Citrus Sinensis ID: 037384

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Protein Sequence
MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPASSPASSPTDSSGETPEPDITPSASVAPSGNGSKTVPTTGGTSDGGIVRAPFNFVLLLIFIASRASTIINF
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHccccccccHHHHccccccHHHHccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHccccccccHHHHHHHcccccccHcccccccccccHHHHHHHHHcccccEEEEEEccccccccEEEcHHHHHcccHHcccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MASRGLEMGIVLVLVAMLCggakgqmvctgaltslapclnyvsgnssnpspsccsqlrsvvqsspqclcsvlnggvpslgitINQTLALslpracqvqtppisqckaangpatspasspasspassptdssgetpepditpsasvapsgngsktvpttggtsdggivrapFNFVLLLIFIASRASTIINF
Flexible Loop (DISEMBL)
masrglemGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPASSPASSPTDSSGETPEPDItpsasvapsgngSKTVPTTGGTSDGGIVRAPFNFVLLLIFIAsrastiinf
Low Complexity Region (SEG)
MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGnssnpspsccsQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGpatspasspasspassptdssGETPEPDITPSASVAPSGNGSKTVPTTGGTSDGGIVRAPFNFVLLLIFIASRASTIINF
Disordered region (IsUnstruct)
******EMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVS*************LRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQV******************************************************************GGIVRAPFNFVLLLIFIASRASTI***
Disordered Region (DISOPRED)
*****LEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVS*NS*NP***CCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQ****************************************************************APFNFVLLLIFIASRASTIINF
Disordered Region (DISEMBL)
MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSG*******************SPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPIS*****************************************************TTGGTSDGGIVRAPFNFVLLLIFIASRASTIINF
Disordered Region (DISPRO)
***RGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANG****************************************************DGGIVRAPFNFVLLLIFIASRASTIINF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPASSPASSPTDSSGETPEPDITPSASVAPSGNGSKTVPTTGGTSDGGIVRAPFNFVLLLIFIASRASTIINF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	190	2.2.26 [Sep-21-2011]
Q9ZQI8	169	Non-specific lipid-transf	no	no	0.821	0.923	0.322	1e-12
Q8VYI9	182	Non-specific lipid-transf	no	no	0.715	0.747	0.329	1e-11
Q9ZVC7	176	Xylogen-like protein 11 O	no	no	0.468	0.505	0.336	2e-07
Q9C7F7	193	Uncharacterized GPI-ancho	no	no	0.768	0.756	0.231	9e-07
Q9FFY3	151	Lipid transfer-like prote	no	no	0.594	0.748	0.341	1e-06
Q6ASY2	178	Non-specific lipid transf	no	no	0.436	0.466	0.376	0.0002
P55958	133	Probable non-specific lip	N/A	no	0.378	0.541	0.290	0.0006

>sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1

 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 98/177 (55%), Gaps = 21/177 (11%)

Query: 10  IVLVLVAMLCGG-AKGQMVCTGALTSLAPCLNYVSGNSS--NPSPSCCSQLRSVVQSSPQ 66
           ++  +VA++ G  A   + C+  + ++A CL++V+  S+   P  +CCS L++VV++ P+
Sbjct: 8   MIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPE 67

Query: 67  CLCSVL-NGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPASSPAS 125
           CLC    N G  SLG+T++ + A SLP  C+V  PP ++C    G + S    PA++P  
Sbjct: 68  CLCEAFKNSG--SLGLTLDLSKAASLPSVCKVAAPPSARC----GLSVS-GDPPATAPGL 120

Query: 126 SPTDSSGETPEPDITPSASVAPSGNGSKTVPTTGGTSDGGIVRAPFNFVLLLIFIAS 182
           SPT  +G        P+ S   SG  + T  ++  +SD  ++   F FV+ +  I+S
Sbjct: 121 SPTAGAG-------APALS---SGANAATPVSSPRSSDASLLSVSFAFVIFMALISS 167

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYI9|NLTL5_ARATH Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1

 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 22/158 (13%)

Query: 28  CTGALTSLAPCLNYVS--GNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQ 85
           C+  + ++A CL++VS  G  + P  +CCS L++V+++  QCLC        SLG+T+N 
Sbjct: 43  CSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSA-SLGVTLNI 101

Query: 86  TLALSLPRACQVQTPPISQCKAANGPATSPASSPASSPASSPTDSSGETPEPDITPSASV 145
           T A +LP AC++  P I+ C  +  P+T+P  +P  + A+ P  +    P P        
Sbjct: 102 TKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVA-AAGPETAGFLAPNPS------- 153

Query: 146 APSGN-GSKTVPTTGGTSDGGIVRAPFNFVLLLIFIAS 182
             SGN GS  +PT+  T    ++ A    VL ++F +S
Sbjct: 154 --SGNDGSSLIPTSFTT----VLSA----VLFVLFFSS 181

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZVC7|XYP11_ARATH Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 28  CTGALTSLAPCLNYVS--GNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGV-PSLGITIN 84
           C  ++ +++ C +YV    N   P  +CC +L  +VQSSP+C+C++  GG  P  G+ ++
Sbjct: 40  CLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKLD 99

Query: 85  QTLALSLPRACQVQTPPISQCKAANGPATSPA 116
           +  A  L   C V+ P  S C     P  SPA
Sbjct: 100 KQRAEQLSTICGVKAPSPSLCSVLGFPTISPA 131

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1

 Score = 53.1 bits (126), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 18/164 (10%)

Query: 4   RGLEMGIVLVLVAMLCGGAKGQMV---------CTGALTSLAPCLNYVSGNSSNPSPSCC 54
           +GL + +VLV + ++   A              C      +  CL++ +G ++ PS  CC
Sbjct: 2   KGLHLHLVLVTMTIVASIAAAAPAAPGGALADECNQDFQKVTLCLDFATGKATIPSKKCC 61

Query: 55  SQLRSVVQSSPQCLCSVLN----GGVPSLGITINQTLALSLPRACQVQTPPISQCKAANG 110
             +  + +  P+CLC V+     GG     + + +   + LP +CQ+    I+ C    G
Sbjct: 62  DAVEDIKERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQLPTSCQLHNASITNCPKLLG 121

Query: 111 --PATSPASSPASSPASSPTDSSGETPEPDITPSASVAPSGNGS 152
             P++  A+   ++  ++P   +G++P    TP+ S    G+ S
Sbjct: 122 ISPSSPDAAVFTNNATTTPVAPAGKSPA---TPATSTDKGGSAS 162

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFY3|VAS_ARATH Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2 SV=1

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 10/123 (8%)

Query: 1   MASRGLEMGIVLVLVAMLCG-GAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRS 59
           M  +     +VL+LVA   G    GQ V    L  LAPCLNY++G    P   CC+ L+S
Sbjct: 3   MGMKFFSFYVVLLLVAASSGMRINGQSV--SCLNQLAPCLNYLNGTKEVPQV-CCNPLKS 59

Query: 60  VVQSSPQCLCSVLNGGVPS----LGITINQTLALSLPRACQVQTPPISQCKAANGPATSP 115
           V++++P+CLC +++    S     GI +N   A  LP  C     PI+    + G +T+ 
Sbjct: 60  VIRNNPECLCRMISNRWSSQAERAGIDVND--AQMLPARCGEHVNPIACLTRSRGGSTNS 117

Query: 116 ASS 118
             S
Sbjct: 118 DRS 120

Promotes the number of phloem (pro)cambial and pericycle cells.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ASY2|NLTL1_ORYSJ Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LTPL1 PE=1 SV=1

 Score = 45.8 bits (107), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 28  CTGALTSLAPCLNYVS-GNS--SNPSPSCCSQLRSVVQSSPQ--CLCSVLNGGVPSLGIT 82
           CT     LA CL+YV+ G +  S PS  CC +++  ++ S    CLC+       +L + 
Sbjct: 40  CTAEALKLADCLDYVTPGKTAPSRPSKLCCGEVKGALKDSAAVGCLCAAFTSK--TLPLP 97

Query: 83  INQTLALSLPRACQVQTPPISQCKAANGPATSP 115
           IN T AL LP AC       S+C A   PA SP
Sbjct: 98  INITRALHLPAACGADASAFSKCLA---PAPSP 127

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P55958|NLT21_PARJU Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1

 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 14/86 (16%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPSCCS-------QLRSVVQSSPQCLCSVLNGGVPSLG 80
           C   +  + PCL++V G    PS  CCS       ++++  Q    C C V      + G
Sbjct: 35  CGKVVQDIMPCLHFVKGEEKEPSKECCSGTKKLSEEVKTTEQKREACKCIVR----ATKG 90

Query: 81  IT-INQTLALSLPRACQVQT--PPIS 103
           I+ I   L   +P+ C ++T  PPI+
Sbjct: 91  ISGIKNELVAEVPKKCDIKTTLPPIT 116

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Parietaria judaica (taxid: 33127)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
255567554	207	Nonspecific lipid-transfer protein precu	1.0	0.917	0.603	6e-54
351734500	186	uncharacterized protein LOC100306151 pre	0.973	0.994	0.575	2e-49
224085501	193	predicted protein [Populus trichocarpa]	0.994	0.979	0.639	4e-46
255567560	187	lipid binding protein, putative [Ricinus	0.978	0.994	0.617	1e-45
224062400	197	predicted protein [Populus trichocarpa]	1.0	0.964	0.619	2e-41
388517463	169	unknown [Lotus japonicus]	0.884	0.994	0.502	3e-39
296085219	303	unnamed protein product [Vitis vinifera]	0.963	0.603	0.587	2e-38
359479641	187	PREDICTED: non-specific lipid-transfer p	0.963	0.978	0.587	7e-38
357480991	168	Non-specific lipid-transfer protein [Med	0.878	0.994	0.510	2e-37
359479639	163	PREDICTED: non-specific lipid-transfer p	0.836	0.975	0.494	1e-36

>gi|255567554|ref|XP_002524756.1| Nonspecific lipid-transfer protein precursor, putative [Ricinus communis] gi|223535940|gb|EEF37599.1| Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]

 Score =  215 bits (548), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/207 (60%), Positives = 145/207 (70%), Gaps = 17/207 (8%)

Query: 1   MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSV 60
           MAS  + +G+VLVLV M+ GGA  Q  C   +T+LA CLNY++GNSS PS SCCS L +V
Sbjct: 1   MASSRIRIGLVLVLVTMIYGGAMAQSGCNSVVTNLASCLNYITGNSSTPSASCCSNLANV 60

Query: 61  VQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGP--------- 111
           VQSSPQCLCS+LN   PSLGITINQTLALSLP AC+VQTPPISQCKAA  P         
Sbjct: 61  VQSSPQCLCSLLNNSGPSLGITINQTLALSLPGACKVQTPPISQCKAATAPTISAAPPTS 120

Query: 112 ATSPASS---PASSPASSPTDSSGETPEPDITPSASVAP----SGNGSKTVP-TTGGTSD 163
           A SP +S   P SSP +SP  SS ETPEP ITPSAS  P    +G GSKT+P TT GTSD
Sbjct: 121 AASPTTSVTPPVSSPTNSPPGSSNETPEPAITPSASNVPPSSGTGAGSKTIPSTTDGTSD 180

Query: 164 GGIVRAPFNFVLLLIFIASRASTIINF 190
           G I++AP +F+LL  F+    STI  F
Sbjct: 181 GSIIKAPLHFMLLAFFLLWSGSTITKF 207

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351734500|ref|NP_001238368.1| uncharacterized protein LOC100306151 precursor [Glycine max] gi|255627693|gb|ACU14191.1| unknown [Glycine max]

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/191 (57%), Positives = 135/191 (70%), Gaps = 6/191 (3%)

Query: 1   MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSV 60
           MA RG  + +V V+VA +      Q  CT  LTSL+PCLNY+ G+S  PS SCCSQL S+
Sbjct: 1   MAFRGFALCLVAVIVATMWSQNAAQSGCTNTLTSLSPCLNYIMGSSPTPSASCCSQLSSI 60

Query: 61  VQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPA 120
           VQSSPQCLCSVLNGG  + GITINQTLALSLP AC+VQTPP+SQC+A NGP T     P+
Sbjct: 61  VQSSPQCLCSVLNGGGSTFGITINQTLALSLPGACEVQTPPVSQCQAGNGPTT-----PS 115

Query: 121 SSPASSPTDSSGETPEPDITPSASVAPSGNGSKTVPT-TGGTSDGGIVRAPFNFVLLLIF 179
           ++P  SP+ SS E+P+  ITPSA   PSG GSKTVP+  GG+SDG  ++ PF+ VL L+ 
Sbjct: 116 TAPVGSPSGSSAESPQGSITPSALDFPSGAGSKTVPSIDGGSSDGSAIKVPFHLVLYLLA 175

