2-dihydroquinoline 8-monooxygenase, oxygenase component; rieske center, oxygen binding/activation, substrate bound complex; 1.80A {Pseudomonas putida} SCOP: b.33.1.2 d.129.3.3 PDB: 1z02_A 1z03_A* Length = 446 | Back alignment and structure |
|---|
| >2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida} Length = 103 | Back alignment and structure |
|---|
| >1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A Length = 111 | Back alignment and structure |
|---|
| >3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein ST initiative, PSI; 2.07A {Mus musculus} Length = 157 | Back alignment and structure |
|---|
| >2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D* Length = 115 | Back alignment and structure |
|---|
| >3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} Length = 106 | Back alignment and structure |
|---|
| >2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae} Length = 108 | Back alignment and structure |
|---|
| >3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans} Length = 121 | Back alignment and structure |
|---|
| >1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B* Length = 112 | Back alignment and structure |
|---|
| >3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3 Length = 119 | Back alignment and structure |
|---|
| >2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3 Length = 113 | Back alignment and structure |
|---|
| >3n0q_A Putative aromatic-ring hydroxylating dioxygenase; rieske [2Fe-2S] domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} Length = 409 | Back alignment and structure |
|---|
| >3vca_A Ring-hydroxylating dioxygenase; rieske-type, mononuclear non-heme iron, N-demethylase, oxido; 1.59A {Sinorhizobium meliloti} PDB: 3vcp_A Length = 412 | Back alignment and structure |
|---|
| >2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3 Length = 130 | Back alignment and structure |
|---|
| >2bmo_A Oxygenase-alpha NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2bmq_A 2bmr_A* 2hmj_A 2hml_A* 2hmn_A* 1o7n_A 1ndo_A 1o7g_A* 1o7h_A 1o7m_A 1eg9_A 1o7p_A* 1o7w_A 1uuv_A 1uuw_A 2hmk_A* 2hmm_A* 2hmo_A* Length = 447 | Back alignment and structure |
|---|
| >2b1x_A Naphthalene dioxygenase large subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2b24_A Length = 470 | Back alignment and structure |
|---|
| >2gbw_A Biphenyl 2,3-dioxygenase alpha subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_A* 2ckf_A Length = 454 | Back alignment and structure |
|---|
| >3gzx_A Biphenyl dioxygenase subunit alpha; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} PDB: 3gzy_A* 1wql_A 2xso_A 2xsh_A 2xrx_A* 2xr8_A* 2yfi_A 2yfj_A* Length = 457 | Back alignment and structure |
|---|
| >1uli_A Biphenyl dioxygenase large subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 1ulj_A* 3en1_A* 3eqq_A Length = 460 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 579 | |||
| 3gke_A | 349 | DDMC; rieske cluster, non-heme mononuclear iron, o | 100.0 | |
| 2zyl_A | 386 | Possible oxidoreductase; KSHA, cholesterol, rieske | 100.0 | |
| 1z01_A | 446 | 2-OXO-1,2-dihydroquinoline 8-monooxygenase, oxygen | 100.0 | |
| 3n0q_A | 409 | Putative aromatic-ring hydroxylating dioxygenase; | 100.0 | |
