Citrus Sinensis ID: 037433

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
Protein Sequence
MDSSQKQVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPSASNPGNPPDYNVPRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAEEAGLDLELRLGRNR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccEEEcccccccccccHHHHHHHHHHccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHccccccccccccEEEEEEEccccccHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccc
Coil and Loop (DISEMBL)
mdssqkqvgsdhsssdenevkeldtssakrsyectfckrgftnaqalgghmnihrkdrakakqttgpsfitsnpmlthedymnpryiapissdtsrhspvfesqrnylryyqpsasnpgnppdynvprseslsmmneDQLLGANlslgigpscvgednevmrrGTAEEAGLDLELRLGRNR
Flexible Loop (DISEMBL)
mdssqkqvgsdhsssdenevkeldtssakrsYECTFCKRGFTNAQALGGHMNIHRKDrakakqttgpsfitsnpmltHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYqpsasnpgnppDYNVPRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRgtaeeagldlelrlgrnr
Low Complexity Region (SEG)
MDSSQKQVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPSASNPGNPPDYNVPRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAEEAGLDLELRLGRNR
Disordered region (IsUnstruct)
*******************************YECTFCKRGFTNAQALGGHM*********************************************************************************************LSLGI********************************
Disordered Region (DISOPRED)
***S***************************YECTFCKRGFTNAQALGGHMNIHRKDR********************************************************************************************************************LRLG***
Disordered Region (DISEMBL)
****************************KRSYECTFCKRGFTNAQALGGHMNIH**********TGPSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPSASNPGNPPDYNVPRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAEEAGLDLELRLGRNR
Disordered Region (DISPRO)
****************************KRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT******************NPRYIAPISSDTSRHSPVFESQRNYLRYYQPSASNPGNPPDYNVPRSESLSMMNEDQLLGANLSLGIGPSC****************GLDL********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDSSQKQVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPSASNPGNPPDYNVPRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAEEAGLDLELRLGRNR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	181	2.2.26 [Sep-21-2011]
Q9SR34	172	Transcriptional regulator	yes	no	0.220	0.232	0.7	2e-11
Q9LHS9	226	Probable transcriptional	no	no	0.198	0.159	0.666	4e-09
Q38895	204	Transcriptional regulator	no	no	0.287	0.254	0.5	5e-09
Q9FFX4	161	Zinc finger protein KNUCK	no	no	0.624	0.701	0.294	1e-05
Q39262	235	Zinc finger protein 3 OS=	no	no	0.243	0.187	0.431	1e-05
Q39265	197	Zinc finger protein 6 OS=	no	no	0.220	0.203	0.5	2e-05
Q39263	260	Zinc finger protein 4 OS=	no	no	0.215	0.15	0.461	3e-05
Q39266	209	Zinc finger protein 7 OS=	no	no	0.298	0.258	0.409	0.0001
Q9LG97	263	Zinc finger protein STAME	no	no	0.171	0.117	0.580	0.0002
Q42485	228	Zinc finger protein 1 OS=	no	no	0.187	0.149	0.470	0.0003

>sp|Q9SR34|TAC1_ARATH Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/40 (70%), Positives = 34/40 (85%)

Query: 24 DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ 63
          D+ +  RSY C+FC RGF+NAQALGGHMNIHR+DRAK +Q
Sbjct: 27 DSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQ 66

Activation factor which mediates telomerase activity and potentiates responses to auxin through the regulation of BT2. Binds in vitro to the DNA sequence 5'-GACAGTGTTAC-3' of the BT2 promoter.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 30/36 (83%)

Query: 30 RSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT 65
          RSY C+FC R F +AQALGGHMN+HR+DRA+ KQ +
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQS 88

Probable transcriptional regulator essential for petal development. Required for the early development of the organ primordia of the second whorl. Acts downstream of AP1 and PTL.

Arabidopsis thaliana (taxid: 3702)

>sp|Q38895|SUP_ARATH Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 36/52 (69%)

Query: 11 DHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK 62
          D+ +  ++    L  S   RSY C+FCKR F +AQALGGHMN+HR+DRA+ +
Sbjct: 26 DYDNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 77

Probable transcriptional regulator considered as cadastral protein that acts indirectly to prevent the B class homeotic proteins APETALA3 and perhaps PISTILLATA from acting in the gynoecial whorl. Principal function is to balance cell proliferation in the third and fourth whorls of developing flowers thereby maintaining the boundary between stamens and carpels. May fulfill this role by repressing genes implicated in cell division. Plays equally a role in the determinacy of the floral meristem. Is also required for normal ovule development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 26/139 (18%)

Query: 27  SAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHED-YMNPR 85
           ++ R + C +C R F  +QALGGH N H+++RA A++  G     S P+L   + ++ P 
Sbjct: 33  ASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNLG-VLANSPPILDDNNTFLRPY 91

Query: 86  ---YIAPISSDTSRHSPVFESQRNYLRYYQPS-----ASNPGNPPDYNVPRSES------ 131
              Y  P    TS + P+ E         QP+       +P +P  Y  P + S      
Sbjct: 92  PCFYQNPFQGSTSGNEPLQE---------QPTMMTMDGYDPFHPYPYVYPFALSGNNNDG 142

Query: 132 -LSMMNEDQLLGANLSLGI 149
              +M ED+ L  +LSL +
Sbjct: 143 GNGVMEEDEPLDLDLSLRL 161

May function as a transcriptional repressor of cellular proliferation that regulates floral determinacy and relative size of basal pattern elements along the proximo-distal axis of the developing gynoecium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 31/44 (70%)

Query: 20 VKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ 63
          V E  TS+ ++ + C +C+R F ++QALGGH N H+++R  AK+
Sbjct: 49 VNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR 92

Arabidopsis thaliana (taxid: 3702)

>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 26/40 (65%)

Query: 25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT 64
          + S  R YEC +C R F N+QALGGH N H+K+R   K+ 
Sbjct: 34 SGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRA 73

Arabidopsis thaliana (taxid: 3702)

>sp|Q39263|ZFP4_ARATH Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2

 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 28/39 (71%)

Query: 26  SSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT 64
           S +KR + C +C+R F ++QALGGH N H+++R  AK+ 
Sbjct: 79  SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRA 117

Arabidopsis thaliana (taxid: 3702)

>sp|Q39266|ZFP7_ARATH Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1

 Score = 46.6 bits (109), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 7/61 (11%)

Query: 10 SDHSSSDE--NEVKELDTSSAK-----RSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK 62
          S+H S D   N+    DT S K     R + C +C+R F ++QALGGH N H+++R  AK
Sbjct: 30 SNHVSLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 89

Query: 63 Q 63
          +
Sbjct: 90 R 90

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LG97|SL1_ORYSJ Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica GN=SL1 PE=2 SV=1

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)

Query: 28 AKRSYECTFCKRGFTNAQALGGHMNIHRKDR 58
          A + YEC FC   F  +QALGGHMN HR++R
Sbjct: 54 AGKVYECRFCSLKFCKSQALGGHMNRHRQER 84

Regulates floral organ identity and cell proliferation in the inner floral whorls. Probably specifies the identities of lodicule and stamen through positive regulation of MADS16 expression. May contribute to morphogenesis by suppressing OSH1 expression in the lateral organs.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q42485|ZFP1_ARATH Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 30 RSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ 63
          R + C +C+R F ++QALGGH N H+++R  AK+
Sbjct: 66 RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
224111020	192	predicted protein [Populus trichocarpa]	0.961	0.906	0.479	1e-32
255576862	194	Transcriptional regulator SUPERMAN, puta	0.966	0.902	0.453	9e-31
225432987	178	PREDICTED: probable transcriptional regu	0.895	0.910	0.497	3e-30
224099901	193	predicted protein [Populus trichocarpa]	0.961	0.901	0.465	5e-30
147771488	275	hypothetical protein VITISV_004877 [Viti	0.895	0.589	0.491	8e-30
315661271	191	transcriptional regulator superman [Malu	0.889	0.842	0.494	1e-29
315661269	189	transcriptional regulator superman [Malu	0.867	0.830	0.475	2e-28
359480004	175	PREDICTED: transcriptional regulator SUP	0.773	0.8	0.450	3e-20
224066277	184	predicted protein [Populus trichocarpa]	0.950	0.934	0.392	4e-19
449433269	169	PREDICTED: uncharacterized protein LOC10	0.812	0.869	0.423	5e-17

>gi|224111020|ref|XP_002315718.1| predicted protein [Populus trichocarpa] gi|222864758|gb|EEF01889.1| predicted protein [Populus trichocarpa]

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/194 (47%), Positives = 120/194 (61%), Gaps = 20/194 (10%)

Query: 4   SQKQVGSDHSSSDEN-----EVKELDTS----SAKRSYECTFCKRGFTNAQALGGHMNIH 54
           S KQ  S  SS+DEN     +VKE  +S    SAKRSYEC+FCKRGFTNAQALGGHMNIH
Sbjct: 3   SAKQQSSGTSSTDENYDRQEQVKEDSSSRTTISAKRSYECSFCKRGFTNAQALGGHMNIH 62

Query: 55  RKDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPS 114
           RKDRA   +    +  +S      E+  NP Y+ P SS+ +++ PV E QRNY  Y+Q  
Sbjct: 63  RKDRANRTKDKQLASSSSVSSKASEEIKNPGYMVPNSSEPTKYYPVSEDQRNYGTYFQQP 122

Query: 115 ASNPGNP-------PDYNVPRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAE 167
            S+P  P        D+ VPRS+SLSM   D+L G ++ L IG S + +DN   RR  ++
Sbjct: 123 GSSPREPYSYKHGSHDFLVPRSQSLSM--NDELWGTSIGLQIGSSNI-QDNGGNRR-VSD 178

Query: 168 EAGLDLELRLGRNR 181
           +  +DLELRLG +R
Sbjct: 179 DDEVDLELRLGHDR 192

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576862|ref|XP_002529317.1| Transcriptional regulator SUPERMAN, putative [Ricinus communis] gi|223531241|gb|EEF33086.1| Transcriptional regulator SUPERMAN, putative [Ricinus communis]

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 19/194 (9%)

Query: 4   SQKQVGSDHSS--SDENEVKE----LDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKD 57
           S+ Q  SD SS  +D  +VKE    + T++AKRSYEC+FCKRGFTNAQALGGHMNIHR+D
Sbjct: 3   SRIQACSDTSSEENDRQQVKEDATTITTNTAKRSYECSFCKRGFTNAQALGGHMNIHRRD 62

Query: 58  RAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPS-AS 116
           RAK  +    S  +S    T+E++  P YI  ISS+   +  V ESQ+NY  Y+QPS +S
Sbjct: 63  RAKTAKQVMSSSSSSISSKTNEEHTKPNYIGSISSEPMNYYQVLESQKNYPMYFQPSGSS 122

Query: 117 NPGNPP---------DYNVPRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAE 167
           +P   P         D+ VPR+   S+  +++  GANLSL +G + + ++   M    A+
Sbjct: 123 SPRQVPQVYYNYGSDDFLVPRNNK-SLSRDEECWGANLSLQLGSNHLQDNG--MNMEVAK 179

Query: 168 EAGLDLELRLGRNR 181
           E  +DLELRLG +R
Sbjct: 180 EDEVDLELRLGHDR 193

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432987|ref|XP_002280778.1| PREDICTED: probable transcriptional regulator RABBIT EARS-like [Vitis vinifera]

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/177 (49%), Positives = 109/177 (61%), Gaps = 15/177 (8%)

Query: 9   GSDHSSSDENEVKEL--DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTG 66
           G   +SS+EN+  E        +RSYECT+CKRGFTNAQALGGHMNIHRKDRAK KQ TG
Sbjct: 7   GGSETSSEENDRPEKVKGERGGRRSYECTYCKRGFTNAQALGGHMNIHRKDRAKTKQVTG 66

Query: 67  PSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPSASNPGNPPDYN- 125
            S  +S P   +E+YM  +  AP SS  +R+    E+QRNY  Y+ PS S+   P  Y+ 
Sbjct: 67  SS-GSSKP---NEEYMAYKDFAPFSSQPARYYESCEAQRNYPTYFPPSDSSSRYPHAYHE 122

Query: 126 ----VPRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAEEAGLDLELRLG 178
                P SE LS    +Q LGANLSL IGP+  G+     + G  +E  +DLELRLG
Sbjct: 123 NNWSAPNSERLSF--NEQRLGANLSLQIGPTYRGDSGIERQYGKDDE--VDLELRLG 175

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099901|ref|XP_002311667.1| predicted protein [Populus trichocarpa] gi|222851487|gb|EEE89034.1| predicted protein [Populus trichocarpa]

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 26/200 (13%)

Query: 1   MDSSQKQVGSDHSSSDEN-----EVKELDTSS-----AKRSYECTFCKRGFTNAQALGGH 50
           M+S+++  GS  +SS+EN     +VKE D SS     AKRSYEC+FCKRGFTNAQALGGH
Sbjct: 1   MESAKQ--GSPEASSEENYDSQEQVKE-DLSSNTATTAKRSYECSFCKRGFTNAQALGGH 57

Query: 51  MNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRY 110
           MNIHRKDRA   +    +  +S     +E+  NPRY+ P SS  + + P  E+QRN+  Y
Sbjct: 58  MNIHRKDRANRTRGKNLASSSSVSSKANEEIKNPRYMVPNSSIPTNYYPFLEAQRNHEMY 117

Query: 111 YQPSA-SNPGNP--------PDYNVPRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVM 161
           +QP A S+P  P         D+  PRS+SLSM   ++L G  LSL IG + + +D+   
Sbjct: 118 FQPPAGSSPRQPYSNYKHGSQDFLGPRSQSLSM--NEELWGKGLSLQIGSANI-QDSGGN 174

Query: 162 RRGTAEEAGLDLELRLGRNR 181
           RR  +++  +DLELRLGR+R
Sbjct: 175 RR-VSDDDEVDLELRLGRDR 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147771488|emb|CAN69278.1| hypothetical protein VITISV_004877 [Vitis vinifera]

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/177 (49%), Positives = 109/177 (61%), Gaps = 15/177 (8%)

Query: 9   GSDHSSSDENEVKEL--DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTG 66
           G   +SS+EN+  E        +RSYECT+CKRGFTNAQALGGHMNIHRKDRAK KQ TG
Sbjct: 104 GGSETSSEENDRPEKVKGERGGRRSYECTYCKRGFTNAQALGGHMNIHRKDRAKTKQVTG 163

Query: 67  PSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPSASNPGNPPDYN- 125
            S  +S P   +E+YM  +  AP SS  +R+    E+QRNY  Y+ PS S+   P  Y+ 
Sbjct: 164 SS-GSSKP---NEEYMAYKDFAPFSSQPARYYESCEAQRNYPTYFPPSDSSSRYPHAYHE 219

Query: 126 ----VPRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAEEAGLDLELRLG 178
                P SE  S   ++Q LGANLSL IGP+  G+     + G  +E  +DLELRLG
Sbjct: 220 NNWSAPNSERFSF--DEQRLGANLSLQIGPTYRGDSGIERQYGKDDE--VDLELRLG 272

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|315661271|gb|ADU55564.1| transcriptional regulator superman [Malus x domestica]

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/190 (49%), Positives = 115/190 (60%), Gaps = 29/190 (15%)

Query: 11  DHSSSDENEVKELD----TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ-TT 65
           D SSSDE++V++ D     ++ KRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ  +
Sbjct: 10  DTSSSDEDQVRDDDHDSGATTVKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQLIS 69

Query: 66  GPSFITSNPMLTHEDYM------NPRY-IAPI-SSDTSRHSPVFESQRNYLRYYQPSASN 117
           G S + SN     + Y+      + +Y  API S   S + PV + Q NY  Y+QP+ SN
Sbjct: 70  GTSSLNSNHYSNEDQYISMSTSHHHQYSSAPIPSQGASGYYPVLD-QMNYQMYFQPNGSN 128

Query: 118 PGNPPDYNV------PRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAEEAGL 171
           P  P  Y+        RS+SL M  E  L GANLSL +      ED+E  RRG      +
Sbjct: 129 PRIPYGYDHDDSSVGSRSQSLGMNQE--LWGANLSLRL------EDDE-FRRGVRSNDEV 179

Query: 172 DLELRLGRNR 181
           DLELRLG  R
Sbjct: 180 DLELRLGNGR 189

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|315661269|gb|ADU55563.1| transcriptional regulator superman [Malus x domestica]

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/187 (47%), Positives = 113/187 (60%), Gaps = 30/187 (16%)

Query: 13  SSSDENEVKELD----TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ-TTGP 67
           SSSDE++V+  D     ++ KRSYECTFCKRGFTNAQALGGHMNIHRKDR K  Q  +G 
Sbjct: 12  SSSDEDQVRSDDHNSGAATVKRSYECTFCKRGFTNAQALGGHMNIHRKDRVKPMQHISGK 71

Query: 68  SFITSNPMLTHEDYM-------NPRYIA-PISSD-TSRHSPVFESQRNYLRYYQPSASNP 118
           S + +N     + Y+       + +Y + P+SS   S + PVF+ Q NY RY+QP+ SNP
Sbjct: 72  SSLNANHYSNEDQYISMSTSHHHHQYSSVPLSSQGVSGYYPVFD-QMNYQRYFQPTGSNP 130

Query: 119 GNPPDYNV------PRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAEEAGLD 172
             P  Y++       RS SL M  E  LLG NLSL +      ED+E  RRG      +D
Sbjct: 131 RIPYGYDLDDSSVGSRSHSLGMNQE--LLGTNLSLQL------EDDE-FRRGVRSNDEVD 181

Query: 173 LELRLGR 179
           LELRLG+
Sbjct: 182 LELRLGQ 188

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480004|ref|XP_003632388.1| PREDICTED: transcriptional regulator SUPERMAN-like [Vitis vinifera] gi|147794424|emb|CAN60537.1| hypothetical protein VITISV_010583 [Vitis vinifera]

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/153 (45%), Positives = 86/153 (56%), Gaps = 13/153 (8%)

Query: 31  SYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPI 90
           SY+C FCKRGFT AQALGGHMNIHRKDRAKAK    PS +   P    E+++N  +   I
Sbjct: 32  SYDCVFCKRGFTTAQALGGHMNIHRKDRAKAKP---PSSVL--PKKPEENFVNSGFCVSI 86

Query: 91  SSDTSRHSPVFESQRNYLRYYQPSASNPGNP-PDYNVPRSESLSMMNEDQLLGANLSLGI 149
            S    +S   E+Q NY  Y   S S   +P  D+   + E+ ++  ED      LSL +
Sbjct: 87  LSYKPPNSTAPEAQINYQEYILASTSPARDPIDDFRAEKQETPNVCKED--WRTCLSLQV 144

Query: 150 GPSCVGEDNEVMRRGTAE--EAGLDLELRLGRN 180
           GPSC  +  E   +G  E  E  LDLELRLG N
Sbjct: 145 GPSCAYDSKE---KGQEEKQEDELDLELRLGHN 174

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066277|ref|XP_002302060.1| predicted protein [Populus trichocarpa] gi|222843786|gb|EEE81333.1| predicted protein [Populus trichocarpa]

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 99/191 (51%), Gaps = 19/191 (9%)

Query: 1   MDSSQKQVGSDHSSSDENEV---KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKD 57
           M+S+Q    S  SSSDE E+    + DT +  RSYEC FCKRGFT AQALGGHMNIHRKD
Sbjct: 1   MESNQHDEDSK-SSSDEEEITDRSDQDTGTG-RSYECVFCKRGFTTAQALGGHMNIHRKD 58

Query: 58  RAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPSASN 117
           RAK++ ++ PS  +       EDY + +   PI S    +    E   NY  ++  S + 
Sbjct: 59  RAKSRPSSVPSLSSK----VDEDYASFQGYPPIQSYPPHYPTPHEVHINYQTFFPASTTW 114

Query: 118 PGNPP-------DYNVPRSESLSMMNEDQLLGANLSLGIGPSCVGEDN-EVMRRGTAEEA 169
               P       D+ V     L    +D     +LSL  GPS V ++  E +  G   + 
Sbjct: 115 GIGSPYAQQHNGDFYVQSPHHLYPFGDD--WRRSLSLQTGPSHVDDNTKEKIEDGIGADD 172

Query: 170 GLDLELRLGRN 180
            LDLELRLG +
Sbjct: 173 ELDLELRLGHD 183

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433269|ref|XP_004134420.1| PREDICTED: uncharacterized protein LOC101215172 [Cucumis sativus]

 Score = 92.8 bits (229), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/182 (42%), Positives = 101/182 (55%), Gaps = 35/182 (19%)

Query: 9   GSDHSSSDENE------VKELDTSS--AKRSYECTFCKRGFTNAQALGGHMNIHRKDRAK 60
           GS  SSSDE E      +K+ D  +   KR YECTFCKRGFTNAQALGGHMNIHRKDRAK
Sbjct: 7   GSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK 66

Query: 61  AKQTTGPSFI-TSNPMLTHEDYMNPRYIA--PISSDTSRHSPVFESQRNYLRYYQPSASN 117
           AK     +FI +S+   ++ D   P  I   P +     H P      +Y  Y+  +A+N
Sbjct: 67  AKHR---NFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPP----PPSYRMYFDTAATN 119

Query: 118 PGNPPDYNV-PRSESLSMMNEDQLLGANLSLGIGPSCVGEDNEVMRRGTAEEAGLDLELR 176
                 + + P+  S +++N+ +LLGANLSL I         +  R  + +   LDLELR
Sbjct: 120 ------FPIHPQITSPAVVNQ-ELLGANLSLEI---------DQTRGVSWKNEELDLELR 163

Query: 177 LG 178
           LG
Sbjct: 164 LG 165

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
TAIR|locus:2158367	137	AT5G43540 "AT5G43540" [Arabido	0.292	0.386	0.616	1.7e-15
TAIR|locus:2086193	172	URO "AT3G23140" [Arabidopsis t	0.845	0.889	0.323	8.8e-15
TAIR|locus:2083574	172	TAC1 "AT3G09290" [Arabidopsis	0.292	0.308	0.574	9.2e-15
TAIR|locus:2053796	214	ZFP11 "AT2G42410" [Arabidopsis	0.613	0.518	0.352	1.5e-14
TAIR|locus:2084390	142	AT3G53820 "AT3G53820" [Arabido	0.215	0.274	0.717	3.9e-14
TAIR|locus:2040726	304	ZFP10 "AT2G37740" [Arabidopsis	0.497	0.296	0.384	1.9e-13
TAIR|locus:505006582	226	RBE "AT5G06070" [Arabidopsis t	0.215	0.172	0.65	1.1e-12
TAIR|locus:2086268	204	SUP "AT3G23130" [Arabidopsis t	0.613	0.544	0.382	1.5e-12
TAIR|locus:2129495	204	AT4G17810 "AT4G17810" [Arabido	0.839	0.745	0.309	1.3e-11
TAIR|locus:2064579	257	ZFP8 "AT2G41940" [Arabidopsis	0.646	0.455	0.293	1e-08

TAIR|locus:2158367 AT5G43540 "AT5G43540" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
 Identities = 37/60 (61%), Positives = 43/60 (71%)

Query:    10 SDHSSSDENEVKELDTSSA------KRSYECTFCKRGFTNAQALGGHMNIHRKDRA-KAK 62
             S  +SS+   V+   TSS+      +R YECTFCKRGFTNAQALGGHMNIHR+DR  KAK
Sbjct:     7 SSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDRLNKAK 66

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2086193 URO "AT3G23140" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 56/173 (32%), Positives = 85/173 (49%)

Query:    21 KELDTSSA----KRSYECTFCKRGFTNAQALGGHMNIHRKDRAK--AKQTTGPSFITSNP 74
             K++D+ S     +R+Y+C  CKRGFTN QALGGH NIHR++R +  +  ++  SF  S P
Sbjct:     6 KQIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSHSFPFSLP 65

Query:    75 MLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPSASNPGNPPDYNVPRSESLSM 134
             +        P      S++ +   P F +  +YL        NP +   Y    S S   
Sbjct:    66 L--------PSQSPSSSTNFTNPPPYFPTIESYLHQGSQPPINPSHNTQYFGSSSSSRGG 117

Query:   135 MNEDQLLGANLSLGIGPSCVGEDNEVMRR-----GTAEEAG-LDLELRLGRNR 181
                 Q    +L+L +G   + ED++  R      G+  + G LDL+LRLG +R
Sbjct:   118 GRFAQGASHDLNLSLGLGSMNEDDDTHRSPPETGGSQPQDGDLDLDLRLGGHR 170

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010252 "auxin homeostasis" evidence=IMP

TAIR|locus:2083574 TAC1 "AT3G09290" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
 Identities = 31/54 (57%), Positives = 41/54 (75%)

Query:    10 SDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ 63
             SD  S + ++  + D+ +  RSY C+FC RGF+NAQALGGHMNIHR+DRAK +Q
Sbjct:    14 SDSISKNSHQGVD-DSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQ 66

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IMP

GO:0051973 "positive regulation of telomerase activity" evidence=IGI

GO:0006826 "iron ion transport" evidence=RCA

GO:0010043 "response to zinc ion" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2053796 ZFP11 "AT2G42410" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 43/122 (35%), Positives = 65/122 (53%)

Query:     2 DSSQKQVGSDHSSSDE---NEVKELDTSSAK---RSYECTFCKRGFTNAQALGGHMNIHR 55
             D +Q++ G D +  +    N  K  +        ++Y C+FC+R F +AQALGGHMN+HR
Sbjct:    13 DKTQEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHR 72

Query:    56 KDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSR-H-SPVFESQRNYLRYYQP 113
             +DRAK +Q   PS++      T     NP + +  SS T+  H  P   +QR+    + P
Sbjct:    73 RDRAKLRQI--PSWLFEPHHHTPIANPNPNFSSSSSSSTTTAHLEPSLTNQRSKTTPF-P 129

Query:   114 SA 115
             SA
Sbjct:   130 SA 131

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2084390 AT3G53820 "AT3G53820" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
 Identities = 28/39 (71%), Positives = 32/39 (82%)

Query:    25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ 63
             + S  R Y C FC+RGF+NAQALGGHMNIHRKDRAK +Q
Sbjct:    14 SGSQARPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQ 52

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2040726 ZFP10 "AT2G37740" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
 Identities = 40/104 (38%), Positives = 58/104 (55%)

Query:    13 SSSDENEVKELDTSSA---KRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTG--- 66
             SS +E    E D + +    RSY C+FC+R F +AQALGGHMN+HR+DRA+ KQ      
Sbjct:    17 SSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYL 76

Query:    67 -PSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLR 109
              P   +S    +H+D  N         +TS ++ VF ++ NY +
Sbjct:    77 FPKSSSSPEYPSHKDSDNIH-------ETSCYTLVFNTKPNYFK 113

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:505006582 RBE "AT5G06070" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 26/40 (65%), Positives = 32/40 (80%)

Query:    30 RSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT-GPS 68
             RSY C+FC R F +AQALGGHMN+HR+DRA+ KQ +  PS
Sbjct:    53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPS 92

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009934 "regulation of meristem structural organization" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048441 "petal development" evidence=IMP

GO:0048446 "petal morphogenesis" evidence=RCA

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2086268 SUP "AT3G23130" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 47/123 (38%), Positives = 63/123 (51%)

Query:    11 DHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFI 70
             D+ +  ++    L  S   RSY C+FCKR F +AQALGGHMN+HR+DRA+ +    PS  
Sbjct:    26 DYDNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSS- 84

Query:    71 TSNPMLTHEDYMNPRYIAPISSDTSRHSPVFESQRNYLRYYQPSASNPGNPPDYNVPRSE 130
             +S P      Y NP Y    S  T  +SP      + L  + P+ S P +P  Y      
Sbjct:    85 SSTPS---PPYPNPNY----SYSTMANSP--PPHHSPLTLF-PTLSPPSSPR-YRAGLIR 133

Query:   131 SLS 133
             SLS
Sbjct:   134 SLS 136

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IMP;TAS

GO:0003677 "DNA binding" evidence=IDA;TAS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009755 "hormone-mediated signaling pathway" evidence=IMP

GO:0010160 "formation of organ boundary" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0010093 "specification of floral organ identity" evidence=IGI;RCA

GO:0048440 "carpel development" evidence=RCA

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2129495 AT4G17810 "AT4G17810" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 52/168 (30%), Positives = 76/168 (45%)

Query:    25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP 84
             T+   RSY C FC+R F +AQALGGHMN+HR+DRA ++   G S + +     H   +  
Sbjct:    39 TTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRASSRAHQG-STVAAAARSGHGGMLLN 97

Query:    85 RYIAPISSDTSRHSPVFESQRNYLRYYQPSASNP----GNPPDY-NVPRSESLSMMNEDQ 139
                 P+ + T        +      +YQ    NP    GN  D  N+  + S    N   
Sbjct:    98 SCAPPLPTTTLIIQSTASNIEGLSHFYQ--LQNPSGIFGNSGDMVNLYGTTSFPPSNLPF 155

Query:   140 LLGANLSLGIGPSCV----GEDNEV--MRRGTAEEAG-LDLELRLGRN 180
              +  N  + + P  +    G+D  +  M+  T      LDLELRLG +
Sbjct:   156 SM-LNSPVEVPPRLIEYSTGDDESIGSMKEATGTSVDELDLELRLGHH 202

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0006417 "regulation of translation" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2064579 ZFP8 "AT2G41940" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 39/133 (29%), Positives = 67/133 (50%)

Query:     2 DSSQKQVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKA 61
             D S + +       D++  K+ D ++ +R +EC +C R F  +QALGGH N H+++R  A
Sbjct:    68 DESSENIKDKDKEKDKD--KDKDNNNNRR-FECHYCFRNFPTSQALGGHQNAHKRERQHA 124