Query: 180 IASRASTIINF 190
           + S A T   F
Sbjct: 176 LVSCALTFTKF 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085501|ref|XP_002307597.1| predicted protein [Populus trichocarpa] gi|222857046|gb|EEE94593.1| predicted protein [Populus trichocarpa]

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/194 (63%), Positives = 149/194 (76%), Gaps = 5/194 (2%)

Query: 1   MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSV 60
           MAS G+ MG+VLVLVA+ CGGA  Q  CT  L SLAPCLNY++GNSS+PS SCCSQL +V
Sbjct: 1   MASSGIRMGLVLVLVAITCGGAMAQSSCTNTLMSLAPCLNYITGNSSSPSSSCCSQLGNV 60

Query: 61  VQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPA 120
           VQ+SP CLCS+LN    SLGI IN+TLAL+LP AC+VQTP I+QCKAA  P T+ A  P 
Sbjct: 61  VQTSPLCLCSLLNNSGASLGININRTLALNLPGACKVQTPSINQCKAATAP-TASAIPPV 119

Query: 121 SSPASSPTDSSGETPEPDITPSASVAPS----GNGSKTVPTTGGTSDGGIVRAPFNFVLL 176
           SSPASSP DSS +TPEPDITPSAS  PS    G+GSKT+P++ GTSDG IV+AP +FVL 
Sbjct: 120 SSPASSPADSSNQTPEPDITPSASDIPSASGTGSGSKTIPSSTGTSDGSIVKAPLHFVLS 179

Query: 177 LIFIASRASTIINF 190
           ++F+    ST+  F
Sbjct: 180 ILFVTWCGSTVTKF 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567560|ref|XP_002524759.1| lipid binding protein, putative [Ricinus communis] gi|223535943|gb|EEF37602.1| lipid binding protein, putative [Ricinus communis]

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/191 (61%), Positives = 132/191 (69%), Gaps = 5/191 (2%)

Query: 1   MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSV 60
           MA + +EM   LVLV M+C GA  Q  CT AL  LAPCLNYV+GNSS PS SCCSQL +V
Sbjct: 1   MALKRVEMIAFLVLVMMICHGAVAQSGCTSALMGLAPCLNYVTGNSSTPSSSCCSQLATV 60

Query: 61  VQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAA-NGPATSPASSP 119
           VQS PQCLC++LNGG  SLGITINQTLALSLP AC VQTPP+SQC AA NGPATSP  SP
Sbjct: 61  VQSQPQCLCAMLNGGGSSLGITINQTLALSLPGACNVQTPPVSQCNAANNGPATSPIGSP 120

Query: 120 ASSPASSPTDSSGETPEPDITPSASVAPSGNGSKTVPTTGGTSDGGIVRAPFNFVLLLIF 179
            + PA    DSS +TPE   TPS    P+G GSK VP  GGTS   I R   +  +  IF
Sbjct: 121 LTPPA----DSSDDTPETPNTPSIPSFPAGGGSKIVPAAGGTSAASITRIQLHLTIFTIF 176

Query: 180 IASRASTIINF 190
            AS AS +I F
Sbjct: 177 TASCASNVIRF 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062400|ref|XP_002300828.1| predicted protein [Populus trichocarpa] gi|222842554|gb|EEE80101.1| predicted protein [Populus trichocarpa]

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/197 (61%), Positives = 147/197 (74%), Gaps = 7/197 (3%)

Query: 1   MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSV 60
           MAS G  +G+VL+LVA+ CGGA  Q  CT  L SLAPCLNY++GNS++PS SCCSQL +V
Sbjct: 1   MASSGTRIGLVLLLVAITCGGAMAQSSCTNTLMSLAPCLNYITGNSTSPSSSCCSQLGNV 60

Query: 61  VQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCK---AANGPATSPAS 117
           VQ+SPQCLC +LN    SLGI +NQTLAL+LP +C+VQTPPISQC    A    AT P S
Sbjct: 61  VQTSPQCLCLLLNNSGASLGINVNQTLALNLPGSCKVQTPPISQCNAATAPTASATPPVS 120

Query: 118 SPASSPASSPTDSSGETPEPDITPSASVAPS----GNGSKTVPTTGGTSDGGIVRAPFNF 173
           SPASSPASSP DSS +TPEP +TPSAS  PS    G GSKTVP++ GTSDG IV+ P +F
Sbjct: 121 SPASSPASSPADSSDQTPEPALTPSASNIPSASGTGTGSKTVPSSTGTSDGSIVKTPLHF 180

Query: 174 VLLLIFIASRASTIINF 190
           VL ++F+A   ST+  F
Sbjct: 181 VLFVLFVAWSGSTVTKF 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517463|gb|AFK46793.1| unknown [Lotus japonicus]

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/191 (50%), Positives = 116/191 (60%), Gaps = 23/191 (12%)

Query: 1   MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSV 60
           MA R + MG++LV++AMLC G   Q  C   L SL+PCLNY++GNSS PS  CCSQL +V
Sbjct: 1   MAHRKMNMGLILVVMAMLCAGVAAQSSCANVLVSLSPCLNYITGNSSTPSSGCCSQLAAV 60

Query: 61  VQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPA 120
           V+S PQCLC VL GG  SLGI INQT AL+LP AC+VQTPP SQC  A  PA SP    A
Sbjct: 61  VRSQPQCLCQVLGGGASSLGININQTQALALPGACKVQTPPTSQCNTAATPANSPEEPAA 120

Query: 121 SSPASSPTDSSGETPEPDITPSASVAPSGNGSKTVPTTG-GTSDGGIVRAPFNFVLLLIF 179
            SP S                     PSG GSK+ PTTG G+S G  ++   +  LLL+ 
Sbjct: 121 ESPNS--------------------GPSGTGSKSTPTTGDGSSSGNSIK--LSIPLLLVL 158

Query: 180 IASRASTIINF 190
            A+ AST   +
Sbjct: 159 AATYASTFRTY 169

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085219|emb|CBI28714.3| unnamed protein product [Vitis vinifera]

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/194 (58%), Positives = 130/194 (67%), Gaps = 11/194 (5%)

Query: 1   MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSV 60
           M +RG +MG+ LVL+ +L  GA  Q  CT  L  LAPCLNY+SGNSS PS SCCSQL +V
Sbjct: 117 MGTRGNQMGLALVLLTLLWHGAMAQSGCTRVLIGLAPCLNYISGNSSTPSSSCCSQLANV 176

Query: 61  VQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPA 120
           VQS PQCLC+ LN G   LGITINQTLAL LP AC V+TP +SQC AANGP  S     A
Sbjct: 177 VQSQPQCLCAALNSGGAGLGITINQTLALQLPGACNVKTPSVSQCNAANGPTAS-----A 231

Query: 121 SSPASSPTDSSGETPEPDITPSAS---VAPSGNGSKTVPTTGG-TSDGGIVRAPFNFVLL 176
            SP SSP DSS ET  PD+TP+       PSG GSK+VP T G TSDG I+  P    +L
Sbjct: 232 ISPESSPADSSDET--PDVTPTTQSLPSIPSGTGSKSVPATDGSTSDGTIMELPLTLTIL 289

Query: 177 LIFIASRASTIINF 190
            +FIAS AST   F
Sbjct: 290 ALFIASHASTFTGF 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479641|ref|XP_003632313.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Vitis vinifera]

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/194 (58%), Positives = 130/194 (67%), Gaps = 11/194 (5%)

Query: 1   MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSV 60
           M +RG +MG+ LVL+ +L  GA  Q  CT  L  LAPCLNY+SGNSS PS SCCSQL +V
Sbjct: 1   MGTRGNQMGLALVLLTLLWHGAMAQSGCTRVLIGLAPCLNYISGNSSTPSSSCCSQLANV 60

Query: 61  VQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPA 120
           VQS PQCLC+ LN G   LGITINQTLAL LP AC V+TP +SQC AANGP  S     A
Sbjct: 61  VQSQPQCLCAALNSGGAGLGITINQTLALQLPGACNVKTPSVSQCNAANGPTAS-----A 115

Query: 121 SSPASSPTDSSGETPEPDITPSAS---VAPSGNGSKTVPTTGG-TSDGGIVRAPFNFVLL 176
            SP SSP DSS ET  PD+TP+       PSG GSK+VP T G TSDG I+  P    +L
Sbjct: 116 ISPESSPADSSDET--PDVTPTTQSLPSIPSGTGSKSVPATDGSTSDGTIMELPLTLTIL 173

Query: 177 LIFIASRASTIINF 190
            +FIAS AST   F
Sbjct: 174 ALFIASHASTFTGF 187

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480991|ref|XP_003610781.1| Non-specific lipid-transfer protein [Medicago truncatula] gi|355512116|gb|AES93739.1| Non-specific lipid-transfer protein [Medicago truncatula]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/188 (51%), Positives = 114/188 (60%), Gaps = 21/188 (11%)

Query: 1   MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSV 60
           MA   + M +VLV++AM+C GA  Q  CT  L SL+PCLNY++GNSS PS  CCS L SV
Sbjct: 1   MAHSKMNMNLVLVVIAMMCAGATAQSSCTNVLVSLSPCLNYITGNSSTPSSGCCSNLASV 60

Query: 61  VQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPA 120
           V S P CLC VL GG  SLGI+INQT AL+LP AC+VQTPP SQCK  N  A SPA SPA
Sbjct: 61  VSSQPLCLCQVLGGGASSLGISINQTQALALPGACKVQTPPTSQCKTTN--AASPADSPA 118

Query: 121 SSPASSPTDSSGETPEPDITPSASVAPSGNGSKTVPTTG-GTSDGGIVRAPFNFVLLLIF 179
            + A SP                   PSG GSK+ P+TG G+S G  +    +  L LI 
Sbjct: 119 GTEAESPNS----------------VPSGTGSKSTPSTGDGSSSGNSIN--LSIPLFLIL 160

Query: 180 IASRASTI 187
            A+ AS  
Sbjct: 161 AAAYASVF 168

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479639|ref|XP_003632312.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Vitis vinifera] gi|296085218|emb|CBI28713.3| unnamed protein product [Vitis vinifera]

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/188 (49%), Positives = 115/188 (61%), Gaps = 29/188 (15%)

Query: 1   MASRGLEMGIVLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSV 60
           MA   +E  + ++LVA L  GA  Q  CT  + S++PCLNY++GNSS PS  CC+QL SV
Sbjct: 1   MAEPRMETVLTMILVASLWAGAMAQSSCTNVIISMSPCLNYITGNSSTPSSGCCTQLASV 60

Query: 61  VQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGPATSPASSPA 120
           V+S PQCLC VLNGG  SLGI INQT AL+LP AC VQTPPIS+C          ASSPA
Sbjct: 61  VRSQPQCLCEVLNGGGSSLGIQINQTQALALPTACSVQTPPISRCN---------ASSPA 111

Query: 121 SSPASSPTDSSGETPEPDITPSASVAPSGNGSKTVP-TTGGTSDGGIVRAPFNFVLLLIF 179
            SPA +P                    SG+ SKTVP T G +SDG  +++PF+    L+F
Sbjct: 112 DSPAGTPN-------------------SGSRSKTVPATNGDSSDGTSIKSPFSLTSFLVF 152

Query: 180 IASRASTI 187
            AS A+T 
Sbjct: 153 FASCAATF 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
TAIR|locus:2077001	170	AT3G22600 [Arabidopsis thalian	0.552	0.617	0.509	8.6e-30
TAIR|locus:2039366	183	AT2G48130 [Arabidopsis thalian	0.863	0.896	0.366	3.6e-25
TAIR|locus:505006466	156	AT4G14815 [Arabidopsis thalian	0.536	0.653	0.398	2.1e-23
TAIR|locus:1006230669	171	AT1G03103 "AT1G03103" [Arabido	0.852	0.947	0.350	3.6e-18
TAIR|locus:2050492	204	AT2G44300 [Arabidopsis thalian	0.557	0.519	0.330	8.6e-13
TAIR|locus:2201046	205	AT1G05450 "AT1G05450" [Arabido	0.394	0.365	0.376	1.4e-12
TAIR|locus:2039341	200	EDA4 "AT2G48140" [Arabidopsis	0.531	0.505	0.351	3.5e-11
TAIR|locus:2050482	205	AT2G44290 [Arabidopsis thalian	0.557	0.517	0.344	5.8e-11
TAIR|locus:2828523	203	AT3G22620 [Arabidopsis thalian	0.842	0.788	0.274	7.4e-11
TAIR|locus:2035711	227	AT1G55260 [Arabidopsis thalian	0.505	0.422	0.343	5.2e-10