| 3vca_A | 412 | Ring-hydroxylating dioxygenase; rieske-type, monon | 100.0 | |
| 2de6_A | 392 | Terminal oxygenase component of carbazole; electro | 100.0 | |
| 3gkq_A | 389 | Terminal oxygenase component of carbazole 1,9A- di | 100.0 | |
| 3gcf_A | 394 | Terminal oxygenase component of carbazole 1,9A- di | 100.0 | |
| 2b1x_A | 470 | Naphthalene dioxygenase large subunit; rieske non- | 100.0 | |
| 2gbw_A | 454 | Biphenyl 2,3-dioxygenase alpha subunit; rieske oxy | 100.0 | |
| 2bmo_A | 447 | Oxygenase-alpha NBDO; nitrobenzene dioxygenase, ni | 100.0 | |
| 3gzx_A | 457 | Biphenyl dioxygenase subunit alpha; rieskie, non-h | 100.0 | |
| 1uli_A | 460 | Biphenyl dioxygenase large subunit; alpha3 BETA3 h | 100.0 | |
| 2qpz_A | 103 | Naphthalene 1,2-dioxygenase system ferredoxin subu | 99.94 | |
| 1vm9_A | 111 | Toluene-4-monooxygenase system protein C; structur | 99.93 | |
| 2i7f_A | 108 | Ferredoxin component of dioxygenase; rieske ferred | 99.93 | |
| 1fqt_A | 112 | Rieske-type ferredoxin of biphenyl dioxygenase; 2F | 99.93 | |
| 2de6_D | 115 | Ferredoxin component of carbazole; electron transf | 99.93 | |
| 3dqy_A | 106 | Toluene 1,2-dioxygenase system ferredoxin subunit; | 99.93 | |
| 2jza_A | 130 | Nitrite reductase [NAD(P)H] small subunit; ISP dom | 99.93 | |
| 3c0d_A | 119 | Putative nitrite reductase NADPH (small subunit) o | 99.92 | |
| 3gce_A | 121 | Ferredoxin component of carbazole 1,9A- dioxygenas | 99.92 | |
| 2jo6_A | 113 | Nitrite reductase [NAD(P)H] small subunit; all bet | 99.92 | |
| 3d89_A | 157 | Rieske domain-containing protein; CAsp target, rie | 99.92 | |
| 4aiv_A | 119 | Probable nitrite reductase [NAD(P)H] small subuni; | 99.92 | |
| 4aay_B | 175 | AROB; oxidoreductase, rieske, iron sulfur, molybdo | 99.85 | |
| 1rfs_A | 139 | Rieske protein; iron-sulfur protein, electron tran | 99.83 | |
| 1rie_A | 129 | Rieske iron-sulfur protein; oxidoreductase, cytoch | 99.83 | |
| 1g8k_B | 133 | Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, | 99.81 | |
| 3azc_A | 133 | Cytochrome B6-F complex iron-sulfur subunit; riesk | 99.64 | |
| 1pp9_E | 196 | Ubiquinol-cytochrome C reductase iron-sulfur SUBU | 99.7 | |
| 2qjy_C | 187 | Ubiquinol-cytochrome C reductase iron-sulfur SUBU; | 99.7 | |
| 1nyk_A | 165 | Rieske iron-sulfur protein; beta barrel, iron sulf | 99.7 | |
| 3cx5_E | 185 | Cytochrome B-C1 complex subunit rieske, mitochondr | 99.69 | |
| 2nwf_A | 141 | Ubiquinol-cytochrome C reductase iron-sulfur SUBU; | 99.69 | |
| 1vf5_D | 179 | Rieske iron-sulfur protein; photosynthesis, membra | 99.65 | |
| 1jm1_A | 204 | Rieske iron-sulfur protein SOXF; electron transpor | 99.54 |
| >3gke_A DDMC; rieske cluster, non-heme mononuclear iron, oxygenase, oxidoreductase; 1.75A {Stenotrophomonas maltophilia} PDB: 3gb4_A 3gl0_A* 3gl2_A* 3gob_A* 3gte_A 3gts_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-52 Score=437.15 Aligned_cols=313 Identities=22% Similarity=0.350 Sum_probs=239.8
Q ss_pred cccCCeEEeeecCCCCCCCcEEEEEcCEEEEEEEeCCCeEEeecCCCCCCCCcccCCccccceEEccCcceEEcCCCcee
Q 037348 123 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 202 (579)
Q Consensus 123 ~~~~~W~~v~~~~dl~~~~~~~~~l~g~~lvl~R~~~G~~~a~~d~CpHrgapLs~G~v~~g~l~CpyHGW~Fd~dG~c~ 202 (579)
.+++.||+||.++|| +|+++.++++|++|+|||+.+|+++|+.|+|||||++|+.|+++++.|+||||||+||.||+|+