Query:    62 KQTTGPSFITSNPMLTHEDYMNPRYIAP-ISSDTSRHSPVFESQ-RNYLR---YYQPS-- 114
             K+ +  S+      L H    +P +I   +++   RH P + ++ R+Y     +  PS  
Sbjct:   125 KRGSMTSY------LHHHQPHDPHHIYGFLNNHHHRHYPSWTTEARSYYGGGGHQTPSYY 178

Query:   115 ASNPGNPPDYNVP 127
             + N   PP  N P
Sbjct:   179 SRNTLAPPSSNPP 191

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0010026 "trichome differentiation" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_X000690 hypothetical protein (192 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	181
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.8
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.75
KOG3576	267	consensus Ovo and related transcription factors [T	99.57
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.53
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.3
KOG3608	467	consensus Zn finger proteins [General function pre	99.22
PHA02768	55	hypothetical protein; Provisional	99.1
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.04
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.02
KOG3576	267	consensus Ovo and related transcription factors [T	99.0
PHA00733	128	hypothetical protein	98.9
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.73
PLN03086	567	PRLI-interacting factor K; Provisional	98.69
PHA00733	128	hypothetical protein	98.66
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.61
KOG3608	467	consensus Zn finger proteins [General function pre	98.53
PHA02768	55	hypothetical protein; Provisional	98.4
PHA00616	44	hypothetical protein	98.26
PHA00732	79	hypothetical protein	98.25
PLN03086	567	PRLI-interacting factor K; Provisional	97.96
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.72
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.71
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.69
PHA00732	79	hypothetical protein	97.53
KOG3993	500	consensus Transcription factor (contains Zn finger	97.49
PHA00616	44	hypothetical protein	97.29
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.25
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.21
PRK04860	160	hypothetical protein; Provisional	97.16
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.1
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.77
smart00355	26	ZnF_C2H2 zinc finger.	96.68
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.67
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.57
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.5
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.47
KOG3993	500	consensus Transcription factor (contains Zn finger	96.08
smart00355	26	ZnF_C2H2 zinc finger.	95.93
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.64
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.65
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	94.63
KOG2893	341	consensus Zn finger protein [General function pred	94.34
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	94.34
COG5048	467	FOG: Zn-finger [General function prediction only]	93.7
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.65
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.46
COG5048	467	FOG: Zn-finger [General function prediction only]	93.46
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	93.45
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	93.16
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.42
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.5
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.36
KOG1146	1406	consensus Homeobox protein [General function predi	89.2
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	88.79
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	87.73
PRK04860	160	hypothetical protein; Provisional	84.64
KOG2186	276	consensus Cell growth-regulating nucleolar protein	83.8
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	83.71
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	82.39
smart00531	147	TFIIE Transcription initiation factor IIE.	81.37
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	81.02
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	80.53
COG5236	493	Uncharacterized conserved protein, contains RING Z	80.22

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.80  E-value=1.2e-20  Score=150.23  Aligned_cols=96  Identities=15%  Similarity=0.224  Sum_probs=83.7

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNP   84 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~   84 (181)
                      ..|+|.+..-..|..|+++|+  -+++|.+|||.|.+.--|.+|+|+|||||||.|+.|+|+|+..++|+.||++  +.+
T Consensus       165 ~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K  242 (279)
T KOG2462|consen  165 KYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVK  242 (279)
T ss_pred             CCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCc
Confidence            467777777778888888887  6899999999999999999999999999999999999999999999999999  789


Q ss_pred             CCCCCCCCCCCCCCCchhhh
Q 037433           85 RYIAPISSDTSRHSPVFESQ  104 (181)
Q Consensus        85 ~~~c~~~~~~~~~~~~~~~~  104 (181)
                      +|.|+.|........-|+.|
T Consensus       243 ~~qC~~C~KsFsl~SyLnKH  262 (279)
T KOG2462|consen  243 KHQCPRCGKSFALKSYLNKH  262 (279)
T ss_pred             cccCcchhhHHHHHHHHHHh
Confidence            99999999776544444443

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.75  E-value=2.4e-19  Score=142.81  Aligned_cols=77  Identities=17%  Similarity=0.299  Sum_probs=74.1

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +.|+|.|++-.-|..|+|+|||||||.|..|+|+|..+++|+.||++|.+.|+|+|..|+|+|+..+.|.+|....-
T Consensus       191 ~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~C  267 (279)
T KOG2462|consen  191 GICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESAC  267 (279)
T ss_pred             ccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhcc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999998653

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.57  E-value=2.3e-16  Score=120.94  Aligned_cols=101  Identities=19%  Similarity=0.234  Sum_probs=88.8

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh-----
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY-----   81 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-----   81 (181)
                      .+|+|.|.-..-|.+|++.|...|.|.|.+|||+|...-.|++|+++|||.+||+|..|+|+|.+..+|..|.+.     
T Consensus       121 rvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~  200 (267)
T KOG3576|consen  121 RVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQ  200 (267)
T ss_pred             ehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCch
Confidence            468999999999999999999999999999999999999999999999999999999999999999999888763     


Q ss_pred             --------cCCCCCCCCCCCCCCCCCchhhhccc
Q 037433           82 --------MNPRYIAPISSDTSRHSPVFESQRNY  107 (181)
Q Consensus        82 --------~~~~~~c~~~~~~~~~~~~~~~~~~~  107 (181)
                              ..+-|.|..|++.....-..-.|++.
T Consensus       201 ~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~  234 (267)
T KOG3576|consen  201 HQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKL  234 (267)
T ss_pred             HHHHHHHhhhheeeecccCCCCCChhHHHHHHHh
Confidence                    35678899999887655555555543

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.53  E-value=1.2e-15  Score=134.52  Aligned_cols=74  Identities=18%  Similarity=0.318  Sum_probs=64.6

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHH
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHED   80 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~   80 (181)
                      ++|.|.|.-.+.|.+|.--|+|.|||.|.+|.|+|+.+.+|..|+|.|.|||||+|..|+|+|+...++..||.
T Consensus       898 DqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  898 DQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             HHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            57888888888888888888888888888888888888888888888888888888888888888888888885

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.30  E-value=5.3e-13  Score=118.04  Aligned_cols=86  Identities=16%  Similarity=0.247  Sum_probs=79.2

Q ss_pred             CCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCCCCCCCCCCchhhh
Q 037433           27 SAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPISSDTSRHSPVFESQ  104 (181)
Q Consensus        27 ~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~~~~~~~~~~~  104 (181)
                      +..-.|.|..|.|+|...+.|.+|..-|+|.|||+|.+|.|+|..+.+|..|+|.  +++||+|..|........+..-|
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQH  969 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQH  969 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhh
Confidence            3455899999999999999999999999999999999999999999999999998  89999999999999999999999


Q ss_pred             cccccccC
Q 037433          105 RNYLRYYQ  112 (181)
Q Consensus       105 ~~~~~~~~  112 (181)
                      ||....|-
T Consensus       970 MNHRYSYC  977 (1007)
T KOG3623|consen  970 MNHRYSYC  977 (1007)
T ss_pred             hccchhcc
Confidence            99865443

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.22  E-value=1.6e-12  Score=107.11  Aligned_cols=100  Identities=15%  Similarity=0.204  Sum_probs=90.0

Q ss_pred             CCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhc--CCCCccCCCCCCCCCCCchhHHHHHhcCCC
Q 037433            8 VGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHR--KDRAKAKQTTGPSFITSNPMLTHEDYMNPR   85 (181)
Q Consensus         8 ~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~--gekp~~C~~C~k~F~~~~~L~~H~~~~~~~   85 (181)
                      .|.+.+..+.+|..|+++|+++|...|.+||..|.+...|-.|.+..+  ...+|.|..|.|.|.+...|+.|+..|..-
T Consensus       184 ~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~  263 (467)
T KOG3608|consen  184 MCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNC  263 (467)
T ss_pred             hhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhc
Confidence            488899999999999999999999999999999999999999988654  457899999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCchhhhccc
Q 037433           86 YIAPISSDTSRHSPVFESQRNY  107 (181)
Q Consensus        86 ~~c~~~~~~~~~~~~~~~~~~~  107 (181)
                      |+||+|++......++..|+.|
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~  285 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRY  285 (467)
T ss_pred             ccccccccCCCChHHHHHHHHh
Confidence            9999999888776677666654

>PHA02768 hypothetical protein; Provisional

Probab=99.10  E-value=4.8e-11  Score=73.59  Aligned_cols=44  Identities=14%  Similarity=0.332  Sum_probs=40.4

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhH
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPML   76 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~   76 (181)
                      -|+|..||+.|+..++|..||++|+  ++|+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999999999  7999999999999887653

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.04  E-value=4.9e-11  Score=107.12  Aligned_cols=51  Identities=24%  Similarity=0.389  Sum_probs=29.8

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      |-.|.+|.|..+-..+|+-|.++|+|||||+|.+||++|.++.+|+.||-+
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~v  655 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSV  655 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccc
Confidence            345555555555555566565556666666666666666655555555554

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.02  E-value=1.8e-10  Score=103.62  Aligned_cols=78  Identities=18%  Similarity=0.252  Sum_probs=69.8

Q ss_pred             CCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCC----CccCC---CCCCCCCCCchhHHHHHh
Q 037433            9 GSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDR----AKAKQ---TTGPSFITSNPMLTHEDY   81 (181)
Q Consensus         9 c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gek----p~~C~---~C~k~F~~~~~L~~H~~~   81 (181)
                      |-+-.+..+.|..|+++|+|+|||+|.+||++|+++.+|+.||-+|...-    ++.|+   +|-+.|...-.|..|+++
T Consensus       611 C~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQhIri  690 (958)
T KOG1074|consen  611 CLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRI  690 (958)
T ss_pred             eeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccceEEe
Confidence            56667778899999999999999999999999999999999999998764    46798   999999999999999999


Q ss_pred             cCCCC
Q 037433           82 MNPRY   86 (181)
Q Consensus        82 ~~~~~   86 (181)
                      |....
T Consensus       691 H~~~~  695 (958)
T KOG1074|consen  691 HLGGQ  695 (958)
T ss_pred             ecCCC
Confidence            77554

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.00  E-value=3.7e-11  Score=92.48  Aligned_cols=80  Identities=16%  Similarity=0.258  Sum_probs=74.0

Q ss_pred             CCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCCCCCCCCCCchhhhc
Q 037433           28 AKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPISSDTSRHSPVFESQR  105 (181)
Q Consensus        28 ~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~~~~~~~~~~~~  105 (181)
                      +...|.|.+|+|.|.....|.+|++.|...|.|.|..|||.|...-.|++|+|+  +..||+|..|+.....-.++++|.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            355799999999999999999999999999999999999999999999999998  789999999999988888999887


Q ss_pred             cc
Q 037433          106 NY  107 (181)
Q Consensus       106 ~~  107 (181)
                      ..
T Consensus       194 ~k  195 (267)
T KOG3576|consen  194 KK  195 (267)
T ss_pred             HH
Confidence            53

>PHA00733 hypothetical protein

Probab=98.90  E-value=2e-09  Score=78.51  Aligned_cols=61  Identities=23%  Similarity=0.377  Sum_probs=43.5

Q ss_pred             HHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc
Q 037433           19 EVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        19 L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      |.+|+.++ +.+||.|..|++.|.....|..|+++|  +++|.|..|++.|.....|..|+...
T Consensus        62 l~~~~~~~-~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~  122 (128)
T PHA00733         62 LYKLLTSK-AVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKK  122 (128)
T ss_pred             HHhhcccC-CCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHh
Confidence            33443333 367788888888888888888887765  35678888888888888888877653

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.73  E-value=4e-09  Score=55.68  Aligned_cols=24  Identities=29%  Similarity=0.389  Sum_probs=14.2

Q ss_pred             HHHhHHhhcCCCCccCCCCCCCCC
Q 037433           47 LGGHMNIHRKDRAKAKQTTGPSFI   70 (181)
Q Consensus        47 L~~H~~~H~gekp~~C~~C~k~F~   70 (181)
                      |.+|+++|+++|||.|+.|+++|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            555666666666666666665554

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.69  E-value=2.7e-08  Score=87.99  Aligned_cols=83  Identities=11%  Similarity=0.063  Sum_probs=70.1

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCC----------CchhH
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFIT----------SNPML   76 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~----------~~~L~   76 (181)
                      +.|+++|. ...|..|+.+++  +++.|. |++.+ ....|..|+.+|..+|++.|..|++.|..          ...|.
T Consensus       457 ~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt  531 (567)
T PLN03086        457 EKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMS  531 (567)
T ss_pred             CCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHH
Confidence            56888885 678999999985  789999 99765 66889999999999999999999999852          34789


Q ss_pred             HHHHh-cCCCCCCCCCCCC
Q 037433           77 THEDY-MNPRYIAPISSDT   94 (181)
Q Consensus        77 ~H~~~-~~~~~~c~~~~~~   94 (181)
                      .|+.+ +.+.+.|..|+..
T Consensus       532 ~HE~~CG~rt~~C~~Cgk~  550 (567)
T PLN03086        532 EHESICGSRTAPCDSCGRS  550 (567)
T ss_pred             HHHHhcCCcceEccccCCe
Confidence            99998 7888899999854

>PHA00733 hypothetical protein

Probab=98.66  E-value=9.6e-09  Score=74.89  Aligned_cols=87  Identities=11%  Similarity=0.075  Sum_probs=66.2

Q ss_pred             hHHHHhhhcCCCcceeCCcccccCCChHHHHHh--HH---hhcCCCCccCCCCCCCCCCCchhHHHHHhcCCCCCCCCCC
Q 037433           18 NEVKELDTSSAKRSYECTFCKRGFTNAQALGGH--MN---IHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISS   92 (181)
Q Consensus        18 ~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H--~~---~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~~~~c~~~~   92 (181)
                      .|.++-......+++.|.+|++.|.....|..+  +.   .+.+.+||.|..|++.|.....|..|++++..+|.|+.|+
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~Cg  106 (128)
T PHA00733         27 ELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCG  106 (128)
T ss_pred             HhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCC
Confidence            344443333446789999999999988887776  22   2345789999999999999999999999877789999999


Q ss_pred             CCCCCCCchhhh
Q 037433           93 DTSRHSPVFESQ  104 (181)
Q Consensus        93 ~~~~~~~~~~~~  104 (181)
                      ........+..|
T Consensus       107 K~F~~~~sL~~H  118 (128)
T PHA00733        107 KEFRNTDSTLDH  118 (128)
T ss_pred             CccCCHHHHHHH
Confidence            776554444433

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.61  E-value=1.9e-08  Score=53.07  Aligned_cols=26  Identities=27%  Similarity=0.829  Sum_probs=24.0

Q ss_pred             hHHHHhhhcCCCcceeCCcccccCCC
Q 037433           18 NEVKELDTSSAKRSYECTFCKRGFTN   43 (181)
Q Consensus        18 ~L~~h~~~h~~~kp~~C~~C~k~F~~   43 (181)
                      +|.+|+++|++++||.|.+|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58899999999999999999999964

...

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.53  E-value=7.7e-08  Score=79.76  Aligned_cols=99  Identities=13%  Similarity=0.120  Sum_probs=78.0

Q ss_pred             CCCCCCCCCchhHHHHhhh-cCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC--CCCCCCCCchhHHHHHhc-
Q 037433            7 QVGSDHSSSDENEVKELDT-SSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT--TGPSFITSNPMLTHEDYM-   82 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~-h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~~-   82 (181)
                      +.|+.+-...+.|.+|++. |...|||+|..|.+.|.+...|.+|..+|. +..|.|..  |..+|.+...+++|++.+ 
T Consensus       267 plCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  267 PLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             cccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhc
Confidence            5678888888888888774 677889999999999999999999988888 77788876  888888888888888762 


Q ss_pred             ----CCCCCCCCCCCCCCCCCchhhhcc
Q 037433           83 ----NPRYIAPISSDTSRHSPVFESQRN  106 (181)
Q Consensus        83 ----~~~~~c~~~~~~~~~~~~~~~~~~  106 (181)
                          ..+|.|-.|+.....--.+..|+.
T Consensus       346 Eg~np~~Y~CH~Cdr~ft~G~~L~~HL~  373 (467)
T KOG3608|consen  346 EGNNPILYACHCCDRFFTSGKSLSAHLM  373 (467)
T ss_pred             cCCCCCceeeecchhhhccchhHHHHHH
Confidence                456788888866555445665553

>PHA02768 hypothetical protein; Provisional

Probab=98.40  E-value=1.9e-07  Score=57.69  Aligned_cols=38  Identities=18%  Similarity=0.140  Sum_probs=34.6

Q ss_pred             CccCCCCCCCCCCCchhHHHHHhcCCCCCCCCCCCCCC
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSR   96 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~~~~~~~c~~~~~~~~   96 (181)
                      -|.|+.||+.|+..++|..|+++|.++|.|..|.....
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~   42 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISL   42 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcCCcccCCcccceec
Confidence            47999999999999999999999999999999986554

>PHA00616 hypothetical protein

Probab=98.26  E-value=4e-07  Score=53.62  Aligned_cols=34  Identities=18%  Similarity=0.276  Sum_probs=31.5

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      ||.|..||+.|...+.|..|++.|+|++++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999998863

>PHA00732 hypothetical protein

Probab=98.25  E-value=7.5e-07  Score=59.51  Aligned_cols=45  Identities=18%  Similarity=0.205  Sum_probs=38.4

Q ss_pred             ceeCCcccccCCChHHHHHhHHh-hcCCCCccCCCCCCCCCCCchhHHHHHh
Q 037433           31 SYECTFCKRGFTNAQALGGHMNI-HRKDRAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~-H~gekp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      ||.|..|++.|.....|..|++. |+   ++.|..|++.|.   .+..|..+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            58899999999999999999984 66   368999999998   46778765

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.96  E-value=1.1e-05  Score=71.56  Aligned_cols=70  Identities=19%  Similarity=0.251  Sum_probs=59.2

Q ss_pred             CCCCCCCchhHHHHhhhcCCCcceeCCcccccCC----------ChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHH
Q 037433            9 GSDHSSSDENEVKELDTSSAKRSYECTFCKRGFT----------NAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTH   78 (181)
Q Consensus         9 c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~----------~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H   78 (181)
                      |++.+ ....|..|+.+|.+++++.|.+|++.|.          ....|..|..+. |.+++.|..|++.|.... +..|
T Consensus       483 Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlrd-m~~H  559 (567)
T PLN03086        483 CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLKE-MDIH  559 (567)
T ss_pred             CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeeehh-HHHH
Confidence            78755 5689999999999999999999999985          245899999885 999999999999988764 4777


Q ss_pred             HHh
Q 037433           79 EDY   81 (181)
Q Consensus        79 ~~~   81 (181)
                      +..
T Consensus       560 ~~~  562 (567)
T PLN03086        560 QIA  562 (567)
T ss_pred             HHH
Confidence            654

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.72  E-value=1.2e-05  Score=66.17  Aligned_cols=53  Identities=23%  Similarity=0.435  Sum_probs=44.0

Q ss_pred             CcceeCCc--ccccCCChHHHHHhHHh-h------------------cCCCCccCCCCCCCCCCCchhHHHHHh
Q 037433           29 KRSYECTF--CKRGFTNAQALGGHMNI-H------------------RKDRAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        29 ~kp~~C~~--C~k~F~~~~~L~~H~~~-H------------------~gekp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      +|||+|.+  |.|.|++.--|+-|+.- |                  ...|||+|++|+|++.....|+.|+..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            59999987  99999999999999752 3                  134899999999999998888888753

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.71  E-value=2.3e-05  Score=39.58  Aligned_cols=23  Identities=35%  Similarity=0.871  Sum_probs=18.4

Q ss_pred             eeCCcccccCCChHHHHHhHHhh
Q 037433           32 YECTFCKRGFTNAQALGGHMNIH   54 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~H   54 (181)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67888888888888888888764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.69  E-value=7.2e-05  Score=46.19  Aligned_cols=50  Identities=18%  Similarity=0.444  Sum_probs=38.8

Q ss_pred             ceeCCcccccCCChHHHHHhHHh-hcCC-CCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           31 SYECTFCKRGFTNAQALGGHMNI-HRKD-RAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~-H~ge-kp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      .|.|++|++. .....|..|... |..+ +.+.|++|...+.  .+|..|+...+
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            4899999995 456789999765 7665 5789999998655  48889988643

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=97.53  E-value=6.3e-05  Score=50.22  Aligned_cols=38  Identities=13%  Similarity=0.079  Sum_probs=33.1

Q ss_pred             CccCCCCCCCCCCCchhHHHHHhcCCCCCCCCCCCCCC
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSR   96 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~~~~~~~c~~~~~~~~   96 (181)
                      ||.|..|++.|.+...|+.|++.++.++.|+.|+....
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~   38 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYR   38 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeC
Confidence            68999999999999999999996556788999987664

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.49  E-value=2.2e-05  Score=66.69  Aligned_cols=76  Identities=14%  Similarity=0.181  Sum_probs=58.3

Q ss_pred             CCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhc--------CCC----------------------
Q 037433            9 GSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHR--------KDR----------------------   58 (181)
Q Consensus         9 c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~--------gek----------------------   58 (181)
                      |..-|.+.=.|.+|.-...-.--|+|..|+|.|.-..+|..|.|.|.        +..                      
T Consensus       273 CK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~ds  352 (500)
T KOG3993|consen  273 CKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDS  352 (500)
T ss_pred             HHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcc
Confidence            33344444567788665555556999999999999999999999884        212                      


Q ss_pred             ---CccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           59 ---AKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        59 ---p~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                         -|.|..|+|.|.+...|++|+-+|+.
T Consensus       353 s~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  353 SSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             cCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence               37899999999999999999777543

>PHA00616 hypothetical protein

Probab=97.29  E-value=6.8e-05  Score=44.18  Aligned_cols=31  Identities=10%  Similarity=0.009  Sum_probs=25.9

Q ss_pred             CccCCCCCCCCCCCchhHHHHHh--cCCCCCCC
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDY--MNPRYIAP   89 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~   89 (181)
                      ||+|..||+.|...+.|..|++.  ++.++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            68999999999999999999997  44555443

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.25  E-value=0.00017  Score=37.79  Aligned_cols=25  Identities=32%  Similarity=0.648  Sum_probs=20.6

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhc
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      +|.|..|++.|....+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5788888888888888888887764

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.21  E-value=6.9e-05  Score=37.78  Aligned_cols=22  Identities=18%  Similarity=0.166  Sum_probs=20.7

Q ss_pred             ccCCCCCCCCCCCchhHHHHHh
Q 037433           60 KAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        60 ~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      |.|+.|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            6899999999999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PRK04860 hypothetical protein; Provisional

Probab=97.16  E-value=0.00024  Score=53.71  Aligned_cols=40  Identities=15%  Similarity=0.397  Sum_probs=34.3

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCc
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSN   73 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~   73 (181)
                      -+|.|. |++   ....+.+|.++|+++++|.|..|++.|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            479998 987   6777899999999999999999999887543

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.10  E-value=0.00041  Score=34.76  Aligned_cols=23  Identities=30%  Similarity=0.846  Sum_probs=15.5

Q ss_pred             eeCCcccccCCChHHHHHhHHhh
Q 037433           32 YECTFCKRGFTNAQALGGHMNIH   54 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~H   54 (181)
                      |.|.+|++.|.....|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            56777777777777777777664

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.77  E-value=0.00038  Score=34.90  Aligned_cols=24  Identities=17%  Similarity=0.134  Sum_probs=19.7

Q ss_pred             ccCCCCCCCCCCCchhHHHHHhcC
Q 037433           60 KAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        60 ~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |.|..|++.|.+...|+.|+++++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999998753

...

>smart00355 ZnF_C2H2 zinc finger

Probab=96.68  E-value=0.0017  Score=32.85  Aligned_cols=24  Identities=38%  Similarity=0.746  Sum_probs=16.3

Q ss_pred             eeCCcccccCCChHHHHHhHHhhc
Q 037433           32 YECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      |.|..|++.|.....|..|+++|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            457777777777777777776554

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.67  E-value=0.0011  Score=54.85  Aligned_cols=43  Identities=7%  Similarity=0.045  Sum_probs=36.7

Q ss_pred             CCCCccCCC--CCCCCCCCchhHHHHHhcC---------------------CCCCCCCCCCCCCCC
Q 037433           56 KDRAKAKQT--TGPSFITSNPMLTHEDYMN---------------------PRYIAPISSDTSRHS   98 (181)
Q Consensus        56 gekp~~C~~--C~k~F~~~~~L~~H~~~~~---------------------~~~~c~~~~~~~~~~   98 (181)
                      ++|||+|++  |.|.+.....|+.|+..++                     +||.|++|+..+...
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNl  411 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNL  411 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccC
Confidence            359999964  9999999999999998766                     999999999776543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.57  E-value=0.00085  Score=45.68  Aligned_cols=69  Identities=7%  Similarity=0.033  Sum_probs=20.8

Q ss_pred             CCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh
Q 037433            8 VGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus         8 ~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      .|..+|.....|..|+....+-..-    ....+.....+..+.+. .-...+.|..|++.|.+...|..|++.
T Consensus         4 ~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    4 FCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRK-KVKESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             --------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccc----ccccccccccccccccc-ccCCCCCCCccCCCCcCHHHHHHHHcC
Confidence            4666777777777776543332110    11111222222222221 112368999999999999999999997

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.50  E-value=0.00059  Score=35.69  Aligned_cols=25  Identities=12%  Similarity=0.138  Sum_probs=22.7

Q ss_pred             CccCCCCCCCCCCCchhHHHHHhcC
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +|.|..|++.|.....|..|++.+.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.47  E-value=0.0032  Score=38.12  Aligned_cols=33  Identities=15%  Similarity=0.426  Sum_probs=21.2

Q ss_pred             CCCcceeCCcccccCCChHHHHHhHHhhcCCCC
Q 037433           27 SAKRSYECTFCKRGFTNAQALGGHMNIHRKDRA   59 (181)
Q Consensus        27 ~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp   59 (181)
                      ..+.|..|.+|+..+....+|++|+.++.+.||
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            456778888888888888888888887776665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=96.08  E-value=0.0013  Score=56.21  Aligned_cols=53  Identities=19%  Similarity=0.314  Sum_probs=44.8

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      -|.|..|...|...-.|..|.-.-.-..-|+|+.|+|.|+...+|..|.|-|.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccC
Confidence            39999999999999999999643333456999999999999999999988543

>smart00355 ZnF_C2H2 zinc finger

Probab=95.93  E-value=0.0052  Score=30.92  Aligned_cols=23  Identities=13%  Similarity=0.111  Sum_probs=20.8

Q ss_pred             ccCCCCCCCCCCCchhHHHHHhc
Q 037433           60 KAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        60 ~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      |.|..|++.|.....|..|+++|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            57999999999999999999864

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.64  E-value=0.0063  Score=31.02  Aligned_cols=23  Identities=22%  Similarity=0.745  Sum_probs=18.0

Q ss_pred             eeCCcccccCCChHHHHHhHHhh
Q 037433           32 YECTFCKRGFTNAQALGGHMNIH   54 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~H   54 (181)
                      |.|.+|++.|.....+..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56888888888888888887653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.65  E-value=0.014  Score=30.47  Aligned_cols=22  Identities=27%  Similarity=0.658  Sum_probs=17.6

Q ss_pred             eeCCcccccCCChHHHHHhHHh
Q 037433           32 YECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      |.|..|++.|.....+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6688888888888888888764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=94.63  E-value=0.053  Score=33.19  Aligned_cols=48  Identities=17%  Similarity=0.270  Sum_probs=35.0

Q ss_pred             CCCCCCCCCCCchhHHHHhhh-cCC-CcceeCCcccccCCChHHHHHhHHhhc
Q 037433            5 QKQVGSDHSSSDENEVKELDT-SSA-KRSYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus         5 ~~~~c~~sf~~~s~L~~h~~~-h~~-~kp~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      .=|.|++. .+...|..|... |.. .+.+.|++|...++  .+|..|+.++.
T Consensus         4 ~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    4 TCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            34789994 445789999654 554 35799999998655  48999988643

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=94.34  E-value=0.017  Score=46.14  Aligned_cols=39  Identities=15%  Similarity=0.324  Sum_probs=30.9

Q ss_pred             eCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchh
Q 037433           33 ECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPM   75 (181)
Q Consensus        33 ~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L   75 (181)
                      .|.+|++.|.....|..|++    .|-|+|.+|-|..-+-..|
T Consensus        12 wcwycnrefddekiliqhqk----akhfkchichkkl~sgpgl   50 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGL   50 (341)
T ss_pred             eeeecccccchhhhhhhhhh----hccceeeeehhhhccCCCc
Confidence            59999999999999998876    4779999998765444333

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=94.34  E-value=0.043  Score=37.06  Aligned_cols=25  Identities=32%  Similarity=0.822  Sum_probs=21.9

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhc
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      .+.|.+|++.|.....|..|++.+.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCcc
Confidence            6999999999999999999999743

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.70  E-value=0.022  Score=47.81  Aligned_cols=52  Identities=15%  Similarity=0.263  Sum_probs=33.4

Q ss_pred             cceeCCcccccCCChHHHHHhHH--hhcCC--CCccCC--CCCCCCCCCchhHHHHHh
Q 037433           30 RSYECTFCKRGFTNAQALGGHMN--IHRKD--RAKAKQ--TTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~--~H~ge--kp~~C~--~C~k~F~~~~~L~~H~~~   81 (181)
                      .++.|..|...|+....|..|.+  .|+++  +++.|.  .|++.|.+...+..|..+
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  345 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILL  345 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccc
Confidence            35666666666666666666666  56666  666666  566666666666666555

