Citrus Sinensis ID: 037413

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530
MADTENTPGNSMHGVSAKEKAFAFSVASPIMPTDPIAKFKLPVDSEHKAKVFKIFSLASPHMTTFHLSWLSFFTCFVSTFAAAPLVPIIRDNLNLIKTDIGNAGIASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFSMVFVSSARGYIAARFMIGFSLATFVSCQYWMSTMFNGKIIGLVNGTAAGWGNMGGGITQLLTPFIYELIRRAGATPFTAWRIAFFAPGCLHVIMGILVLTLGQDLPDGNLNTLQKKGDVPTDKFPKVLWYAITNYRTWIFVLLYGMSLGIELTIDNVIAEYFFDRFNLKLHTAGVIAATFGMANIFARPLGGLMSDMAARPFGMRGRLWNLYIVQTLGGIFCICLGRASTLPLSILSMILFSITTQAACGATFGIIPFISRRSLGVISGLTGAGGNFGSGLTQLLFFTSSRHSTATGISLMGIMIVCCTFPVALVHFPQWGSMFLPATKDSEKSKEEYYYGAEWNEEEKQRGLHHGSLKFAENSRSERGKRVGSDPTPISATPAPV
ccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHcccccHHHHHccccccHHHHHHHHHccccccccccccccccccccc
************************************AKFKLPVDSEHKAKVFKIFSLASPHMTTFHLSWLSFFTCFVSTFAAAPLVPIIRDNLNLIKTDIGNAGIASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFSMVFVSSARGYIAARFMIGFSLATFVSCQYWMSTMFNGKIIGLVNGTAAGWGNMGGGITQLLTPFIYELIRRAGATPFTAWRIAFFAPGCLHVIMGILVLTLGQDLPDGNLNTLQKKGDVPTDKFPKVLWYAITNYRTWIFVLLYGMSLGIELTIDNVIAEYFFDRFNLKLHTAGVIAATFGMANIFARPLGGLMSDMAARPFGMRGRLWNLYIVQTLGGIFCICLGRASTLPLSILSMILFSITTQAACGATFGIIPFISRRSLGVISGLTGAGGNFGSGLTQLLFFTSSRHSTATGISLMGIMIVCCTFPVALVHFPQWGSMFLPA**********YYYGA********************************************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MADTENTPGNSMHGVSAKEKAFAFSVASPIMPTDPIAKFKLPVDSEHKAKVFKIFSLASPHMTTFHLSWLSFFTCFVSTFAAAPLVPIIRDNLNLIKTDIGNAGIASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFSMVFVSSARGYIAARFMIGFSLATFVSCQYWMSTMFNGKIIGLVNGTAAGWGNMGGGITQLLTPFIYELIRRAGATPFTAWRIAFFAPGCLHVIMGILVLTLGQDLPDGNLNTLQKKGDVPTDKFPKVLWYAITNYRTWIFVLLYGMSLGIELTIDNVIAEYFFDRFNLKLHTAGVIAATFGMANIFARPLGGLMSDMAARPFGMRGRLWNLYIVQTLGGIFCICLGRASTLPLSILSMILFSITTQAACGATFGIIPFISRRSLGVISGLTGAGGNFGSGLTQLLFFTSSRHSTATGISLMGIMIVCCTFPVALVHFPQWGSMFLPATKDSEKSKEEYYYGAEWNEEEKQRGLHHGSLKFAENSRSERGKRVGSDPTPISATPAPV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
High affinity nitrate transporter 2.4 Involved in high-affinity nitrate transport. Might be involved in the transfer of nitrate from stored pools to cytoplasm.confidentQ9FJH8
High affinity nitrate transporter 2.3 Involved in high-affinity nitrate transport. Acts as a dual component transporter with NTR3.1.probableQ9FJH7
High-affinity nitrate transporter 2.1 Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NTR3.1. Acts as a repressor of lateral root initiation under high sucrose/low nitrate conditions.probableO82811

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1PW4, chain A
Confidence level:very confident
Coverage over the Query: 60-455
View the alignment between query and template
View the model in PyMOL