T Consensus 4 ~~~~~W~~v~~~~el-~g~~~~~~~~g~~vvv~R~~~G~v~a~~n~CpHrg~~L~~G~~~~~~i~CpyHgw~fd~~G~~~ 82 (349)
T 3gke_A 4 FVRNAWYVAALPEEL-SEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGILVNGHLQCPYHGLEFDGGGQCV 82 (349)
T ss_dssp CCCSSCEEEECGGGC-CSSCEEEEETTEEEEEEECTTSCEEEEESSCTTTCCCGGGCEEETTEEECTTTCCEECTTCCEE
T ss_pred ccccccEEEEEHHHC-CCCeEEEEECCEEEEEEEcCCCcEEEEeCcCCCCCcCCccCCccceEEEECCCCCEEcCCCCcc
Confidence 467999999999999 8899999999999999999899999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCccCccceEEEEEecCeEEEEcCCCCCCCCCCCCccccccCCCceeeeEEEEeccChHhHhhcCCCCCC
Q 037348 203 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 282 (579)
Q Consensus 203 ~iP~~~~~~~~~~~~~l~~ypv~~~~G~V~V~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~~~~~~~~~lvEN~lD~~H 282 (579)
.+|+. ...++...++++|||++++|+||||+++++.++...+|.++++++++|.......+++|||++++||++|+||
T Consensus 83 ~~P~~--~~~~~~~~~l~~~~v~~~~G~V~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~nwk~~~EN~~D~~H 160 (349)
T 3gke_A 83 HNPHG--NGARPASLNVRSFPVVERDALIWIWPGDPALADPGAIPDFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGH 160 (349)
T ss_dssp ECCST--TCCCCGGGCCCBCCEEEETTEEEECCSCGGGCCGGGSCCCGGGGCTTSEEEEEEEEESSCHHHHHHHHHCGGG
T ss_pred ccCcc--ccccccccccceeeEEEECCEEEEeeCCCCCCcccccCCccccCCCCCEEEeEEEEEecCHHhHHHhcccccc
Confidence 99962 2345667889999999999999999998764544557878777777887666677899999999999999999
Q ss_pred CcccccccccccccccCCCceEEEeecccCCcccc-----------cC---C--CCCCCCceEEEEecCeeeeeeceeec
Q 037348 283 IPISHDRTDYSAKREDAQPLGFEVTERTDRGFAGQ-----------WG---R--EKDGSMPNFLRFEAPCVLQNNRESVD 346 (579)
Q Consensus 283 ~pfvH~~~~~~~~r~~~~p~~~~v~~~~~~Gf~~~-----------~~---~--~~~~~~~~~~~F~~P~~~~~~~~~~~ 346 (579)
++|+|+++++... .. ....+++. +..++... +. . +...+.+..++|.+||++...+.+..
T Consensus 161 ~~~~H~~~~~~~~--~~-~~~~~v~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~P~~~~~~~~~~~ 236 (349)
T 3gke_A 161 AQYVHRANAQTDA--FD-RLEREVIV-GDGEIQALMKIPGGTPSVLMAKFLRGANTPVDAWNDIRWNKVSAMLNFIAVAP 236 (349)
T ss_dssp HHHHTHHHHCCTT--GG-GCEEEEEE-CSSEEEEEEEEEEECCCHHHHHHTTTCCSCEEEEEEEEEETTTEEEEEEEEEE
T ss_pred chhccchhhcCcc--cc-CCCCEEEE-cCCEEEEEEEecCCCCChHHHhhcccCCCCceeEEEEEEECCEEEEEEEeccc
Confidence 9999999875332 21 12234332 22222110 10 0 11122346799999999877665432
Q ss_pred CC--CCCeeeEEEEEEeeeCCCCeEEEEEEEecCCCCCccccCchhHhhHhhhhHH-HHHHHHHHHHHHhhhhcCCCCcc
Q 037348 347 NK--TGEKHYSTGLFLCRPTGQGKSMLIVRFGTTGTSPWIKLFPDWYFHQSASKVF-EQDMGFLSSQNEVLLKEKVPTKE 423 (579)
Q Consensus 347 ~~--~G~~~~~~~v~~~~Pv~pg~trli~~f~~~~~~~~~k~~p~W~~h~~~~~Vl-deD~~iLe~Qq~~l~~~~~~~k~ 423 (579)
.+ ......+..+++|+|+++++|++++.+.+++......+.+.| ..++++|| +||+.|||.||+++...+. ...
T Consensus 237 ~g~p~~~~~~~~~~~~~tP~s~~~tr~~~~~~rn~~~~d~~~~~~~--~~~~~~if~~ED~~ile~Qq~~l~~~~~-~~~ 313 (349)
T 3gke_A 237 EGTPKEQSIHSRGTHILTPETEASCHYFFGSSRNFGIDDPEMDGVL--RSWQAQALVKEDKVVVEAIERRRAYVEA-NGI 313 (349)
T ss_dssp TTSCGGGSEEEEEEEEEEEEETTEEEEEEEEEESSSTTCHHHHHHH--HHHHHHHTTTHHHHHHHHHHHTHHHHHH-TTC
T ss_pred CCCCCCCceEEEEEEEEecCCCCeEEEEEEEEecCccCchhhhHHH--HHHHhhhhhhhhHHHHHHHHHHhhcCCc-ccc
Confidence 11 111233556788999999999999999998865433333333 34678898 9999999999999876421 112
Q ss_pred ccccccccCHHHHHHHHHHHHhC
Q 037348 424 LYFNLRSIDTWVAEYRKWMDKAG 446 (579)
Q Consensus 424 ~y~~~~~sD~~VvafRrWL~k~g 446 (579)
.++ +..+|+++++|||||+++.
