Citrus Sinensis ID: 037368

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820---

MYQWRKFDFFEEKYGGKSTIPEEVSGNITCCSSGRGKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVKEVSHMLCEWGNIILVMTDKSVLCIGEKDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLEDLGRYDEALQYISSLDPSQAGVTVKEYGKILIEHKPMETIDILLRLCTEDGESTKRGASSSTYMSMLPSPVDFLNIFVHHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSYDLNFPSISQLNDGVDLRLRSGSGLPKAEYNGEVTADGKDTYKGKDVLERREKGLRLLKTAWPSELEHPLYDVDLAIILCEMNAFKEGLLYLYEKLKLYKEVIACYTQAHDHEGLIACCKRLGDSGKGGDPSLWVDLLKYFGELGEDCSKEVKEVLTYIERDDILPPIVVLQTLSRNPCLTLSVIKDYIARKLEQESKLIEGDRRAIENYQ

cccccEEccccccccccccccccccccEEEEEccccEEEEEEcccEEEEEcccccEEEEEEECcccEEEEEEEccccEEEEEEccccccccccccEEEEEEcccccccccccccccEEEEEEEcccccccccccEEEEEEEcccccEEEEEEccEEEEEEEcccccccccEEEEEEcccccccEEEEEEccccEEEEEEcccEEEEEEECccccccCEEcccccccccccccccccEEEECccEEEEECccccccccccccccEEEEEEccEEEEEEEcccccccEEEEEEccccEEEEEEEcccEEEEEEEcccEEEEEcccEEEEEEEccHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHccccccccccccHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHcccccHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccccHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc

MYQWRKFDFFEEKYGGKSTIPEEVSGNITCCSSGRGKVVIGCDDGAVSLLDRGLKFNFGFQAHSSSVLFLQQLKQRNFLVTVGEDEQVSAQQSAVCLKVFDLDKMEPEGTSSTSPDCIGILRVFTSQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDNQCSVMGLGFRVDGQALQLFAVTPNSVILFSLQNQPPKRQFLDNIGCSTNSVAMSDRLELIIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIADQRNSKNIFNVYDLKNRLIAHSLVVKEVSHMLCEWGNIILVMTDKSVLCIGEKDMESKLDMLFKKNLYTVAINLVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMSQYILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGFASKDHTTLLLNCYTKLKDVEKLNMFIKGEDGVGEHKFDVETAIRVCRAANYHEHAMYVAKKAGKHELYLKILLEDLGRYDEALQYISSLDPSQAGVTVKEYGKILIEHKPMETIDILLRLCTEDGE**************LPSPVDFLNIFVHHPESLMDFLEKYTNKVKDSPAQVEIHNTLLELYLSYDLNFPSISQLNDGVDLRLRSGSGLPKAEYNGEVTADGKDTYK***VLERREKGLRLLKTAWPSELEHPLYDVDLAIILCEMNAFKEGLLYLYEKLKLYKEVIACYTQAHDHEGLIACCKRLGDSGKGGDPSLWVDLLKYFGELGEDCSKEVKEVLTYIERDDILPPIVVLQTLSRNPCLTLSVIKDYIARKL*************IE*Y*

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Vacuolar protein sorting-associated protein 11 homolog	May play a role in vesicle-mediated protein trafficking to lysosomal compartments and in membrane docking/fusion reactions of late endosomes/lysosomes.	probable	Q91W86
Vacuolar protein sorting-associated protein 11 homolog	May play a role in vesicle-mediated protein trafficking to lysosomal compartments and in membrane docking/fusion reactions of late endosomes/lysosomes.	probable	Q9H270

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1XI4, chain A
Confidence level:very confident
Coverage over the Query: 134-551,565-618,664-685,699-788
View the alignment between query and template
View the model in PyMOL

Template: 3LVG, chain A
Confidence level:very confident
Coverage over the Query: 337-543,565-618,664-813
View the alignment between query and template
View the model in PyMOL

Template: 3DW8, chain B
Confidence level:confident
Coverage over the Query: 2-330
View the alignment between query and template
View the model in PyMOL