TAIR|locus:2077001 AT3G22600 [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
 Identities = 55/108 (50%), Positives = 66/108 (61%)

Query:     6 LEMGIVLVLVAMLCGGA---KGQMVCTGALTSLAPCLNYVSGXXXXXXXXXXXQLRSVVQ 62
             +EMG+V + V M    +     Q  CT AL S++PCLNY++G           QL  VVQ
Sbjct:     3 MEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQ 62

Query:    63 SSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANG 110
             SSP CLC VLNGG   LGI +NQT AL LPRAC VQTPP+S+C    G
Sbjct:    63 SSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCNTGGG 110

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2039366 AT2G48130 [Arabidopsis thaliana (taxid:3702)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 66/180 (36%), Positives = 97/180 (53%)

Query:    12 LVLVAMLCGGAKGQ--MVCTGALTSLAPCLNYVSGXXXXXXXXXXXQLRSVVQSSPQCLC 69
             + LVA L    K Q    C   LT+L+PCL+Y++G           +L SV++SSPQC+C
Sbjct:    12 VALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCIC 71

Query:    70 SVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGXXXXXXXXXXXXXXXXXXX 129
             S +N  +P++G+ IN+T AL LP AC +QTPP++QC AA G                   
Sbjct:    72 SAVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAPSPTE------- 124

Query:   130 XXGETPEPDITP-SASVAPSG--NGSKTVPTTG-GTSDGGIVRAPFNFVLLLIFIASRAS 185
                +TP+  +TP S   A SG   GSKTVP+ G G+S   +   P +F++  + +   +S
Sbjct:   125 ---KTPDVTLTPTSLPGARSGVGGGSKTVPSVGTGSSSRNVDPLPLHFLMFAVLVVCTSS 181

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:505006466 AT4G14815 [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
 Identities = 41/103 (39%), Positives = 61/103 (59%)

Query:     8 MGIVLVLVAM-LCGGAKGQMVCTGALTSLAPCLNYVSGXXXXXXXXXXXQLRSVVQSSPQ 66
             M ++L +  M +      Q  CT  L S+APCL++++            QL  VV+ S +
Sbjct:     5 MCLILFIALMRVMSIVSAQSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSE 64

Query:    67 CLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAAN 109
             CLC VL+GG   LGI +N+T AL+LP+AC V+TPP S+C + +
Sbjct:    65 CLCQVLDGGGSQLGINVNETQALALPKACHVETPPASRCHSGS 107

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:1006230669 AT1G03103 "AT1G03103" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 61/174 (35%), Positives = 79/174 (45%)

Query:    10 IVLVLVAMLCGGAKG-QMVCTGALTSLAPCLNYVSGXXXXXXXXXXXQLRSVVQSSPQCL 68
             + LV+   L GGA   Q  C   LTSL+PCL Y++G           Q  +VVQSSP+CL
Sbjct:     6 LALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSSPECL 65

Query:    69 CSVLNGGVPSL-GITINQTLALSLPRACQVQTPPISQCKAANGXXXXXXXXXXXXXXXXX 127
             CSV+N    S  G   N+TLAL+LP AC VQTP  S C                      
Sbjct:    66 CSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVGSPRSA 125

Query:   128 XXXXGETPEPDITPSASVAPSGNGSKTVPTTG-GTSDGGIVRAPFNFVLLLIFI 180
                    P P  T S +  PSG  SK  P +   +S   ++   F  + L++ I
Sbjct:   126 -------PSPSGTTSPANTPSG--SKKFPLSNESSSKSNVIILSFVSIALVLAI 170

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2050492 AT2G44300 [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
 Identities = 38/115 (33%), Positives = 57/115 (49%)

Query:     1 MASRGLEM---GIVLVLVAMLCGGA----KGQMVCTGALTSLAPCLNYVSGXXXXXXXXX 53
             M SR + +    I L++VAM+   A    K +  CT  L  +A CL YV G         
Sbjct:     1 MESRKINLMATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDC 60

Query:    54 XXQLRSVVQSSPQCLCSVLNG-GVPSLGITINQTLALSLPRACQVQTPPISQCKA 107
                L+ V+ S+ +CLC ++     P LG+ IN +LAL+LP  C      +++C A
Sbjct:    61 CSGLKQVLNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAAD-VTKCPA 114

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2201046 AT1G05450 "AT1G05450" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
 Identities = 29/77 (37%), Positives = 46/77 (59%)

Query:    32 LTSLAPCLNYVSGXXXXXXXXXXXQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSL 91
             L+S+  C ++++G            L+S+  +   CLC ++  GVP + I IN+TLA+SL
Sbjct:    38 LSSVTGCTSFLTGGGSFPTSDCCGALKSLTGTGMDCLCLIVTAGVP-ISIPINRTLAISL 96

Query:    92 PRACQVQTPPISQCKAA 108
             PRAC +   P+ QCKA+
Sbjct:    97 PRACGIPGVPV-QCKAS 112

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2039341 EDA4 "AT2G48140" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 39/111 (35%), Positives = 62/111 (55%)

Query:     5 GLEMGIVLVLVAMLCGGAKGQMV---CTGALTS-LAPCLNYVSGXXXXXXXXXXX---QL 57
             GL + IV+++ + + GG +GQ +   CT ++ S   PCLN+++G               L
Sbjct:     3 GLTL-IVVMMSSFMLGG-QGQQISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSL 60

Query:    58 RSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAA 108
             +++  +   C C +L   VP     IN+TLAL+LPRAC++   PI QC+AA
Sbjct:    61 KTLTNTGMGCACLILTANVPLPTGFINRTLALALPRACKMGGVPI-QCQAA 110

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009561 "megagametogenesis" evidence=IMP

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2050482 AT2G44290 [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 40/116 (34%), Positives = 59/116 (50%)

Query:     1 MASRGLEM---GIVLVLVAML---CGGAKGQ--MVCTGALTSLAPCLNYVSGXXXXXXXX 52
             M SR +++    I L++VAM+    G  KG+    CT  L  +A CL YV G        
Sbjct:     1 MESRKIKVMATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPD 60

Query:    53 XXXQLRSVVQSSPQCLCSVLNG-GVPSLGITINQTLALSLPRACQVQTPPISQCKA 107
                 L+ V+ S  +CLC ++     P LG+ +N +LAL+LP  C   T  I++C A
Sbjct:    61 CCSGLKQVINSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHA-TADITKCPA 115

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2828523 AT3G22620 [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 48/175 (27%), Positives = 76/175 (43%)

Query:     8 MGIVLVLVAMLCGGAKGQMV----CTGAL-TSLAPCLNYVSGXXXXXXXXXXX---QLRS 59
             + +V+ ++A+L    +GQ      CT ++ T+++PC+ +++                LRS
Sbjct:     5 ISLVVAMIAVLALPIRGQQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRS 64

Query:    60 VVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCKAANGXXXXXXXXX 119
             +      CLC ++ G VP   I IN+T A+SLPRAC +   P+ QC+A N          
Sbjct:    65 LTTGGMGCLCLIVTGTVP-FNIPINRTTAVSLPRACNMPRVPL-QCQA-NIAPAAAPGPA 121

Query:   120 XXXXXXXXXXXXGETPEPDITPSASVAPSGNGSKTVPTTGG---TSD-GGIVRAP 170
                          +   P+ TP+A    S       P+  G   TSD GG    P
Sbjct:   122 ATFGPSMSPGPETDPIVPEPTPAAQTPQSDTTRPFTPSVDGGAPTSDDGGSTSRP 176

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2035711 AT1G55260 [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 35/102 (34%), Positives = 50/102 (49%)

Query:    10 IVLVLVAMLCG-G----AKGQMVCTGALTSLAPCLNYVSGXXXXXXXXXXXQLRSVVQSS 64
             I +V+ +ML G G    A+ +  CT  L  L+ C+ YV G               V++ S
Sbjct:    53 ITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKS 112

Query:    65 PQCLCSVLNG-GVPSLGITINQTLALSLPRACQVQTPPISQC 105
              +C+C ++     P LGI IN TLA  LP AC +  P I+ C
Sbjct:   113 EKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDC 154

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0002044001 hypothetical protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity) (194 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	190
cd00010	63	cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibit	3e-19
pfam14368	95	pfam14368, LTP_2, Probable lipid transfer	3e-12
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	3e-10
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	1e-08
cd01960	89	cd01960, nsLTP1, nsLTP1: Non-specific lipid-transf	1e-07
TIGR00601	378	TIGR00601, rad23, UV excision repair protein Rad23	8e-05
cd04660	73	cd04660, nsLTP_like, nsLTP_like: Non-specific lipi	0.001
pfam07462	574	pfam07462, MSP1_C, Merozoite surface protein 1 (MS	0.003

>gnl|CDD|237980 cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

 Score = 77.1 bits (190), Expect = 3e-19
 Identities = 33/63 (52%), Positives = 44/63 (69%)

Query: 35 LAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRA 94
          LAPCL+Y++G ++ P   CCS L+SVV+S P+CLC+ LNG   SL    N T AL+LP A
Sbjct: 1  LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAA 60

Query: 95 CQV 97
          C +
Sbjct: 61 CGL 63

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges. Length = 63

>gnl|CDD|222713 pfam14368, LTP_2, Probable lipid transfer

 Score = 59.4 bits (144), Expect = 3e-12
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 11  VLVLVAMLCGGAKGQMVCTGALTSLAPCLNYVSGN-SSNPSPSCCSQLRSVVQSSPQCLC 69
           + VL+A                 SL PCL Y   N ++ PSP+CC+ L++ V++   CLC
Sbjct: 2   LAVLLASAAAAPPAPASAASCADSLLPCLGYCYVNGTAAPSPACCAALKAAVKADVPCLC 61

Query: 70  SVLNGGVPSLGITINQTLALSLPRACQVQTPPISQC 105
            ++   + + G  IN T A++LP+AC + +PP S+C
Sbjct: 62  DLVTSPLAA-GFGINLTRAVALPKACGLTSPP-SKC 95

The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines, paired in various ways. Length = 95

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 54.1 bits (130), Expect = 3e-10
 Identities = 32/79 (40%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGIT-INQT 86
           C   L  LAPC  Y+ G    PS  CCSQLR +     QC C+ +      LGI  IN  
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQVPSQQCCSQLRQL---QAQCRCTAIRA--IVLGIEGINPQ 55

Query: 87  LALSLPRACQVQTPPISQC 105
            A SLP  C V  P    C
Sbjct: 56  AAASLPSMCGVNVPYGIDC 74

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 49.7 bits (118), Expect = 1e-08
 Identities = 32/79 (40%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPS--CCSQLRSVVQSSPQCLCSVLNGGVPS--LGITI 83
           C   L  LAPCL+Y+ G S    PS  CCSQLR +     QC C  L   V        +
Sbjct: 1   CGQVLLQLAPCLSYLVGGSRGAPPSQQCCSQLRGLNS--AQCRCLALRAAVLGILEIPGL 58

Query: 84  NQTLALSLPRACQVQTPPI 102
           N   A SLP AC V  P  
Sbjct: 59  NAQNAASLPSACGVPPPYT 77

Length = 79

>gnl|CDD|238926 cd01960, nsLTP1, nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSP-----QCLCSVLNGGVPSLGIT 82
           C    + LAPCL Y++G    PSP+CCS ++S+   +      Q  C+ L      +   
Sbjct: 3   CGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGIS-G 61

Query: 83  INQTLALSLPRACQVQTP-PIS 103
           +N   A  LP  C V  P PIS
Sbjct: 62  LNPGRAAGLPGKCGVSIPYPIS 83

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans. Length = 89

>gnl|CDD|233045 TIGR00601, rad23, UV excision repair protein Rad23

 Score = 41.8 bits (98), Expect = 8e-05
 Identities = 14/69 (20%), Positives = 28/69 (40%)

Query: 102 ISQCKAANGPATSPASSPASSPASSPTDSSGETPEPDITPSASVAPSGNGSKTVPTTGGT 161
           +S+ K   G    PA++P S+P  +P+  +         P+++V       ++   T   
Sbjct: 74  VSKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPE 133

Query: 162 SDGGIVRAP 170
           S    V + 
Sbjct: 134 SPSTSVPSS 142

All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University) [DNA metabolism, DNA replication, recombination, and repair]. Length = 378

>gnl|CDD|240018 cd04660, nsLTP_like, nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 28  CTGALTSLAPCLNYVSGNSS--NPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQ 85
           C   L  LA C  YV+G +    PS  CC+ LR        CLC      V  +   I+ 
Sbjct: 1   CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSLVLQI---IDP 54