T Consensus 314 ~~~-~~~~D~~~v~~Rr~l~~l~ 335 (349)
T 3gke_A 314 RPA-MLSCDEAAVRVSREIEKLE 335 (349)
T ss_dssp CCC-CCGGGHHHHHHHHHHHHHH
T ss_pred ccc-cccccHHHHHHHHHHHHHH
Confidence 223 4568999999999999874
|
| >2zyl_A Possible oxidoreductase; KSHA, cholesterol, rieske; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1z01_A 2-OXO-1,2-dihydroquinoline 8-monooxygenase, oxygenase component; rieske center, oxygen binding/activation, substrate bound complex; 1.80A {Pseudomonas putida} SCOP: b.33.1.2 d.129.3.3 PDB: 1z02_A 1z03_A* | Back alignment and structure |
|---|
| >3n0q_A Putative aromatic-ring hydroxylating dioxygenase; rieske [2Fe-2S] domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} | Back alignment and structure |
|---|
| >3vca_A Ring-hydroxylating dioxygenase; rieske-type, mononuclear non-heme iron, N-demethylase, oxido; 1.59A {Sinorhizobium meliloti} PDB: 3vcp_A | Back alignment and structure |
|---|
| >2de6_A Terminal oxygenase component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Janthinobacterium} SCOP: b.33.1.2 d.129.3.3 PDB: 1ww9_A 2de5_A 2de7_A* | Back alignment and structure |
|---|
| >3gkq_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske nonheme iron oxygenase, electron transfer, putidaredoxin-type ferredoxin; 2.10A {Sphingomonas} | Back alignment and structure |
|---|
| >3gcf_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske oxygenase, 2Fe-2S, electron transfer, oxidoreductase; 2.30A {Nocardioides aromaticivorans} | Back alignment and structure |
|---|
| >2b1x_A Naphthalene dioxygenase large subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2b24_A | Back alignment and structure |
|---|
| >2gbw_A Biphenyl 2,3-dioxygenase alpha subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_A* 2ckf_A | Back alignment and structure |
|---|
| >2bmo_A Oxygenase-alpha NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: b.33.1.2 d.129.3.3 PDB: 2bmq_A 2bmr_A* 2hmj_A 2hml_A* 2hmn_A* 1o7n_A 1ndo_A 1o7g_A* 1o7h_A 1o7m_A 1eg9_A 1o7p_A* 1o7w_A 1uuv_A 1uuw_A 2hmk_A* 2hmm_A* 2hmo_A* | Back alignment and structure |
|---|
| >3gzx_A Biphenyl dioxygenase subunit alpha; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} PDB: 3gzy_A* 1wql_A 2xso_A 2xsh_A 2xrx_A* 2xr8_A* 2yfi_A 2yfj_A* 2yfl_A* | Back alignment and structure |
|---|
| >1uli_A Biphenyl dioxygenase large subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: b.33.1.2 d.129.3.3 PDB: 1ulj_A* 3en1_A* 3eqq_A | Back alignment and structure |
|---|
| >2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida} | Back alignment and structure |
|---|
| >1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A | Back alignment and structure |
|---|
| >2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae} | Back alignment and structure |
|---|
| >1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B* | Back alignment and structure |
|---|
| >2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D* | Back alignment and structure |
|---|
| >3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B* | Back alignment and structure |
|---|
| >2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3 | Back alignment and structure |
|---|
| >3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3 | Back alignment and structure |
|---|
| >3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans} | Back alignment and structure |
|---|
| >2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3 | Back alignment and structure |
|---|
| >3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein ST initiative, PSI; 2.07A {Mus musculus} | Back alignment and structure |