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.65  E-value=0.057  Score=27.14  Aligned_cols=22  Identities=27%  Similarity=0.676  Sum_probs=13.9

Q ss_pred             eeCCcccccCCChHHHHHhHHhh
Q 037433           32 YECTFCKRGFTNAQALGGHMNIH   54 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~H   54 (181)
                      |.|..|..... ...|..|+++|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            56777776666 67777777664

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.46  E-value=0.063  Score=27.62  Aligned_cols=21  Identities=38%  Similarity=0.751  Sum_probs=14.9

Q ss_pred             eeCCcccccCCChHHHHHhHHh
Q 037433           32 YECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      ..|..|++.| ....|.+|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3578888888 66667777653

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.46  E-value=0.028  Score=47.18  Aligned_cols=68  Identities=16%  Similarity=0.328  Sum_probs=58.0

Q ss_pred             CCCCCCCCCCCchhHHHHhh--hcCCC--cceeCC--cccccCCChHHHHHhHHhhcCCCCccCC--CCCCCCCCC
Q 037433            5 QKQVGSDHSSSDENEVKELD--TSSAK--RSYECT--FCKRGFTNAQALGGHMNIHRKDRAKAKQ--TTGPSFITS   72 (181)
Q Consensus         5 ~~~~c~~sf~~~s~L~~h~~--~h~~~--kp~~C~--~C~k~F~~~~~L~~H~~~H~gekp~~C~--~C~k~F~~~   72 (181)
                      ....|...|.+...+..|.+  .|+++  +++.|.  .|++.|.+...+..|..+|++.+++.|.  .|.+.+...
T Consensus       291 ~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (467)
T COG5048         291 KSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPL  366 (467)
T ss_pred             CCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccc
Confidence            45678899999999999999  89999  999999  7999999999999999999999988774  344444433

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.45  E-value=0.015  Score=35.21  Aligned_cols=30  Identities=10%  Similarity=0.149  Sum_probs=21.2

Q ss_pred             hcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           54 HRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        54 H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +..+.|-.|++|+..+.+..+|++|+.+.+
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHh
Confidence            345688899999999999999999998743

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=93.16  E-value=0.019  Score=29.13  Aligned_cols=22  Identities=18%  Similarity=0.096  Sum_probs=20.0

Q ss_pred             ccCCCCCCCCCCCchhHHHHHh
Q 037433           60 KAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        60 ~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      |.|.+|.+.|.....|+.|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            6799999999999999999874

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.42  E-value=0.026  Score=29.38  Aligned_cols=22  Identities=14%  Similarity=0.064  Sum_probs=20.0

Q ss_pred             ccCCCCCCCCCCCchhHHHHHh
Q 037433           60 KAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        60 ~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      |.|..|++.|.....+..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.50  E-value=0.17  Score=27.67  Aligned_cols=23  Identities=22%  Similarity=0.625  Sum_probs=18.6

Q ss_pred             ceeCCcccccCCChHHHHHhHHh
Q 037433           31 SYECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      +|.|.+|++.|....++..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788899888888888888753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.36  E-value=0.25  Score=27.06  Aligned_cols=24  Identities=17%  Similarity=0.398  Sum_probs=13.2

Q ss_pred             eeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCC
Q 037433           32 YECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGP   67 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k   67 (181)
                      |.|..||..+.-..            .++.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            56666765443221            5666666653

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=89.20  E-value=0.22  Score=48.43  Aligned_cols=56  Identities=23%  Similarity=0.291  Sum_probs=47.5

Q ss_pred             cCCCcceeCCcccccCCChHHHHHhHHh-h------------------------cCCCCccCCCCCCCCCCCchhHHHHH
Q 037433           26 SSAKRSYECTFCKRGFTNAQALGGHMNI-H------------------------RKDRAKAKQTTGPSFITSNPMLTHED   80 (181)
Q Consensus        26 h~~~kp~~C~~C~k~F~~~~~L~~H~~~-H------------------------~gekp~~C~~C~k~F~~~~~L~~H~~   80 (181)
                      |.-.|-|+|..|+..|+....|..|||. |                        .+-++|.|..|..++..+.+|..|++
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            4556889999999999999999999997 1                        02478999999999999999999976


Q ss_pred             h
Q 037433           81 Y   81 (181)
Q Consensus        81 ~   81 (181)
                      .
T Consensus       540 S  540 (1406)
T KOG1146|consen  540 S  540 (1406)
T ss_pred             H
Confidence            3

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=88.79  E-value=2  Score=34.91  Aligned_cols=76  Identities=13%  Similarity=0.091  Sum_probs=45.8

Q ss_pred             cCCCcceeCCcccccCCChHHHHHhHHh--hcCCCCccCCCCCCCCCCC------chhHHHHHh------cCCCCCCCCC
Q 037433           26 SSAKRSYECTFCKRGFTNAQALGGHMNI--HRKDRAKAKQTTGPSFITS------NPMLTHEDY------MNPRYIAPIS   91 (181)
Q Consensus        26 h~~~kp~~C~~C~k~F~~~~~L~~H~~~--H~gekp~~C~~C~k~F~~~------~~L~~H~~~------~~~~~~c~~~   91 (181)
                      ..|.|-|.|.+|.. |.-...-..|+..  -.-...|+|..|++.=.+.      .....|.+.      ..+++.||-|
T Consensus       137 ~hGGrif~CsfC~~-flCEDDQFEHQAsCQvLe~E~~KC~SCNrlGq~sCLRCK~cfCddHvrrKg~ky~k~k~~PCPKC  215 (314)
T PF06524_consen  137 DHGGRIFKCSFCDN-FLCEDDQFEHQASCQVLESETFKCQSCNRLGQYSCLRCKICFCDDHVRRKGFKYEKGKPIPCPKC  215 (314)
T ss_pred             cCCCeEEEeecCCC-eeeccchhhhhhhhhhhhcccccccccccccchhhhheeeeehhhhhhhcccccccCCCCCCCCC
Confidence            35678899999975 4444444467653  2233568888887532111      112345443      4577889999


Q ss_pred             CCCCCCCCchh
Q 037433           92 SDTSRHSPVFE  102 (181)
Q Consensus        92 ~~~~~~~~~~~  102 (181)
                      ++.....-.+.
T Consensus       216 g~et~eTkdLS  226 (314)
T PF06524_consen  216 GYETQETKDLS  226 (314)
T ss_pred             CCcccccccce
Confidence            98876544444

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>smart00451 ZnF_U1 U1-like zinc finger

Probab=87.73  E-value=0.27  Score=26.80  Aligned_cols=23  Identities=9%  Similarity=-0.065  Sum_probs=20.2

Q ss_pred             CccCCCCCCCCCCCchhHHHHHh
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      +|.|..|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57899999999998888888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PRK04860 hypothetical protein; Provisional

Probab=84.64  E-value=0.66  Score=35.05  Aligned_cols=33  Identities=9%  Similarity=-0.030  Sum_probs=26.7

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCCCCC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPISSDT   94 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~   94 (181)
                      -+|.|. |++   ....+.+|.++  +.++|.|..|.-.
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~  152 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGET  152 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCce
Confidence            368998 987   67778999998  4778999999844

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=83.80  E-value=0.75  Score=37.13  Aligned_cols=47  Identities=19%  Similarity=0.332  Sum_probs=31.4

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHH
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHED   80 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~   80 (181)
                      -|.|..||....... +-+|+..-++ .-|.|--|++.|.. ..++.|..
T Consensus         3 ~FtCnvCgEsvKKp~-vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKKPQ-VEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhccccc-hHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            367778877655444 5667776666 56778888888877 45566654

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=83.71  E-value=0.33  Score=38.36  Aligned_cols=44  Identities=11%  Similarity=0.314  Sum_probs=27.7

Q ss_pred             CcceeCCcccccCCChHHHHHhHHh----------hcCCCCc-----cCCCCCCCCCCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNI----------HRKDRAK-----AKQTTGPSFITS   72 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~----------H~gekp~-----~C~~C~k~F~~~   72 (181)
                      ++...|++|++.|.......+..++          ..+..|+     .|+.||.+|...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            3567899999998887666555543          1123332     577777766543

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=82.39  E-value=0.38  Score=37.72  Aligned_cols=70  Identities=20%  Similarity=0.276  Sum_probs=50.2

Q ss_pred             CCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHH----------hhcCCCCccC--CCCCCCCCCCchhH
Q 037433            9 GSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMN----------IHRKDRAKAK--QTTGPSFITSNPML   76 (181)
Q Consensus         9 c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~----------~H~gekp~~C--~~C~k~F~~~~~L~   76 (181)
                      |...|..-.+...|..+..+.   .|.+|.+.|.+..-|..|+.          +-+|.--|.|  ..|+-.|.+....+
T Consensus        87 c~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~Rk  163 (253)
T KOG4173|consen   87 CCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRK  163 (253)
T ss_pred             hHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhh
Confidence            444444444455555443332   69999999999999999974          2346566899  57999999998888


Q ss_pred             HHHHh
Q 037433           77 THEDY   81 (181)
Q Consensus        77 ~H~~~   81 (181)
                      .|+-.
T Consensus       164 dH~I~  168 (253)
T KOG4173|consen  164 DHMIR  168 (253)
T ss_pred             hHHHH
Confidence            99865

>smart00531 TFIIE Transcription initiation factor IIE

Probab=81.37  E-value=1.7  Score=32.15  Aligned_cols=36  Identities=19%  Similarity=0.300  Sum_probs=17.1

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPS   68 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~   68 (181)
                      ..-|.|+.|+..|+...++..   ... ..-|.|+.||..
T Consensus        97 ~~~Y~Cp~C~~~y~~~ea~~~---~d~-~~~f~Cp~Cg~~  132 (147)
T smart00531       97 NAYYKCPNCQSKYTFLEANQL---LDM-DGTFTCPRCGEE  132 (147)
T ss_pred             CcEEECcCCCCEeeHHHHHHh---cCC-CCcEECCCCCCE
Confidence            345666666666654443321   011 222666666544

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=81.02  E-value=2  Score=32.34  Aligned_cols=33  Identities=15%  Similarity=0.108  Sum_probs=18.6

Q ss_pred             CCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCC
Q 037433           27 SAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPS   68 (181)
Q Consensus        27 ~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~   68 (181)
                      +...-|.|+.|+..|+...++.         --|.|+.||..
T Consensus       105 ~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~  137 (158)
T TIGR00373       105 TNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAM  137 (158)
T ss_pred             cCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCE
Confidence            3444566666666666666553         24666666654

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=80.53  E-value=0.36  Score=36.23  Aligned_cols=14  Identities=21%  Similarity=0.268  Sum_probs=9.5

Q ss_pred             ccCCCCCCCCCCCc
Q 037433           60 KAKQTTGPSFITSN   73 (181)
Q Consensus        60 ~~C~~C~k~F~~~~   73 (181)
                      ++|+.||++|...-
T Consensus        29 ~~c~~c~~~f~~~e   42 (154)
T PRK00464         29 RECLACGKRFTTFE   42 (154)
T ss_pred             eeccccCCcceEeE
Confidence            67777777776543

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=80.22  E-value=0.79  Score=38.73  Aligned_cols=73  Identities=14%  Similarity=0.118  Sum_probs=43.0

Q ss_pred             hHHHHhhhcCCCcceeCCccc---ccCC------ChHHHHHhHHhhcCCCCc----cCCCCCCCCCCCchhHHHHHh-cC
Q 037433           18 NEVKELDTSSAKRSYECTFCK---RGFT------NAQALGGHMNIHRKDRAK----AKQTTGPSFITSNPMLTHEDY-MN   83 (181)
Q Consensus        18 ~L~~h~~~h~~~kp~~C~~C~---k~F~------~~~~L~~H~~~H~gekp~----~C~~C~k~F~~~~~L~~H~~~-~~   83 (181)
                      .|..|..+..+  .+.|..|-   +.|.      +...|..|+..-..+.-|    .|..|...|-.-+.|.+|+|. |+
T Consensus       168 ~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE  245 (493)
T COG5236         168 ELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHE  245 (493)
T ss_pred             HHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccceecChHHHHHHHHhhhh
Confidence            45566555443  24455443   2332      233366666543333222    588888888888888888886 77


Q ss_pred             CCCCCCCCC
Q 037433           84 PRYIAPISS   92 (181)
Q Consensus        84 ~~~~c~~~~   92 (181)
                      +-|+|.+-+
T Consensus       246 ~ChICD~v~  254 (493)
T COG5236         246 ACHICDMVG  254 (493)
T ss_pred             hhhhhhccC
Confidence            777776655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	181
2l1o_A	39	Zinc To Cadmium Replacement In The A. Thaliana Supe		3e-06

>pdb|2L1O|A Chain A, Zinc To Cadmium Replacement In The A. Thaliana Superman Cys2his2 Zinc Finger Induces Structural Rearrangements Of Typical Dna Base Determinant Positions Length = 39

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 22/25 (88%)
Query: 30 RSYECTFCKRGFTNAQALGGHMNIH 54
          RSY C+FCKR F +AQALGGHMN+H
Sbjct: 5  RSYTCSFCKREFRSAQALGGHMNVH 29

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	181
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	1e-17
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 71.7 bits (176), Expect = 1e-17
 Identities = 23/33 (69%), Positives = 29/33 (87%)

Query: 30 RSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK 62
          RSY C+FCKR F +AQALGGHMN+HR+DRA+ +
Sbjct: 5  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 37

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 5e-06
 Identities = 29/191 (15%), Positives = 52/191 (27%), Gaps = 54/191 (28%)

Query: 1   MDSSQKQVGSDHSSSD------ENEVKELDTSSAKRSYECTFCKRGFTNAQA---LGGHM 51
           MD    +    +   D      +  V   D    +        K   +  +    +    
Sbjct: 7   MDFETGEH--QYQYKDILSVFEDAFVDNFDCKDVQ-----DMPKSILSKEEIDHIIMSKD 59

Query: 52  NIHRKDRA----KAKQTTG-PSFITSNPMLTHEDYMNPRY------IAPISSDTSRHSPV 100
            +    R      +KQ      F+        E+ +   Y      I       S  + +
Sbjct: 60  AVSGTLRLFWTLLSKQEEMVQKFV--------EEVLRINYKFLMSPIKTEQRQPSMMTRM 111

Query: 101 FESQRNYLRYYQPSASNPGNP-PDYNVPRSESLSMMNEDQLL----GANLSL----GIGP 151
           +  QR+ L        N       YNV R +    + +  LL      N+ +    G G 
Sbjct: 112 YIEQRDRLY-------NDNQVFAKYNVSRLQPYLKLRQ-ALLELRPAKNVLIDGVLGSGK 163

Query: 152 SCVGEDNEVMR 162
           + V    +V  
Sbjct: 164 TWVA--LDVCL 172

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	181
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.8
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.73
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.72
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.72
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.71
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.71
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.71
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.69
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.68
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.67
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.67
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.66
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.66
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.66
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.65
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.65
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.65
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.65
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.64
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.63
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.62
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.62
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.61
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.61
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.61
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.61
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.59
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.59
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.58
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.58
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.57
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.57
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.57
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.57
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.56
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.56
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.55
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.55
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.55
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.53
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.52
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.51
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.5
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.5
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.5
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.47
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.46
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.46
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.46
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.45
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.43
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.43
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.41
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.4
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.4
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.4
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.4
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.4
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.39
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.39
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.38
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.38
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.38
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.38
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.38
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.38
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.37
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.35
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.35
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.34
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.33
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.32
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.31
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.31
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.3
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.29
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.28
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.27
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.27
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.26
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.26
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.25
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.25
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.25
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.25
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.24
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.22
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.21
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.21
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.21
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.19
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.19
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.15
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.15
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.11
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.09
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.01
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.0
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.99
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.98
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.96
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.96
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.93
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.91
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.9
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.9
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.89
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.88
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.87
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.87
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.85
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.85
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.83
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.83
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.82
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.79
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.79
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.79
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.77
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.77
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.73
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.69
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.69
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.68
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.68
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.64
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.62
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.59
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.57
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.55
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.53
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.53
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.5
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.49
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.48
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.46
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.44
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.43
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.41
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.4
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.38
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.38
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.37
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.36
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.35
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.34
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.67
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.32
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.67
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.32
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.32
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.31
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.29
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.25
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.24
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.18
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.08
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.35
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.07
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.05
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.04
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.01
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.99
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.97
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.21
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.95
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.93
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.87
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.86
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.85
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.85
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.82
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.8
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.78
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.97
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.9
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.71
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.7
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.64
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.59
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.57
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.48
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.42
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.08
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.71
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.59
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.7
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.78
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.04
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	89.69
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	87.8
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	87.77
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	83.54
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	82.87
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	82.62
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	82.22
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	82.13
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	81.08

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.80  E-value=1.2e-20  Score=137.40  Aligned_cols=87  Identities=20%  Similarity=0.231  Sum_probs=80.4

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC---
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN---   83 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~---   83 (181)
                      ++|+++|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|++.|.+...|..|+++++   
T Consensus        26 ~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           26 IVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQD  105 (133)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCC
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999853   


Q ss_pred             -----CCCCCCCCCC
Q 037433           84 -----PRYIAPISSD   93 (181)
Q Consensus        84 -----~~~~c~~~~~   93 (181)
                           +.|.|.+|+.
T Consensus       106 p~~~~k~~~C~~C~k  120 (133)
T 2lt7_A          106 PSGDSKLYRLHPCRS  120 (133)
T ss_dssp             TTSSSCCEEECCCCS
T ss_pred             CCCCCCCeecCCCCc
Confidence                 3467888864

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.74  E-value=7.5e-19  Score=123.56  Aligned_cols=99  Identities=15%  Similarity=0.192  Sum_probs=89.3

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCC--cccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--c
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECT--FCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--M   82 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~--~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~   82 (181)
                      +.|++.|.....|..|+++|.++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++  +
T Consensus        12 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (119)
T 2jp9_A           12 PGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG   91 (119)
T ss_dssp             TTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred             CCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcC
Confidence            35999999999999999999999999999  6999999999999999999999999999999999999999999998  4


Q ss_pred             CCCCCC--CCCCCCCCCCCchhhhc
Q 037433           83 NPRYIA--PISSDTSRHSPVFESQR  105 (181)
Q Consensus        83 ~~~~~c--~~~~~~~~~~~~~~~~~  105 (181)
                      .++|.|  +.|+........+..|+
T Consensus        92 ~~~~~C~~~~C~~~f~~~~~L~~H~  116 (119)
T 2jp9_A           92 EKPFSCRWPSCQKKFARSDELVRHH  116 (119)
T ss_dssp             CCCEECCSTTCCCEESSHHHHHHHH
T ss_pred             CCCeeCCCCCCccccCCHHHHHHHH
Confidence            677999  89997776555555544

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.73  E-value=1.6e-18  Score=109.52  Aligned_cols=56  Identities=21%  Similarity=0.428  Sum_probs=53.9

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      ||||.|.+|++.|.....|..|+++|+++|||.|..|+++|.+.+.|..|+++|..
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence            79999999999999999999999999999999999999999999999999999753

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.72  E-value=8e-18  Score=119.34  Aligned_cols=100  Identities=18%  Similarity=0.233  Sum_probs=91.2

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC--CCCCCCCCchhHHHHHh--c
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT--TGPSFITSNPMLTHEDY--M   82 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~--~   82 (181)
                      ..|++.|.+...|..|+++| +.++|.|.+|++.|.....|..|+++|+++++|.|..  |++.|.....|..|+++  +
T Consensus        11 ~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   89 (124)
T 1ubd_C           11 KGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   89 (124)
T ss_dssp             TTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            37999999999999999999 8899999999999999999999999999999999986  99999999999999998  4


Q ss_pred             CCCCCCCC--CCCCCCCCCchhhhccc
Q 037433           83 NPRYIAPI--SSDTSRHSPVFESQRNY  107 (181)
Q Consensus        83 ~~~~~c~~--~~~~~~~~~~~~~~~~~  107 (181)
                      .++|.|++  |+........+..|+..
T Consensus        90 ~~~~~C~~~~C~~~f~~~~~L~~H~~~  116 (124)
T 1ubd_C           90 DRPYVCPFDGCNKKFAQSTNLKSHILT  116 (124)
T ss_dssp             CCCCCCCSTTCCCCCSSTTTTHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHH
Confidence            67899975  99888887777777653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=2.4e-18  Score=121.65  Aligned_cols=100  Identities=12%  Similarity=0.091  Sum_probs=90.4

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHh---hcCCCCccCCCCCCCCCCCchhHHHHHhc-
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNI---HRKDRAKAKQTTGPSFITSNPMLTHEDYM-   82 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~---H~gekp~~C~~C~k~F~~~~~L~~H~~~~-   82 (181)
                      +.|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.   |.++++|.|..|++.|.....|..|+++| 
T Consensus        11 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   90 (124)
T 2dlq_A           11 PTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHT   90 (124)
T ss_dssp             TTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             CCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999999999999985   68899999999999999999999999984 


Q ss_pred             -CCCCCCCCCCCCCCCCCchhhhcc
Q 037433           83 -NPRYIAPISSDTSRHSPVFESQRN  106 (181)
Q Consensus        83 -~~~~~c~~~~~~~~~~~~~~~~~~  106 (181)
                       .++|.|++|+........+..|+.
T Consensus        91 ~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           91 GEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             SSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCccCCCccchhCCHHHHHHHHH
Confidence             577999999988776666666653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.72  E-value=1.4e-17  Score=115.01  Aligned_cols=78  Identities=23%  Similarity=0.398  Sum_probs=71.8

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      +.|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++|..
T Consensus        21 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   98 (106)
T 2ee8_A           21 KFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ   98 (106)
T ss_dssp             SSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred             CCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence            468999999999999999999999999999999999999999999999999999999999999999999999998543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.71  E-value=4.5e-18  Score=111.94  Aligned_cols=77  Identities=21%  Similarity=0.391  Sum_probs=74.3

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +.|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.+...|..|+++|.
T Consensus         5 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A            5 KICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             SSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred             CCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999864

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.71  E-value=2.6e-18  Score=130.64  Aligned_cols=100  Identities=17%  Similarity=0.285  Sum_probs=67.3

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNP   84 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~   84 (181)
                      +.|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++  +.+
T Consensus        81 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  160 (190)
T 2i13_A           81 PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK  160 (190)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCC
T ss_pred             cccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            356667777777777777777777777777777777777777777777777777777777777777777777766  345


Q ss_pred             CCCCCCCCCCCCCCCchhhhcc
Q 037433           85 RYIAPISSDTSRHSPVFESQRN  106 (181)
Q Consensus        85 ~~~c~~~~~~~~~~~~~~~~~~  106 (181)
                      +|.|++|+........+..|+.
T Consensus       161 ~~~C~~C~~~f~~~~~L~~H~~  182 (190)
T 2i13_A          161 PYKCPECGKSFSRRDALNVHQR  182 (190)
T ss_dssp             CEECTTTCCEESSHHHHHHHHT
T ss_pred             CeECCCCCCccCCHHHHHHHHH
Confidence            6677777766555444555543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.71  E-value=5.1e-18  Score=113.71  Aligned_cols=78  Identities=17%  Similarity=0.349  Sum_probs=74.5

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      +.|+++|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++|..
T Consensus        10 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~   87 (90)
T 1a1h_A           10 ESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR   87 (90)
T ss_dssp             SSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC
T ss_pred             CCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            369999999999999999999999999999999999999999999999999999999999999999999999998653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.6e-17  Score=112.71  Aligned_cols=79  Identities=16%  Similarity=0.251  Sum_probs=74.1

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPR   85 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~~   85 (181)
                      +.|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++|+..
T Consensus        12 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   90 (96)
T 2dmd_A           12 EVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGD   90 (96)
T ss_dssp             TTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCC
Confidence            5799999999999999999999999999999999999999999999999999999999999999999999999986543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.69  E-value=3.3e-17  Score=111.79  Aligned_cols=77  Identities=18%  Similarity=0.257  Sum_probs=73.3

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCC--cccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECT--FCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~--~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +.|++.|.....|..|+++|+++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++|.
T Consensus        21 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           21 PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             SSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred             CCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhC
Confidence            35999999999999999999999999996  599999999999999999999999999999999999999999999874

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.68  E-value=2e-18  Score=125.59  Aligned_cols=89  Identities=18%  Similarity=0.191  Sum_probs=80.3

Q ss_pred             HHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCCCCCCC
Q 037433           19 EVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPISSDTSR   96 (181)
Q Consensus        19 L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~~~   96 (181)
                      +..|..+|+|+++|.|.+|++.|.....|..|+++|++++||.|..|++.|.+...|..|+++  +.++|.|++|+....
T Consensus        10 ~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~   89 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFI   89 (133)
T ss_dssp             SSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEES
T ss_pred             HhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcC
Confidence            445678899999999999999999999999999999999999999999999999999999998  478899999998887


Q ss_pred             CCCchhhhccc
Q 037433           97 HSPVFESQRNY  107 (181)
Q Consensus        97 ~~~~~~~~~~~  107 (181)
                      ....+..|+..
T Consensus        90 ~~~~L~~H~~~  100 (133)
T 2lt7_A           90 NYQFMSSHIKS  100 (133)
T ss_dssp             SHHHHHHHHHH
T ss_pred             CHHHHHHHhHH
Confidence            76677777654

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.67  E-value=3e-17  Score=109.68  Aligned_cols=76  Identities=18%  Similarity=0.260  Sum_probs=72.8

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCC--cccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECT--FCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~--~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      +.|++.|.....|..|+++|+++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++|
T Consensus        11 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           11 AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             TTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            45999999999999999999999999997  59999999999999999999999999999999999999999999876

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=9.3e-17  Score=108.66  Aligned_cols=75  Identities=15%  Similarity=0.243  Sum_probs=69.9

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCC--CCccCCCCCCCCCCCchhHHHHHh
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKD--RAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~ge--kp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      +.|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+++  ++|.|..|++.|.....|..|++.
T Consensus        11 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~   87 (95)
T 2yt9_A           11 EICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQ   87 (95)
T ss_dssp             SSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHH
T ss_pred             CCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999987  899999999999999999999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=4.3e-17  Score=119.64  Aligned_cols=99  Identities=16%  Similarity=0.203  Sum_probs=53.8

Q ss_pred             CCCCCCCCCchhHHHHhh---hcCCCcceeCCcc-----cccCCChHHHHHhHHhhcCCCCccCCC--CCCCCCCCchhH
Q 037433            7 QVGSDHSSSDENEVKELD---TSSAKRSYECTFC-----KRGFTNAQALGGHMNIHRKDRAKAKQT--TGPSFITSNPML   76 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~---~h~~~kp~~C~~C-----~k~F~~~~~L~~H~~~H~gekp~~C~~--C~k~F~~~~~L~   76 (181)
                      +.|++.|.+...|..|++   +|+++++|.|.+|     ++.|.....|..|+++|+++++|.|..  |++.|.+...|.
T Consensus         7 ~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   86 (155)
T 2gli_A            7 DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLK   86 (155)
T ss_dssp             TTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHH
T ss_pred             CCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHH
Confidence            345555555555555555   4555555555432     255555555555555555555555553  555555555555


Q ss_pred             HHHHhc--CCCCCCCC--CCCCCCCCCchhhhc
Q 037433           77 THEDYM--NPRYIAPI--SSDTSRHSPVFESQR  105 (181)
Q Consensus        77 ~H~~~~--~~~~~c~~--~~~~~~~~~~~~~~~  105 (181)
                      .|++++  .++|.|++  |+........+..|+
T Consensus        87 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~  119 (155)
T 2gli_A           87 THLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQ  119 (155)
T ss_dssp             HHHHHTTTCCCEECCSTTCCCEESSSSTTHHHH
T ss_pred             HHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHH
Confidence            555552  34455555  555554444444443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.5e-17  Score=115.82  Aligned_cols=79  Identities=18%  Similarity=0.311  Sum_probs=69.7

Q ss_pred             CCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCCCC
Q 037433            8 VGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRY   86 (181)
Q Consensus         8 ~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~~~   86 (181)
                      .|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|++++++.+
T Consensus        14 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   92 (110)
T 2csh_A           14 QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSY   92 (110)
T ss_dssp             TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHHHH
T ss_pred             cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccccc
Confidence            5888899988999999999988999999999999999999999999999999999999999999999999988866655

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.66  E-value=2.3e-17  Score=125.37  Aligned_cols=90  Identities=17%  Similarity=0.321  Sum_probs=43.7

Q ss_pred             CCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCC
Q 037433            8 VGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPR   85 (181)
Q Consensus         8 ~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~   85 (181)
                      .|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++  ..++
T Consensus        26 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  105 (190)
T 2i13_A           26 ECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKP  105 (190)
T ss_dssp             -----CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCC
T ss_pred             CCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCC
Confidence            45555555555555555555555555555555555555555555555555555555555555555555555554  2344


Q ss_pred             CCCCCCCCCCCC
Q 037433           86 YIAPISSDTSRH   97 (181)
Q Consensus        86 ~~c~~~~~~~~~   97 (181)
                      |.|++|+.....
T Consensus       106 ~~C~~C~~~f~~  117 (190)
T 2i13_A          106 YACPECGKSFSQ  117 (190)
T ss_dssp             EECTTTCCEESS
T ss_pred             CcCCCCCCccCC
Confidence            555555544433

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.65  E-value=1.1e-16  Score=121.53  Aligned_cols=101  Identities=15%  Similarity=0.193  Sum_probs=72.7