Query: 86  TLALSLPRACQVQTPPIS 103
             A+ LP  C +  PP S
Sbjct: 55  DKAVYLPAKCGLPLPPSS 72

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes. Length = 73

>gnl|CDD|219419 pfam07462, MSP1_C, Merozoite surface protein 1 (MSP1) C-terminus

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 91  LPRACQVQTPPISQCKAANGPATSPASSPAS-SPASSPTDSSGETPEPDITPSASVAPSG 149
           LP+    +    +       P    A SP S  PA S   +SG T  P    S SV   G
Sbjct: 258 LPKGTTQEAKVTT---VVTPPQADAAPSPLSVRPAGSSGSASGSTQIP---TSGSVLGPG 311

Query: 150 NGS 152
             +
Sbjct: 312 AAA 314

This family represents the C-terminal region of merozoite surface protein 1 (MSP1) which are found in a number of Plasmodium species. MSP-1 is a 200-kDa protein expressed on the surface of the P. vivax merozoite. MSP-1 of Plasmodium species is synthesised as a high-molecular-weight precursor and then processed into several fragments. At the time of red cell invasion by the merozoite, only the 19-kDa C-terminal fragment (MSP-119), which contains two epidermal growth factor-like domains, remains on the surface. Antibodies against MSP-119 inhibit merozoite entry into red cells, and immunisation with MSP-119 protects monkeys from challenging infections. Hence, MSP-119 is considered a promising vaccine candidate. Length = 574

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	190
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.61
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.57
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.55
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.52
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.3
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	99.07
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.69
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	96.25
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	95.94
cd00261	110	AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and	82.05

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.61  E-value=3.8e-16  Score=114.32  Aligned_cols=73  Identities=34%  Similarity=0.729  Sum_probs=62.8

Q ss_pred             CChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhcC-----CcccccccccCCCCCCCcccChhhhhccccccccccC
Q 037384           27 VCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQS-----SPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTP  100 (190)
Q Consensus        27 ~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s-----~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~p  100 (190)
                      +|..++..|.||++|++|+...|++.||++++++++.     +++|+|.++++....+. .||.+|+++||++|||+++
T Consensus         2 ~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~-~i~~~~a~~LP~~C~v~~~   79 (89)
T cd01960           2 SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGIS-GLNPGRAAGLPGKCGVSIP   79 (89)
T ss_pred             CHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccC-CCCHHHHHhChHhcccCCC
Confidence            6999999999999999988778999999999998753     56899999987654442 2899999999999999976

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.57  E-value=1.6e-16  Score=116.18  Aligned_cols=79  Identities=49%  Similarity=0.941  Sum_probs=49.4

Q ss_pred             CCCCChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhcCCcccccccccCCCCCCCcccChhhhhccccccccccCCCC
Q 037384           24 GQMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPIS  103 (190)
Q Consensus        24 A~~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~pp~s  103 (190)
                      ...+|.+.+....+|+.|+.++ ..|+..||+++|++++.+++|||+++++.. ..+++||.+|++.||++||++.++ +
T Consensus        18 ~~~~c~~~l~~c~~~~~~~~~~-~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~-~~~~~in~~~a~~Lp~~Cg~~~~~-~   94 (96)
T PF14368_consen   18 CCCSCANSLLPCCPCLCYVTGG-PAPSAACCSALKSVVQADPPCLCQLLNSPG-APGFGINVTRALALPAACGVPVPP-S   94 (96)
T ss_dssp             BTTB-HCCCCHH--HHHHHCC------HHHHHHHCC----HCCHHHCCCC-CC-HCHHCCTCHHHHHHHHHCTSS-S---
T ss_pred             CcchhHHHHhccccchhccCCC-CCCCHHHHHHHHHhccCCCCCHHHhcCccc-cccCCcCHHHHHHHHHHcCCCCCC-C
Confidence            4567765433333348888854 579999999999998889999999999865 234579999999999999999988 7


Q ss_pred             CC
Q 037384          104 QC  105 (190)
Q Consensus       104 ~C  105 (190)
                      +|
T Consensus        95 ~C   96 (96)
T PF14368_consen   95 KC   96 (96)
T ss_dssp             --
T ss_pred             CC
Confidence            87

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.55  E-value=1.5e-15  Score=107.87  Aligned_cols=71  Identities=39%  Similarity=0.779  Sum_probs=59.9

Q ss_pred             ChhhhcCccccHHhhcCCC--CCCChhhhhhhhhhhcCCcccccccccCCCCCCCcccChhhhhccccccccccCCCCCC
Q 037384           28 CTGALTSLAPCLNYVSGNS--SNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQC  105 (190)
Q Consensus        28 C~~~l~~L~pCl~yvtg~~--~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~pp~s~C  105 (190)
                      |...+..|.+|++|+++++  ..|+..||+++|++   +++|+|.+++...  +. .||.+||.+||++|||++|+ ++|
T Consensus         1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~---~~~C~C~~~~~~~--~~-~i~~~~a~~Lp~~Cgv~~p~-~~C   73 (73)
T cd04660           1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSLV--LQ-IIDPDKAVYLPAKCGLPLPP-SSC   73 (73)
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcC---CcCCEeeccCCCc--cc-ccCHHHHHHHHHHcCCCCCC-CCC
Confidence            5666788999999999876  36899999999986   6679999887532  33 38999999999999999998 888

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.52  E-value=5.4e-15  Score=101.17  Aligned_cols=63  Identities=52%  Similarity=0.962  Sum_probs=54.0

Q ss_pred             ccccHHhhcCCCCCCChhhhhhhhhhhcCCcccccccccCCCCCCCcccChhhhhcccccccc
Q 037384           35 LAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQV   97 (190)
Q Consensus        35 L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV   97 (190)
                      |.||++|++++...|+..||++++++++.++.|||+++++........+|.++++.||++|||
T Consensus         1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence            679999999887789999999999999889999999999875433222379999999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.30  E-value=9.2e-13  Score=92.48  Aligned_cols=61  Identities=36%  Similarity=0.704  Sum_probs=52.5

Q ss_pred             cCccccHHhhcCCCCCCChhhhhhhhhhhcCCcccccccccCCCCCCCcccChhhhhccccccccccC
Q 037384           33 TSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTP  100 (190)
Q Consensus        33 ~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~p  100 (190)
                      .+|.+|++|++++ ..|+..||+.||+    +..|||.++++..  ++..||.++|++||++|||.+|
T Consensus         4 ~~L~~C~~ai~~~-~~Ps~~CC~~Lk~----~~~CLC~y~~~p~--l~~~i~~~~A~~l~~~Cgv~~P   64 (66)
T cd01959           4 TQLSPCLPAILGG-SPPSAACCAKLKE----QQSCLCQYAKNPS--LKQYVNSPNARKVLAACGVPYP   64 (66)
T ss_pred             hhcccCHHHHhCC-CCCCHHHHHHHhc----CCCCeeeeecCcc--HHhhcCcHHHHHHHHHcCCCCC
Confidence            4799999999976 4799999999998    4489999998753  4445899999999999999885

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=99.07  E-value=1.1e-10  Score=80.73  Aligned_cols=75  Identities=44%  Similarity=0.828  Sum_probs=59.5

Q ss_pred             ChhhhcCccccHHhhcCC--CCCCChhhhhhhhhhhcCCcccccccccCCCCCCCc--ccChhhhhccccccccccCCCC
Q 037384           28 CTGALTSLAPCLNYVSGN--SSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGI--TINQTLALSLPRACQVQTPPIS  103 (190)
Q Consensus        28 C~~~l~~L~pCl~yvtg~--~~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~slg~--~in~trA~~LP~~CgV~~pp~s  103 (190)
                      |...+..+.+|++|+++.  ...|+..||++|+++.  +..|+|..++.....+..  .+|..++..||+.||+..++ +
T Consensus         1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~--~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~~~~-~   77 (79)
T smart00499        1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN--SAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVPPPY-T   77 (79)
T ss_pred             ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc--ccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCCCCC-C
Confidence            666777888999999976  4578899999999986  788999998865432211  25899999999999998764 4


Q ss_pred             CC
Q 037384          104 QC  105 (190)
Q Consensus       104 ~C  105 (190)
                      .|
T Consensus        78 ~C   79 (79)
T smart00499       78 DC   79 (79)
T ss_pred             CC
Confidence            55

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.69  E-value=1.6e-10  Score=83.75  Aligned_cols=69  Identities=38%  Similarity=0.841  Sum_probs=55.7

Q ss_pred             cCccccHHhhcCCCCCCChhhhhhhhhhhcCCcccccccccCCCCCC---------CcccChhhhhccccccccccCCCC
Q 037384           33 TSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSL---------GITINQTLALSLPRACQVQTPPIS  103 (190)
Q Consensus        33 ~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~sl---------g~~in~trA~~LP~~CgV~~pp~s  103 (190)
                      ..|.+|+.|++++...|+..||++|+++   ++.|.|..|+......         ...++..+|..||+.|||..+. .
T Consensus        13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l---~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~~-~   88 (90)
T PF00234_consen   13 VRLSPCLPYLQGGCQQPSQQCCQQLRQL---DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPPY-T   88 (90)
T ss_dssp             SHHHGGHHHHTTSSSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSSS-S
T ss_pred             ccccccHHHHhcccccchHHHhHHHHHH---hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCCC-C
Confidence            4589999999987667999999999999   8999999987643221         1367899999999999999875 3


Q ss_pred             CC
Q 037384          104 QC  105 (190)
Q Consensus       104 ~C  105 (190)
                      +|
T Consensus        89 ~C   90 (90)
T PF00234_consen   89 DC   90 (90)
T ss_dssp             -G
T ss_pred             CC
Confidence            45

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=96.25  E-value=0.0014  Score=48.31  Aligned_cols=77  Identities=30%  Similarity=0.626  Sum_probs=54.0

Q ss_pred             ChhhhcCccccHHhhc----CCCCCCChhhhhhhhhhhcCC-cccccccccCCCCCCC-cccChhhhhc-cccccccccC
Q 037384           28 CTGALTSLAPCLNYVS----GNSSNPSPSCCSQLRSVVQSS-PQCLCSVLNGGVPSLG-ITINQTLALS-LPRACQVQTP  100 (190)
Q Consensus        28 C~~~l~~L~pCl~yvt----g~~~~Ps~~CC~~lk~v~~s~-~~CLC~~l~~~~~slg-~~in~trA~~-LP~~CgV~~p  100 (190)
                      |-....+|.-|.+.+-    .-+..+...||.-++.+.+.+ ..|||..++...  +| +++|....+. |-+.||-+.|
T Consensus         2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~v--lg~i~~~ipv~l~~lln~CGk~~p   79 (85)
T PF14547_consen    2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANV--LGLINVNIPVALNLLLNACGKTVP   79 (85)
T ss_pred             CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhc--ccccccccccHHHHHHHHhCCcCc
Confidence            4444457888888871    112247889999999997765 579999998654  45 4554444444 5688999988


Q ss_pred             CCCCCC
Q 037384          101 PISQCK  106 (190)
Q Consensus       101 p~s~C~  106 (190)
                      +.++|.
T Consensus        80 ~gf~C~   85 (85)
T PF14547_consen   80 SGFTCP   85 (85)
T ss_pred             CCCcCC
Confidence            888884

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=95.94  E-value=0.0042  Score=45.78  Aligned_cols=77  Identities=29%  Similarity=0.638  Sum_probs=54.2

Q ss_pred             CChhhhcCccccHHhhcCC----CCCCChhhhhhhhhhhcCC-cccccccccCCCCCCCcccChhhhhcc-ccccccccC
Q 037384           27 VCTGALTSLAPCLNYVSGN----SSNPSPSCCSQLRSVVQSS-PQCLCSVLNGGVPSLGITINQTLALSL-PRACQVQTP  100 (190)
Q Consensus        27 ~C~~~l~~L~pCl~yvtg~----~~~Ps~~CC~~lk~v~~s~-~~CLC~~l~~~~~slg~~in~trA~~L-P~~CgV~~p  100 (190)
                      .|-....+|.-|.+-+-.-    +..|..+||.-++.+.+-+ ..|||..++...  +|+++|..-.+.+ -..||-..|
T Consensus         3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~--lgi~~~~pv~l~llln~CGk~~P   80 (85)
T cd01958           3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANI--LGISINIPVALSLLLNSCGRNVP   80 (85)
T ss_pred             CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeeccc--cCcccccChhHHHHHHHHcCcCC
Confidence            3544445677777766311    2357789999999997765 579999998653  5666665555554 467999998