|---|
| >4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species} | Back alignment and structure |
|---|
| >1rfs_A Rieske protein; iron-sulfur protein, electron transport; 1.83A {Spinacia oleracea} SCOP: b.33.1.1 PDB: 1q90_C* | Back alignment and structure |
|---|
| >1rie_A Rieske iron-sulfur protein; oxidoreductase, cytochrome BC1 complex, histidine ligands, rieske iron-sulfur cluster, electron transport; 1.50A {Bos taurus} SCOP: b.33.1.1 | Back alignment and structure |
|---|
| >1g8k_B Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, [2Fe-2S] rieske, oxidoreductase; HET: MGD; 1.64A {Alcaligenes faecalis} SCOP: b.33.1.1 PDB: 1g8j_B* | Back alignment and structure |
|---|
| >3azc_A Cytochrome B6-F complex iron-sulfur subunit; rieske, thermosynechococcus elongatu photosynthesis, electron transport; 2.00A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
| >1pp9_E Ubiquinol-cytochrome C reductase iron-sulfur SUBU mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: b.33.1.1 f.23.12.1 PDB: 1bgy_E* 1be3_E* 1l0n_E* 1ntk_E* 1ntm_E* 1ntz_E* 1nu1_E* 1l0l_E* 1ppj_E* 1qcr_E* 1sqb_E* 1sqp_E* 1sqq_E* 1sqv_E* 1sqx_E* 2a06_E* 2fyu_E* 2ybb_E* 1bcc_E* 2bcc_E* ... | Back alignment and structure |
|---|
| >2qjy_C Ubiquinol-cytochrome C reductase iron-sulfur SUBU; cytochrome B, 8 TM helixces cytochrome C1, 1 C-TERM TM helix 1 N-TERM TM helix; HET: BGL HEM SMA LOP UQ2; 2.40A {Rhodobacter sphaeroides} PDB: 2fyn_C* 2qjk_C* 2qjp_C* 1zrt_E* 2yiu_C* | Back alignment and structure |
|---|
| >1nyk_A Rieske iron-sulfur protein; beta barrel, iron sulfur cluster, electron transport; 1.31A {Thermus thermophilus} SCOP: b.33.1.1 PDB: 3fou_A | Back alignment and structure |
|---|
| >3cx5_E Cytochrome B-C1 complex subunit rieske, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: b.33.1.1 f.23.12.1 PDB: 1kb9_E* 1kyo_E* 1p84_E* 2ibz_E* 1ezv_E* 3cxh_E* | Back alignment and structure |
|---|
| >2nwf_A Ubiquinol-cytochrome C reductase iron-sulfur SUBU; rieske [2Fe-2S] ISP, oxidoreductase; HET: GOL; 1.10A {Rhodobacter sphaeroides} PDB: 2nuk_A 2nve_A 2num_A 2nvg_A 2nvf_A | Back alignment and structure |
|---|
| >1vf5_D Rieske iron-sulfur protein; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: b.33.1.1 f.23.12.1 PDB: 2d2c_D* 2e74_D* 2e75_D* 2e76_D* 2zt9_D* | Back alignment and structure |
|---|
| >1jm1_A Rieske iron-sulfur protein SOXF; electron transport, respiratory chain, oxidoreductase; 1.11A {Sulfolobus acidocaldarius} SCOP: b.33.1.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 579 | ||||
| d1z01a1 | 148 | b.33.1.2 (A:16-163) 2-oxo-1,2-dihydroquinoline 8-m | 5e-27 | |
| d2de6a1 | 142 | b.33.1.2 (A:1-142) Terminal oxygenase component of | 2e-23 | |
| d1fqta_ | 109 | b.33.1.1 (A:) Rieske-type ferredoxin associated wi | 3e-16 | |
| d1rfsa_ | 127 | b.33.1.1 (A:) ISP subunit from chloroplast cytochr | 7e-16 | |
| d1vm9a_ | 109 | b.33.1.1 (A:) Toluene-4-monooxygenase system prote | 2e-15 | |
| d2e74d1 | 134 | b.33.1.1 (D:46-179) ISP subunit from the cytochrom | 2e-13 | |
| d2jo6a1 | 108 | b.33.1.3 (A:1-108) NADH-nitrite reductase small su | 7e-13 | |
| d2jzaa1 | 122 | b.33.1.3 (A:1-122) NADH-nitrite reductase small su | 8e-13 | |
| d3c0da1 | 108 | b.33.1.3 (A:4-111) NADH-nitrite reductase small su | 3e-11 | |
| d1g8kb_ | 133 | b.33.1.1 (B:) Arsenite oxidase Rieske subunit {Alc | 7e-08 | |
| d1nyka_ | 156 | b.33.1.1 (A:) Soluble Rieske protein {Thermus ther | 3e-06 | |
| d2bmoa1 | 150 | b.33.1.2 (A:3-152) Nitrobenzene dioxygenase alpha | 4e-06 | |