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCC--cccccCCChHHHHHhH-Hhh-cCCCCccC--CCCCCCCCCCchhHHHHH
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECT--FCKRGFTNAQALGGHM-NIH-RKDRAKAK--QTTGPSFITSNPMLTHED   80 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~--~C~k~F~~~~~L~~H~-~~H-~gekp~~C--~~C~k~F~~~~~L~~H~~   80 (181)
                      +.|+++|.....|..|+++|+++++|.|.  .|++.|.....|..|+ ++| .++++|.|  ..|++.|.....|..|++
T Consensus        48 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~  127 (190)
T 1tf6_A           48 EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF  127 (190)
T ss_dssp             TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG
T ss_pred             CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH
Confidence            56777777777777777777777777777  6777777777777777 556 46677777  677777777777777777


Q ss_pred             hc--CCCCCCCC--CCCCCCCCCchhhhccc
Q 037433           81 YM--NPRYIAPI--SSDTSRHSPVFESQRNY  107 (181)
Q Consensus        81 ~~--~~~~~c~~--~~~~~~~~~~~~~~~~~  107 (181)
                      +|  .++|.|++  |+........+..|+..
T Consensus       128 ~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~  158 (190)
T 1tf6_A          128 SHTQQLPYECPHEGCDKRFSLPSRLKRHEKV  158 (190)
T ss_dssp             GGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS
T ss_pred             HhCCCCCccCCCCCCCchhcCHHHHHHHHHH
Confidence            63  45677766  77666655556555543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.65  E-value=8.4e-17  Score=118.36  Aligned_cols=101  Identities=13%  Similarity=0.133  Sum_probs=89.7

Q ss_pred             CCCCCCCCCchhHHHHhhh-cCCCcc--------eeCCcccccCCChHHHHHhHHhhcCCCCccCCC--CCCCCCCCchh
Q 037433            7 QVGSDHSSSDENEVKELDT-SSAKRS--------YECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT--TGPSFITSNPM   75 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~-h~~~kp--------~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~--C~k~F~~~~~L   75 (181)
                      ..|++.|.+...|..|+++ |.++++        |.|.+|++.|.....|..|+++|+++++|.|..  |++.|.....|
T Consensus        29 ~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L  108 (155)
T 2rpc_A           29 KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENL  108 (155)
T ss_dssp             CCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHH
T ss_pred             ccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHH
Confidence            4699999999999999997 877765        899999999999999999999999999999998  99999999999


Q ss_pred             HHHHHhc--CCCCCCCC--CCCCCCCCCchhhhccc
Q 037433           76 LTHEDYM--NPRYIAPI--SSDTSRHSPVFESQRNY  107 (181)
Q Consensus        76 ~~H~~~~--~~~~~c~~--~~~~~~~~~~~~~~~~~  107 (181)
                      ..|+++|  .++|.|++  |+........+..|+..
T Consensus       109 ~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~  144 (155)
T 2rpc_A          109 KIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV  144 (155)
T ss_dssp             HHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT
T ss_pred             HHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH
Confidence            9999984  56899998  99887766666666653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=8.5e-17  Score=110.46  Aligned_cols=76  Identities=17%  Similarity=0.134  Sum_probs=70.2

Q ss_pred             CCCCCCCchhHHHHhhhcCCCcceeCCcccccCC-ChHHHHHhHHhhcC-CCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433            9 GSDHSSSDENEVKELDTSSAKRSYECTFCKRGFT-NAQALGGHMNIHRK-DRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus         9 c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~-~~~~L~~H~~~H~g-ekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      ++.++.....+..|+++|+++++|.|.+|++.|. ....|..|+++|++ +++|.|.+|++.|.+...|+.|+++++.
T Consensus         2 ss~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            2 SSGSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCCCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence            3456777788899999999999999999999999 99999999999999 9999999999999999999999998654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.65  E-value=5.5e-17  Score=113.91  Aligned_cols=75  Identities=15%  Similarity=0.331  Sum_probs=72.8

Q ss_pred             CCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccC--CCCCCCCCCCchhHHHHHhc
Q 037433            8 VGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK--QTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus         8 ~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C--~~C~k~F~~~~~L~~H~~~~   82 (181)
                      .|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|  ..|++.|.+...|..|+++|
T Consensus        43 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           43 DCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             TCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            6999999999999999999999999999999999999999999999999999999  89999999999999999874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=4e-17  Score=114.48  Aligned_cols=93  Identities=12%  Similarity=0.110  Sum_probs=81.6

Q ss_pred             CchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHh--hcCCCCcc-CCCCCCCC--CCCchhHHHHHhc--CCCCC
Q 037433           15 SDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNI--HRKDRAKA-KQTTGPSF--ITSNPMLTHEDYM--NPRYI   87 (181)
Q Consensus        15 ~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~--H~gekp~~-C~~C~k~F--~~~~~L~~H~~~~--~~~~~   87 (181)
                      ..+.|..|+++|+++++|.|.+|++.|.....|..|+++  |.+++++. |..|++.|  .....|..|+++|  .++|.
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            346788999999999999999999999999999999999  88888764 99999999  8999999999884  67899


Q ss_pred             CCCCCCCCCCCCchhhhccc
Q 037433           88 APISSDTSRHSPVFESQRNY  107 (181)
Q Consensus        88 c~~~~~~~~~~~~~~~~~~~  107 (181)
                      |++|+........+..|+..
T Consensus        83 C~~C~k~f~~~~~L~~H~~~  102 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIK  102 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHH
Confidence            99999888777777777654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.63  E-value=1.6e-16  Score=116.81  Aligned_cols=83  Identities=13%  Similarity=0.225  Sum_probs=77.1

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCc--ccccCCChHHHHHhHHhhcCCCCccCCC--CCCCCCCCchhHHHHHhc
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTF--CKRGFTNAQALGGHMNIHRKDRAKAKQT--TGPSFITSNPMLTHEDYM   82 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~--C~k~F~~~~~L~~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~~   82 (181)
                      +.|++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|..  |++.|.+...|..|+++|
T Consensus        66 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H  145 (155)
T 2rpc_A           66 PREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH  145 (155)
T ss_dssp             TTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTT
T ss_pred             CCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHh
Confidence            568999999999999999999999999998  9999999999999999999999999997  999999999999999984


Q ss_pred             --CCCCCCC
Q 037433           83 --NPRYIAP   89 (181)
Q Consensus        83 --~~~~~c~   89 (181)
                        .++|.|.
T Consensus       146 ~~~k~~~c~  154 (155)
T 2rpc_A          146 TSDKSGPSS  154 (155)
T ss_dssp             TSCCCSCSC
T ss_pred             cCCCCCCCC
Confidence              4667553

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.62  E-value=7e-16  Score=109.21  Aligned_cols=78  Identities=18%  Similarity=0.267  Sum_probs=73.3

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCc--ccccCCChHHHHHhHHhhcCCCCccCC--CCCCCCCCCchhHHHHHhc
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTF--CKRGFTNAQALGGHMNIHRKDRAKAKQ--TTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~--C~k~F~~~~~L~~H~~~H~gekp~~C~--~C~k~F~~~~~L~~H~~~~   82 (181)
                      +.|++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|.  .|++.|.+...|..|+++|
T Consensus        38 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  117 (124)
T 1ubd_C           38 AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH  117 (124)
T ss_dssp             TTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHH
Confidence            579999999999999999999999999986  999999999999999999999999996  5999999999999999986


Q ss_pred             CC
Q 037433           83 NP   84 (181)
Q Consensus        83 ~~   84 (181)
                      ..
T Consensus       118 ~~  119 (124)
T 1ubd_C          118 AK  119 (124)
T ss_dssp             C-
T ss_pred             cc
Confidence            54

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.62  E-value=3.8e-16  Score=118.57  Aligned_cols=101  Identities=14%  Similarity=0.197  Sum_probs=75.6

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeC--CcccccCCChHHHHHhHHhhcCCCCccCC--CCCCCCCCCchhHHHHH-h
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYEC--TFCKRGFTNAQALGGHMNIHRKDRAKAKQ--TTGPSFITSNPMLTHED-Y   81 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C--~~C~k~F~~~~~L~~H~~~H~gekp~~C~--~C~k~F~~~~~L~~H~~-~   81 (181)
                      +.|+++|.....|..|+++|+++++|.|  ..|++.|.....|..|+++|.++++|.|.  .|++.|.+...|..|++ .
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~   97 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF   97 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTT
T ss_pred             CCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHh
Confidence            4677888888888888888888888888  67888888888888888888888888887  78888888888888873 3


Q ss_pred             c---CCCCCC--CCCCCCCCCCCchhhhccc
Q 037433           82 M---NPRYIA--PISSDTSRHSPVFESQRNY  107 (181)
Q Consensus        82 ~---~~~~~c--~~~~~~~~~~~~~~~~~~~  107 (181)
                      |   ..+|.|  ++|+........+..|+..
T Consensus        98 h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~  128 (190)
T 1tf6_A           98 HNIKICVYVCHFENCGKAFKKHNQLKVHQFS  128 (190)
T ss_dssp             SSTTTSCCEECSSSSCEECSSHHHHHHHHGG
T ss_pred             cCCCcceeeCCCCCCccccCCHHHHHHHHHH
Confidence            3   346777  7777766665556666543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.61  E-value=7.8e-16  Score=112.87  Aligned_cols=98  Identities=11%  Similarity=0.267  Sum_probs=86.9

Q ss_pred             CCCCCCCCchhHHHHhhhcCCCcceeCCc--ccccCCChHHHHHhHHhhcCCCCccCCC--CCCCCCCCchhHHHH-Hh-
Q 037433            8 VGSDHSSSDENEVKELDTSSAKRSYECTF--CKRGFTNAQALGGHMNIHRKDRAKAKQT--TGPSFITSNPMLTHE-DY-   81 (181)
Q Consensus         8 ~c~~sf~~~s~L~~h~~~h~~~kp~~C~~--C~k~F~~~~~L~~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~-~~-   81 (181)
                      .|++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|..  |++.|.+...|..|+ ++ 
T Consensus        44 ~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H  123 (155)
T 2gli_A           44 RELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH  123 (155)
T ss_dssp             TTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             chhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhc
Confidence            34599999999999999999999999986  9999999999999999999999999998  999999999999999 55 


Q ss_pred             -cCCCCCCCC--CCCCCCCCCchhhhc
Q 037433           82 -MNPRYIAPI--SSDTSRHSPVFESQR  105 (181)
Q Consensus        82 -~~~~~~c~~--~~~~~~~~~~~~~~~  105 (181)
                       ..++|.|++  |+........+..|+
T Consensus       124 ~~~~~~~C~~~~C~~~f~~~~~L~~H~  150 (155)
T 2gli_A          124 SNEKPYVCKLPGCTKRYTDPSSLRKHV  150 (155)
T ss_dssp             CSCCCEECCSTTTCCEESSHHHHHHHH
T ss_pred             CCCCCeeCCCCCCccccCCHHHHHHHH
Confidence             456799998  997776655555554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=5.7e-16  Score=101.35  Aligned_cols=61  Identities=21%  Similarity=0.335  Sum_probs=31.0

Q ss_pred             CCCCCCCchhHHHHhh-hcCCCcceeCCc--ccccCCChHHHHHhHHhhcCCCCccCCCCCCCC
Q 037433            9 GSDHSSSDENEVKELD-TSSAKRSYECTF--CKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSF   69 (181)
Q Consensus         9 c~~sf~~~s~L~~h~~-~h~~~kp~~C~~--C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F   69 (181)
                      |+++|.....|..|++ +|+++++|.|.+  |++.|.....|..|+++|+++++|.|..|+++|
T Consensus        15 C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             TCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4555555555555554 455555555544  555555555555555555555555555555444

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=1.6e-15  Score=104.08  Aligned_cols=73  Identities=18%  Similarity=0.102  Sum_probs=68.4

Q ss_pred             CCCCCCchhHHHHhhhcCCCcceeCCcccccC-CChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHH-HHhcC
Q 037433           10 SDHSSSDENEVKELDTSSAKRSYECTFCKRGF-TNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTH-EDYMN   83 (181)
Q Consensus        10 ~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F-~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H-~~~~~   83 (181)
                      ..++...+.|..|+++|+++++|.|..|++.| .....|..|+++| ++++|.|.+|++.|.....|+.| +++|.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence            45677888999999999999999999999999 9999999999999 99999999999999999999999 88764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=4.9e-16  Score=103.07  Aligned_cols=76  Identities=21%  Similarity=0.294  Sum_probs=67.7

Q ss_pred             hHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCC----CCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCCC
Q 037433           18 NEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKD----RAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPIS   91 (181)
Q Consensus        18 ~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~ge----kp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~~   91 (181)
                      .|.+|+++|+++++|.|.+|++.|.....|..|+++|..+    ++|.|..|++.|.....|..|++++  ..++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            4667999999999999999999999999999999987765    8999999999999999999999984  556778777


Q ss_pred             CC
Q 037433           92 SD   93 (181)
Q Consensus        92 ~~   93 (181)
                      ..
T Consensus        82 ~~   83 (86)
T 1x6h_A           82 GP   83 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            63

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=4.7e-16  Score=107.83  Aligned_cols=71  Identities=13%  Similarity=0.134  Sum_probs=59.3

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHH
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHED   80 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~   80 (181)
                      +.|++.|.....|..|+++|  .++|.|.+|++.|.....|..|++ |+++++|.|..|++.|.....|..|++
T Consensus        20 ~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~   90 (107)
T 1wjp_A           20 RLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQV   90 (107)
T ss_dssp             TTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHH
Confidence            46888888888888888887  368888888888888888888885 888888888888888888888888887

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.4e-15  Score=107.18  Aligned_cols=76  Identities=14%  Similarity=0.247  Sum_probs=72.0

Q ss_pred             CCCCCCCCCchhHHHHhhh---cCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc
Q 037433            7 QVGSDHSSSDENEVKELDT---SSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~---h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      +.|++.|.+...|..|+..   +.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.+...|..|++..
T Consensus        39 ~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  117 (124)
T 2dlq_A           39 PKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL  117 (124)
T ss_dssp             TTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHH
Confidence            5799999999999999985   688999999999999999999999999999999999999999999999999999863

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=5.6e-16  Score=100.15  Aligned_cols=61  Identities=18%  Similarity=0.423  Sum_probs=58.4

Q ss_pred             hhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           23 LDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        23 ~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      .++|+++++|.|.+|++.|.....|..|+++|+++++|+|..|++.|.....|..|+++|.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            5689999999999999999999999999999999999999999999999999999999864

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=3.6e-16  Score=102.25  Aligned_cols=67  Identities=16%  Similarity=0.237  Sum_probs=61.3

Q ss_pred             hHHHHhhhcCCCcceeCCcccccCCChHHHHHhHH-hhcCC-CCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           18 NEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMN-IHRKD-RAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        18 ~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~-~H~ge-kp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      .|.+|+++|+++++|.|.+|++.|.....|..|++ .|+++ ++|.|..|++.|.....|..|+++++.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            35678999999999999999999999999999997 68875 899999999999999999999998544

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=8.7e-16  Score=103.80  Aligned_cols=81  Identities=17%  Similarity=0.253  Sum_probs=72.4

Q ss_pred             cCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC----CCCCCCCCCCCCCCCCch
Q 037433           26 SSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN----PRYIAPISSDTSRHSPVF  101 (181)
Q Consensus        26 h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~----~~~~c~~~~~~~~~~~~~  101 (181)
                      .+++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|++++.    ++|.|++|+........+
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            3678999999999999999999999999999999999999999999999999999853    679999999887766666


Q ss_pred             hhhcc
Q 037433          102 ESQRN  106 (181)
Q Consensus       102 ~~~~~  106 (181)
                      ..|+.
T Consensus        82 ~~H~~   86 (95)
T 2yt9_A           82 NGHIK   86 (95)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=9.7e-16  Score=103.75  Aligned_cols=83  Identities=18%  Similarity=0.247  Sum_probs=74.0

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCCCCCCCCCCCchh
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPISSDTSRHSPVFE  102 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~~~~~~~~~~~~~  102 (181)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|..|++.|.....|..|++++  .++|.|++|+........+.
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            3567899999999999999999999999999999999999999999999999999984  56799999998877766676


Q ss_pred             hhccc
Q 037433          103 SQRNY  107 (181)
Q Consensus       103 ~~~~~  107 (181)
                      .|+..
T Consensus        82 ~H~~~   86 (96)
T 2dmd_A           82 VHLRS   86 (96)
T ss_dssp             HHHTT
T ss_pred             HHHHH
Confidence            66654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.5e-15  Score=97.49  Aligned_cols=61  Identities=18%  Similarity=0.198  Sum_probs=57.4

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCCC
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPR   85 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~~   85 (181)
                      +|+++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++++..
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence            5788999999999999999999999999999999999999999999999999999986543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.57  E-value=3.7e-15  Score=102.72  Aligned_cols=84  Identities=18%  Similarity=0.277  Sum_probs=74.5

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCCCCCCCCCCCchh
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPISSDTSRHSPVFE  102 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~~~~~~~~~~~~~  102 (181)
                      ....+++|.|.+|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|  .++|.|++|+........+.
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            3456789999999999999999999999999999999999999999999999999984  56799999998887766677


Q ss_pred             hhcccc
Q 037433          103 SQRNYL  108 (181)
Q Consensus       103 ~~~~~~  108 (181)
                      .|+...
T Consensus        91 ~H~~~H   96 (106)
T 2ee8_A           91 VHKTLH   96 (106)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            776543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.57  E-value=1.1e-15  Score=100.84  Aligned_cols=74  Identities=15%  Similarity=0.142  Sum_probs=70.0

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCc--ccccCCChHHHHHhHHhhcCCCCccCCC---CCCCCCCCchhHHHHHh
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTF--CKRGFTNAQALGGHMNIHRKDRAKAKQT---TGPSFITSNPMLTHEDY   81 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~--C~k~F~~~~~L~~H~~~H~gekp~~C~~---C~k~F~~~~~L~~H~~~   81 (181)
                      +.|+++|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|++   |.|..   |++.|.....|..|+++
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHh
Confidence            579999999999999999999999999988  99999999999999999998   99999   99999999999999987


Q ss_pred             cC
Q 037433           82 MN   83 (181)
Q Consensus        82 ~~   83 (181)
                      ++
T Consensus        84 hh   85 (85)
T 2j7j_A           84 CH   85 (85)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=8.4e-16  Score=107.63  Aligned_cols=78  Identities=9%  Similarity=-0.036  Sum_probs=72.1

Q ss_pred             CCCCCCCCCchhHHHHhhh--cCCCccee-CCcccccC--CChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh
Q 037433            7 QVGSDHSSSDENEVKELDT--SSAKRSYE-CTFCKRGF--TNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~--h~~~kp~~-C~~C~k~F--~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      +.|+++|.....|..|+++  |.+.+++. |.+|++.|  .....|..|+++|++++||.|..|++.|.....|..|+++
T Consensus        23 ~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~  102 (115)
T 2dmi_A           23 KDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK  102 (115)
T ss_dssp             SSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             CccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHH
Confidence            4799999999999999999  87777765 99999999  9999999999999999999999999999999999999998


Q ss_pred             cCC
Q 037433           82 MNP   84 (181)
Q Consensus        82 ~~~   84 (181)
                      ++.
T Consensus       103 hh~  105 (115)
T 2dmi_A          103 TKH  105 (115)
T ss_dssp             TTT
T ss_pred             hCC
Confidence            543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.56  E-value=1.5e-15  Score=95.76  Aligned_cols=53  Identities=13%  Similarity=0.298  Sum_probs=49.8

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRA   59 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp   59 (181)
                      ++|+++|...+.|..|+++|++++||.|.+|++.|.....|..|+++|+|+++
T Consensus         8 ~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgepa   60 (60)
T 4gzn_C            8 NFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKPA   60 (60)
T ss_dssp             TTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC--
T ss_pred             CCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCCC
Confidence            57999999999999999999999999999999999999999999999999863

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.9e-15  Score=98.78  Aligned_cols=66  Identities=18%  Similarity=0.374  Sum_probs=59.9

Q ss_pred             hhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCC
Q 037433           23 LDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIA   88 (181)
Q Consensus        23 ~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c   88 (181)
                      ...+.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++|  .++|.|
T Consensus        10 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           10 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            346778999999999999999999999999999999999999999999999999999984  456654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.55  E-value=1.8e-15  Score=92.99  Aligned_cols=56  Identities=16%  Similarity=0.265  Sum_probs=50.6

Q ss_pred             CCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           28 AKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        28 ~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |+++|.|.+|++.|.....|..|+++|++++||.|..|++.|.....|..|+++++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            46899999999999999999999999999999999999999999999999999865

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.5e-15  Score=96.16  Aligned_cols=61  Identities=20%  Similarity=0.325  Sum_probs=56.9

Q ss_pred             hhhcCCCcceeCCcccccCCChHHHHHhHHh-h-cCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           23 LDTSSAKRSYECTFCKRGFTNAQALGGHMNI-H-RKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        23 ~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~-H-~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +++|+++++|.|..|++.|.....|..|+++ | +++++|.|..|++.|.+...|..|+++++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            4689999999999999999999999999998 7 69999999999999999999999999865

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.3e-15  Score=105.80  Aligned_cols=83  Identities=20%  Similarity=0.299  Sum_probs=74.3

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCCCCCCCCCCCch
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPISSDTSRHSPVF  101 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~~~~~~~~~~~~  101 (181)
                      ..|+++++|.| .|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|  .++|.|++|+........+
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            36899999999 99999999999999999999999999999999999999999999984  5679999999887776667


Q ss_pred             hhhccc
Q 037433          102 ESQRNY  107 (181)
Q Consensus       102 ~~~~~~  107 (181)
                      ..|+..
T Consensus        82 ~~H~~~   87 (110)
T 2csh_A           82 HRHVTS   87 (110)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666643

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=2.2e-15  Score=101.42  Aligned_cols=60  Identities=17%  Similarity=0.261  Sum_probs=56.5

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      .+.++...++|.|.+|++.|.....|..|+++|++++||.|..|+++|.+...|.+|++.
T Consensus        19 ~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           19 VLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             CCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcc
Confidence            356788899999999999999999999999999999999999999999999999999865

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=5.7e-15  Score=95.71  Aligned_cols=62  Identities=18%  Similarity=0.386  Sum_probs=56.8

Q ss_pred             hhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           23 LDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        23 ~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      ...++++++|.|..|++.|.....|..|+++|+++++|+|..|++.|.....|..|+++|..
T Consensus         9 ~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   70 (74)
T 2lce_A            9 SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG   70 (74)
T ss_dssp             --CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred             ccccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence            34678899999999999999999999999999999999999999999999999999998643

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.6e-14  Score=94.37  Aligned_cols=69  Identities=28%  Similarity=0.402  Sum_probs=63.7

Q ss_pred             cCCCcceeCCc--ccccCCChHHHHHhHH-hhcCCCCccCCC--CCCCCCCCchhHHHHHh--cCCCCCCCCCCCC
Q 037433           26 SSAKRSYECTF--CKRGFTNAQALGGHMN-IHRKDRAKAKQT--TGPSFITSNPMLTHEDY--MNPRYIAPISSDT   94 (181)
Q Consensus        26 h~~~kp~~C~~--C~k~F~~~~~L~~H~~-~H~gekp~~C~~--C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~   94 (181)
                      .+++++|.|..  |++.|.....|..|++ +|+++++|.|..  |++.|.....|..|+++  ..++|.|++|+..
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~   77 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS   77 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCC
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCC
Confidence            36789999998  9999999999999999 799999999998  99999999999999998  4688999999864

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.2e-14  Score=95.07  Aligned_cols=61  Identities=18%  Similarity=0.278  Sum_probs=56.2

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcC---CCCccCCCCCCCCCCCchhHHHHHhcCCC
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRK---DRAKAKQTTGPSFITSNPMLTHEDYMNPR   85 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~g---ekp~~C~~C~k~F~~~~~L~~H~~~~~~~   85 (181)
                      +|+++++|.|.+|++.|.....|..|+++|++   +++|.|..|++.|.....|..|++.++..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            48899999999999999999999999999996   89999999999999999999999764433

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.50  E-value=8e-15  Score=104.72  Aligned_cols=72  Identities=17%  Similarity=0.259  Sum_probs=63.8

Q ss_pred             CCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCCC
Q 037433           11 DHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPR   85 (181)
Q Consensus        11 ~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~~   85 (181)
                      +.|.....|..|+ .|++++||.|.+|++.|.....|..|+++|  ++||.|..|++.|.+...|..|+++++..
T Consensus        55 ~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           55 QLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             GGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             cccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            4456667777777 688899999999999999999999999999  89999999999999999999999987543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.50  E-value=5.2e-15  Score=98.84  Aligned_cols=80  Identities=20%  Similarity=0.316  Sum_probs=69.5

Q ss_pred             CCcceeCC--cccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCCCCCCCCCCchhh
Q 037433           28 AKRSYECT--FCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPISSDTSRHSPVFES  103 (181)
Q Consensus        28 ~~kp~~C~--~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~~~~~~~~~~  103 (181)
                      ++++|.|.  .|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++  ..++|.|++|+........+..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            46899998  5999999999999999999999999999999999999999999997  5678999999987766656666


Q ss_pred             hccc
Q 037433          104 QRNY  107 (181)
Q Consensus       104 ~~~~  107 (181)
                      |+..
T Consensus        81 H~~~   84 (90)
T 1a1h_A           81 HTKI   84 (90)
T ss_dssp             HHGG
T ss_pred             HHHH
Confidence            6543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=5.1e-15  Score=102.92  Aligned_cols=67  Identities=12%  Similarity=0.199  Sum_probs=60.6

Q ss_pred             cCCCcceeCCcccccCCChHHHHHhHH-hh---cCCCCccCCCCCCCCCCCchhHHH-HHh--cCCCCCCCCCC
Q 037433           26 SSAKRSYECTFCKRGFTNAQALGGHMN-IH---RKDRAKAKQTTGPSFITSNPMLTH-EDY--MNPRYIAPISS   92 (181)
Q Consensus        26 h~~~kp~~C~~C~k~F~~~~~L~~H~~-~H---~gekp~~C~~C~k~F~~~~~L~~H-~~~--~~~~~~c~~~~   92 (181)
                      -+|++||.|..|++.|.....|..|++ +|   ++++||.|..|++.|.....|..| +++  +.++|.|.++.
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            478999999999999999999999998 59   678999999999999999999999 776  57889888754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.47  E-value=6.6e-15  Score=101.94  Aligned_cols=83  Identities=14%  Similarity=0.174  Sum_probs=73.5

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh-cCCCCCCCCCCCCCCCCCc
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY-MNPRYIAPISSDTSRHSPV  100 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-~~~~~~c~~~~~~~~~~~~  100 (181)
                      ++++|+++++|.|.+|++.|.....|..|+++|  +++|.|..|++.|.....|..|++. ..++|.|++|+........
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHHH
Confidence            467899999999999999999999999999999  4799999999999999999999963 4667999999988877767


Q ss_pred             hhhhcc
Q 037433          101 FESQRN  106 (181)
Q Consensus       101 ~~~~~~  106 (181)
                      +..|+.
T Consensus        85 L~~H~~   90 (107)
T 1wjp_A           85 IWRHQV   90 (107)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.46  E-value=1.1e-14  Score=95.50  Aligned_cols=75  Identities=20%  Similarity=0.341  Sum_probs=66.7

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCCCCCCCCCCchhhhc
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPISSDTSRHSPVFESQR  105 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~~~~~~~~~~~~  105 (181)
                      ||.|.+|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++  ..++|.|++|+........+..|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHS   77 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHH
Confidence            689999999999999999999999999999999999999999999999997  567899999997766555555544

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=6e-14  Score=91.52  Aligned_cols=56  Identities=20%  Similarity=0.362  Sum_probs=54.4

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK   62 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C   62 (181)
                      +.|+++|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus        22 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           22 DECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            57999999999999999999999999999999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.46  E-value=8.9e-16  Score=102.86  Aligned_cols=74  Identities=11%  Similarity=0.232  Sum_probs=60.2

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      +.|+++|.....|..|+++|+++++|.|.+|++.|.....|..|+++|.+ ++|.|..|++.|.....|..|++.
T Consensus         7 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            7 RICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            46888888888888888888888888888888888888888888888774 778888888888888888888775

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=3.3e-14  Score=91.63  Aligned_cols=60  Identities=23%  Similarity=0.368  Sum_probs=56.2

Q ss_pred             hhhcCCCcceeCC--cccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc
Q 037433           23 LDTSSAKRSYECT--FCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        23 ~~~h~~~kp~~C~--~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      ..+|+++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            3468899999997  59999999999999999999999999999999999999999999876

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.43  E-value=6.4e-14  Score=85.89  Aligned_cols=54  Identities=20%  Similarity=0.238  Sum_probs=48.5

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      ||.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|++++..
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            688999999999999999999999999999999999999999999999987543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=8.1e-14  Score=86.41  Aligned_cols=54  Identities=20%  Similarity=0.469  Sum_probs=50.2

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHH-hcC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHED-YMN   83 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~-~~~   83 (181)
                      +||.|.+|++.|.....|..|+++|+++++|.|..|++.|.+...|..|++ +|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            589999999999999999999999999999999999999999999999974 454

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1e-13  Score=81.58  Aligned_cols=45  Identities=22%  Similarity=0.490  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.41  E-value=8e-15  Score=98.14  Aligned_cols=67  Identities=19%  Similarity=0.396  Sum_probs=60.3

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC-CCCCCCCCCCCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN-PRYIAPISSDTS   95 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~-~~~~c~~~~~~~   95 (181)
                      ++||.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|+++++ .+|.|+.|+...
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f   68 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELL   68 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHH
Confidence            5799999999999999999999999999999999999999999999999999844 557788776443