Q ss_pred             CCCCC
Q 037384          101 PISQC  105 (190)
Q Consensus       101 p~s~C  105 (190)
                      +.++|
T Consensus        81 ~gf~C   85 (85)
T cd01958          81 PGFTC   85 (85)
T ss_pred             CCCcC
Confidence            88777

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins

Probab=82.05  E-value=0.23  Score=37.05  Aligned_cols=69  Identities=25%  Similarity=0.514  Sum_probs=45.0

Q ss_pred             cCccccHHhhcCC---CC-----------CCChhhhhhhhhhhcCCcccccccccCCCCC----C----------CcccC
Q 037384           33 TSLAPCLNYVSGN---SS-----------NPSPSCCSQLRSVVQSSPQCLCSVLNGGVPS----L----------GITIN   84 (190)
Q Consensus        33 ~~L~pCl~yvtg~---~~-----------~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~s----l----------g~~in   84 (190)
                      ..|.+|..|+.-.   ..           ..-..||..|+.+   +..|-|..|......    .          ....-
T Consensus        13 ~~L~~C~~yl~qq~~~~~~~~~~~~~~~~~~~qqCCqqL~~i---~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (110)
T cd00261          13 QPLNSCREYLRQQCSGVGGPPVWPQQSCEVLRQQCCQQLAQI---PEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERM   89 (110)
T ss_pred             ccCcHHHHHHHHhccCCCCCCCcCccccHHHHHHHHHHHHhC---cHhhhHHHHHHHHHHHHHhhhccccccCcChHHHH
Confidence            3688999998521   10           1237899999998   788999987532110    0          01223


Q ss_pred             hhhhhccccccccccCCCCCCC
Q 037384           85 QTLALSLPRACQVQTPPISQCK  106 (190)
Q Consensus        85 ~trA~~LP~~CgV~~pp~s~C~  106 (190)
                      ...|..||..|||..  ...|.
T Consensus        90 ~~~a~~Lp~~C~~~~--~~~C~  109 (110)
T cd00261          90 RQAAQNLPSMCNLYP--PPYCP  109 (110)
T ss_pred             HHHHHhhchhcCCCC--CCCCC
Confidence            457889999999986  23564

They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	190
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	8e-13
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	5e-10
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	5e-09
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	7e-09
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	1e-08
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	2e-05

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A* Length = 93

 Score = 60.6 bits (147), Expect = 8e-13
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSP-----QCLCSVLNGGVPSLGIT 82
           C    +++APC++Y  G  S PS  CCS +RS+  ++      +  C+ L      +   
Sbjct: 4   CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS-G 62

Query: 83  INQTLALSLPRACQVQTP-PIS 103
           +N   A S+P  C V  P  IS
Sbjct: 63  LNAGNAASIPSKCGVSIPYTIS 84

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A* Length = 92

 Score = 53.3 bits (128), Expect = 5e-10
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPSCCS--QLRSVVQSSP--QCLCSVLNGGVPSLGITI 83
           C    +SLAPC+ YV G  + P   C     + ++ +++P  Q  C+ L     S+   +
Sbjct: 4   CGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-GV 62

Query: 84  NQTLALSLPRACQVQTP-PIS 103
           N   A +LP  C V  P  IS
Sbjct: 63  NPNNAAALPGKCGVSIPYKIS 83

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A* Length = 90

 Score = 50.6 bits (121), Expect = 5e-09
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPSCCS--QLRSVVQSSP--QCLCSVLNGGVPSLGITI 83
           C    + + PCL+YV G        C     L +  +S    Q  C+ L G    +   +
Sbjct: 3   CGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NL 61

Query: 84  NQTLALSLPRACQVQTP-PIS 103
           N+  A S+P  C V  P  IS
Sbjct: 62  NEDNARSIPPKCGVNLPYTIS 82

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum} Length = 91

 Score = 50.2 bits (120), Expect = 7e-09
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 9/82 (10%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSP-----QCLCSVLNGGVPSLGIT 82
           C    ++LAPCL Y+      P   CC  ++++V S+      Q  C+ L     ++   
Sbjct: 4   CGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS-G 60

Query: 83  INQTLALSLPRACQVQTP-PIS 103
           IN   A  LP  C V  P  IS
Sbjct: 61  INLGKAAGLPSTCGVNIPYKIS 82

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var} Length = 91

 Score = 49.5 bits (118), Expect = 1e-08
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPSCCS--QLRSVVQSSP--QCLCSVLNGGVPSLGITI 83
           C     +LA C+ ++      P   C     + +  +++   + +CS L     ++   I
Sbjct: 3   CGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR-GI 61

Query: 84  NQTLALSLPRACQVQTP-PIS 103
           N   A +LP  C V  P  IS
Sbjct: 62  NPNNAEALPGKCGVNIPYKIS 82

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana} Length = 77

 Score = 40.4 bits (94), Expect = 2e-05
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 24  GQMVCTGALTSLAPCLNYVSG-NSSNPSPSCCSQLRSVVQSSPQCLCSVLNGG-VPSLGI 81
              +C  +   L  C   VS  N ++PS  CC+ L+    +   CLC   N   + S G+
Sbjct: 1   AIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQH---ADFACLCGYKNSPWLGSFGV 57

Query: 82  TINQTLALSLPRACQVQTPP 101
             +  LA +LP+ C +   P
Sbjct: 58  --DPELASALPKQCGLANAP 75

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	190
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	99.7
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	99.64
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	99.62
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	99.61
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	99.59
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	99.59
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	99.53
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	99.42
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	99.4
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	95.74
3ob4_A	500	Conglutin, maltose ABC transporter periplasmic pro	95.19
1sm7_A	109	Recombinant IB pronapin; all alpha-helix, right-ha	91.64
1pnb_B	75	Napin BNIB; napin IA and IB, albumin SEED protein,	90.37
2lvf_A	114	2S albumin; allergen, copper binding, hydrophobic	89.87
1hss_A	124	0.19 alpha-amylase inhibitor; cereal inhibitor, an	89.39
1s6d_A	103	Albumin 8; all helix, folded LEAF, right-handed su	85.87
2ds2_B	72	Sweet protein mabinlin-2 chain B; plant protein, S	84.25
1bea_A	127	Bifunctional amylase/serine protease inhibitor; am	80.67
1b1u_A	122	Protein (alpha-amylase/trypsin inhibitor RATI); bi	80.16

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=99.70  E-value=7.4e-19  Score=129.77  Aligned_cols=82  Identities=30%  Similarity=0.773  Sum_probs=69.2

Q ss_pred             CCChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhcC-----CcccccccccCCCCCCCcccChhhhhccccccccccC
Q 037384           26 MVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQS-----SPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTP  100 (190)
Q Consensus        26 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s-----~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~p  100 (190)
                      .+|.+++..|.||++|++|++ .|++.||++++++++.     +++|+|++|++.+..+ ..||.+||+.||++|||++|
T Consensus         2 isC~~v~~~L~pCl~Yv~g~~-~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~-~~in~~~a~~LP~~CgV~~p   79 (93)
T 2ljo_A            2 ISCGAVTSDLSPCLTYLTGGP-GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSI-TKLNTNNAAALPGKCGVNIP   79 (93)
T ss_dssp             CSSHHHHHHHHHHHHHHTTSS-CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGC-TTCCHHHHHHHHHHHTCCCS
T ss_pred             CCHHHHHHHHHhHHHHHcCCC-CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhcc-CCcCHHHHHhhhHhcCCCCC
Confidence            689999999999999999875 6999999999998642     6799999999865443 47999999999999999998


Q ss_pred             -CC---CCCCCCC
Q 037384          101 -PI---SQCKAAN  109 (190)
Q Consensus       101 -p~---s~C~~~~  109 (190)
                       ++   .+|+++.
T Consensus        80 ~~Is~~~dC~~v~   92 (93)
T 2ljo_A           80 YKISTTTNCNTVK   92 (93)
T ss_dssp             SCCSTTCCGGGCC
T ss_pred             CCCCCCCCCCCCC
Confidence             44   4787653

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=99.64  E-value=1.3e-17  Score=122.73  Aligned_cols=80  Identities=33%  Similarity=0.750  Sum_probs=64.3

Q ss_pred             CCChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhc---C----CcccccccccCCCCCCCcccChhhhhccccccccc
Q 037384           26 MVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQ---S----SPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQ   98 (190)
Q Consensus        26 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~---s----~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~   98 (190)
                      .+|.+++..|.||++|++++...|+..||++|+++++   +    +..|+|.  +.....++ +||.++|+.||++|||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~--~~~~~~~~-~in~~~A~~LP~~C~v~   78 (93)
T 1afh_A            2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCL--KNAAAGVS-GLNAGNAASIPSKCGVS   78 (93)
T ss_dssp             CSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHH--HHHHTTST-TCCHHHHHHHHHHHHCC
T ss_pred             CChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEee--cccccccc-CcCHHHHHHHHHHcCCC
Confidence            5799999999999999998877799999999999862   2    2467774  44334454 79999999999999999


Q ss_pred             cC-CCC---CCCCC
Q 037384           99 TP-PIS---QCKAA  108 (190)
Q Consensus        99 ~p-p~s---~C~~~  108 (190)
                      +| +++   +|+.+
T Consensus        79 ~p~~is~~~dC~~v   92 (93)
T 1afh_A           79 IPYTISTSTDCSRV   92 (93)
T ss_dssp             CSSCCSTTCCSSSC
T ss_pred             CCCCCCCCCCCccC
Confidence            87 443   78764

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=99.62  E-value=2e-17  Score=121.11  Aligned_cols=78  Identities=33%  Similarity=0.736  Sum_probs=63.4

Q ss_pred             CCChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhc---C----CcccccccccCCCCCCCcccChhhhhccccccccc
Q 037384           26 MVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQ---S----SPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQ   98 (190)
Q Consensus        26 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~---s----~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~   98 (190)
                      .+|.+++..|.||++|+++++. |+..||++|+++++   +    +..|+|  +++.+.+++ +||.++|++||++|||+
T Consensus         1 i~C~~v~~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~   76 (90)
T 1bwo_A            1 IDCGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIARGIH-NLNEDNARSIPPKCGVN   76 (90)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHTTCT-TCCHHHHHTHHHHHTCC
T ss_pred             CCHHHHHHhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchhccC-CcCHHHHHHHHHHcCCC
Confidence            3699999999999999998876 99999999999863   2    457888  566555564 79999999999999999


Q ss_pred             cC-CCC---CCCC
Q 037384           99 TP-PIS---QCKA  107 (190)
Q Consensus        99 ~p-p~s---~C~~  107 (190)
                      +| +++   +|++
T Consensus        77 ~p~~is~~~dC~~   89 (90)
T 1bwo_A           77 LPYTISLNIDCSR   89 (90)
T ss_dssp             CSSCCCTTCCGGG
T ss_pred             CCCCCCCCCCCCC
Confidence            87 443   6654

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=99.61  E-value=2.9e-17  Score=120.59  Aligned_cols=78  Identities=32%  Similarity=0.726  Sum_probs=64.0

Q ss_pred             CCChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhcC-------CcccccccccCCCCCCCcccChhhhhccccccccc
Q 037384           26 MVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQS-------SPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQ   98 (190)
Q Consensus        26 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s-------~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~   98 (190)
                      .+|.+++..|.||++|++++.. |+ .||++|+++++.       +..|+|  +++...+++ +||.+||+.||++|||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~   76 (91)
T 1t12_A            2 ITCGQVTSNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGAIS-GINLGKAAGLPSTCGVN   76 (91)
T ss_dssp             CCHHHHHHHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHHCT-TCCHHHHHHHHHHTTCC
T ss_pred             CChHHHHHhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCC--ccccccccC-CcChhHHHHHHHHcCCC
Confidence            5799999999999999998877 88 999999998753       467888  455444565 79999999999999999


Q ss_pred             cC-CCC---CCCCC
Q 037384           99 TP-PIS---QCKAA  108 (190)
Q Consensus        99 ~p-p~s---~C~~~  108 (190)
                      +| +++   +|+.+
T Consensus        77 ~p~~is~~~dC~~v   90 (91)
T 1t12_A           77 IPYKISPSTDCSKV   90 (91)
T ss_dssp             CSSCSSSSSCCTTC
T ss_pred             CCCCCCCCCCCccC
Confidence            87 443   78764

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=99.59  E-value=2.6e-17  Score=120.95  Aligned_cols=79  Identities=34%  Similarity=0.709  Sum_probs=64.0