| d1ulia1 | 154 | b.33.1.2 (A:17-170) Biphenyl dioxygenase large sub | 1e-05 | |
| d2b1xa1 | 162 | b.33.1.2 (A:1-162) Naphthalene 1,2-dioxygenase alp | 3e-05 | |
| d1z01a2 | 279 | d.129.3.3 (A:164-442) 2-oxo-1,2-dihydroquinoline 8 | 3e-04 |
| >d1z01a1 b.33.1.2 (A:16-163) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]} Length = 148 | Back information, alignment and structure |
|---|
class: All beta proteins fold: ISP domain superfamily: ISP domain family: Ring hydroxylating alpha subunit ISP domain domain: 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO species: Pseudomonas putida [TaxId: 303]
Score = 104 bits (260), Expect = 5e-27
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 120 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSEG 179
A + + WYP T ++ +D G+ + IVL + G++ +D+C HR +LSE
Sbjct: 21 AAWGFINHWYPALFTHELEEDQVQGIQICGVPIVLRRV-NGKVFALKDQCLHRGVRLSEK 79
Query: 180 QLI--DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 237
+ C YHG+ F+ E + + K+ + V TY V E G+++V++ +
Sbjct: 80 PTCFTKSTISCWYHGFTFDLETGKLVTIVANPEDKLIGTTGVTTYPVHEVNGMIFVFVRE 139
Query: 238 KTPPNPD 244
P+ D
Sbjct: 140 DDFPDED 146
|
| >d2de6a1 b.33.1.2 (A:1-142) Terminal oxygenase component of carbazole CarAa {Janthinobacterium sp. j3 [TaxId: 213804]} Length = 142 | Back information, alignment and structure |
|---|
| >d1fqta_ b.33.1.1 (A:) Rieske-type ferredoxin associated with biphenyl dioxygenase {Burkholderia cepacia [TaxId: 292]} Length = 109 | Back information, alignment and structure |
|---|
| >d1rfsa_ b.33.1.1 (A:) ISP subunit from chloroplast cytochrome bf complex {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 127 | Back information, alignment and structure |
|---|
| >d1vm9a_ b.33.1.1 (A:) Toluene-4-monooxygenase system protein C, TmoC {Pseudomonas mendocina [TaxId: 300]} Length = 109 | Back information, alignment and structure |
|---|
| >d2e74d1 b.33.1.1 (D:46-179) ISP subunit from the cytochrome b6f complex, soluble domain {Mastigocladus laminosus [TaxId: 83541]} Length = 134 | Back information, alignment and structure |
|---|
| >d2jo6a1 b.33.1.3 (A:1-108) NADH-nitrite reductase small subunit NirD {Escherichia coli [TaxId: 562]} Length = 108 | Back information, alignment and structure |
|---|
| >d2jzaa1 b.33.1.3 (A:1-122) NADH-nitrite reductase small subunit NirD {Erwinia carotovora [TaxId: 554]} Length = 122 | Back information, alignment and structure |
|---|
| >d3c0da1 b.33.1.3 (A:4-111) NADH-nitrite reductase small subunit NirD {Vibrio parahaemolyticus [TaxId: 670]} Length = 108 | Back information, alignment and structure |
|---|
| >d1g8kb_ b.33.1.1 (B:) Arsenite oxidase Rieske subunit {Alcaligenes faecalis [TaxId: 511]} Length = 133 | Back information, alignment and structure |
|---|
| >d1nyka_ b.33.1.1 (A:) Soluble Rieske protein {Thermus thermophilus [TaxId: 274]} Length = 156 | Back information, alignment and structure |
|---|
| >d2bmoa1 b.33.1.2 (A:3-152) Nitrobenzene dioxygenase alpha subunit, NBDO-alpha {Comamonas sp. JS765 [TaxId: 58226]} Length = 150 | Back information, alignment and structure |
|---|
| >d1ulia1 b.33.1.2 (A:17-170) Biphenyl dioxygenase large subunit BphA1, N-terminal domain {Rhodococcus sp. (strain RHA1) [TaxId: 101510]} Length = 154 | Back information, alignment and structure |
|---|
| >d2b1xa1 b.33.1.2 (A:1-162) Naphthalene 1,2-dioxygenase alpha subunit, N-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]} Length = 162 | Back information, alignment and structure |
|---|