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.41  E-value=1.1e-13  Score=81.41  Aligned_cols=45  Identities=18%  Similarity=0.476  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1e-13  Score=81.52  Aligned_cols=45  Identities=22%  Similarity=0.555  Sum_probs=43.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.1e-13  Score=81.31  Aligned_cols=45  Identities=18%  Similarity=0.395  Sum_probs=43.1

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.40  E-value=1.1e-13  Score=81.45  Aligned_cols=45  Identities=18%  Similarity=0.419  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.1e-13  Score=81.29  Aligned_cols=45  Identities=18%  Similarity=0.446  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.1e-13  Score=81.32  Aligned_cols=45  Identities=20%  Similarity=0.448  Sum_probs=43.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.40  E-value=1e-13  Score=81.46  Aligned_cols=45  Identities=16%  Similarity=0.313  Sum_probs=43.1

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=2.6e-13  Score=87.76  Aligned_cols=54  Identities=17%  Similarity=0.337  Sum_probs=52.3

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCc
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAK   60 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~   60 (181)
                      +.|+++|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus        21 ~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           21 DRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             TTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            579999999999999999999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.3e-13  Score=81.05  Aligned_cols=45  Identities=22%  Similarity=0.544  Sum_probs=43.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.5e-13  Score=80.04  Aligned_cols=44  Identities=18%  Similarity=0.451  Sum_probs=42.2

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.1e-13  Score=81.40  Aligned_cols=45  Identities=18%  Similarity=0.403  Sum_probs=43.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.40  E-value=1.2e-13  Score=81.26  Aligned_cols=45  Identities=18%  Similarity=0.472  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1e-13  Score=81.54  Aligned_cols=45  Identities=24%  Similarity=0.516  Sum_probs=43.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.2e-13  Score=81.27  Aligned_cols=45  Identities=18%  Similarity=0.417  Sum_probs=43.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.4e-13  Score=80.92  Aligned_cols=45  Identities=22%  Similarity=0.440  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999886

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.2e-13  Score=81.11  Aligned_cols=45  Identities=18%  Similarity=0.343  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2.2e-15  Score=96.76  Aligned_cols=69  Identities=12%  Similarity=0.084  Sum_probs=62.5

Q ss_pred             chhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCCC
Q 037433           16 DENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPIS   91 (181)
Q Consensus        16 ~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~~   91 (181)
                      ...|..|+++|+++++|.|.+|++.|.....|..       +++|.|..|++.|.....|..|+++|  .++|.|++|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            4578899999999999999999999999888876       89999999999999999999999984  567889887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.6e-13  Score=80.63  Aligned_cols=45  Identities=20%  Similarity=0.414  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.5e-13  Score=80.84  Aligned_cols=45  Identities=22%  Similarity=0.490  Sum_probs=42.8

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.3e-13  Score=81.14  Aligned_cols=45  Identities=22%  Similarity=0.483  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.5e-13  Score=80.76  Aligned_cols=45  Identities=13%  Similarity=0.471  Sum_probs=42.8

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.4e-13  Score=80.89  Aligned_cols=45  Identities=22%  Similarity=0.461  Sum_probs=43.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.39  E-value=1.6e-13  Score=80.80  Aligned_cols=44  Identities=18%  Similarity=0.526  Sum_probs=42.0

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.2e-13  Score=81.21  Aligned_cols=45  Identities=18%  Similarity=0.426  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.7e-13  Score=80.51  Aligned_cols=45  Identities=16%  Similarity=0.474  Sum_probs=42.6

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2e-13  Score=80.35  Aligned_cols=44  Identities=18%  Similarity=0.475  Sum_probs=42.3

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.6e-13  Score=80.62  Aligned_cols=45  Identities=18%  Similarity=0.452  Sum_probs=43.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.9e-13  Score=80.32  Aligned_cols=44  Identities=18%  Similarity=0.466  Sum_probs=42.4

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.1e-13  Score=80.24  Aligned_cols=45  Identities=18%  Similarity=0.423  Sum_probs=42.6

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367899999999999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.3e-13  Score=81.17  Aligned_cols=45  Identities=20%  Similarity=0.440  Sum_probs=43.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.8e-13  Score=80.36  Aligned_cols=45  Identities=20%  Similarity=0.484  Sum_probs=43.1

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.5e-13  Score=80.74  Aligned_cols=45  Identities=18%  Similarity=0.510  Sum_probs=42.8

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.5e-13  Score=80.75  Aligned_cols=45  Identities=20%  Similarity=0.367  Sum_probs=43.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.5e-13  Score=80.85  Aligned_cols=45  Identities=27%  Similarity=0.477  Sum_probs=43.1

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.38  E-value=2.1e-13  Score=80.04  Aligned_cols=45  Identities=18%  Similarity=0.436  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.38  E-value=4e-13  Score=81.98  Aligned_cols=49  Identities=24%  Similarity=0.523  Sum_probs=45.5

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHH-hhcCCCCccCCCCCCCCCCC
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMN-IHRKDRAKAKQTTGPSFITS   72 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~-~H~gekp~~C~~C~k~F~~~   72 (181)
                      ..|+++++|.|.+|++.|.....|..|++ +|++++||.|.+|++.|.+.
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            35788999999999999999999999997 99999999999999999863

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.2e-13  Score=81.27  Aligned_cols=45  Identities=18%  Similarity=0.448  Sum_probs=42.8

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.38  E-value=2.1e-13  Score=92.67  Aligned_cols=80  Identities=14%  Similarity=0.247  Sum_probs=69.7

Q ss_pred             CCCcceeCCc--ccccCCChHHHHHhHHhhcCCCCccCC--CCCCCCCCCchhHHHHHh--cCCCCCCCCCCCCCCCCCc
Q 037433           27 SAKRSYECTF--CKRGFTNAQALGGHMNIHRKDRAKAKQ--TTGPSFITSNPMLTHEDY--MNPRYIAPISSDTSRHSPV  100 (181)
Q Consensus        27 ~~~kp~~C~~--C~k~F~~~~~L~~H~~~H~gekp~~C~--~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~~~~~~~  100 (181)
                      ...++|.|.+  |++.|.....|..|+++|.++++|.|.  .|++.|.....|..|+++  ..++|.|++|+........
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            4567899997  999999999999999999999999996  699999999999999998  4678999999987766555


Q ss_pred             hhhhcc
Q 037433          101 FESQRN  106 (181)
Q Consensus       101 ~~~~~~  106 (181)
                      +..|+.
T Consensus        91 l~~H~~   96 (100)
T 2ebt_A           91 LALHMK   96 (100)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            655543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.38  E-value=1.2e-13  Score=91.90  Aligned_cols=78  Identities=14%  Similarity=0.264  Sum_probs=68.9

Q ss_pred             CcceeCCc--ccccCCChHHHHHhHHhhcCCCCccCC--CCCCCCCCCchhHHHHHh--cCCCCCCCCCCCCCCCCCchh
Q 037433           29 KRSYECTF--CKRGFTNAQALGGHMNIHRKDRAKAKQ--TTGPSFITSNPMLTHEDY--MNPRYIAPISSDTSRHSPVFE  102 (181)
Q Consensus        29 ~kp~~C~~--C~k~F~~~~~L~~H~~~H~gekp~~C~--~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~~~~~~~~~  102 (181)
                      .++|.|.+  |++.|.....|..|+++|.++++|.|.  .|++.|.....|..|+++  +.++|.|++|+........+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46899999  999999999999999999999999997  699999999999999987  567899999998776655566


Q ss_pred             hhcc
Q 037433          103 SQRN  106 (181)
Q Consensus       103 ~~~~  106 (181)
                      .|+.
T Consensus        83 ~H~~   86 (89)
T 2wbs_A           83 LHMK   86 (89)
T ss_dssp             HHGG
T ss_pred             HHHH
Confidence            6554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.3e-13  Score=81.10  Aligned_cols=45  Identities=11%  Similarity=0.413  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.38  E-value=5.3e-14  Score=92.65  Aligned_cols=74  Identities=16%  Similarity=0.217  Sum_probs=64.9

Q ss_pred             ceeC--CcccccCCChHHHHHhHHhhcCCCCccCCC--CCCCCCCCchhHHHHHhcCCCCCCCC---CCCCCCCCCchhh
Q 037433           31 SYEC--TFCKRGFTNAQALGGHMNIHRKDRAKAKQT--TGPSFITSNPMLTHEDYMNPRYIAPI---SSDTSRHSPVFES  103 (181)
Q Consensus        31 p~~C--~~C~k~F~~~~~L~~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~~~~~~~c~~---~~~~~~~~~~~~~  103 (181)
                      ||.|  ..|++.|.....|..|+++|+++++|.|..  |++.|.....|..|++++.. |.|+.   |+........+..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~C~~~~~C~~~f~~~~~l~~   79 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWTLYLK   79 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-EECCSCSSCCCEESSHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCCCCCCCCCCccCCHHHHHH
Confidence            6899  889999999999999999999999999988  99999999999999999776 99999   8876655444444


Q ss_pred             hc
Q 037433          104 QR  105 (181)
Q Consensus       104 ~~  105 (181)
                      |+
T Consensus        80 H~   81 (85)
T 2j7j_A           80 HV   81 (85)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.8e-13  Score=80.42  Aligned_cols=45  Identities=18%  Similarity=0.327  Sum_probs=42.8

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.38  E-value=2.2e-13  Score=80.16  Aligned_cols=45  Identities=16%  Similarity=0.440  Sum_probs=42.7

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367899999999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.9e-13  Score=80.37  Aligned_cols=45  Identities=20%  Similarity=0.476  Sum_probs=42.6

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999875

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2.7e-13  Score=79.68  Aligned_cols=44  Identities=16%  Similarity=0.406  Sum_probs=42.4

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.1e-13  Score=80.19  Aligned_cols=45  Identities=18%  Similarity=0.471  Sum_probs=43.1

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2.7e-13  Score=79.66  Aligned_cols=45  Identities=18%  Similarity=0.250  Sum_probs=42.8

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.8e-13  Score=80.44  Aligned_cols=45  Identities=18%  Similarity=0.454  Sum_probs=42.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.3e-13  Score=80.12  Aligned_cols=44  Identities=16%  Similarity=0.447  Sum_probs=42.1

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=1.8e-13  Score=95.00  Aligned_cols=60  Identities=15%  Similarity=0.130  Sum_probs=55.6

Q ss_pred             CCCCCCCCCchhHHHHhh-hc---CCCcceeCCcccccCCChHHHHHh-HHhhcCCCCccCCCCC
Q 037433            7 QVGSDHSSSDENEVKELD-TS---SAKRSYECTFCKRGFTNAQALGGH-MNIHRKDRAKAKQTTG   66 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~-~h---~~~kp~~C~~C~k~F~~~~~L~~H-~~~H~gekp~~C~~C~   66 (181)
                      +.|+++|...+.|..|++ +|   ++++||.|.+|++.|.....|..| +++|+++|||.|.++.
T Consensus        22 ~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           22 KYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             SSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            479999999999999997 59   678999999999999999999999 8999999999998754

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.3e-13  Score=80.03  Aligned_cols=45  Identities=18%  Similarity=0.498  Sum_probs=42.8

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.3e-13  Score=79.37  Aligned_cols=44  Identities=18%  Similarity=0.465  Sum_probs=42.2

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=3.8e-13  Score=85.29  Aligned_cols=56  Identities=21%  Similarity=0.304  Sum_probs=52.7

Q ss_pred             cCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC-CCCCCCCCCchhHHHHHhcC
Q 037433           26 SSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ-TTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        26 h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~-~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ..+++||.|.+|++.|. ...|..|+++ ++++||.|. .|++.|.....|..|+++|.
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            46789999999999999 9999999999 999999999 99999999999999999864

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5e-13  Score=78.59  Aligned_cols=45  Identities=18%  Similarity=0.493  Sum_probs=42.3

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.7e-13  Score=78.82  Aligned_cols=45  Identities=20%  Similarity=0.450  Sum_probs=42.7

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHH-hhcCCCCccCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMN-IHRKDRAKAKQTT   65 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~-~H~gekp~~C~~C   65 (181)
                      .|+++|+++++|.|.+|++.|.....|..|++ +|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            47889999999999999999999999999999 9999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=1e-12  Score=88.52  Aligned_cols=60  Identities=18%  Similarity=0.212  Sum_probs=47.3

Q ss_pred             cceeCCcccccCCChHHHHHhHHh-hcCCCC--------ccCCCCCCCCCCCchhHHHHHh--cCCCCCCC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNI-HRKDRA--------KAKQTTGPSFITSNPMLTHEDY--MNPRYIAP   89 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~-H~gekp--------~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~   89 (181)
                      ..|.|..|++.|.....|..|+++ |+++++        |.|..|++.|.....|..|+++  +.++|.|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            346788888888888888888887 888777        7888888888888888888887  45677664

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.8e-12  Score=85.57  Aligned_cols=63  Identities=13%  Similarity=0.212  Sum_probs=58.7

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCC----cceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAK----RSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSF   69 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~----kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F   69 (181)
                      +.|+++|.....|..|+++|...    ++|.|.+|++.|.....|..|+++|++++++.|..|+.+|
T Consensus        19 ~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           19 SHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             SSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             CCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            47999999999999999877665    7999999999999999999999999999999999999876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.32  E-value=6.6e-13  Score=85.29  Aligned_cols=59  Identities=20%  Similarity=0.287  Sum_probs=54.2

Q ss_pred             hhcCCCcceeCCc--ccccCCChHHHHHhHHhhcCCCCccCCC--CCCCCCCCchhHHHHHhc
Q 037433           24 DTSSAKRSYECTF--CKRGFTNAQALGGHMNIHRKDRAKAKQT--TGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        24 ~~h~~~kp~~C~~--C~k~F~~~~~L~~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~~   82 (181)
                      ..+...++|.|.+  |++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4567789999998  9999999999999999999999999965  999999999999998764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=9.4e-13  Score=77.37  Aligned_cols=44  Identities=20%  Similarity=0.454  Sum_probs=41.4

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.31  E-value=8.5e-13  Score=77.57  Aligned_cols=44  Identities=18%  Similarity=0.505  Sum_probs=41.5

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.31  E-value=1.1e-12  Score=75.45  Aligned_cols=42  Identities=24%  Similarity=0.453  Sum_probs=39.8

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            578899999999999999999999999999999999999984

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.31  E-value=1.5e-13  Score=86.46  Aligned_cols=55  Identities=13%  Similarity=0.172  Sum_probs=49.9

Q ss_pred             HHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhH
Q 037433           19 EVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPML   76 (181)
Q Consensus        19 L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~   76 (181)
                      |..|+++|++++||.|..|++.|.....|.   ++|++++||.|..|++.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            567899999999999999999999998886   7899999999999999999877654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=8.5e-13  Score=77.49  Aligned_cols=44  Identities=20%  Similarity=0.465  Sum_probs=41.3

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=8.6e-13  Score=77.55  Aligned_cols=44  Identities=23%  Similarity=0.499  Sum_probs=41.5

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=9.3e-13  Score=77.25  Aligned_cols=44  Identities=16%  Similarity=0.446  Sum_probs=41.5

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=9.4e-13  Score=77.30  Aligned_cols=44  Identities=16%  Similarity=0.509  Sum_probs=41.2

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.1e-12  Score=76.93  Aligned_cols=44  Identities=20%  Similarity=0.479  Sum_probs=41.3

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.1e-12  Score=77.00  Aligned_cols=44  Identities=20%  Similarity=0.547  Sum_probs=41.6

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.1e-12  Score=77.05  Aligned_cols=44  Identities=18%  Similarity=0.490  Sum_probs=41.4

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.1e-12  Score=77.00  Aligned_cols=44  Identities=18%  Similarity=0.467  Sum_probs=41.5

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            47889999999999999999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.30  E-value=9.8e-13  Score=80.16  Aligned_cols=52  Identities=12%  Similarity=0.268  Sum_probs=48.7

Q ss_pred             CCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCcc
Q 037433           10 SDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKA   61 (181)
Q Consensus        10 ~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~   61 (181)
                      .++|.+...|..|+++|+++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4778888999999999999999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=9.9e-13  Score=77.21  Aligned_cols=44  Identities=20%  Similarity=0.494  Sum_probs=41.2

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.1e-12  Score=76.99  Aligned_cols=44  Identities=16%  Similarity=0.449  Sum_probs=41.4

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.6e-12  Score=74.67  Aligned_cols=42  Identities=24%  Similarity=0.468  Sum_probs=39.6

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            578899999999999999999999999999999999999984

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.4e-12  Score=76.48  Aligned_cols=44  Identities=20%  Similarity=0.398  Sum_probs=41.2

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.6e-12  Score=76.33  Aligned_cols=44  Identities=25%  Similarity=0.567  Sum_probs=41.4

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.6e-12  Score=76.34  Aligned_cols=43  Identities=26%  Similarity=0.566  Sum_probs=40.6

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6789999999999999999999999999999999999999963

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.3e-12  Score=76.61  Aligned_cols=44  Identities=18%  Similarity=0.496  Sum_probs=41.4

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.4e-12  Score=76.51  Aligned_cols=43  Identities=19%  Similarity=0.522  Sum_probs=41.1

Q ss_pred             hhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           23 LDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        23 ~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +++|+++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5689999999999999999999999999999999999999987

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.3e-12  Score=76.69  Aligned_cols=44  Identities=23%  Similarity=0.516  Sum_probs=41.2

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=77.20  Aligned_cols=44  Identities=16%  Similarity=0.518  Sum_probs=41.5

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.29  E-value=2.2e-12  Score=75.43  Aligned_cols=43  Identities=23%  Similarity=0.499  Sum_probs=41.1

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCC
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTG   66 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~   66 (181)
                      .+|+++++|.|..|++.|.....|..|+++|+++++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4789999999999999999999999999999999999999996

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.3e-12  Score=76.72  Aligned_cols=44  Identities=16%  Similarity=0.504  Sum_probs=41.3

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=76.68  Aligned_cols=44  Identities=18%  Similarity=0.468  Sum_probs=41.2

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.6e-12  Score=76.48  Aligned_cols=43  Identities=19%  Similarity=0.515  Sum_probs=40.6

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            6789999999999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.4e-12  Score=76.49  Aligned_cols=44  Identities=18%  Similarity=0.483  Sum_probs=41.4

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.2e-12  Score=75.88  Aligned_cols=43  Identities=16%  Similarity=0.329  Sum_probs=40.5

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4788999999999999999999999999999999999999984

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.5e-12  Score=75.50  Aligned_cols=43  Identities=19%  Similarity=0.443  Sum_probs=40.7

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999999999984

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.4e-12  Score=76.68  Aligned_cols=43  Identities=16%  Similarity=0.475  Sum_probs=40.8

Q ss_pred             hhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           23 LDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        23 ~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +++|+++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5789999999999999999999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-12  Score=75.27  Aligned_cols=42  Identities=19%  Similarity=0.464  Sum_probs=39.8

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK   62 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C   62 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            378899999999999999999999999999999999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=2.5e-12  Score=76.30  Aligned_cols=43  Identities=14%  Similarity=0.362  Sum_probs=41.0

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCC
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGP   67 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k   67 (181)
                      .|+++++|.|.+|++.|.....|..|+++|++++||.|.+|+|
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            5788999999999999999999999999999999999999986

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.5e-12  Score=76.47  Aligned_cols=43  Identities=21%  Similarity=0.461  Sum_probs=41.0

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4788999999999999999999999999999999999999996

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.6e-12  Score=75.62  Aligned_cols=43  Identities=19%  Similarity=0.398  Sum_probs=40.5

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4788999999999999999999999999999999999999984

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.7e-12  Score=75.34  Aligned_cols=43  Identities=19%  Similarity=0.400  Sum_probs=40.5

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3788999999999999999999999999999999999999984

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.26  E-value=2.6e-12  Score=73.77  Aligned_cols=41  Identities=20%  Similarity=0.366  Sum_probs=39.3

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK   62 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C   62 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            67899999999999999999999999999999999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.26  E-value=5.7e-12  Score=76.98  Aligned_cols=52  Identities=21%  Similarity=0.381  Sum_probs=50.0

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      +.|+++|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+++|
T Consensus         5 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            5 EECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             TTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            5799999999999999999999999999999999999999999999999876

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2.3e-12  Score=74.87  Aligned_cols=43  Identities=19%  Similarity=0.389  Sum_probs=40.7

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4788999999999999999999999999999999999999984

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.6e-12  Score=75.44  Aligned_cols=43  Identities=19%  Similarity=0.598  Sum_probs=40.1

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5778999999999999999999999999999999999999963

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.8e-12  Score=74.49  Aligned_cols=41  Identities=22%  Similarity=0.469  Sum_probs=39.3

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK   62 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C   62 (181)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67899999999999999999999999999999999999987

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.25  E-value=3.5e-12  Score=85.66  Aligned_cols=52  Identities=19%  Similarity=0.422  Sum_probs=48.9

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhH-HhhcCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHM-NIHRKDR   58 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~-~~H~gek   58 (181)
                      ++|+++|.+...|.+|+++|++++||.|.+|++.|.....|..|+ ++|++|.
T Consensus        32 ~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           32 PVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            589999999999999999999999999999999999999999997 5798874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=4.2e-12  Score=81.08  Aligned_cols=55  Identities=18%  Similarity=0.255  Sum_probs=52.2

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCcc
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKA   61 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~   61 (181)
                      +.|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++|..
T Consensus        13 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A           13 SECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            4799999999999999999999999999999999999999999999999998753

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.4e-12  Score=74.08  Aligned_cols=41  Identities=24%  Similarity=0.546  Sum_probs=39.2

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK   62 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C   62 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67899999999999999999999999999999999999987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.9e-12  Score=76.07  Aligned_cols=44  Identities=23%  Similarity=0.653  Sum_probs=40.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999963

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.3e-12  Score=75.52  Aligned_cols=44  Identities=20%  Similarity=0.504  Sum_probs=41.3

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999963

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.24  E-value=1.1e-11  Score=83.39  Aligned_cols=57  Identities=14%  Similarity=0.199  Sum_probs=54.4

Q ss_pred             CCCCCCCCCchhHHHHhhh-cCCCcc--------eeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433            7 QVGSDHSSSDENEVKELDT-SSAKRS--------YECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~-h~~~kp--------~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      +.|+++|.....|..|+++ |+++++        |.|.+|++.|.....|..|+++|++++||.|.
T Consensus        29 ~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           29 KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4799999999999999998 999888        99999999999999999999999999999996

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.1e-12  Score=75.12  Aligned_cols=44  Identities=16%  Similarity=0.429  Sum_probs=40.7

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcC-CCCccCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRK-DRAKAKQT   64 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~g-ekp~~C~~   64 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++ ++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999 99999963

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2e-12  Score=75.16  Aligned_cols=43  Identities=23%  Similarity=0.475  Sum_probs=40.6

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999999999984

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=4.7e-12  Score=73.58  Aligned_cols=42  Identities=21%  Similarity=0.361  Sum_probs=39.7

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||+|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            678899999999999999999999999999999999999984

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.7e-12  Score=76.12  Aligned_cols=43  Identities=14%  Similarity=0.367  Sum_probs=40.5

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999999999985

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.9e-12  Score=73.24  Aligned_cols=43  Identities=21%  Similarity=0.319  Sum_probs=40.3

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            4788999999999999999999999999999999999999873

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.7e-12  Score=74.05  Aligned_cols=44  Identities=16%  Similarity=0.370  Sum_probs=41.4

Q ss_pred             HhhhcCCCcceeCC--cccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433           22 ELDTSSAKRSYECT--FCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus        22 h~~~h~~~kp~~C~--~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      |.++|+++++|.|.  .|++.|.....|..|+++|++++||+|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            46789999999998  899999999999999999999999999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.9e-12  Score=73.87  Aligned_cols=43  Identities=21%  Similarity=0.499  Sum_probs=39.9

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +.++|+++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3568999999999999999999999999999999999999964

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1e-11  Score=84.81  Aligned_cols=58  Identities=10%  Similarity=0.247  Sum_probs=54.1

Q ss_pred             CCCCCCCC-CchhHHHHhhhcCC-CcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433            7 QVGSDHSS-SDENEVKELDTSSA-KRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus         7 ~~c~~sf~-~~s~L~~h~~~h~~-~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +.|++.|. ....|..|+++|++ +++|.|.+|++.|.....|..|+++|++++|+....
T Consensus        28 ~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~~   87 (98)
T 2gqj_A           28 PTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEA   87 (98)
T ss_dssp             TTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCCC
T ss_pred             CCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            57999999 99999999999999 999999999999999999999999999999976543

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=8.4e-12  Score=73.26  Aligned_cols=42  Identities=19%  Similarity=0.359  Sum_probs=39.5

Q ss_pred             hhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           23 LDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        23 ~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      +++|+++++|.|.+|++.|.....|..|+++|++++||+|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            578999999999999999999999999999999999999964

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=2e-11  Score=83.50  Aligned_cols=54  Identities=13%  Similarity=0.248  Sum_probs=49.5

Q ss_pred             CCCCCCC-CCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHh-HHhhcCCCCcc
Q 037433            7 QVGSDHS-SSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGH-MNIHRKDRAKA   61 (181)
Q Consensus         7 ~~c~~sf-~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H-~~~H~gekp~~   61 (181)
                      ++|+++| ....+|..|+++| ++++|.|.+|++.|.....|..| +++|+++..|.
T Consensus        38 ~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           38 PTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             TTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             CCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCC
Confidence            5799999 9999999999999 99999999999999999999999 99998754443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.19  E-value=1.5e-11  Score=71.21  Aligned_cols=41  Identities=20%  Similarity=0.353  Sum_probs=38.6

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      ++|+++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            57899999999999999999999999999999999999964

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.6e-11  Score=70.12  Aligned_cols=39  Identities=31%  Similarity=0.519  Sum_probs=37.4

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccC
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK   62 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C   62 (181)
                      ++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            578999999999999999999999999999999999987

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=2.2e-11  Score=78.14  Aligned_cols=53  Identities=19%  Similarity=0.331  Sum_probs=50.1

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRA   59 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp   59 (181)
                      +.|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+++.+
T Consensus        18 ~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           18 VECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             SSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            57999999999999999999999999999999999999999999999998753

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.15  E-value=2.7e-11  Score=73.89  Aligned_cols=50  Identities=22%  Similarity=0.371  Sum_probs=47.2

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRK   56 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~g   56 (181)
                      +.|+++|.....|..|+++|+++++|.|.+|++.|.....|..|+++|.+
T Consensus         8 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            8 SYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             TTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            57999999999999999999999999999999999999999999998863

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.13  E-value=9.6e-13  Score=93.76  Aligned_cols=79  Identities=9%  Similarity=0.014  Sum_probs=65.2

Q ss_pred             CCCcceeCCcccccCC------ChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCCCCCCCCCCCCCCCCCc
Q 037433           27 SAKRSYECTFCKRGFT------NAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTSRHSPV  100 (181)
Q Consensus        27 ~~~kp~~C~~C~k~F~------~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~~~~c~~~~~~~~~~~~  100 (181)
                      ...+.+.|.+|.+.|.      ....|..|+ .|++++||.|..|++.|.....|..|+++|.++|.|++|+........
T Consensus        37 ~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           37 PEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHH
T ss_pred             hhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHH
Confidence            3456788888776554      677777777 699999999999999999999999999999999999999988776666


Q ss_pred             hhhhcc
Q 037433          101 FESQRN  106 (181)
Q Consensus       101 ~~~~~~  106 (181)
                      +..|+.
T Consensus       116 l~~H~~  121 (129)
T 2wbt_A          116 ALDHVC  121 (129)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            665554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=5.9e-11  Score=73.18  Aligned_cols=52  Identities=23%  Similarity=0.461  Sum_probs=48.5

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhH-HhhcCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHM-NIHRKDR   58 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~-~~H~gek   58 (181)
                      +.|+++|.....|..|+++|+++++|.|.+|++.|.....|..|+ ++|+++.
T Consensus         6 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            6 EVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             TTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            579999999999999999999999999999999999999999997 6888753

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=7.7e-12  Score=84.40  Aligned_cols=66  Identities=17%  Similarity=0.379  Sum_probs=53.9

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCCCCCCCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAPI   90 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~~~~c~~   90 (181)
                      .+.++|+++++|.|.+|++.|.....|..|+++|++++||+|..|.    ....|..|.+++...+..-.
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~~~~~~   80 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGAFADFK   80 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCSSSCCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccccccccc
Confidence            3456799999999999999999999999999999999999997764    45556667777766663333

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.7e-11  Score=80.20  Aligned_cols=65  Identities=15%  Similarity=0.187  Sum_probs=58.7

Q ss_pred             hhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           17 ENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        17 s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      ..|..|+++|.+++++.|.+|++.|. ...|..|+ +|.+++|+.|..|++.|.. ..|..|++++..
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~   67 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGR   67 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTT
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccC
Confidence            56888999999999999999999995 89999999 9999999999999999874 889999988544

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.07  E-value=6.8e-11  Score=69.20  Aligned_cols=43  Identities=7%  Similarity=-0.012  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478999999999999999999999999999998  4678999887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.06  E-value=4.3e-11  Score=70.07  Aligned_cols=43  Identities=7%  Similarity=0.070  Sum_probs=39.6