Q ss_pred             CCChhhhcCccccHHhhcCCCCCCChhhhhhhhhhh-------cCCcccccccccCCCCCCCcccChhhhhccccccccc
Q 037384           26 MVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVV-------QSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQ   98 (190)
Q Consensus        26 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~-------~s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~   98 (190)
                      .+|.+++..|.||++|++++. .|+..||++||+++       +.+..|||....  ...++ +||.++|++||++|||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~--~~~~~-~in~~~A~~LP~~Cgv~   77 (92)
T 2alg_A            2 ITCGQVSSSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQL--SASVP-GVNPNNAAALPGKCGVS   77 (92)
T ss_dssp             CCHHHHHHHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHH--HHHST-TCCHHHHHHHHHHTTCC
T ss_pred             CChHHHHHhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccCc--ccccC-ccChHHHHHHHHHcCCC
Confidence            579999999999999999876 58899999999986       345789997533  33455 79999999999999999


Q ss_pred             cC-CCC---CCCCC
Q 037384           99 TP-PIS---QCKAA  108 (190)
Q Consensus        99 ~p-p~s---~C~~~  108 (190)
                      +| +++   +|+++
T Consensus        78 ~p~~is~~~dC~~v   91 (92)
T 2alg_A           78 IPYKISASTNCATV   91 (92)
T ss_dssp             CSSCSSTTSCGGGC
T ss_pred             CCCCCCCCCCCccC
Confidence            87 343   67654

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=99.59  E-value=1.2e-16  Score=117.19  Aligned_cols=79  Identities=29%  Similarity=0.693  Sum_probs=63.9

Q ss_pred             CCChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhcC-------CcccccccccCCCCCCCcccChhhhhccccccccc
Q 037384           26 MVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQS-------SPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQ   98 (190)
Q Consensus        26 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s-------~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~   98 (190)
                      .+|.+++..|.||++|+++++. |+..||++|+++++.       +..|+|  +++....++ +||.++|+.||++|||+
T Consensus         1 i~C~~v~~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~~~~~-~in~~~A~~LP~~Cgv~   76 (91)
T 1siy_A            1 MTCGQVQGNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAAGAVR-GINPNNAEALPGKCGVN   76 (91)
T ss_dssp             CCTTTTHHHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHTTCCS-SCCHHHHHHHHHHHTCC
T ss_pred             CCHHHHHHhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcccccC-CcCHHHHHHHHHHcCCC
Confidence            3699999999999999998875 999999999998642       346888  465555564 69999999999999999


Q ss_pred             cC-CC---CCCCCC
Q 037384           99 TP-PI---SQCKAA  108 (190)
Q Consensus        99 ~p-p~---s~C~~~  108 (190)
                      +| ++   .+|+.+
T Consensus        77 ~p~~is~~~dC~~v   90 (91)
T 1siy_A           77 IPYKISTSTNCNSI   90 (91)
T ss_dssp             CSSCSCTTSCSSTT
T ss_pred             CCCCCCCCCCCccC
Confidence            87 34   378764

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=99.53  E-value=2.8e-16  Score=111.66  Aligned_cols=73  Identities=29%  Similarity=0.608  Sum_probs=61.3

Q ss_pred             CCCCChhhhcCccccHHhhcCC-CCCCChhhhhhhhhhhcCCcccccccccCC-CCCCCcccChhhhhccccccccccCC
Q 037384           24 GQMVCTGALTSLAPCLNYVSGN-SSNPSPSCCSQLRSVVQSSPQCLCSVLNGG-VPSLGITINQTLALSLPRACQVQTPP  101 (190)
Q Consensus        24 A~~~C~~~l~~L~pCl~yvtg~-~~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~-~~slg~~in~trA~~LP~~CgV~~pp  101 (190)
                      ++.+|.+++..|.||++|++++ ...|+..||++||+.   |+.|||.++++. ..++  +||.++|+.||++|||++|+
T Consensus         1 ~~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~---~~~ClC~~~~~~~~~~~--gin~~~A~~LP~~Cgv~~p~   75 (77)
T 2rkn_A            1 AIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA---DFACLCGYKNSPWLGSF--GVDPELASALPKQCGLANAP   75 (77)
T ss_dssp             CCCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTC---CHHHHHTTTTCHHHHHH--TBCHHHHHHHHHHTTCSCCC
T ss_pred             CcchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhc---CcCCcCcccCCcchhhc--CcCHHHHHHHHHHcCCCCCC
Confidence            3578999999999999999973 457999999999983   779999998753 2233  48999999999999999874

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=99.42  E-value=2e-14  Score=100.33  Aligned_cols=64  Identities=27%  Similarity=0.654  Sum_probs=54.5

Q ss_pred             cCccccHHhhcCCCCCCChhhhhhhhhhhcCCcccccccccCCCCCCCcccChhhhhccccccccccCCCCCCC
Q 037384           33 TSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTPPISQCK  106 (190)
Q Consensus        33 ~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~pp~s~C~  106 (190)
                      ..|.||++|++++. .|+..||++||+    +..|||.++++..  ++..||.++|++||++|||++|   +|+
T Consensus         6 ~~L~pC~~~v~~~~-~Ps~~CC~~lk~----~~~ClC~~~k~~~--~~~~in~~~A~~Lp~~Cgv~~P---~C~   69 (69)
T 1l6h_A            6 GQLTVCTGAIAGGA-RPTAACCSSLRA----QQGCFCQFAKDPR--YGRYVNSPNARKAVSSCGIALP---TCH   69 (69)
T ss_dssp             TTHHHHHHHHTTCC-STTHHHHHHHHH----HHHHHHHHTTCSS--HHHHTTTTTGGGCCCCCSSCSC---CCC
T ss_pred             hhcccCHHHHcCCC-CCCHHHHHhhCC----CCCCCCccccCcc--cccccCHHHHHHHHHHcCCCCC---CCC
Confidence            47999999999875 699999999998    3789999998753  4456999999999999999885   574

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=99.40  E-value=2.4e-14  Score=99.42  Aligned_cols=61  Identities=26%  Similarity=0.578  Sum_probs=53.0

Q ss_pred             cCccccHHhhcCCCCCCChhhhhhhhhhhcCCcccccccccCCCCCCCcccChhhhhccccccccccC
Q 037384           33 TSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTP  100 (190)
Q Consensus        33 ~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~p  100 (190)
                      ..|.||++|++++. .|+..||++||+    +..|||.++++..  ++..||.++|++||++|||++|
T Consensus         5 ~~L~pC~~~v~~~~-~Ps~~CC~~lk~----~~~ClC~~~k~~~--~~~~in~~~A~~Lp~~Cgv~~P   65 (67)
T 1n89_A            5 SQLAVCASAILSGA-KPSGECCGNLRA----QQGCFCQYAKDPT--YGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             STTHHHHHHHTTCC-CCCHHHHHHHHH----HSSHHHHGGGCST--THHHHTCHHHHHHHHHHTSCCS
T ss_pred             hhcccCHHHHcCCC-CCCHHHHHhhCC----CCCCCCccccCcc--cccccCHHHHHHHHHHcCCCCC
Confidence            47999999999874 699999999998    3789999998753  4446999999999999999876

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=95.74  E-value=0.0013  Score=46.84  Aligned_cols=72  Identities=28%  Similarity=0.615  Sum_probs=53.9

Q ss_pred             CCCChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhcCC-cccccccccCCCCCCCcccChhhhhc-cccccccccCCC
Q 037384           25 QMVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSS-PQCLCSVLNGGVPSLGITINQTLALS-LPRACQVQTPPI  102 (190)
Q Consensus        25 ~~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s~-~~CLC~~l~~~~~slg~~in~trA~~-LP~~CgV~~pp~  102 (190)
                      +..|-    +|.-|.+-+.|. ..+...||.-++.+++-+ ..|||..++-    +|+ +|....+. |-+.||-..|+.
T Consensus         5 ~~~CP----kLgvCanvL~g~-~~~~~~CC~Ll~GL~dleAAvCLCtaik~----Lgi-lnlpv~L~llln~Cgk~~P~g   74 (80)
T 1hyp_A            5 RPSCP----DLSICLNILGGS-LGTVDDCCALIGGLGDIEAIVCLCIQLRA----LGI-LNLNRNLQLILNSCGRSYPSN   74 (80)
T ss_dssp             -CCSC----CCGGGGGGGGTC-CTTHHHHHHHHHTSCHHHHHHHHHHHHHH----HTC-SCHHHHHHHHHHHTTCSSCCC
T ss_pred             CCCCC----chhHHHHHhCcC-CCCCCccchhhhCcchhhhhhhhhhhccc----cce-eecChhHHHHHHHhCCcCcCC
Confidence            34576    688899888543 236789999999987655 4799998872    565 67666666 457899999999


Q ss_pred             CCCC
Q 037384          103 SQCK  106 (190)
Q Consensus       103 s~C~  106 (190)
                      ++|.
T Consensus        75 F~C~   78 (80)
T 1hyp_A           75 ATCP   78 (80)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9996

>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}

Probab=95.19  E-value=0.00043  Score=62.41  Aligned_cols=52  Identities=21%  Similarity=0.637  Sum_probs=35.7

Q ss_pred             hhhhhhhhhhhcCCcccccccccCCCCC---------CCcccChhhhhccccccccccCCCCCCC
Q 037384           51 PSCCSQLRSVVQSSPQCLCSVLNGGVPS---------LGITINQTLALSLPRACQVQTPPISQCK  106 (190)
Q Consensus        51 ~~CC~~lk~v~~s~~~CLC~~l~~~~~s---------lg~~in~trA~~LP~~CgV~~pp~s~C~  106 (190)
                      ..||++|+.+- .+++|.|..|......         ..-.+ ..+|..||..||+..|  .+|+
T Consensus       429 ~~cc~~l~~~~-~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~p~~c~~~~~--~~c~  489 (500)
T 3ob4_A          429 ERCCNELNEFE-NNQRCMCEALQQIMENQSDRLQGRQQEQQF-KRELRNLPQQCGLRAP--QRCD  489 (500)
T ss_dssp             HHHHHHHGGGT-TCHHHHHHHHHHHHHHHHTTCCSSHHHHHH-HHHHHTHHHHTTCCCC--SCCC
T ss_pred             HHHHHHHHhCC-cccccccHHHHHHHHHHHHHhhhHHHHHHH-HHHHhhCchhcCCCCC--ccCC
Confidence            78999999971 1289999988653211         00122 3459999999999743  4797

>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}

Probab=91.64  E-value=0.039  Score=40.84  Aligned_cols=69  Identities=25%  Similarity=0.588  Sum_probs=45.6

Q ss_pred             CccccHHhhcC----CC--CCC---------ChhhhhhhhhhhcCCcccccccccCCCC------CCC---cccChhhhh
Q 037384           34 SLAPCLNYVSG----NS--SNP---------SPSCCSQLRSVVQSSPQCLCSVLNGGVP------SLG---ITINQTLAL   89 (190)
Q Consensus        34 ~L~pCl~yvtg----~~--~~P---------s~~CC~~lk~v~~s~~~CLC~~l~~~~~------slg---~~in~trA~   89 (190)
                      .|.+|..||.-    ..  ..|         -..||..|+.+   +..|.|..|.....      .++   ..-...+|.
T Consensus        14 ~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~   90 (109)
T 1sm7_A           14 HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAK   90 (109)
T ss_dssp             CCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence            38999999962    11  122         25899999998   88999998864211      111   011234588


Q ss_pred             ccccccccccCCCCCCCC
Q 037384           90 SLPRACQVQTPPISQCKA  107 (190)
Q Consensus        90 ~LP~~CgV~~pp~s~C~~  107 (190)
                      .||..|||..  +..|.-
T Consensus        91 ~LP~~Cnl~~--~~~C~~  106 (109)
T 1sm7_A           91 NLPNVCNMKQ--IGTCPF  106 (109)
T ss_dssp             SHHHHSCCCS--SCSSCC
T ss_pred             hCHHhcCCCC--CCCCCC
Confidence            9999999964  346864

>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3

Probab=90.37  E-value=0.08  Score=36.77  Aligned_cols=55  Identities=24%  Similarity=0.509  Sum_probs=37.9

Q ss_pred             CCChhhhhhhhhhhcCCcccccccccCCCC------CCC---cccChhhhhccccccccccCCCCCCCC
Q 037384           48 NPSPSCCSQLRSVVQSSPQCLCSVLNGGVP------SLG---ITINQTLALSLPRACQVQTPPISQCKA  107 (190)
Q Consensus        48 ~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~------slg---~~in~trA~~LP~~CgV~~pp~s~C~~  107 (190)
                      ..-..||..|+.+   ++.|.|..|.....      .++   ..-...+|..||..||+..+  ..|+-
T Consensus         9 ~~~qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~--~~C~~   72 (75)
T 1pnb_B            9 WLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--GTCPF   72 (75)
T ss_dssp             SCTHHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT--CCCCC
T ss_pred             HHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC--CCCCc
Confidence            3457899999998   79999998764310      111   11125578899999999643  57864