| >d1z01a2 d.129.3.3 (A:164-442) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]} Length = 279 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 579 | |||
| d1ulia1 | 154 | Biphenyl dioxygenase large subunit BphA1, N-termin | 99.97 | |
| d2b1xa1 | 162 | Naphthalene 1,2-dioxygenase alpha subunit, N-domai | 99.97 | |
| d2de6a1 | 142 | Terminal oxygenase component of carbazole CarAa {J | 99.96 | |
| d2bmoa1 | 150 | Nitrobenzene dioxygenase alpha subunit, NBDO-alpha | 99.96 | |
| d1z01a1 | 148 | 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygen | 99.96 | |
| d2jzaa1 | 122 | NADH-nitrite reductase small subunit NirD {Erwinia | 99.92 | |
| d1vm9a_ | 109 | Toluene-4-monooxygenase system protein C, TmoC {Ps | 99.91 | |
| d2jo6a1 | 108 | NADH-nitrite reductase small subunit NirD {Escheri | 99.9 | |
| d1fqta_ | 109 | Rieske-type ferredoxin associated with biphenyl di | 99.89 | |
| d3c0da1 | 108 | NADH-nitrite reductase small subunit NirD {Vibrio | 99.88 | |
| d1rfsa_ | 127 | ISP subunit from chloroplast cytochrome bf complex | 99.73 | |
| d2e74d1 | 134 | ISP subunit from the cytochrome b6f complex, solub | 99.68 | |
| d1g8kb_ | 133 | Arsenite oxidase Rieske subunit {Alcaligenes faeca | 99.66 | |
| d1z01a2 | 279 | 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygen | 99.55 | |
| d1nyka_ | 156 | Soluble Rieske protein {Thermus thermophilus [TaxI | 99.49 | |
| d3cx5e1 | 129 | ISP subunit of the mitochondrial cytochrome bc1-co | 99.13 | |
| d1riea_ | 127 | ISP subunit of the mitochondrial cytochrome bc1-co | 99.01 | |
| d1jm1a_ | 202 | Rieske protein II (SoxF) {Archaeon Sulfolobus acid | 98.77 | |
| d2de6a2 | 242 | Terminal oxygenase component of carbazole CarAa {J | 98.21 | |
| d2b1xa2 | 279 | Naphthalene 1,2-dioxygenase alpha subunit, C-domai | 97.53 | |
| d2bmoa2 | 287 | Nitrobenzene dioxygenase alpha subunit, NBDO-alpha | 97.27 | |
| d1ulia2 | 281 | Biphenyl dioxygenase large subunit BphA1, C-termin | 96.71 | |
| d1wqla2 | 279 | Large subunit of cumene dioxygenase cumA1 {Pseudom | 95.9 |
| >d1ulia1 b.33.1.2 (A:17-170) Biphenyl dioxygenase large subunit BphA1, N-terminal domain {Rhodococcus sp. (strain RHA1) [TaxId: 101510]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: ISP domain superfamily: ISP domain family: Ring hydroxylating alpha subunit ISP domain domain: Biphenyl dioxygenase large subunit BphA1, N-terminal domain species: Rhodococcus sp. (strain RHA1) [TaxId: 101510]
Probab=99.97 E-value=1.3e-32 Score=255.27 Aligned_cols=139 Identities=14% Similarity=0.300 Sum_probs=122.9
Q ss_pred CCCcccCCCCccChhhhcccccccccCCeEEeeecCCCCC-CCcEEEEEcCEEEEEEEeCCCeEEeecCCCCCCCCcccC
Q 037348 100 DHKVLVGPASEEESRGERRVADYDWTEEWYPLYLTKDVPD-DAPLGLTVFDQQIVLYKDGKGELRCHQDRCPHRLAKLSE 178 (579)
Q Consensus 100 d~~~~~p~~~y~~~~~~~~e~~~~~~~~W~~v~~~~dl~~-~~~~~~~l~g~~lvl~R~~~G~~~a~~d~CpHrgapLs~ 178 (579)
.+...+|.+.|+|+++++.|.+.+|.+.|++||+++||++ |..++++++|++|+|+|+++|+++||.|+|||||++|++
T Consensus 12 ~~~~~l~~~~Y~~~~~~~~E~~~if~~~W~~v~~~~el~~~g~~~~~~i~~~~ilv~R~~~g~i~af~N~C~HRG~~L~~ 91 (154)
T d1ulia1 12 ERTGRLDPRIYTDEALYEQELERIFGRSWLLMGHETQIPKAGDFMTNYMGEDPVMVVRQKNGEIRVFLNQCRHRGMRICR 91 (154)
T ss_dssp TTTTEECGGGGTCHHHHHHHHHHTTTTSCEEEEEGGGSCSTTEEEEEEETTEEEEEEECTTSCEEEEESCCTTTCCCSCC
T ss_pred hhcCcCCHHHcCCHHHHHHHHHHHhccCCEEEEEhhhCCCCcceeeeecCCcceeEEeecccceeeeecccccCCceeee
Confidence 3455699999999999999999999999999999999976 568889999999999999999999999999999999998
Q ss_pred Ccc-ccceEEccCcceEEcCCCceeecCCCCCC-CCCC-ccCccceEEEEEecCeEEEEcCCC
Q 037348 179 GQL-IDGRLECLYHGWQFEGEGKCVKIPQLPAD-AKIP-RSACVRTYEVKESQGVVWVWMSQK 238 (579)