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|++++||.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  5678999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.6e-11  Score=69.89  Aligned_cols=43  Identities=7%  Similarity=-0.001  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            588899999999999999999999999999998  5678999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.8e-11  Score=69.73  Aligned_cols=43  Identities=14%  Similarity=0.067  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|++++||.|..|++.|.+...|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.05  E-value=4.3e-11  Score=69.99  Aligned_cols=43  Identities=5%  Similarity=-0.043  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|++++||.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            588999999999999999999999999999998  4678999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.1e-11  Score=69.59  Aligned_cols=43  Identities=9%  Similarity=0.088  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.5e-11  Score=69.47  Aligned_cols=43  Identities=9%  Similarity=0.019  Sum_probs=39.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|++++||.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4578999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.8e-11  Score=69.37  Aligned_cols=43  Identities=7%  Similarity=0.038  Sum_probs=39.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678989887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.4e-11  Score=69.24  Aligned_cols=43  Identities=9%  Similarity=-0.011  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588899999999999999999999999999998  4678999887

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.04  E-value=1.6e-10  Score=65.18  Aligned_cols=38  Identities=61%  Similarity=1.118  Sum_probs=35.0

Q ss_pred             cCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           26 SSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        26 h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      |+++++|.|.+|++.|.....|..|+++|++++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            67899999999999999999999999999999999764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=7.9e-11  Score=75.47  Aligned_cols=48  Identities=17%  Similarity=0.486  Sum_probs=46.4

Q ss_pred             CCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhc
Q 037433            8 VGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus         8 ~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      .|+++|.....|..|+++|+++++|.|.+|++.|.....|..|+++|+
T Consensus        26 ~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           26 SCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             TBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            699999999999999999999999999999999999999999999885

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.1e-11  Score=70.10  Aligned_cols=43  Identities=9%  Similarity=0.079  Sum_probs=39.7

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  5788999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.6e-11  Score=68.91  Aligned_cols=43  Identities=7%  Similarity=-0.062  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.....|+.|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            488999999999999999999999999999998  5678999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.8e-11  Score=69.79  Aligned_cols=43  Identities=7%  Similarity=0.071  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678989876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.2e-11  Score=68.85  Aligned_cols=43  Identities=5%  Similarity=-0.055  Sum_probs=39.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.+...|..|+++  ..++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999998  4688999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.6e-11  Score=68.62  Aligned_cols=43  Identities=7%  Similarity=-0.019  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.+...|+.|+++  ..++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999998  5788999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.1e-11  Score=70.11  Aligned_cols=43  Identities=7%  Similarity=-0.019  Sum_probs=39.7

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            588999999999999999999999999999998  5688999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.9e-11  Score=69.76  Aligned_cols=43  Identities=7%  Similarity=0.006  Sum_probs=39.7

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            488899999999999999999999999999997  5788999887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.02  E-value=4.1e-11  Score=70.10  Aligned_cols=43  Identities=7%  Similarity=0.013  Sum_probs=39.6

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  5678999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.8e-11  Score=69.71  Aligned_cols=43  Identities=7%  Similarity=0.004  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.9e-11  Score=69.82  Aligned_cols=43  Identities=7%  Similarity=-0.004  Sum_probs=39.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            488999999999999999999999999999998  4578999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.4e-11  Score=69.16  Aligned_cols=43  Identities=7%  Similarity=0.042  Sum_probs=39.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588899999999999999999999999999998  4678999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.1e-11  Score=69.69  Aligned_cols=43  Identities=9%  Similarity=-0.026  Sum_probs=39.8

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            488999999999999999999999999999998  5788999887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.6e-11  Score=69.90  Aligned_cols=43  Identities=7%  Similarity=0.023  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678999887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5e-11  Score=69.64  Aligned_cols=43  Identities=16%  Similarity=0.152  Sum_probs=39.6

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999998  5678999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.5e-11  Score=69.94  Aligned_cols=43  Identities=7%  Similarity=0.034  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|++++||.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  5678999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.9e-11  Score=68.49  Aligned_cols=43  Identities=7%  Similarity=0.010  Sum_probs=39.2

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999998  4678999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.01  E-value=4.8e-11  Score=69.73  Aligned_cols=43  Identities=5%  Similarity=-0.064  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999998  5678999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.1e-11  Score=69.76  Aligned_cols=43  Identities=9%  Similarity=0.033  Sum_probs=39.7

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.+.+.|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            588999999999999999999999999999997  5788999887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.1e-11  Score=69.70  Aligned_cols=43  Identities=7%  Similarity=-0.018  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999999999999999998  4678999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.7e-11  Score=69.78  Aligned_cols=43  Identities=9%  Similarity=0.019  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=6.9e-11  Score=68.46  Aligned_cols=42  Identities=7%  Similarity=-0.001  Sum_probs=38.5

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      |+++|++++||.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67899999999999999999999999999998  5678999876

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.6e-10  Score=74.00  Aligned_cols=58  Identities=10%  Similarity=0.239  Sum_probs=52.2

Q ss_pred             CCCCCCCCCchhHHHHhhhcCC---CcceeCCcccccCCChHHHHHhH-HhhcCCCCccCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSA---KRSYECTFCKRGFTNAQALGGHM-NIHRKDRAKAKQT   64 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~---~kp~~C~~C~k~F~~~~~L~~H~-~~H~gekp~~C~~   64 (181)
                      +.|++.|.....|..|+++|++   +++|.|.+|++.|.....|..|+ ..|.++++.....
T Consensus        11 ~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~   72 (78)
T 2d9h_A           11 EICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQES   72 (78)
T ss_dssp             SSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSSS
T ss_pred             CCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcccc
Confidence            5799999999999999999996   89999999999999999999999 5688888876543

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=4e-11  Score=70.20  Aligned_cols=43  Identities=7%  Similarity=0.023  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.3e-11  Score=69.29  Aligned_cols=43  Identities=7%  Similarity=-0.034  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.+...|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  5678999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7.5e-11  Score=68.96  Aligned_cols=43  Identities=7%  Similarity=-0.016  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            488999999999999999999999999999998  4678999887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7.2e-11  Score=69.02  Aligned_cols=43  Identities=9%  Similarity=0.050  Sum_probs=39.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678999886

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=6.2e-11  Score=69.30  Aligned_cols=43  Identities=7%  Similarity=-0.041  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=8.7e-11  Score=68.67  Aligned_cols=43  Identities=12%  Similarity=0.059  Sum_probs=39.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999998  4678999887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=6.6e-11  Score=69.20  Aligned_cols=43  Identities=9%  Similarity=0.075  Sum_probs=39.0

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678988875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.2e-10  Score=68.16  Aligned_cols=43  Identities=12%  Similarity=0.099  Sum_probs=39.2

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHH-h--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHED-Y--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~-~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.....|..|++ +  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            47899999999999999999999999999999 6  5678999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.98  E-value=9.4e-11  Score=68.44  Aligned_cols=43  Identities=12%  Similarity=0.039  Sum_probs=39.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.+...|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            488999999999999999999999999999998  4678999887

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.98  E-value=3.8e-10  Score=70.81  Aligned_cols=50  Identities=26%  Similarity=0.419  Sum_probs=46.8

Q ss_pred             CCCCCCCCCchhHHHHhhh-c-CCCcceeCCcccccCCChHHHHHhHHhhcC
Q 037433            7 QVGSDHSSSDENEVKELDT-S-SAKRSYECTFCKRGFTNAQALGGHMNIHRK   56 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~-h-~~~kp~~C~~C~k~F~~~~~L~~H~~~H~g   56 (181)
                      +.|+++|.....|..|+++ | +++++|.|.+|++.|.....|..|+++|.+
T Consensus        14 ~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           14 KVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            5799999999999999998 7 689999999999999999999999998875

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=7.1e-11  Score=68.97  Aligned_cols=43  Identities=7%  Similarity=0.021  Sum_probs=39.2

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|++++||.|..|++.|.....|+.|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678989876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.2e-10  Score=67.99  Aligned_cols=43  Identities=7%  Similarity=0.084  Sum_probs=39.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999998  5678999887

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.7e-10  Score=63.21  Aligned_cols=36  Identities=22%  Similarity=0.650  Sum_probs=33.4

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCC
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRA   59 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp   59 (181)
                      ++|+++++|.|.+|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999875

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=8.8e-11  Score=68.64  Aligned_cols=43  Identities=7%  Similarity=0.039  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4678989887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.3e-10  Score=67.90  Aligned_cols=43  Identities=9%  Similarity=0.042  Sum_probs=39.2

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|++++||.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999998  4678999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.96  E-value=1.2e-10  Score=68.19  Aligned_cols=43  Identities=9%  Similarity=-0.068  Sum_probs=39.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++|  .++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788999999999999999999999999999984  678999887

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=4.7e-10  Score=72.09  Aligned_cols=40  Identities=30%  Similarity=0.438  Sum_probs=36.2

Q ss_pred             hcCCCcceeCCc--ccccCCChHHHHHhH-HhhcCCCCccCCC
Q 037433           25 TSSAKRSYECTF--CKRGFTNAQALGGHM-NIHRKDRAKAKQT   64 (181)
Q Consensus        25 ~h~~~kp~~C~~--C~k~F~~~~~L~~H~-~~H~gekp~~C~~   64 (181)
                      ..+++|||.|.+  |+++|.+...|..|+ ++|+++|||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            568999999976  999999999999997 6899999999854

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=8.4e-11  Score=68.73  Aligned_cols=43  Identities=7%  Similarity=0.012  Sum_probs=39.6

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999998  4688999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=9.2e-11  Score=68.57  Aligned_cols=43  Identities=5%  Similarity=-0.037  Sum_probs=39.2

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++  ..++|.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            478899999999999999999999999999998  4578999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.6e-10  Score=67.57  Aligned_cols=43  Identities=5%  Similarity=-0.097  Sum_probs=39.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            478899999999999999999999999999998  5688999887

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.6e-10  Score=67.53  Aligned_cols=43  Identities=7%  Similarity=-0.028  Sum_probs=38.9

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999998  4678888875

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.4e-10  Score=66.71  Aligned_cols=42  Identities=7%  Similarity=0.031  Sum_probs=37.8

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~   90 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++|  .++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5888999999999999999999999999999984  57788765

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.4e-10  Score=66.61  Aligned_cols=42  Identities=12%  Similarity=0.077  Sum_probs=38.0

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            588999999999999999999999999999998  457788875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3e-10  Score=71.67  Aligned_cols=51  Identities=12%  Similarity=0.133  Sum_probs=47.7

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCC-cccccCCChHHHHHhHHhhcCCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECT-FCKRGFTNAQALGGHMNIHRKDRA   59 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~-~C~k~F~~~~~L~~H~~~H~gekp   59 (181)
                      +.|+++|. .+.|..|+++ ++++||.|. .|++.|.....|..|+++|...++
T Consensus        14 ~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           14 TYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             SSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            57999999 9999999999 999999999 999999999999999999987765

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.7e-10  Score=66.49  Aligned_cols=42  Identities=7%  Similarity=0.037  Sum_probs=37.7

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            488999999999999999999999999999998  457787765

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.9e-10  Score=66.34  Aligned_cols=42  Identities=7%  Similarity=0.013  Sum_probs=37.7

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            478899999999999999999999999999998  457788765

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.8e-10  Score=67.30  Aligned_cols=42  Identities=10%  Similarity=0.071  Sum_probs=38.0

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|+|..|++.|.+...|..|+++  ..++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            588999999999999999999999999999998  467888875

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=65.94  Aligned_cols=42  Identities=7%  Similarity=-0.040  Sum_probs=38.0

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            478899999999999999999999999999998  467888875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.91  E-value=5.5e-10  Score=71.34  Aligned_cols=48  Identities=17%  Similarity=0.394  Sum_probs=44.9

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCc--ccccCCChHHHHHhHHhh
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTF--CKRGFTNAQALGGHMNIH   54 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~--C~k~F~~~~~L~~H~~~H   54 (181)
                      +.|+++|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|
T Consensus        23 ~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           23 PGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             TTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            349999999999999999999999999976  999999999999999876

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=65.83  Aligned_cols=42  Identities=7%  Similarity=0.006  Sum_probs=37.7

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            488899999999999999999999999999998  457788765

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.5e-10  Score=67.56  Aligned_cols=42  Identities=5%  Similarity=-0.020  Sum_probs=38.1

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            588999999999999999999999999999998  467788875

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.1e-10  Score=65.72  Aligned_cols=42  Identities=10%  Similarity=0.020  Sum_probs=37.8

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            488999999999999999999999999999998  457788865

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.5e-10  Score=66.13  Aligned_cols=42  Identities=12%  Similarity=0.065  Sum_probs=37.6

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|++++||.|..|++.|.+...|..|+++  ..++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            378899999999999999999999999999998  457788875

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=2.6e-10  Score=66.67  Aligned_cols=42  Identities=12%  Similarity=0.044  Sum_probs=38.0

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|++++||.|..|++.|.....|..|+++  +.++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            478899999999999999999999999999998  467888875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.90  E-value=7.3e-10  Score=61.43  Aligned_cols=36  Identities=22%  Similarity=0.425  Sum_probs=28.9

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      |+++|++++||.|..|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            567788888888888888888888888888888764

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.5e-10  Score=66.11  Aligned_cols=42  Identities=12%  Similarity=0.037  Sum_probs=37.8

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            488899999999999999999999999999998  467888875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.90  E-value=1e-09  Score=60.02  Aligned_cols=35  Identities=29%  Similarity=0.594  Sum_probs=32.2

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcCCCC
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRA   59 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp   59 (181)
                      +|+++++|.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47899999999999999999999999999999875

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.4e-10  Score=66.67  Aligned_cols=42  Identities=7%  Similarity=0.018  Sum_probs=37.9

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  +.++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            588899999999999999999999999999998  457788875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.3e-10  Score=66.07  Aligned_cols=42  Identities=10%  Similarity=0.081  Sum_probs=38.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            488999999999999999999999999999998  578898876

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.3e-10  Score=65.68  Aligned_cols=42  Identities=10%  Similarity=-0.021  Sum_probs=38.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++  ..++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            588999999999999999999999999999998  578898875

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.89  E-value=2.8e-10  Score=66.52  Aligned_cols=42  Identities=14%  Similarity=0.056  Sum_probs=37.9

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|++++||.|..|++.|.....|..|+++  +.++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            488999999999999999999999999999998  467788875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.89  E-value=1.1e-09  Score=59.75  Aligned_cols=35  Identities=23%  Similarity=0.453  Sum_probs=32.0

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcCCCC
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRA   59 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp   59 (181)
                      +|+++++|.|..|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47889999999999999999999999999999875

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.89  E-value=2.9e-10  Score=64.97  Aligned_cols=40  Identities=8%  Similarity=0.081  Sum_probs=35.6

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAP   89 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~   89 (181)
                      |+++|+++++|.|..|++.|.+...|..|+++|  .++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            678999999999999999999999999999984  5677764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.3e-10  Score=66.13  Aligned_cols=42  Identities=12%  Similarity=0.090  Sum_probs=37.7

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++|  .++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            4889999999999999999999999999999984  57788865

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.5e-10  Score=65.21  Aligned_cols=42  Identities=7%  Similarity=-0.016  Sum_probs=37.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~   90 (181)
                      .|+++|++++||.|..|++.|.....|..|+++|  .++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4789999999999999999999999999999984  57787763

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4e-10  Score=65.83  Aligned_cols=42  Identities=7%  Similarity=0.031  Sum_probs=37.8

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      +|+++|++++||.|..|++.|.+...|..|+++  +.++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            588999999999999999999999999999998  457788865

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.88  E-value=2e-10  Score=69.66  Aligned_cols=46  Identities=4%  Similarity=-0.021  Sum_probs=42.6

Q ss_pred             cccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           38 KRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        38 ~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ++.|.....|..|+++|+++++|.|..|++.|...+.|..|+++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   48 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhc
Confidence            4678888999999999999999999999999999999999999854

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.5e-10  Score=63.41  Aligned_cols=39  Identities=8%  Similarity=0.086  Sum_probs=34.8

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIA   88 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c   88 (181)
                      |+++|++++||.|..|++.|.+...|..|+++|  .++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            678899999999999999999999999999984  566766

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=4.2e-10  Score=65.73  Aligned_cols=42  Identities=12%  Similarity=0.000  Sum_probs=37.6

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc---CCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM---NPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~---~~~~~c~~   90 (181)
                      .|+++|++++||.|..|++.|.+...|..|+++|   .++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788999999999999999999999999999985   56788764

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=8.1e-10  Score=64.49  Aligned_cols=42  Identities=12%  Similarity=-0.046  Sum_probs=38.3

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      .+++|+++++|.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35789999999999999999999999999998  5789999887

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=3.9e-11  Score=76.49  Aligned_cols=52  Identities=8%  Similarity=0.097  Sum_probs=48.4

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTT   65 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C   65 (181)
                      +.|+++|.....|..       +++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus        22 ~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           22 SKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            579999999888876       7899999999999999999999999999999999987

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=3e-10  Score=66.24  Aligned_cols=42  Identities=12%  Similarity=0.048  Sum_probs=37.8

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            488999999999999999999999999999998  467788875

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.6e-10  Score=64.71  Aligned_cols=41  Identities=7%  Similarity=0.017  Sum_probs=36.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAP   89 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~   89 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++|  .++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4888999999999999999999999999999984  5677664

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=3.2e-10  Score=66.12  Aligned_cols=42  Identities=7%  Similarity=-0.013  Sum_probs=37.7

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++  +.++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            478899999999999999999999999999998  457787765

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=2.8e-10  Score=66.35  Aligned_cols=42  Identities=7%  Similarity=0.006  Sum_probs=37.8

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      +|+++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            488899999999999999999999999999998  457788875

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=9.7e-10  Score=64.14  Aligned_cols=42  Identities=5%  Similarity=-0.021  Sum_probs=37.1

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++|  .++|.|+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3678999999999999999999999999999984  57787764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.85  E-value=1.9e-09  Score=58.60  Aligned_cols=33  Identities=18%  Similarity=0.499  Sum_probs=30.8

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCCCccC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK   62 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C   62 (181)
                      +||.|..|++.|.....|..|+++|+++++|.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999999999999999999999863

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.1e-10  Score=65.28  Aligned_cols=41  Identities=10%  Similarity=-0.010  Sum_probs=37.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAP   89 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~   89 (181)
                      .|+++|++++||.|..|++.|.....|..|+++  ..++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            588999999999999999999999999999997  56888775

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=3.1e-10  Score=66.32  Aligned_cols=42  Identities=10%  Similarity=0.033  Sum_probs=37.7

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      +|+++|++++||.|..|++.|.....|..|+++  ..++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            588999999999999999999999999999998  457787764

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=5.5e-10  Score=64.53  Aligned_cols=41  Identities=10%  Similarity=0.002  Sum_probs=36.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAP   89 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~   89 (181)
                      +|+++|++++||.|..|++.|.....|..|+++|  .++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5889999999999999999999999999999984  4667663

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.5e-10  Score=64.82  Aligned_cols=41  Identities=7%  Similarity=0.054  Sum_probs=36.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAP   89 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~   89 (181)
                      .|+++|++++||.|..|++.|.+...|..|+++|  .++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999999999999999999984  5667664

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=5e-10  Score=64.57  Aligned_cols=41  Identities=7%  Similarity=0.043  Sum_probs=36.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAP   89 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~   89 (181)
                      .|+++|+++++|.|..|++.|.+...|..|+++|  .++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5888999999999999999999999999999984  5677664

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.83  E-value=3.1e-09  Score=68.73  Aligned_cols=53  Identities=11%  Similarity=0.248  Sum_probs=47.0

Q ss_pred             CCCCCCCCCchhHHHHhh-hcCCC-cceeCCcccccCCChHHHHHhHHh-hcCCCC
Q 037433            7 QVGSDHSSSDENEVKELD-TSSAK-RSYECTFCKRGFTNAQALGGHMNI-HRKDRA   59 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~-~h~~~-kp~~C~~C~k~F~~~~~L~~H~~~-H~gekp   59 (181)
                      +.|+++|.....|..|++ .|+++ ++|.|.+|++.|.....|..|+++ |..+.|
T Consensus        19 ~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           19 YICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             TTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            579999999999999997 78875 899999999999999999999997 555555

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.1e-10  Score=63.86  Aligned_cols=40  Identities=10%  Similarity=0.140  Sum_probs=35.2

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIA   88 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c   88 (181)
                      +|+++|++++||.|..|++.|.....|..|+++|  .++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4788999999999999999999999999999984  456654

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=7.2e-10  Score=64.63  Aligned_cols=42  Identities=7%  Similarity=-0.036  Sum_probs=37.9

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      ++++|+++++|.|..|++.|.....|..|+++  ..++|.|++|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46789999999999999999999999999998  4678999887

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=5.7e-10  Score=65.00  Aligned_cols=42  Identities=10%  Similarity=0.071  Sum_probs=37.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAPI   90 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~~   90 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++|  .++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4889999999999999999999999999999984  56787764

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4.4e-10  Score=65.64  Aligned_cols=41  Identities=7%  Similarity=0.037  Sum_probs=36.9

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAP   89 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~   89 (181)
                      +|+++|++++||.|..|++.|.....|..|+++  ..++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            588999999999999999999999999999998  45678775

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2e-09  Score=62.19  Aligned_cols=41  Identities=12%  Similarity=0.079  Sum_probs=36.4

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAP   89 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~   89 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++|  .++|.|+
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4788999999999999999999999999999984  5777764

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=8.3e-10  Score=63.74  Aligned_cols=41  Identities=5%  Similarity=0.006  Sum_probs=36.5

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAP   89 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~   89 (181)
                      .|+++|+++++|.|..|++.|.....|..|+++|  .++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5889999999999999999999999999999984  5677664

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1e-09  Score=62.68  Aligned_cols=39  Identities=8%  Similarity=0.038  Sum_probs=34.6

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIA   88 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c   88 (181)
                      |+++|++++||.|..|++.|...+.|..|++++  .++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            788999999999999999999999999999984  456654

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=2.2e-09  Score=62.28  Aligned_cols=41  Identities=15%  Similarity=0.068  Sum_probs=37.2

Q ss_pred             HhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCCC
Q 037433           52 NIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPISS   92 (181)
Q Consensus        52 ~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~   92 (181)
                      .+|++++||.|..|++.|.....|..|+++  ..++|.|++|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            368999999999999999999999999998  57789999985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=8.1e-10  Score=63.06  Aligned_cols=39  Identities=10%  Similarity=0.049  Sum_probs=35.0

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIA   88 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c   88 (181)
                      |+++|++++||.|..|++.|.+...|..|+++  +.++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            77899999999999999999999999999987  4667755

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=3e-09  Score=58.89  Aligned_cols=35  Identities=23%  Similarity=0.486  Sum_probs=30.8

Q ss_pred             hhcCCCcceeCCcccccCCCh-HHHHHhHHhhcCCC
Q 037433           24 DTSSAKRSYECTFCKRGFTNA-QALGGHMNIHRKDR   58 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~-~~L~~H~~~H~gek   58 (181)
                      ++|+++++|.|..|++.|... ..|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            468889999999999999998 99999999998865

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=4.1e-09  Score=58.68  Aligned_cols=36  Identities=28%  Similarity=0.409  Sum_probs=33.0

Q ss_pred             cCCCcceeCC--cccccCCChHHHHHhHHhhcCCCCcc
Q 037433           26 SSAKRSYECT--FCKRGFTNAQALGGHMNIHRKDRAKA   61 (181)
Q Consensus        26 h~~~kp~~C~--~C~k~F~~~~~L~~H~~~H~gekp~~   61 (181)
                      |+++++|.|.  .|++.|.....|..|+++|+++++|.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            6789999999  59999999999999999999999873

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.77  E-value=1.2e-09  Score=62.29  Aligned_cols=39  Identities=10%  Similarity=0.058  Sum_probs=34.7

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIA   88 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c   88 (181)
                      |+++|++++||.|..|++.|.....|..|++++  .++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            678999999999999999999999999999984  566655

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=3.9e-09  Score=58.10  Aligned_cols=35  Identities=29%  Similarity=0.572  Sum_probs=31.4

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      +.|+++++|.|.+|++.|.....|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            36788999999999999999999999999998875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5.2e-09  Score=59.41  Aligned_cols=33  Identities=18%  Similarity=0.365  Sum_probs=29.7

Q ss_pred             hcCCCcceeCCc--ccccCCChHHHHHhHHhhcCC
Q 037433           25 TSSAKRSYECTF--CKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        25 ~h~~~kp~~C~~--C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      .+++++||.|.+  |++.|.....|.+|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            468899999986  999999999999999999986

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=4.9e-09  Score=57.66  Aligned_cols=35  Identities=23%  Similarity=0.618  Sum_probs=31.4

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      ++|+++++|.|.+|++.|.....|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            36889999999999999999999999999998865

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=5.2e-09  Score=57.40  Aligned_cols=35  Identities=20%  Similarity=0.461  Sum_probs=31.5

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      .+|+++++|.|.+|++.|.....|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            36888999999999999999999999999999875

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.1e-09  Score=61.96  Aligned_cols=41  Identities=10%  Similarity=0.088  Sum_probs=36.4

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      ++++|+++++|.|..|++.|.+...|..|+++  ..++|.|.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            46789999999999999999999999999998  467888865

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=7.9e-09  Score=56.65  Aligned_cols=34  Identities=24%  Similarity=0.514  Sum_probs=30.4

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      +|+++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5788899999999999999999999999998875

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.7e-09  Score=62.55  Aligned_cols=40  Identities=13%  Similarity=0.106  Sum_probs=35.1

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIA   88 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c   88 (181)
                      .|+++|++++||.|..|++.|.+...|..|+++|  .++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            5889999999999999999999999999999985  455543

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.8e-09  Score=62.26  Aligned_cols=40  Identities=8%  Similarity=0.045  Sum_probs=35.9

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIA   88 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c   88 (181)
                      .|+++|++++||.|..|++.|.....|..|+++|  .++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            5889999999999999999999999999999984  566766

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=6.7e-09  Score=57.72  Aligned_cols=34  Identities=21%  Similarity=0.384  Sum_probs=29.8

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHh-HHhhcCC
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGH-MNIHRKD   57 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H-~~~H~ge   57 (181)
                      ++|++++||.|..|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            578889999999999999999999999 8888865

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.2e-08  Score=56.05  Aligned_cols=34  Identities=24%  Similarity=0.713  Sum_probs=30.7

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      .|+++++|.|.+|++.|.....|..|+++|+++|
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            5778899999999999999999999999999875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.69  E-value=4.6e-09  Score=58.08  Aligned_cols=34  Identities=12%  Similarity=-0.024  Sum_probs=32.0

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |+++|++++||+|..|++.|.....|..|++++.
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            7889999999999999999999999999999864

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.6e-09  Score=61.97  Aligned_cols=42  Identities=12%  Similarity=-0.047  Sum_probs=37.8

Q ss_pred             hHHhhcCCCCccCC--CCCCCCCCCchhHHHHHh--cCCCCCCCCC
Q 037433           50 HMNIHRKDRAKAKQ--TTGPSFITSNPMLTHEDY--MNPRYIAPIS   91 (181)
Q Consensus        50 H~~~H~gekp~~C~--~C~k~F~~~~~L~~H~~~--~~~~~~c~~~   91 (181)
                      |.++|+++++|.|.  .|++.|.....|..|+++  ..++|.|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56789999999998  899999999999999998  4678999887

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.68  E-value=8.6e-09  Score=60.95  Aligned_cols=35  Identities=20%  Similarity=0.518  Sum_probs=28.4

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHH-hhcCCCC
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMN-IHRKDRA   59 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~-~H~gekp   59 (181)
                      +|++++||.|.+|++.|.....|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5788999999999999999999999999 8988754

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.68  E-value=8e-09  Score=59.35  Aligned_cols=39  Identities=8%  Similarity=-0.138  Sum_probs=34.7

Q ss_pred             HhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCC
Q 037433           52 NIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPI   90 (181)
Q Consensus        52 ~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~   90 (181)
                      ++|+++++|.|..|++.|.....|..|+++  ..++|.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            468999999999999999999999999998  467788864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=3.8e-09  Score=61.26  Aligned_cols=40  Identities=13%  Similarity=0.087  Sum_probs=35.3

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIAP   89 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c~   89 (181)
                      +.++|+++++|.|..|++.|.....|..|+++|  .++|.|+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            456899999999999999999999999999984  5678775

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.62  E-value=2.1e-08  Score=55.64  Aligned_cols=34  Identities=21%  Similarity=0.504  Sum_probs=30.5

Q ss_pred             hcCCCcceeCCc--ccccCCChHHHHHhHHhhcCCC
Q 037433           25 TSSAKRSYECTF--CKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        25 ~h~~~kp~~C~~--C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      .|+++++|.|.+  |++.|.....|..|+++|+++|
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478899999985  9999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.59  E-value=9.8e-09  Score=60.30  Aligned_cols=39  Identities=21%  Similarity=0.537  Sum_probs=31.8

Q ss_pred             HHHhhhcCCCcceeCC--cccccCCChHHHHHhHHhhcCCC
Q 037433           20 VKELDTSSAKRSYECT--FCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        20 ~~h~~~h~~~kp~~C~--~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      ..|..+|++++||.|.  .|++.|.....|..|+++|+++|
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4455678888999996  59999999999999999888865

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=1.6e-08  Score=59.44  Aligned_cols=40  Identities=20%  Similarity=0.100  Sum_probs=36.5

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCCC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPISS   92 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~   92 (181)
                      .|+++++|.|..|++.|.....|..|+++  ..++|.|++|+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            47889999999999999999999999998  46789999997

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=1.6e-08  Score=57.20  Aligned_cols=37  Identities=19%  Similarity=0.130  Sum_probs=32.4

Q ss_pred             HhhcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCCC
Q 037433           52 NIHRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYIA   88 (181)
Q Consensus        52 ~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~c   88 (181)
                      ++|+++++|.|..|++.|.....|..|+++|  .++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4789999999999999999999999999984  456654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.53  E-value=3.2e-09  Score=57.17  Aligned_cols=31  Identities=23%  Similarity=0.417  Sum_probs=28.8