>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}

Probab=89.87  E-value=0.015  Score=43.76  Aligned_cols=76  Identities=25%  Similarity=0.579  Sum_probs=48.8

Q ss_pred             CCChhhh---cCccccHHhhc----CCC-C-CCC-------hhhhhhhhhhhcCCcccccccccCCCCC-------C-Cc
Q 037384           26 MVCTGAL---TSLAPCLNYVS----GNS-S-NPS-------PSCCSQLRSVVQSSPQCLCSVLNGGVPS-------L-GI   81 (190)
Q Consensus        26 ~~C~~~l---~~L~pCl~yvt----g~~-~-~Ps-------~~CC~~lk~v~~s~~~CLC~~l~~~~~s-------l-g~   81 (190)
                      ..|...+   ..|..|..||.    ++. . ...       ..||+.|+.+   ++.|.|..|+..+..       + +-
T Consensus         6 q~C~~q~q~~~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv---~~~CrC~aL~~~v~~~~qq~~~~~~~   82 (114)
T 2lvf_A            6 EECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGE   82 (114)
T ss_dssp             HHHHHHHHHCTHHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHHCCCCSH
T ss_pred             HhhHHHHHHhHhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHC---CcCccCHHHHHHHHHHHHHHhhhhhh
Confidence            3466443   35899999995    221 1 111       3499999998   899999987543211       1 10


Q ss_pred             ---ccChhhhhccccccccccCCCCCCCCC
Q 037384           82 ---TINQTLALSLPRACQVQTPPISQCKAA  108 (190)
Q Consensus        82 ---~in~trA~~LP~~CgV~~pp~s~C~~~  108 (190)
                         .+ ..+|..||..|||.  | ..|.-.
T Consensus        83 ~~~~~-~q~A~~LP~~C~i~--p-~~C~f~  108 (114)
T 2lvf_A           83 QMRRM-MRLAENIPSRCNLS--P-MRCPMG  108 (114)
T ss_dssp             HHHHH-HHHHHHHHHHHCCC--C-SCCTTT
T ss_pred             HHHHH-HHHHHhChHhcCCC--c-ccCCCC
Confidence               11 34689999999996  3 579753

>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2

Probab=89.39  E-value=0.039  Score=42.26  Aligned_cols=67  Identities=25%  Similarity=0.463  Sum_probs=43.0

Q ss_pred             CccccHHhhcCC---CCCC---ChhhhhhhhhhhcCCcccccccccCCCC----CCC---------c------ccChhhh
Q 037384           34 SLAPCLNYVSGN---SSNP---SPSCCSQLRSVVQSSPQCLCSVLNGGVP----SLG---------I------TINQTLA   88 (190)
Q Consensus        34 ~L~pCl~yvtg~---~~~P---s~~CC~~lk~v~~s~~~CLC~~l~~~~~----slg---------~------~in~trA   88 (190)
                      .|..|..||...   ...|   -..||++|+++   +..|-|..|.....    ..|         .      .+-..+|
T Consensus        16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A   92 (124)
T 1hss_A           16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTA   92 (124)
T ss_dssp             CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS---CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHH
T ss_pred             cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHH
Confidence            478899999521   1123   36799999998   78999998653210    000         0      0112258


Q ss_pred             hccccccccccC-CCC
Q 037384           89 LSLPRACQVQTP-PIS  103 (190)
Q Consensus        89 ~~LP~~CgV~~p-p~s  103 (190)
                      ..||..|||.++ +.+
T Consensus        93 ~~LP~~Cnl~~~~~g~  108 (124)
T 1hss_A           93 ASITAVCRLPIVVDAS  108 (124)
T ss_dssp             TTHHHHTTCCEECSTT
T ss_pred             HhchhhcCCCCCCCCC
Confidence            889999999887 443

>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3

Probab=85.87  E-value=0.14  Score=37.58  Aligned_cols=76  Identities=21%  Similarity=0.489  Sum_probs=51.5

Q ss_pred             CCCChhhh--cC-ccccHHhhcCCC------------CCCChhhhhhhhhhhcCCcccccccccCCC-CCC-C--cccCh
Q 037384           25 QMVCTGAL--TS-LAPCLNYVSGNS------------SNPSPSCCSQLRSVVQSSPQCLCSVLNGGV-PSL-G--ITINQ   85 (190)
Q Consensus        25 ~~~C~~~l--~~-L~pCl~yvtg~~------------~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~-~sl-g--~~in~   85 (190)
                      ...|...+  .. |..|..||....            ...-..||..|+.+   ++.|-|..|.... ..+ |  ..-..
T Consensus         8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~~   84 (103)
T 1s6d_A            8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM   84 (103)
T ss_dssp             SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred             CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHHH
Confidence            45687765  35 999999996321            12357899999997   7999999886533 122 1  11124


Q ss_pred             hhhhccccccccccCCCCCCC
Q 037384           86 TLALSLPRACQVQTPPISQCK  106 (190)
Q Consensus        86 trA~~LP~~CgV~~pp~s~C~  106 (190)
                      .+|..||..|||.  |. .|+
T Consensus        85 q~A~~LP~~C~i~--p~-~C~  102 (103)
T 1s6d_A           85 SMAHNLPIECNLM--SQ-PCQ  102 (103)
T ss_dssp             HHHHHHHHHTTSS--SS-CSC
T ss_pred             HHHHhcHHhcCCC--cc-cCC
Confidence            5688999999994  32 475

>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}

Probab=84.25  E-value=0.043  Score=38.05  Aligned_cols=52  Identities=31%  Similarity=0.645  Sum_probs=36.2

Q ss_pred             hhhhhhhhhhhcCCcccccccccCCCC------C-CC---cccChhhhhccccccccccCCCCCCCC
Q 037384           51 PSCCSQLRSVVQSSPQCLCSVLNGGVP------S-LG---ITINQTLALSLPRACQVQTPPISQCKA  107 (190)
Q Consensus        51 ~~CC~~lk~v~~s~~~CLC~~l~~~~~------s-lg---~~in~trA~~LP~~CgV~~pp~s~C~~  107 (190)
                      ..||..|+.+   ++.|.|..|+....      . ++   +.-...+|..||..||+..+  ..|+-
T Consensus         8 qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~--~~C~~   69 (72)
T 2ds2_B            8 RQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI--GACPF   69 (72)
T ss_dssp             HHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTC--CCCCC
T ss_pred             HHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCC--CcCCC
Confidence            5799999997   89999998865321      1 11   11235678899999999533  46763

>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A

Probab=80.67  E-value=0.46  Score=36.34  Aligned_cols=72  Identities=26%  Similarity=0.555  Sum_probs=45.9

Q ss_pred             CccccHHhhcC----C-CCCC----ChhhhhhhhhhhcCCcccccccccCCC----C-----CC-Cc--cc-------Ch
Q 037384           34 SLAPCLNYVSG----N-SSNP----SPSCCSQLRSVVQSSPQCLCSVLNGGV----P-----SL-GI--TI-------NQ   85 (190)
Q Consensus        34 ~L~pCl~yvtg----~-~~~P----s~~CC~~lk~v~~s~~~CLC~~l~~~~----~-----sl-g~--~i-------n~   85 (190)
                      .|..|.+||..    . ...|    -..||++|+++   +..|-|..|....    .     .. |.  .+       -.
T Consensus        16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~   92 (127)
T 1bea_A           16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI---PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQR   92 (127)
T ss_dssp             CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHH
T ss_pred             cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc---CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHH
Confidence            48899999952    1 1123    34699999998   7999999764211    0     01 11  11       13


Q ss_pred             hhhhcc--ccccccccCCCC-CCCCC
Q 037384           86 TLALSL--PRACQVQTPPIS-QCKAA  108 (190)
Q Consensus        86 trA~~L--P~~CgV~~pp~s-~C~~~  108 (190)
                      .+|..|  |..||+.+++.+ .|...
T Consensus        93 ~~A~~Lv~P~~Cnl~~~~g~~~C~~~  118 (127)
T 1bea_A           93 GFAATLVTEAECNLATISGVAECPWI  118 (127)
T ss_dssp             HHHTTTTSTTTTCCCCTTSSSCCTTT
T ss_pred             HHHHhcCCcccCCCCCCCCCCCCCcc
Confidence            358889  999999887433 67653

>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B

Probab=80.16  E-value=0.29  Score=37.18  Aligned_cols=70  Identities=24%  Similarity=0.427  Sum_probs=44.7

Q ss_pred             CccccHHhhcCC-----CCCC----ChhhhhhhhhhhcCCcccccccccCCCC------------CCCcc------cChh
Q 037384           34 SLAPCLNYVSGN-----SSNP----SPSCCSQLRSVVQSSPQCLCSVLNGGVP------------SLGIT------INQT   86 (190)
Q Consensus        34 ~L~pCl~yvtg~-----~~~P----s~~CC~~lk~v~~s~~~CLC~~l~~~~~------------slg~~------in~t   86 (190)
                      .|..|.+||...     ...|    -..||++|+++   ++.|-|..|.....            .++..      .-..
T Consensus        16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i---~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~   92 (122)
T 1b1u_A           16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRA   92 (122)
T ss_dssp             TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS---CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHH
T ss_pred             cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC---CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHH
Confidence            588999999522     1123    35799999998   78999997643210            01110      1113


Q ss_pred             hhhcc--ccccccccCCCC-CCC
Q 037384           87 LALSL--PRACQVQTPPIS-QCK  106 (190)
Q Consensus        87 rA~~L--P~~CgV~~pp~s-~C~  106 (190)
                      +|..|  |..||+.+++.+ -|.
T Consensus        93 ~A~~Lv~P~~Cnl~~~~g~~~C~  115 (122)
T 1b1u_A           93 FAPKLVTEVECNLATIHGGPFCL  115 (122)
T ss_dssp             HGGGTTSTTTTCCCCTTSSSCCS
T ss_pred             HHHhcCCcccCCCCCCCCCcccc
Confidence            58889  999999887432 453

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	190
d1fk5a_	93	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	4e-15
d1mida_	91	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	5e-14

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]} Length = 93

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

 Score = 65.7 bits (160), Expect = 4e-15
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSS-----PQCLCSVLNGGVPSLGIT 82
           C    +++APC++Y  G  S PS  CCS +RS+  ++      +  C+ L          
Sbjct: 4   CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG-VSG 62

Query: 83  INQTLALSLPRACQVQTP-PIS 103
           +N   A S+P  C V  P  IS
Sbjct: 63  LNAGNAASIPSKCGVSIPYTIS 84

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 91

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 62.5 bits (152), Expect = 5e-14
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 28  CTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSS-----PQCLCSVLNGGVPSLGIT 82
           C    + + PCL YV G    PS  CC+ +R +   +      Q +C+ L G        
Sbjct: 3   CGQVDSKMKPCLTYVQGGPG-PSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARG-IHN 60

Query: 83  INQTLALSLPRACQVQTP-PIS 103
           +N   A S+P  C V  P  IS
Sbjct: 61  LNLNNAASIPSKCNVNVPYTIS 82

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	190
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.69
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.65
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	98.97
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	98.92
g1pnb.1	106	Napin BNIb {Rape (Brassica napus) [TaxId: 3708]}	95.04
d1s6da_	103	Methionine-rich 2S protein (albumin 8) {Common sun	92.02
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	91.85
d1psya_	125	2S albumin RicC3 {Castor bean (Ricinus communis) [	90.7
d1tmqb_	117	Trypsin/alpha-amylase inhibitor RBI {Eleusine cora	82.4

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.69  E-value=3.4e-19  Score=129.59  Aligned_cols=82  Identities=29%  Similarity=0.690  Sum_probs=69.5

Q ss_pred             CCChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhc-----CCcccccccccCCCCCCCcccChhhhhccccccccccC
Q 037384           26 MVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQ-----SSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTP  100 (190)
Q Consensus        26 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~-----s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~p  100 (190)
                      .+|.+++..|.||++|++|+...|++.||++++++++     .+++|+|++|++....+ ..||.+|+.+||++|||+++
T Consensus         2 i~C~~v~~~l~pCl~Yltg~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~-~~in~~ra~~LP~~C~v~l~   80 (93)
T d1fk5a_           2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGV-SGLNAGNAASIPSKCGVSIP   80 (93)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTC-TTCCHHHHHHHHHHTTCCCS
T ss_pred             CCHHHHHHHhhhhHHHHhCCCCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhccccc-CCcCHHHHHhhhHhcCCCCC
Confidence            6899999999999999999887899999999999864     36789999998754332 46899999999999999987