Q Consensus 179 G~v-~~g~l~CpyHGW~Fd~dG~c~~iP~~~~~-~~~~-~~~~l~~ypv~~~~G~V~V~~~~~ 238 (579)
|.. .++.|+||||||+||.+|+|+.+|..+.. ..++ ++.+|..++|++++|+||||++++
T Consensus 92 ~~~g~~~~l~CpYHgW~f~~~G~~~~iP~~~~~~~~~~~~~~~L~~~~v~~~~G~Ifv~~d~D 154 (154)
T d1ulia1 92 ADGGNAKSFTCSYHGWAYDTGGNLVSVPFEEQAFPGLRKEDWGPLQARVETYKGLIFANWDAD 154 (154)
T ss_dssp SSEEECSCEECTTTCCEECTTCCEEECTTHHHHCTTCCGGGSSCCEEEEEEETTEEEEECCTT
T ss_pred cCCCccceEEeeeceeEEecCCccccCCcccccCCCCChHHCCCeEEeEEEECCEEEEEeCCC
Confidence 764 67889999999999999999999975432 2232 356799999999999999999753
|
| >d2b1xa1 b.33.1.2 (A:1-162) Naphthalene 1,2-dioxygenase alpha subunit, N-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]} | Back information, alignment and structure |
|---|
| >d2de6a1 b.33.1.2 (A:1-142) Terminal oxygenase component of carbazole CarAa {Janthinobacterium sp. j3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
| >d2bmoa1 b.33.1.2 (A:3-152) Nitrobenzene dioxygenase alpha subunit, NBDO-alpha {Comamonas sp. JS765 [TaxId: 58226]} | Back information, alignment and structure |
|---|
| >d1z01a1 b.33.1.2 (A:16-163) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d2jzaa1 b.33.1.3 (A:1-122) NADH-nitrite reductase small subunit NirD {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
| >d1vm9a_ b.33.1.1 (A:) Toluene-4-monooxygenase system protein C, TmoC {Pseudomonas mendocina [TaxId: 300]} | Back information, alignment and structure |
|---|
| >d2jo6a1 b.33.1.3 (A:1-108) NADH-nitrite reductase small subunit NirD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1fqta_ b.33.1.1 (A:) Rieske-type ferredoxin associated with biphenyl dioxygenase {Burkholderia cepacia [TaxId: 292]} | Back information, alignment and structure |
|---|
| >d3c0da1 b.33.1.3 (A:4-111) NADH-nitrite reductase small subunit NirD {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
| >d1rfsa_ b.33.1.1 (A:) ISP subunit from chloroplast cytochrome bf complex {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
| >d2e74d1 b.33.1.1 (D:46-179) ISP subunit from the cytochrome b6f complex, soluble domain {Mastigocladus laminosus [TaxId: 83541]} | Back information, alignment and structure |
|---|
| >d1g8kb_ b.33.1.1 (B:) Arsenite oxidase Rieske subunit {Alcaligenes faecalis [TaxId: 511]} | Back information, alignment and structure |
|---|
| >d1z01a2 d.129.3.3 (A:164-442) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1nyka_ b.33.1.1 (A:) Soluble Rieske protein {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d3cx5e1 b.33.1.1 (E:87-215) ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1riea_ b.33.1.1 (A:) ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1jm1a_ b.33.1.1 (A:) Rieske protein II (SoxF) {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d2de6a2 d.129.3.3 (A:143-384) Terminal oxygenase component of carbazole CarAa {Janthinobacterium sp. j3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
| >d2b1xa2 d.129.3.3 (A:163-441) Naphthalene 1,2-dioxygenase alpha subunit, C-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]} | Back information, alignment and structure |
|---|
| >d2bmoa2 d.129.3.3 (A:153-439) Nitrobenzene dioxygenase alpha subunit, NBDO-alpha {Comamonas sp. JS765 [TaxId: 58226]} | Back information, alignment and structure |
|---|
| >d1ulia2 d.129.3.3 (A:171-451) Biphenyl dioxygenase large subunit BphA1, C-terminal domain {Rhodococcus sp. (strain RHA1) [TaxId: 101510]} | Back information, alignment and structure |
|---|
| >d1wqla2 d.129.3.3 (A:181-459) Large subunit of cumene dioxygenase cumA1 {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|