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCCCc
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDRAK   60 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~   60 (181)
                      +||.|..|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999999987

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.53  E-value=3.7e-08  Score=55.14  Aligned_cols=32  Identities=19%  Similarity=0.277  Sum_probs=24.5

Q ss_pred             cCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCC
Q 037433           26 SSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQT   64 (181)
Q Consensus        26 h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~   64 (181)
                      ++++|||.|..|+|.|.....|..|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            46778888888888888888888887       666643

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=5.4e-08  Score=58.71  Aligned_cols=37  Identities=14%  Similarity=0.189  Sum_probs=34.7

Q ss_pred             CCCCCCCCCchhHHHHhh-hcCCCcceeCCcccccCCC
Q 037433            7 QVGSDHSSSDENEVKELD-TSSAKRSYECTFCKRGFTN   43 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~-~h~~~kp~~C~~C~k~F~~   43 (181)
                      +.|+++|.....|.+|++ +|+++++|.|.+|++.|..
T Consensus        16 ~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           16 QSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            579999999999999997 9999999999999999975

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.49  E-value=8.5e-08  Score=49.76  Aligned_cols=30  Identities=27%  Similarity=0.790  Sum_probs=26.7

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998865

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=1.9e-07  Score=59.37  Aligned_cols=34  Identities=24%  Similarity=0.356  Sum_probs=28.2

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      .+++++||.|..|++.|.....|..|+++|++++
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            4677888888888888888888888888888764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.46  E-value=2.2e-09  Score=67.04  Aligned_cols=47  Identities=4%  Similarity=0.008  Sum_probs=39.6

Q ss_pred             HHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCCCCCCC
Q 037433           47 LGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPISSDTSR   96 (181)
Q Consensus        47 L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~~~   96 (181)
                      |..|+++|++++||.|..|++.|.....|.   ++  +.++|.|++|+....
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~   50 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVE   50 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCE
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccc
Confidence            456889999999999999999999887776   44  568899999997653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=2.6e-08  Score=54.92  Aligned_cols=34  Identities=15%  Similarity=0.103  Sum_probs=30.7

Q ss_pred             HHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           51 MNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        51 ~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      +++|++++||.|..|++.|.....|..|+++|..
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            3579999999999999999999999999998653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.44  E-value=1.4e-07  Score=48.63  Aligned_cols=29  Identities=31%  Similarity=0.749  Sum_probs=25.3

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47899999999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.43  E-value=1.1e-07  Score=49.12  Aligned_cols=29  Identities=21%  Similarity=0.561  Sum_probs=25.4

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57899999999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.41  E-value=1.3e-07  Score=48.67  Aligned_cols=29  Identities=28%  Similarity=0.633  Sum_probs=26.3

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      +||.|..|++.|.....|..|+++|+++|
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            57999999999999999999999998875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=2.7e-08  Score=55.16  Aligned_cols=33  Identities=15%  Similarity=-0.092  Sum_probs=29.8

Q ss_pred             HHhhcCCCCccCCCCCCCCCCCchhHHH-HHhcC
Q 037433           51 MNIHRKDRAKAKQTTGPSFITSNPMLTH-EDYMN   83 (181)
Q Consensus        51 ~~~H~gekp~~C~~C~k~F~~~~~L~~H-~~~~~   83 (181)
                      |++|++++||+|..|++.|.....|..| +++|.
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            3579999999999999999999999999 77764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.40  E-value=3.7e-08  Score=55.15  Aligned_cols=31  Identities=16%  Similarity=0.188  Sum_probs=27.8

Q ss_pred             hcCCCCccCCCCCCCCCCCchhHHHHHhcCCCCCCC
Q 037433           54 HRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRYIAP   89 (181)
Q Consensus        54 H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~~~~c~   89 (181)
                      ++++|||.|..|+|+|.+.++|++|+     +|.|.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-----py~C~   33 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-----AYYCS   33 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-----HHTST
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-----CeECc
Confidence            57899999999999999999999998     56554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.38  E-value=2.1e-07  Score=49.41  Aligned_cols=30  Identities=27%  Similarity=0.597  Sum_probs=24.4

Q ss_pred             CcceeCC--cccccCCChHHHHHhHHhhcCCC
Q 037433           29 KRSYECT--FCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        29 ~kp~~C~--~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4678888  78888888888888888888764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=1.6e-07  Score=48.30  Aligned_cols=29  Identities=28%  Similarity=0.666  Sum_probs=22.7

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46788888888888888888888887764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.37  E-value=2.2e-07  Score=48.97  Aligned_cols=29  Identities=31%  Similarity=0.777  Sum_probs=25.2

Q ss_pred             cceeCC--cccccCCChHHHHHhHHhhcCCC
Q 037433           30 RSYECT--FCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        30 kp~~C~--~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      +||.|.  .|++.|.....|..|+++|+++|
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            578897  89999999999999999998875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.36  E-value=2.4e-07  Score=47.94  Aligned_cols=30  Identities=17%  Similarity=0.579  Sum_probs=24.5

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCCC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDRA   59 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gekp   59 (181)
                      ++|.|..|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            478888888888888888888888887754

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.35  E-value=1e-07  Score=51.59  Aligned_cols=32  Identities=9%  Similarity=-0.031  Sum_probs=29.2

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      +|+++++|.|..|++.|.+...|..|+++|..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            47899999999999999999999999998653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.35  E-value=9.7e-08  Score=56.27  Aligned_cols=33  Identities=12%  Similarity=0.065  Sum_probs=28.7

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHH-hcCCC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHED-YMNPR   85 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~-~~~~~   85 (181)
                      +|+++|||.|..|++.|.....|+.|++ +|...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            5899999999999999999999999999 76443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.34  E-value=1.2e-07  Score=51.52  Aligned_cols=32  Identities=13%  Similarity=-0.022  Sum_probs=29.3

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      +|++++||.|..|++.|.....|..|+++|..
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            48899999999999999999999999998653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1.2e-07  Score=53.68  Aligned_cols=32  Identities=9%  Similarity=-0.142  Sum_probs=28.6

Q ss_pred             hhcCCCCccCCC--CCCCCCCCchhHHHHHhcCC
Q 037433           53 IHRKDRAKAKQT--TGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        53 ~H~gekp~~C~~--C~k~F~~~~~L~~H~~~~~~   84 (181)
                      .++++|||+|..  |+++|...+.|+.|+++|..
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            368999999986  99999999999999998753

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=6.4e-08  Score=50.23  Aligned_cols=29  Identities=28%  Similarity=0.701  Sum_probs=23.8

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      +||.|..|++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47888888888888888888888887764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=3e-07  Score=58.96  Aligned_cols=38  Identities=8%  Similarity=-0.065  Sum_probs=31.1

Q ss_pred             hhcCCCCccCCC--CCCCCCCCchhHHHH-Hh--cCCCCCCCC
Q 037433           53 IHRKDRAKAKQT--TGPSFITSNPMLTHE-DY--MNPRYIAPI   90 (181)
Q Consensus        53 ~H~gekp~~C~~--C~k~F~~~~~L~~H~-~~--~~~~~~c~~   90 (181)
                      .++++|||+|..  |+++|.+.++|+.|+ ++  ..+||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            368999999965  999999999999998 45  467775543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=6.7e-08  Score=50.33  Aligned_cols=30  Identities=33%  Similarity=0.784  Sum_probs=23.9

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      ++||.|..|++.|.....|..|+++|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            367888888888888888888888887754

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.32  E-value=1.9e-07  Score=52.08  Aligned_cols=34  Identities=9%  Similarity=0.047  Sum_probs=29.1

Q ss_pred             hcCCCCccCCCCCCCCCCCchhHHHHHhc--CCCCC
Q 037433           54 HRKDRAKAKQTTGPSFITSNPMLTHEDYM--NPRYI   87 (181)
Q Consensus        54 H~gekp~~C~~C~k~F~~~~~L~~H~~~~--~~~~~   87 (181)
                      |++++||.|..|++.|...+.|..|+++|  .++|.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            67899999999999999999999999985  45553

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.32  E-value=3e-07  Score=47.13  Aligned_cols=28  Identities=25%  Similarity=0.688  Sum_probs=23.0

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRK   56 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~g   56 (181)
                      +++|.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4678888888888888888888888764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.31  E-value=3.4e-07  Score=46.65  Aligned_cols=27  Identities=19%  Similarity=0.613  Sum_probs=21.7

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhc
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            467888888888888888888888774

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=1.7e-07  Score=51.59  Aligned_cols=32  Identities=13%  Similarity=-0.006  Sum_probs=29.3

Q ss_pred             HhhcCCCCccCCCCCCCCCCC-chhHHHHHhcC
Q 037433           52 NIHRKDRAKAKQTTGPSFITS-NPMLTHEDYMN   83 (181)
Q Consensus        52 ~~H~gekp~~C~~C~k~F~~~-~~L~~H~~~~~   83 (181)
                      ++|++++||.|..|++.|... ..|..|+++|.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            478999999999999999999 99999999863

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=2.7e-07  Score=47.22  Aligned_cols=27  Identities=26%  Similarity=0.685  Sum_probs=21.5

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhc
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            467888888888888888888887764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.25  E-value=5.9e-07  Score=45.50  Aligned_cols=27  Identities=33%  Similarity=0.885  Sum_probs=21.5

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcCC
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            578888888888888888888888763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.24  E-value=4.5e-07  Score=47.10  Aligned_cols=29  Identities=34%  Similarity=0.729  Sum_probs=22.6

Q ss_pred             cceeCCcccccCCChHHHHHh-HHhhcCCC
Q 037433           30 RSYECTFCKRGFTNAQALGGH-MNIHRKDR   58 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H-~~~H~gek   58 (181)
                      +||.|..|++.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            467888888888888888888 67787764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=2.3e-07  Score=50.71  Aligned_cols=31  Identities=3%  Similarity=-0.092  Sum_probs=28.9

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      .|++++||+|..|++.|.....|..|+++|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            5899999999999999999999999999864

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=2.5e-07  Score=50.42  Aligned_cols=32  Identities=3%  Similarity=-0.152  Sum_probs=29.3

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      +|++++||.|..|++.|.....|..|+++|..
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            58999999999999999999999999998643

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=4.6e-07  Score=49.27  Aligned_cols=31  Identities=10%  Similarity=0.155  Sum_probs=28.8

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +|+++++|.|..|++.|.....|..|+++|.
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            5789999999999999999999999999864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=2.7e-07  Score=50.37  Aligned_cols=31  Identities=6%  Similarity=-0.204  Sum_probs=28.7

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      .|++++||.|..|++.|.....|..|+++|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            5889999999999999999999999999864

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.18  E-value=1.7e-07  Score=54.80  Aligned_cols=37  Identities=8%  Similarity=-0.089  Sum_probs=32.0

Q ss_pred             HHhHHhhcCCCCccCC--CCCCCCCCCchhHHHHHhcCC
Q 037433           48 GGHMNIHRKDRAKAKQ--TTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        48 ~~H~~~H~gekp~~C~--~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      ..|..+|++++||.|.  .|++.|...+.|+.|+++|..
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            4556679999999995  799999999999999998653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=7.7e-07  Score=48.49  Aligned_cols=32  Identities=6%  Similarity=-0.018  Sum_probs=29.0

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      .|+++++|.|..|++.|.....|..|+++|..
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            47889999999999999999999999998653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.08  E-value=2.1e-07  Score=62.34  Aligned_cols=46  Identities=4%  Similarity=-0.038  Sum_probs=39.2

Q ss_pred             hHHhhcCCCCccCCCCCCCCCCCchhHHHHHh--cCCCCCCCCCCCCC
Q 037433           50 HMNIHRKDRAKAKQTTGPSFITSNPMLTHEDY--MNPRYIAPISSDTS   95 (181)
Q Consensus        50 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~--~~~~~~c~~~~~~~   95 (181)
                      |.++|++++||.|..|++.|.....|..|+++  ..++|.|..|....
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~~   63 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRK   63 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhHH
Confidence            35679999999999999999999999999998  46789898776433

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.35  E-value=4.6e-07  Score=45.70  Aligned_cols=25  Identities=28%  Similarity=0.741  Sum_probs=14.6

Q ss_pred             cceeCCcccccCCChHHHHHhHHhh
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIH   54 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H   54 (181)
                      +||.|..|++.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3555666666666666666665554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.07  E-value=4e-06  Score=53.14  Aligned_cols=33  Identities=18%  Similarity=0.110  Sum_probs=29.8

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHHhcCCC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPR   85 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~~   85 (181)
                      .|+++|||+|..|+|.|.+...|+.|+++|...
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            478899999999999999999999999997553

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.05  E-value=1.4e-06  Score=48.02  Aligned_cols=30  Identities=13%  Similarity=0.212  Sum_probs=27.2

Q ss_pred             hcCCCCccCC--CCCCCCCCCchhHHHHHhcC
Q 037433           54 HRKDRAKAKQ--TTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        54 H~gekp~~C~--~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |++++||.|.  .|++.|...+.|+.|+++|.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   32 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhC
Confidence            6789999999  59999999999999999853

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=1.1e-06  Score=44.69  Aligned_cols=26  Identities=8%  Similarity=-0.086  Sum_probs=24.3

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhc
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      ++||.|..|++.|.....|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            58999999999999999999999876

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.01  E-value=8.2e-07  Score=45.32  Aligned_cols=26  Identities=8%  Similarity=-0.133  Sum_probs=24.2

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhc
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      ++||.|..|++.|...+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            58999999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.99  E-value=3.9e-06  Score=44.97  Aligned_cols=26  Identities=15%  Similarity=0.094  Sum_probs=23.9

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |||.|..|++.|...+.|..|+++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~   26 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHE   26 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhC
Confidence            68999999999999999999999853

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.97  E-value=3.5e-06  Score=43.08  Aligned_cols=27  Identities=33%  Similarity=0.673  Sum_probs=22.8

Q ss_pred             cceeCC--cccccCCChHHHHHhHHhhcC
Q 037433           30 RSYECT--FCKRGFTNAQALGGHMNIHRK   56 (181)
Q Consensus        30 kp~~C~--~C~k~F~~~~~L~~H~~~H~g   56 (181)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            478888  899999999999999888864

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.21  E-value=1e-06  Score=44.33  Aligned_cols=25  Identities=16%  Similarity=0.263  Sum_probs=23.3

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhc
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      |||.|..|++.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            6899999999999999999999875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.95  E-value=2.1e-06  Score=47.22  Aligned_cols=31  Identities=10%  Similarity=0.124  Sum_probs=27.8

Q ss_pred             hhcCCCCccCC--CCCCCCCCCchhHHHHHhcC
Q 037433           53 IHRKDRAKAKQ--TTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        53 ~H~gekp~~C~--~C~k~F~~~~~L~~H~~~~~   83 (181)
                      .|++++||.|.  .|++.|...+.|..|+++|.
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            37899999998  49999999999999999864

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.93  E-value=2.1e-06  Score=43.75  Aligned_cols=27  Identities=22%  Similarity=0.172  Sum_probs=24.6

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ++||.|..|++.|.....|..|+++|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            579999999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.87  E-value=9.7e-06  Score=41.16  Aligned_cols=26  Identities=8%  Similarity=0.023  Sum_probs=23.8

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |||.|..|++.|.....|..|+++|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhc
Confidence            68999999999999999999998853

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.86  E-value=1.7e-06  Score=55.93  Aligned_cols=49  Identities=16%  Similarity=0.106  Sum_probs=43.3

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      ..|+++|. ...|..|+ .|.+++|+.|..|++.|.. ..|..|+++|++++
T Consensus        21 ~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           21 QHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             SSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             cccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            35888884 88999999 9999999999999999875 88999999998875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.85  E-value=1.2e-05  Score=42.29  Aligned_cols=28  Identities=14%  Similarity=0.325  Sum_probs=25.3

Q ss_pred             CCCccCC--CCCCCCCCCchhHHHHHhcCC
Q 037433           57 DRAKAKQ--TTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        57 ekp~~C~--~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      ++||.|.  .|++.|.....|..|+++|..
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            5899999  899999999999999998753

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=4.8e-06  Score=42.73  Aligned_cols=27  Identities=15%  Similarity=0.174  Sum_probs=24.9

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ++||.|..|++.|.....|..|+++|.
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhc
Confidence            589999999999999999999999864

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.82  E-value=8.2e-06  Score=41.61  Aligned_cols=26  Identities=12%  Similarity=0.091  Sum_probs=24.1

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +||.|..|++.|.....|..|+++|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhc
Confidence            58999999999999999999999864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.80  E-value=1.3e-05  Score=41.05  Aligned_cols=27  Identities=15%  Similarity=-0.027  Sum_probs=24.4

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      ++|.|..|++.|.....|..|++++..
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc
Confidence            589999999999999999999998643

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.78  E-value=6.2e-06  Score=42.15  Aligned_cols=26  Identities=15%  Similarity=0.036  Sum_probs=24.1

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |||.|..|++.|.....|..|+++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            68999999999999999999999864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.97  E-value=3.5e-06  Score=43.46  Aligned_cols=27  Identities=7%  Similarity=0.020  Sum_probs=24.5

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ++||.|..|++.|.....|..|+++|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            479999999999999999999998764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.90  E-value=4.6e-06  Score=42.81  Aligned_cols=26  Identities=12%  Similarity=0.232  Sum_probs=23.8

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +||.|..|++.|.....|..|+++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            58999999999999999999998764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.71  E-value=1.3e-05  Score=40.27  Aligned_cols=25  Identities=12%  Similarity=0.127  Sum_probs=22.4

Q ss_pred             CccCCCCCCCCCCCchhHHHHHhcC
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ||.|..|++.|.....|..|+++|.
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            6899999999999999999999864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.70  E-value=1.5e-05  Score=41.57  Aligned_cols=27  Identities=19%  Similarity=0.191  Sum_probs=24.2

Q ss_pred             CCccCC--CCCCCCCCCchhHHHHHhcCC
Q 037433           58 RAKAKQ--TTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        58 kp~~C~--~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      +||.|.  .|++.|...+.|..|+++|..
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            689998  999999999999999998653

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.64  E-value=2.4e-05  Score=40.14  Aligned_cols=26  Identities=15%  Similarity=0.243  Sum_probs=23.0

Q ss_pred             CCccCCCCCCCCCCCchhHHH-HHhcC
Q 037433           58 RAKAKQTTGPSFITSNPMLTH-EDYMN   83 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H-~~~~~   83 (181)
                      +||.|..|++.|.....|..| +++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHcc
Confidence            589999999999999999999 56654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.59  E-value=1.4e-05  Score=40.65  Aligned_cols=26  Identities=19%  Similarity=0.181  Sum_probs=23.8

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +||.|..|++.|.....|..|+++|.
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhc
Confidence            58999999999999999999999863

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.57  E-value=3.1e-06  Score=44.97  Aligned_cols=26  Identities=19%  Similarity=0.096  Sum_probs=23.8

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |||.|..|++.|...+.|..|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~   26 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAF   26 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHc
Confidence            68999999999999999999998854

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.48  E-value=9.6e-05  Score=46.31  Aligned_cols=45  Identities=13%  Similarity=0.071  Sum_probs=31.3

Q ss_pred             ccccCCChHHHHHhHH-hhcCCC------CccCC--CCCCCCCCCchhHHHHHh
Q 037433           37 CKRGFTNAQALGGHMN-IHRKDR------AKAKQ--TTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        37 C~k~F~~~~~L~~H~~-~H~gek------p~~C~--~C~k~F~~~~~L~~H~~~   81 (181)
                      |++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|+++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            7777777777777763 576655      67774  677776666777777765

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.42  E-value=2.8e-05  Score=39.45  Aligned_cols=26  Identities=15%  Similarity=0.158  Sum_probs=23.8

Q ss_pred             CCccCC--CCCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQ--TTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~--~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ++|.|.  .|++.|...+.|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            589999  99999999999999999864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.08  E-value=0.00084  Score=41.89  Aligned_cols=47  Identities=15%  Similarity=0.191  Sum_probs=41.4

Q ss_pred             CCCCCCCCchhHHHHh-hhcCCCc------ceeCC--cccccCCChHHHHHhHHhh
Q 037433            8 VGSDHSSSDENEVKEL-DTSSAKR------SYECT--FCKRGFTNAQALGGHMNIH   54 (181)
Q Consensus         8 ~c~~sf~~~s~L~~h~-~~h~~~k------p~~C~--~C~k~F~~~~~L~~H~~~H   54 (181)
                      .|++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            6999999999999998 5788766      89997  5999999999999999863

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.71  E-value=0.00036  Score=49.45  Aligned_cols=29  Identities=21%  Similarity=0.356  Sum_probs=16.6

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHH
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMN   52 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~   52 (181)
                      ..|+|+++|.|..|++.|.+...|..|++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            34555555666666666666665555554

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.59  E-value=0.00025  Score=50.28  Aligned_cols=31  Identities=16%  Similarity=-0.045  Sum_probs=28.2

Q ss_pred             HHhhcCCCCccCCCCCCCCCCCchhHHHHHh
Q 037433           51 MNIHRKDRAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        51 ~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      ...|+|+++|.|..|++.|.+...|..|+++
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            3468999999999999999999999999876

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.70  E-value=0.0064  Score=43.04  Aligned_cols=23  Identities=13%  Similarity=0.267  Sum_probs=20.8

Q ss_pred             CcceeCCcccccCCChHHHHHhH
Q 037433           29 KRSYECTFCKRGFTNAQALGGHM   51 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~   51 (181)
                      .+++.|.+|...|.....+..|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHH
Confidence            46789999999999999999998

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.78  E-value=0.013  Score=34.01  Aligned_cols=23  Identities=35%  Similarity=0.587  Sum_probs=14.8

Q ss_pred             cceeCCcccccCCChHHHHHhHH
Q 037433           30 RSYECTFCKRGFTNAQALGGHMN   52 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~   52 (181)
                      -+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            35666666666666666666665

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.04  E-value=0.048  Score=31.68  Aligned_cols=24  Identities=17%  Similarity=0.188  Sum_probs=22.4

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHh
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      -+|.|+.|++.|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            578999999999999999999995

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=89.69  E-value=0.31  Score=35.52  Aligned_cols=20  Identities=10%  Similarity=-0.044  Sum_probs=8.8

Q ss_pred             CccCCCCCCCCCCCchhHHHH
Q 037433           59 AKAKQTTGPSFITSNPMLTHE   79 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~   79 (181)
                      +..|+.|+..+ ....|..|+
T Consensus       110 ~v~C~~C~~~~-~r~~l~~H~  129 (170)
T 3hcs_A          110 LMDCPQCQRPF-QKFHINIHI  129 (170)
T ss_dssp             EEECTTTCCEE-EGGGHHHHH
T ss_pred             eeECCCCChHH-HHHHHHHHh
Confidence            33455554444 233344454

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=87.80  E-value=0.11  Score=32.82  Aligned_cols=59  Identities=17%  Similarity=0.258  Sum_probs=35.4

Q ss_pred             HHHHhhhcCCCcceeC-CcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHH
Q 037433           19 EVKELDTSSAKRSYEC-TFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHED   80 (181)
Q Consensus        19 L~~h~~~h~~~kp~~C-~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~   80 (181)
                      |..|+ .+-...+..| ..|+..+.+ ..|..|+...-..+...|..|+..|... .|..|..
T Consensus         5 l~~H~-~~C~~~~v~C~~~C~~~v~r-~~l~~H~~~~C~~r~v~C~~C~~~~~~~-~l~~H~~   64 (76)
T 2yuc_A            5 SSGHL-NTCSFNVIPCPNRCPMKLSR-RDLPAHLQHDCPKRRLKCEFCGCDFSGE-AYESHEG   64 (76)
T ss_dssp             CSCCC-CCCCCSCCBCTTCCSCBCCS-SSSTTTTTTSCTTSCCCCSSSCCCCCHH-HHHHTTT
T ss_pred             HHHHH-HHCCCcccCCCccccHHhhH-hHHHhhCHhhCCCcceECCCCCCccCHH-HHHHHHh
Confidence            44454 3344556677 468776654 3366666544455667788888777643 4555553

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=87.77  E-value=0.52  Score=27.17  Aligned_cols=31  Identities=10%  Similarity=-0.018  Sum_probs=19.5

Q ss_pred             CccCCCCCCCCCCCchhHHHHHhcCCCCCCCCCCCCC
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDYMNPRYIAPISSDTS   95 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~~~~~~~c~~~~~~~   95 (181)
                      -|+|..||+.|+....      ..-+...||+|++.-
T Consensus         3 iY~C~rCg~~fs~~el------~~lP~IrCpyCGyri   33 (48)
T 4ayb_P            3 VYRCGKCWKTFTDEQL------KVLPGVRCPYCGYKI   33 (48)
T ss_dssp             --CCCCTTTTCCCCCS------CCCSSSCCTTTCCSC
T ss_pred             EEEeeccCCCccHHHH------hhCCCcccCccCcEE
Confidence            4788888888876532      123556788888653

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=83.54  E-value=1.4  Score=23.85  Aligned_cols=26  Identities=15%  Similarity=0.273  Sum_probs=20.2

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhh
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIH   54 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H   54 (181)
                      ...+.|..|...|.....+..|++..
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             cCcCeeccccceehhhHHHhhhheec
Confidence            34578888888888888888887643

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=82.87  E-value=0.68  Score=24.49  Aligned_cols=23  Identities=26%  Similarity=0.680  Sum_probs=20.2

Q ss_pred             ceeCCcccccCCChHHHHHhHHh
Q 037433           31 SYECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      ...|.+|.+.|+.-.+|..|++-
T Consensus         9 kqhcrfckkkysdvknlikhire   31 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRD   31 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            35799999999999999999874

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=82.62  E-value=0.7  Score=24.85  Aligned_cols=22  Identities=23%  Similarity=0.523  Sum_probs=19.3

Q ss_pred             ceeCCcccccCCChHHHHHhHH
Q 037433           31 SYECTFCKRGFTNAQALGGHMN   52 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~   52 (181)
                      .|.|++|.+.|.....|..|-.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHH
Confidence            5899999999999999999865

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=82.22  E-value=0.79  Score=31.12  Aligned_cols=12  Identities=17%  Similarity=0.266  Sum_probs=8.0

Q ss_pred             CCccCCCCCCCC
Q 037433           58 RAKAKQTTGPSF   69 (181)
Q Consensus        58 kp~~C~~C~k~F   69 (181)
                      .||+|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            566677777666

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=82.13  E-value=0.92  Score=31.66  Aligned_cols=71  Identities=18%  Similarity=0.119  Sum_probs=45.9

Q ss_pred             CCCCCCCCCchhHHHHh--hhcCCC-cceeCCcc------cccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHH
Q 037433            7 QVGSDHSSSDENEVKEL--DTSSAK-RSYECTFC------KRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLT   77 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~--~~h~~~-kp~~C~~C------~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~   77 (181)
                      ..|..+|...+.+..|.  +.|... +.+.+..+      ++.|...    .+...+...+.|.|..|.+.|.+...+..
T Consensus        36 ~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f~s~~~~~~  111 (127)
T 1zu1_A           36 KVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTFSSPVVAES  111 (127)
T ss_dssp             TTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEECSSHHHHHH
T ss_pred             cCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEeCCHHHHHH
Confidence            46888899888888887  455432 33333111      1222211    12234566788999999999999999988


Q ss_pred             HHHh
Q 037433           78 HEDY   81 (181)
Q Consensus        78 H~~~   81 (181)
                      |...
T Consensus       112 H~~g  115 (127)
T 1zu1_A          112 HYIG  115 (127)
T ss_dssp             HHTS
T ss_pred             HHCC
Confidence            8753

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=81.08  E-value=0.88  Score=33.02  Aligned_cols=68  Identities=12%  Similarity=0.101  Sum_probs=50.4

Q ss_pred             chhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcCCCC
Q 037433           16 DENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNPRY   86 (181)
Q Consensus        16 ~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~~~   86 (181)
                      ...+..|. ..-..++..|..|+..+ ....|..|....-..+...|+.|+..|.. ..|..|..+....+
T Consensus        96 ~~~l~~H~-~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~  163 (170)
T 3hcs_A           96 LRHLEDHQ-AHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLAL  163 (170)
T ss_dssp             GGGHHHHH-TTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC--
T ss_pred             HhHHHHHH-hcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChh
Confidence            35677776 34456788999999887 56669999987788888899999988765 46789988744433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	181
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-15

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 64.3 bits (157), Expect = 2e-15
 Identities = 23/33 (69%), Positives = 29/33 (87%)

Query: 30 RSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK 62
          RSY C+FCKR F +AQALGGHMN+HR+DRA+ +
Sbjct: 4  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	181
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.69
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.37
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.37
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.36
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.32
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.22
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.22
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.22
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.16
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.16
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.15
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.13
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.1
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.09
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.08
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.07
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.05
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.05
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.01
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.01
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.91
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.89
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.89
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.89
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.83
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.78
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.66
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.64
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.63
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.61
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.59
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.58
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.56
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.46
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.42
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.36
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.36
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.3
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.28
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.26
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.22
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.16
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.14
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.07
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.82
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.79
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.76
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.53
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.5
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.49
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.47
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.4
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.32
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.3
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.23
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.2
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.14
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.12
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.08
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.95
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.94
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.91
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.88
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.86
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.78
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.72
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.7
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.66
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.65
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.61
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.5
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.22
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.05
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.81
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.79
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.72
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.68
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.53
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.4
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.36
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.26
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.22
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.77
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.48
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.48
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.24
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.2
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.13
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.08
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.92
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.79
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.55
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.52
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	90.42
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	90.27
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	90.15
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	90.0
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.43
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	89.37
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	88.44
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.12
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	87.68
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	86.97
d1y0jb1	36	U-shaped transcription factor, different fingers {	86.51
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.41
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	85.27
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	83.94
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	82.92
d1y0jb1	36	U-shaped transcription factor, different fingers {	82.79
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	81.96
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	81.76