Q ss_pred             ----CCCCCCCC
Q 037384          101 ----PISQCKAA  108 (190)
Q Consensus       101 ----p~s~C~~~  108 (190)
                          +..+|+.+
T Consensus        81 ~pis~~~dCs~i   92 (93)
T d1fk5a_          81 YTISTSTDCSRV   92 (93)
T ss_dssp             SCCSTTCCGGGC
T ss_pred             CCCCCCCCCCcC
Confidence                34478765

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.65  E-value=2.1e-18  Score=125.01  Aligned_cols=81  Identities=32%  Similarity=0.711  Sum_probs=68.0

Q ss_pred             CCChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhc-----CCcccccccccCCCCCCCcccChhhhhccccccccccC
Q 037384           26 MVCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQ-----SSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTP  100 (190)
Q Consensus        26 ~~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~-----s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~p  100 (190)
                      .+|.+++..|.||++|++|+. .|++.||++++++++     .+++|+|++|++.+..+ ..||.+||.+||++|||++|
T Consensus         1 i~C~~v~~~l~pCl~Yl~g~~-~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~-~~in~~ra~~LP~~C~v~~p   78 (91)
T d1mida_           1 LNCGQVDSKMKPCLTYVQGGP-GPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGI-HNLNLNNAASIPSKCNVNVP   78 (91)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTC-TTCCHHHHHHHHHHTTCCCC
T ss_pred             CCHHHHHHHHHhhHHHHcCCC-CCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcccC-CCcCHHHHHhchHhcCCCCC
Confidence            479999999999999999874 799999999999864     25789999999764333 36899999999999999998


Q ss_pred             -CCC---CCCCC
Q 037384          101 -PIS---QCKAA  108 (190)
Q Consensus       101 -p~s---~C~~~  108 (190)
                       |++   +|+++
T Consensus        79 ~pis~~~dC~~i   90 (91)
T d1mida_          79 YTISPDIDCSRI   90 (91)
T ss_dssp             SCCCTTCCGGGC
T ss_pred             CCCCCCCCCCCC
Confidence             554   78764

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=98.97  E-value=4.8e-11  Score=81.67  Aligned_cols=65  Identities=26%  Similarity=0.629  Sum_probs=56.3

Q ss_pred             CChhhhcCccccHHhhcCCCCCCChhhhhhhhhhhcCCcccccccccCCCCCCCcccChhhhhccccccccccC
Q 037384           27 VCTGALTSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTP  100 (190)
Q Consensus        27 ~C~~~l~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~p  100 (190)
                      .|+.  ..|.+|++.|+++. .|+..||+.||+    |..|||+++++..  ++..||..+|.++-..|||.+|
T Consensus         2 ~C~p--~~L~~C~~ai~~g~-~PS~~CC~kLke----Q~~ClC~Y~k~P~--~~~yv~spnarkv~~aCgvp~P   66 (69)
T d1l6ha_           2 GCNA--GQLTVCTGAIAGGA-RPTAACCSSLRA----QQGCFCQFAKDPR--YGRYVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             CSTT--TTHHHHHHHHTTCC-STTHHHHHHHHH----HHHHHHHHTTCSS--HHHHTTTTTGGGCCCCCSSCSC
T ss_pred             CCCh--hhccccHHHHhCCC-CCcHHHHHHHHh----cCCccceeccCcc--HHHHcCCHHHHHHHHhcCCCCC
Confidence            3665  37999999999876 699999999999    6789999999874  5567899999999999999887

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=98.92  E-value=6.3e-11  Score=80.65  Aligned_cols=61  Identities=26%  Similarity=0.578  Sum_probs=54.2

Q ss_pred             cCccccHHhhcCCCCCCChhhhhhhhhhhcCCcccccccccCCCCCCCcccChhhhhccccccccccC
Q 037384           33 TSLAPCLNYVSGNSSNPSPSCCSQLRSVVQSSPQCLCSVLNGGVPSLGITINQTLALSLPRACQVQTP  100 (190)
Q Consensus        33 ~~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~slg~~in~trA~~LP~~CgV~~p  100 (190)
                      ..|.+|++.|+++. .|+..||+.||+    |..|||+++++..  +...||..+|.++-+.|||.+|
T Consensus         5 ~~L~~C~~Ai~~g~-~PS~~CC~kLke----Q~~ClC~Y~kdP~--~~~yv~spnarkv~~aCgvp~P   65 (67)
T d1tuka1           5 SQLAVCASAILSGA-KPSGECCGNLRA----QQGCFCQYAKDPT--YGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             GGGGGGHHHHHHCC-CCCHHHHHHHHH----HGGGHHHHTTCTT--THHHHTSHHHHHHHHHTTCCCC
T ss_pred             hhccccHHHHhcCC-CCcHHHHHHHHh----cCCccceecCCcc--HHHHcCCHHHHHHHHhcCCCCC
Confidence            47999999999876 799999999999    6789999999874  6567899999999999999886

>d1s6da_ a.52.1.3 (A:) Methionine-rich 2S protein (albumin 8) {Common sunflower (Helianthus annuus) [TaxId: 4232]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: Methionine-rich 2S protein (albumin 8)
species: Common sunflower (Helianthus annuus) [TaxId: 4232]

Probab=92.02  E-value=0.014  Score=41.62  Aligned_cols=72  Identities=19%  Similarity=0.453  Sum_probs=49.2

Q ss_pred             CCCCChhhh---cCccccHHhhcC-----CCC-------CCChhhhhhhhhhhcCCcccccccccCCCCC-C--C-cccC
Q 037384           24 GQMVCTGAL---TSLAPCLNYVSG-----NSS-------NPSPSCCSQLRSVVQSSPQCLCSVLNGGVPS-L--G-ITIN   84 (190)
Q Consensus        24 A~~~C~~~l---~~L~pCl~yvtg-----~~~-------~Ps~~CC~~lk~v~~s~~~CLC~~l~~~~~s-l--g-~~in   84 (190)
                      .+..|...+   ..|..|..||..     +..       .-=..||+.|+.+   ++.|.|..|...... .  + +.--
T Consensus         7 ~~q~C~~q~q~qq~L~~Cq~Yl~q~~~~~~~~~~~~~~e~~~~~CC~qL~q~---~~~CrC~~L~~avq~q~~q~~~~~~   83 (103)
T d1s6da_           7 TESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQV   83 (103)
T ss_dssp             CSSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHH
T ss_pred             ccccCHHHHHHhHhHHHHHHHHHHHHhccCCCCCccCchHHHHHHHHHHHcC---CCCCcCHHHHHHHHHHHhHHHHHHH
Confidence            356787544   479999999952     111       1236899999998   999999987654321 1  1 1112


Q ss_pred             hhhhhccccccccc
Q 037384           85 QTLALSLPRACQVQ   98 (190)
Q Consensus        85 ~trA~~LP~~CgV~   98 (190)
                      ...|..||..||+.
T Consensus        84 ~q~Ak~LPs~C~i~   97 (103)
T d1s6da_          84 MSMAHNLPIECNLM   97 (103)
T ss_dssp             HHHHHHHHHHTTSS
T ss_pred             HHHHHhChHhcCCC
Confidence            45689999999996

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=91.85  E-value=0.012  Score=39.71  Aligned_cols=68  Identities=25%  Similarity=0.512  Sum_probs=48.1

Q ss_pred             CccccHHhhcCCCCCCChhhhhhhhhhhcCC-cccccccccCCCCCCCcccChhhhhc-cccccccccCCCCCCCC
Q 037384           34 SLAPCLNYVSGNSSNPSPSCCSQLRSVVQSS-PQCLCSVLNGGVPSLGITINQTLALS-LPRACQVQTPPISQCKA  107 (190)
Q Consensus        34 ~L~pCl~yvtg~~~~Ps~~CC~~lk~v~~s~-~~CLC~~l~~~~~slg~~in~trA~~-LP~~CgV~~pp~s~C~~  107 (190)
                      +|.-|.+-+.+.. .+...||.-++.+++-+ ..|||-.++...    + +|....+. |-..||-..|+.++|..
T Consensus         5 Klg~C~nvLg~~~-~~~~~CC~Ll~GL~dleAAvCLCtaika~~----l-lnvpv~l~llln~Cgk~~P~gF~CP~   74 (75)
T d1hypa_           5 DLSICLNILGGSL-GTVDDCCALIGGLGDIEAIVCLCIQLRALG----I-LNLNRNLQLILNSCGRSYPSNATCPR   74 (75)
T ss_dssp             CCGGGGGGGGTCC-TTHHHHHHHHHTSCHHHHHHHHHHHHHHHT----C-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred             chhhHHHHhcCcc-CCCCCcchHHhhHHHHHHHHHHHHHHHHhh----h-ccccchHHHHHHHcCCcCcCCCcCCC
Confidence            4666777776543 46688999999987655 469999988522    2 44444444 44689999999999964

>d1psya_ a.52.1.3 (A:) 2S albumin RicC3 {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: 2S albumin RicC3
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=90.70  E-value=0.0053  Score=45.22  Aligned_cols=71  Identities=24%  Similarity=0.541  Sum_probs=47.9

Q ss_pred             CCCChhhh--cCccccHHhhcCCCC-----CC-----C-----------hhhhhhhhhhhcCCcccccccccCCCCC---
Q 037384           25 QMVCTGAL--TSLAPCLNYVSGNSS-----NP-----S-----------PSCCSQLRSVVQSSPQCLCSVLNGGVPS---   78 (190)
Q Consensus        25 ~~~C~~~l--~~L~pCl~yvtg~~~-----~P-----s-----------~~CC~~lk~v~~s~~~CLC~~l~~~~~s---   78 (190)
                      ...|...+  ..|..|..||.-...     .+     .           ..||..|+.+   ++.|.|..|......   
T Consensus        15 ~q~Crqe~q~q~L~sCq~Yl~qq~~~~~~~~~~~~~~~~~~~~~e~~~l~qCC~qL~q~---~~~CrC~~l~~~v~~~~q   91 (125)
T d1psya_          15 SQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQ   91 (125)
T ss_dssp             SSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHH
T ss_pred             cccCHHHHHhhhHHHHHHHHHHHHhccCCCCcccccccccccccccHHHHHHHHHHHhC---CcCCcCHHHHHHHHHHHH
Confidence            45687653  479999999963210     01     0           3699999998   899999987643211   


Q ss_pred             ---C-Cc---ccChhhhhcccccccccc
Q 037384           79 ---L-GI---TINQTLALSLPRACQVQT   99 (190)
Q Consensus        79 ---l-g~---~in~trA~~LP~~CgV~~   99 (190)
                         + +-   .+ ..+|..||..||+..
T Consensus        92 q~~~~~~~~~~~-~q~Ak~LPs~C~i~~  118 (125)
T d1psya_          92 QGQLHGEESERV-AQRAGEIVSSCGVRC  118 (125)
T ss_dssp             HTTCCTTCSHHH-HHHHHHHHHHHTCST
T ss_pred             HHHHHHHHHHHH-HHHHHhChhhcCCcc
Confidence               1 11   11 457999999999964

>d1tmqb_ a.52.1.2 (B:) Trypsin/alpha-amylase inhibitor RBI {Eleusine coracana, seeds [TaxId: 4511]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Proteinase/alpha-amylase inhibitors
domain: Trypsin/alpha-amylase inhibitor RBI
species: Eleusine coracana, seeds [TaxId: 4511]

Probab=82.40  E-value=0.054  Score=39.24  Aligned_cols=37  Identities=32%  Similarity=0.739  Sum_probs=26.8

Q ss_pred             CccccHHhhc----CCC-CCC----ChhhhhhhhhhhcCCccccccccc
Q 037384           34 SLAPCLNYVS----GNS-SNP----SPSCCSQLRSVVQSSPQCLCSVLN   73 (190)
Q Consensus        34 ~L~pCl~yvt----g~~-~~P----s~~CC~~lk~v~~s~~~CLC~~l~   73 (190)
                      -|..|.+||.    |.. ..+    -..||++|.++   +..|-|..|.
T Consensus        16 pL~~CR~Yv~~q~~g~g~~~~~~~~~~~CC~qL~~i---~~~CRC~ALr   61 (117)
T d1tmqb_          16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVR   61 (117)
T ss_dssp             TTTTHHHHHHHHHHSCSCSSCHHHHHHHHHHHHHTS---CHHHHHHHHH
T ss_pred             ccHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHhC---CcccchHHHH
Confidence            3888999995    222 122    24599999998   7789998764