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=5.6e-18  Score=102.84  Aligned_cols=53  Identities=23%  Similarity=0.433  Sum_probs=51.0

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhc
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      ||||.|. ||+.|.....|..|+++|+++|||.|..|+++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 9999999999999999999999999999999999999999999875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.6e-13  Score=77.11  Aligned_cols=37  Identities=30%  Similarity=0.738  Sum_probs=34.3

Q ss_pred             CCcceeCCcccccCCChHHHHHhHH-hhcCCCCccCCC
Q 037433           28 AKRSYECTFCKRGFTNAQALGGHMN-IHRKDRAKAKQT   64 (181)
Q Consensus        28 ~~kp~~C~~C~k~F~~~~~L~~H~~-~H~gekp~~C~~   64 (181)
                      .+|||.|..|++.|....+|..|++ +|+++|||+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4799999999999999999999986 799999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=7.3e-14  Score=78.39  Aligned_cols=37  Identities=22%  Similarity=0.520  Sum_probs=33.7

Q ss_pred             HHhhhcCCCcceeCCcccccCCChHHHHHhHHhhcCC
Q 037433           21 KELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        21 ~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      +|+++|+++|||.|..|||+|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5788999999999999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.1e-13  Score=83.37  Aligned_cols=47  Identities=23%  Similarity=0.458  Sum_probs=45.7

Q ss_pred             CCCCCCCCchhHHHHhhhcCCCcceeCCcccccCCChHHHHHhHHhh
Q 037433            8 VGSDHSSSDENEVKELDTSSAKRSYECTFCKRGFTNAQALGGHMNIH   54 (181)
Q Consensus         8 ~c~~sf~~~s~L~~h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H   54 (181)
                      +|+++|.....|..|+++|++++||.|.+|+++|.....|..|+++|
T Consensus         7 ~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           7 QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            49999999999999999999999999999999999999999999987

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=4e-13  Score=72.65  Aligned_cols=33  Identities=24%  Similarity=0.598  Sum_probs=30.8

Q ss_pred             hcCCCcceeCCcccccCCChHHHHHhHHhhcCC
Q 037433           25 TSSAKRSYECTFCKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        25 ~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      +|+++|||.|..|+++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=3e-12  Score=70.73  Aligned_cols=34  Identities=24%  Similarity=0.550  Sum_probs=28.0

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHHhhcCC
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      |+|+|+|||+|.+|+++|.....|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5788888888888888888888888888888764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=2.5e-12  Score=71.51  Aligned_cols=35  Identities=23%  Similarity=0.465  Sum_probs=22.3

Q ss_pred             HhhhcCCCcceeCCcccccCCChHHHHHhHHhhcC
Q 037433           22 ELDTSSAKRSYECTFCKRGFTNAQALGGHMNIHRK   56 (181)
Q Consensus        22 h~~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~g   56 (181)
                      |.|+|+|+|||.|.+|++.|.....|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            45666666666666666666666666666666653

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=1.1e-12  Score=73.06  Aligned_cols=35  Identities=14%  Similarity=0.040  Sum_probs=32.8

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +|.++|+|+|||+|..|+++|.++++|..|+++|.
T Consensus         1 gh~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            47899999999999999999999999999999874

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.16  E-value=7.5e-12  Score=65.65  Aligned_cols=29  Identities=31%  Similarity=0.749  Sum_probs=27.7

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      |||.|.+|++.|++...|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=9.8e-12  Score=67.95  Aligned_cols=32  Identities=31%  Similarity=0.672  Sum_probs=27.9

Q ss_pred             cCCCcceeCCcccccCCChHHHHHhHHhhcCC
Q 037433           26 SSAKRSYECTFCKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        26 h~~~kp~~C~~C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      |+|+|||.|.+|++.|++..+|++|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68889999999999999999999999888865

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=2.4e-12  Score=72.04  Aligned_cols=35  Identities=20%  Similarity=0.163  Sum_probs=33.3

Q ss_pred             HhHHhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           49 GHMNIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        49 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +|+++|+++|||.|..|||+|.+.++|..|+++|.
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   36 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT   36 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCC
Confidence            58999999999999999999999999999999875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.13  E-value=4.3e-12  Score=74.15  Aligned_cols=42  Identities=24%  Similarity=0.555  Sum_probs=37.3

Q ss_pred             chhHHHHhhhcCCCcceeCCc--ccccCCChHHHHHhHHhhcCCC
Q 037433           16 DENEVKELDTSSAKRSYECTF--CKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        16 ~s~L~~h~~~h~~~kp~~C~~--C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      .+.+.+|+. |++++||.|.+  |++.|....+|..|+++|+|+|
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            356777774 99999999988  9999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.9e-11  Score=63.96  Aligned_cols=29  Identities=21%  Similarity=0.685  Sum_probs=26.9

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      |||.|.+|++.|.+.+.|.+|+++|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=9.4e-12  Score=68.67  Aligned_cols=33  Identities=12%  Similarity=0.107  Sum_probs=30.8

Q ss_pred             HhhcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           52 NIHRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        52 ~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      |+|+|+|||+|..|+++|.+.++|+.|+++|+.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            589999999999999999999999999999654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=2.3e-11  Score=63.09  Aligned_cols=28  Identities=25%  Similarity=0.757  Sum_probs=25.3

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRK   56 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~g   56 (181)
                      ||||.|.+|++.|.+..+|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=66.26  Aligned_cols=33  Identities=27%  Similarity=0.567  Sum_probs=30.9

Q ss_pred             ceeCCc--ccccCCChHHHHHhHHhhcCCCCccCC
Q 037433           31 SYECTF--CKRGFTNAQALGGHMNIHRKDRAKAKQ   63 (181)
Q Consensus        31 p~~C~~--C~k~F~~~~~L~~H~~~H~gekp~~C~   63 (181)
                      .|.|.+  |++.|.+...|++|+++|+|+|||+|.
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            378987  999999999999999999999999996

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=1.7e-11  Score=66.11  Aligned_cols=31  Identities=19%  Similarity=0.330  Sum_probs=29.6

Q ss_pred             hhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           53 IHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        53 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ||+++|||+|..|+++|.+.+.|..|+++|.
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            6999999999999999999999999999975

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=4.7e-11  Score=65.72  Aligned_cols=30  Identities=30%  Similarity=0.603  Sum_probs=22.3

Q ss_pred             hhcCCCcceeCCcccccCCChHHHHHhHHh
Q 037433           24 DTSSAKRSYECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        24 ~~h~~~kp~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      ++|+|+|||.|.+|++.|++..+|+.|++.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccc
Confidence            467777777777777777777777777654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=3e-11  Score=65.95  Aligned_cols=31  Identities=13%  Similarity=0.025  Sum_probs=29.3

Q ss_pred             hcCCCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           54 HRKDRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        54 H~gekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      |+|+|||+|.+|+|+|.++++|++|+++|..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            7999999999999999999999999999854

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=2.7e-11  Score=66.73  Aligned_cols=32  Identities=16%  Similarity=0.098  Sum_probs=29.2

Q ss_pred             HhhcCCCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           52 NIHRKDRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        52 ~~H~gekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ++|+|||||+|..|+++|.++++|+.|++.++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            58999999999999999999999999987643

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=3.6e-10  Score=59.41  Aligned_cols=28  Identities=25%  Similarity=0.762  Sum_probs=26.0

Q ss_pred             cceeCCc--ccccCCChHHHHHhHHhhcCC
Q 037433           30 RSYECTF--CKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        30 kp~~C~~--C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      |||.|.+  |++.|++..+|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899988  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.3e-10  Score=59.58  Aligned_cols=28  Identities=36%  Similarity=0.815  Sum_probs=26.3

Q ss_pred             cceeCCc--ccccCCChHHHHHhHHhhcCC
Q 037433           30 RSYECTF--CKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        30 kp~~C~~--C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      |||.|.+  |++.|++..+|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999988  999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3e-10  Score=57.47  Aligned_cols=26  Identities=31%  Similarity=0.726  Sum_probs=22.6

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhc
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      |||+|..|||+|...+.|..|+++||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68889889999999999999988885

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4.6e-10  Score=59.49  Aligned_cols=29  Identities=31%  Similarity=0.760  Sum_probs=26.7

Q ss_pred             cceeCCc--ccccCCChHHHHHhHHhhcCCC
Q 037433           30 RSYECTF--CKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        30 kp~~C~~--C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      |||.|.+  |++.|++..+|++|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6899965  9999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=5.1e-10  Score=62.46  Aligned_cols=35  Identities=11%  Similarity=0.102  Sum_probs=31.4

Q ss_pred             CCCCccCCCCCCCCCCCchhHHHHH-h--cCCCCCCCC
Q 037433           56 KDRAKAKQTTGPSFITSNPMLTHED-Y--MNPRYIAPI   90 (181)
Q Consensus        56 gekp~~C~~C~k~F~~~~~L~~H~~-~--~~~~~~c~~   90 (181)
                      -+|||+|..||++|.+.++|+.|++ +  +++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4799999999999999999999986 4  788998875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=5.7e-10  Score=57.68  Aligned_cols=27  Identities=15%  Similarity=0.090  Sum_probs=25.5

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ||||+|..|+|+|.++++|.+|+++|.
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            799999999999999999999999874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.66  E-value=3.7e-09  Score=54.92  Aligned_cols=27  Identities=37%  Similarity=0.853  Sum_probs=24.8

Q ss_pred             cceeCCc--ccccCCChHHHHHhHHhhcC
Q 037433           30 RSYECTF--CKRGFTNAQALGGHMNIHRK   56 (181)
Q Consensus        30 kp~~C~~--C~k~F~~~~~L~~H~~~H~g   56 (181)
                      |||.|.+  |+|.|++..+|++|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.64  E-value=7.5e-09  Score=54.99  Aligned_cols=28  Identities=29%  Similarity=0.701  Sum_probs=19.3

Q ss_pred             CcceeCCc--ccccCCChHHHHHhHHhhcC
Q 037433           29 KRSYECTF--CKRGFTNAQALGGHMNIHRK   56 (181)
Q Consensus        29 ~kp~~C~~--C~k~F~~~~~L~~H~~~H~g   56 (181)
                      +|||.|.+  |+|.|++..+|++|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46677766  77777777777777777664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=2.5e-09  Score=53.96  Aligned_cols=25  Identities=12%  Similarity=0.262  Sum_probs=24.1

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhc
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      |||+|..|||+|.+.+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            7999999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=2e-09  Score=62.48  Aligned_cols=38  Identities=8%  Similarity=-0.022  Sum_probs=33.1

Q ss_pred             HHHHhHHhhcCCCCccCCC--CCCCCCCCchhHHHHHhcCC
Q 037433           46 ALGGHMNIHRKDRAKAKQT--TGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        46 ~L~~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~~~~   84 (181)
                      .|..|+ .|+++|||+|.+  |+++|...++|+.|+++|..
T Consensus         6 ~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_           6 SIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             SGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hhcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            456677 499999999977  99999999999999999753

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1e-08  Score=53.31  Aligned_cols=27  Identities=15%  Similarity=0.116  Sum_probs=25.1

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      |||.|..|+++|.++++|.+|+++|..
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            799999999999999999999999753

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.59  E-value=7.6e-09  Score=53.83  Aligned_cols=27  Identities=11%  Similarity=0.076  Sum_probs=25.1

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      |||.|.+|+++|.+.+.|++|+++|..
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC
Confidence            799999999999999999999999753

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=5.2e-09  Score=57.21  Aligned_cols=30  Identities=17%  Similarity=0.295  Sum_probs=28.3

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCcceeCCc
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYECTF   36 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~C~~   36 (181)
                      +.|+++|.+.++|.+|+++|+++|||.|.+
T Consensus         7 ~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           7 PACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             TTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             CCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            579999999999999999999999999974

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=8.6e-09  Score=52.97  Aligned_cols=26  Identities=35%  Similarity=0.848  Sum_probs=15.4

Q ss_pred             cceeCCc--ccccCCChHHHHHhHHhhc
Q 037433           30 RSYECTF--CKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        30 kp~~C~~--C~k~F~~~~~L~~H~~~H~   55 (181)
                      |||.|.+  |+|.|++..+|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4566655  6666666666666666554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=3.4e-08  Score=52.38  Aligned_cols=29  Identities=14%  Similarity=0.354  Sum_probs=26.4

Q ss_pred             CCCccCCC--CCCCCCCCchhHHHHHhcCCC
Q 037433           57 DRAKAKQT--TGPSFITSNPMLTHEDYMNPR   85 (181)
Q Consensus        57 ekp~~C~~--C~k~F~~~~~L~~H~~~~~~~   85 (181)
                      ||||.|.+  |+|+|.+.++|++|+++|.+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            69999976  999999999999999998754

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=4.6e-08  Score=47.30  Aligned_cols=26  Identities=27%  Similarity=0.602  Sum_probs=22.4

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcC
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRK   56 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~g   56 (181)
                      |++|.+|++.|+++..|+.||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56789999999999999999988876

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.42  E-value=7.4e-08  Score=48.00  Aligned_cols=27  Identities=26%  Similarity=0.685  Sum_probs=20.9

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhc
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      +|||.|.+||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            577888888888888888888877775

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.2e-07  Score=48.55  Aligned_cols=26  Identities=15%  Similarity=0.043  Sum_probs=23.7

Q ss_pred             CCccCCC--CCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQT--TGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~--C~k~F~~~~~L~~H~~~~~   83 (181)
                      |||.|..  |+|+|++.++|++|+++|.
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7999976  9999999999999999873

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=7.9e-08  Score=50.15  Aligned_cols=27  Identities=11%  Similarity=0.016  Sum_probs=24.7

Q ss_pred             CCccCCC--CCCCCCCCchhHHHHHhcCC
Q 037433           58 RAKAKQT--TGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        58 kp~~C~~--C~k~F~~~~~L~~H~~~~~~   84 (181)
                      |||+|..  |+|+|.+.++|++|+++|..
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            7999987  99999999999999999753

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.9e-07  Score=48.29  Aligned_cols=33  Identities=18%  Similarity=0.452  Sum_probs=30.2

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCCCCcc
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKDRAKA   61 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~   61 (181)
                      .+...|..|||.|.....|.+|...|++||||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            456789999999999999999999999999984

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.28  E-value=2.6e-07  Score=49.96  Aligned_cols=31  Identities=74%  Similarity=1.368  Sum_probs=28.1

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCCCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKDRA   59 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp   59 (181)
                      .+.|+|.+|++.|...++|.+||+.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            3679999999999999999999999988764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=1.2e-07  Score=47.22  Aligned_cols=27  Identities=19%  Similarity=0.186  Sum_probs=25.4

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ||||.|.+||+.|+.+...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            699999999999999999999999875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=1.1e-07  Score=49.59  Aligned_cols=26  Identities=15%  Similarity=0.074  Sum_probs=23.9

Q ss_pred             CCccCCC--CCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQT--TGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~--C~k~F~~~~~L~~H~~~~~   83 (181)
                      |||.|.+  |+|+|.+.++|++|+++|.
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccccC
Confidence            7999976  9999999999999999864

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=3.4e-07  Score=48.06  Aligned_cols=27  Identities=19%  Similarity=0.191  Sum_probs=24.3

Q ss_pred             CCccCC--CCCCCCCCCchhHHHHHhcCC
Q 037433           58 RAKAKQ--TTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        58 kp~~C~--~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      |||.|.  .|+|+|++.++|+.|+++|..
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            799995  699999999999999999754

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=6.9e-07  Score=43.91  Aligned_cols=27  Identities=22%  Similarity=0.493  Sum_probs=24.7

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcCC
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      -+.|..|||+|...+.|++|+.+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            468999999999999999999999986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.07  E-value=2.8e-07  Score=47.60  Aligned_cols=26  Identities=19%  Similarity=0.128  Sum_probs=23.6

Q ss_pred             CCccCCC--CCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQT--TGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~--C~k~F~~~~~L~~H~~~~~   83 (181)
                      |||+|..  |+|+|.+.++|++|+++|.
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            7999966  9999999999999999863

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=2.8e-06  Score=40.88  Aligned_cols=25  Identities=16%  Similarity=0.232  Sum_probs=22.8

Q ss_pred             CccCCCCCCCCCCCchhHHHHHhcC
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |.+|.+|+|.|++++.|+-|++.|.
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            5789999999999999999999764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=5.9e-06  Score=40.71  Aligned_cols=29  Identities=28%  Similarity=0.608  Sum_probs=23.6

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      ++||+|.+|...-.+.+.|..|.+.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57888888888888888888888888874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=9.1e-06  Score=40.19  Aligned_cols=27  Identities=26%  Similarity=0.447  Sum_probs=25.2

Q ss_pred             eeCCcccccCCChHHHHHhHHhhcCCC
Q 037433           32 YECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      |.|..|+......+.|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=8.1e-06  Score=41.10  Aligned_cols=29  Identities=21%  Similarity=0.563  Sum_probs=21.6

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      +|||.|.+|+..|+++..+.-|.+.|-|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46777777777777777777777777653

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=2.9e-05  Score=38.94  Aligned_cols=26  Identities=23%  Similarity=0.713  Sum_probs=19.8

Q ss_pred             cceeCCc--ccccCCChHHHHHhHHhhc
Q 037433           30 RSYECTF--CKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        30 kp~~C~~--C~k~F~~~~~L~~H~~~H~   55 (181)
                      |||.|.+  |+|.++..+.|++|++.+.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5788876  8888888888888877643

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=4.1e-05  Score=36.89  Aligned_cols=26  Identities=27%  Similarity=0.523  Sum_probs=23.8

Q ss_pred             eCCcccccCCChHHHHHhHHhhcCCC
Q 037433           33 ECTFCKRGFTNAQALGGHMNIHRKDR   58 (181)
Q Consensus        33 ~C~~C~k~F~~~~~L~~H~~~H~gek   58 (181)
                      .|..|.+.|..+..|+.|-+.|+|+|
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58999999999999999999999986

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.49  E-value=2.4e-05  Score=38.75  Aligned_cols=28  Identities=29%  Similarity=0.682  Sum_probs=25.3

Q ss_pred             cceeCCc--ccccCCChHHHHHhHHhhcCC
Q 037433           30 RSYECTF--CKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        30 kp~~C~~--C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      |||.|.+  |.|+|.....|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5889976  999999999999999999985

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=1.4e-05  Score=40.20  Aligned_cols=28  Identities=14%  Similarity=0.156  Sum_probs=25.5

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhcCC
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYMNP   84 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~~~   84 (181)
                      +|||.|++|..+|..++-+..|.+.|..
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            6899999999999999999999998654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.40  E-value=5.9e-05  Score=35.79  Aligned_cols=24  Identities=38%  Similarity=0.969  Sum_probs=19.2

Q ss_pred             eeCCcccccCCChHHHHHhHHhhc
Q 037433           32 YECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      |+|..|.+.|..+++|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578888888888888888888774

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=7.3e-05  Score=36.40  Aligned_cols=26  Identities=27%  Similarity=0.735  Sum_probs=21.6

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhc
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      |||+|..|..+-...+.|..|++||.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68888888888888888888888875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=2.7e-05  Score=42.22  Aligned_cols=26  Identities=8%  Similarity=0.058  Sum_probs=19.5

Q ss_pred             cCCCCccCCCCCCCCCCCchhHHHHH
Q 037433           55 RKDRAKAKQTTGPSFITSNPMLTHED   80 (181)
Q Consensus        55 ~gekp~~C~~C~k~F~~~~~L~~H~~   80 (181)
                      +|-|||.|..|+|.|.+.+++.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46678888888888888877777754

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=3.3e-05  Score=37.94  Aligned_cols=27  Identities=15%  Similarity=-0.009  Sum_probs=24.2

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      ++||+|+.|..+-...+.|..|++.|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCcceeeecccccCCchheEEeeeccc
Confidence            689999999988888999999999865

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=4.9e-05  Score=38.44  Aligned_cols=26  Identities=31%  Similarity=0.735  Sum_probs=15.4

Q ss_pred             cceeCCc--ccccCCChHHHHHhH-Hhhc
Q 037433           30 RSYECTF--CKRGFTNAQALGGHM-NIHR   55 (181)
Q Consensus        30 kp~~C~~--C~k~F~~~~~L~~H~-~~H~   55 (181)
                      |||.|.+  |.|+|++.+.-..|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4566655  666666666666665 4454

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.14  E-value=0.0002  Score=35.27  Aligned_cols=29  Identities=24%  Similarity=0.574  Sum_probs=26.6

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      +..|.|..|...|.+.-.|+.||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            46799999999999999999999999985

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00014  Score=39.29  Aligned_cols=26  Identities=23%  Similarity=0.668  Sum_probs=23.8

Q ss_pred             CCCcceeCCcccccCCChHHHHHhHH
Q 037433           27 SAKRSYECTFCKRGFTNAQALGGHMN   52 (181)
Q Consensus        27 ~~~kp~~C~~C~k~F~~~~~L~~H~~   52 (181)
                      +|-|||.|.+|+|.|-....+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            57899999999999999999999964

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00022  Score=35.25  Aligned_cols=24  Identities=17%  Similarity=-0.033  Sum_probs=12.6

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHh
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      |||.|+.|....+..++|+.|+++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            355555555555555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0001  Score=35.89  Aligned_cols=26  Identities=12%  Similarity=-0.028  Sum_probs=24.0

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhc
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      .|||+|..|..+-...++|++|+|+|
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCCcccccccchhcchhhHhhhhhcc
Confidence            38999999999999999999999986

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00011  Score=36.78  Aligned_cols=26  Identities=4%  Similarity=0.110  Sum_probs=22.8

Q ss_pred             CCccCCC--CCCCCCCCchhHHHHHhcC
Q 037433           58 RAKAKQT--TGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        58 kp~~C~~--C~k~F~~~~~L~~H~~~~~   83 (181)
                      |||.|.+  |+|++...++|++|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            6999965  9999999999999999743

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00014  Score=37.25  Aligned_cols=27  Identities=7%  Similarity=0.038  Sum_probs=25.2

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCCccee
Q 037433            7 QVGSDHSSSDENEVKELDTSSAKRSYE   33 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~kp~~   33 (181)
                      ..|+|.|.+...|.+|..+|+++|||.
T Consensus         9 e~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           9 EICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             TTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             HHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            579999999999999999999999983

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00036  Score=34.31  Aligned_cols=23  Identities=35%  Similarity=0.785  Sum_probs=19.2

Q ss_pred             ceeCCcccccCCChHHHHHhHHh
Q 037433           31 SYECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      ||.|..|...|..+.+|..||..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68888888888888888888874

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.86  E-value=0.00032  Score=34.44  Aligned_cols=25  Identities=32%  Similarity=0.747  Sum_probs=18.3

Q ss_pred             cceeCCc--ccccCCChHHHHHhHHhh
Q 037433           30 RSYECTF--CKRGFTNAQALGGHMNIH   54 (181)
Q Consensus        30 kp~~C~~--C~k~F~~~~~L~~H~~~H   54 (181)
                      .||+|..  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677765  777777777777777766

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.78  E-value=0.00036  Score=35.16  Aligned_cols=26  Identities=38%  Similarity=0.765  Sum_probs=20.1

Q ss_pred             ceeCCcccccCCChHHHHHhHH-hhcC
Q 037433           31 SYECTFCKRGFTNAQALGGHMN-IHRK   56 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~-~H~g   56 (181)
                      ||.|.+|++.|++..-|.+|+. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            6888888888888888888865 3544

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.72  E-value=0.00034  Score=33.07  Aligned_cols=24  Identities=13%  Similarity=0.141  Sum_probs=22.1

Q ss_pred             ccCCCCCCCCCCCchhHHHHHhcC
Q 037433           60 KAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        60 ~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999863

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.70  E-value=0.00021  Score=35.12  Aligned_cols=25  Identities=12%  Similarity=0.045  Sum_probs=22.3

Q ss_pred             CCccCC--CCCCCCCCCchhHHHHHhc
Q 037433           58 RAKAKQ--TTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        58 kp~~C~--~C~k~F~~~~~L~~H~~~~   82 (181)
                      .||+|+  .|+++|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            589995  6999999999999999875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00071  Score=33.39  Aligned_cols=26  Identities=19%  Similarity=0.660  Sum_probs=23.0

Q ss_pred             cceeCCcccccCCChHHHHHhHHhhc
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      +||.|.+|...-...++|+.|+++-.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            68999999999999999999998743

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.00041  Score=33.76  Aligned_cols=23  Identities=0%  Similarity=-0.143  Sum_probs=21.4

Q ss_pred             CCCCCCCCCchhHHHHhhhcCCC
Q 037433            7 QVGSDHSSSDENEVKELDTSSAK   29 (181)
Q Consensus         7 ~~c~~sf~~~s~L~~h~~~h~~~   29 (181)
                      .+|+|+|...+.|.+|..+|+|+
T Consensus         6 ~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           6 AECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             TTTCCEESSHHHHHHHGGGTSCC
T ss_pred             HHHhHHHHHHHHHHHHhhcccCC
Confidence            47999999999999999999985

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.0004  Score=34.96  Aligned_cols=25  Identities=8%  Similarity=0.104  Sum_probs=21.7

Q ss_pred             CCccCCC--CCCCCCCCchhHHHH-Hhc
Q 037433           58 RAKAKQT--TGPSFITSNPMLTHE-DYM   82 (181)
Q Consensus        58 kp~~C~~--C~k~F~~~~~L~~H~-~~~   82 (181)
                      |||.|+.  |.|+|+..+...+|+ |+|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            6999965  999999999999997 554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00097  Score=35.38  Aligned_cols=26  Identities=35%  Similarity=0.677  Sum_probs=16.5

Q ss_pred             CcceeCCc--ccccCCChHHHHHhHHhh
Q 037433           29 KRSYECTF--CKRGFTNAQALGGHMNIH   54 (181)
Q Consensus        29 ~kp~~C~~--C~k~F~~~~~L~~H~~~H   54 (181)
                      +|||.|..  |+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            56666643  666666666666666555

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.00057  Score=33.58  Aligned_cols=23  Identities=17%  Similarity=0.034  Sum_probs=21.8

Q ss_pred             CccCCCCCCCCCCCchhHHHHHh
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      ||.|..|.-+|..+.+|.+||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            78999999999999999999986

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.00079  Score=35.73  Aligned_cols=28  Identities=14%  Similarity=0.242  Sum_probs=24.7

Q ss_pred             CCCCccC--CCCCCCCCCCchhHHHHHhcC
Q 037433           56 KDRAKAK--QTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        56 gekp~~C--~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      .+|||.|  +.|+.+|.+...|..|.+.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4799999  789999999999999988753

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0021  Score=31.46  Aligned_cols=24  Identities=8%  Similarity=-0.068  Sum_probs=22.3

Q ss_pred             ccCCCCCCCCCCCchhHHHHHhcC
Q 037433           60 KAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        60 ~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |.|+.|+......+-|++|++.|.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             ccccccCcccCCHHHHHHHHHHhc
Confidence            789999999999999999999875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.79  E-value=0.0014  Score=34.91  Aligned_cols=28  Identities=11%  Similarity=0.069  Sum_probs=24.7

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHhcCCC
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDYMNPR   85 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~~~~~   85 (181)
                      +.|.|..|++.|.+...|--||+.|.+.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            6799999999999999999999887543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.72  E-value=0.001  Score=31.39  Aligned_cols=22  Identities=9%  Similarity=0.142  Sum_probs=16.5

Q ss_pred             CccCCCCCCCCCCCchhHHHHH
Q 037433           59 AKAKQTTGPSFITSNPMLTHED   80 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~   80 (181)
                      ||+|..|...|.++..|+.||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6777777777777777777763

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.0036  Score=30.68  Aligned_cols=24  Identities=25%  Similarity=0.668  Sum_probs=18.9

Q ss_pred             cceeCCcccccCCChHHHHHhHHh
Q 037433           30 RSYECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        30 kp~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      +||+|.+|..--++.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            578888888777888888888764

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.53  E-value=0.0036  Score=30.00  Aligned_cols=24  Identities=33%  Similarity=0.706  Sum_probs=20.2

Q ss_pred             eeCCc--ccccCCChHHHHHhHHhhc
Q 037433           32 YECTF--CKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        32 ~~C~~--C~k~F~~~~~L~~H~~~H~   55 (181)
                      |.|.+  |+++|+....|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            67766  9999999999999988776

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.40  E-value=0.002  Score=32.32  Aligned_cols=23  Identities=9%  Similarity=0.141  Sum_probs=21.4

Q ss_pred             CccCCCCCCCCCCCchhHHHHHh
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      ||.|.+|++.|++.+-|-+|.+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            79999999999999999999876

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.36  E-value=0.0055  Score=28.86  Aligned_cols=22  Identities=36%  Similarity=0.917  Sum_probs=17.5

Q ss_pred             eeCCcccccCCChHHHHHhHHh
Q 037433           32 YECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        32 ~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      |.|.+|-+.|+++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888888765

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.26  E-value=0.0053  Score=29.48  Aligned_cols=22  Identities=23%  Similarity=0.534  Sum_probs=14.7

Q ss_pred             ceeCCcccccCCChHHHHHhHH
Q 037433           31 SYECTFCKRGFTNAQALGGHMN   52 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~   52 (181)
                      ||+|..|||.|-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5667777777777777766654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.0051  Score=31.72  Aligned_cols=20  Identities=30%  Similarity=0.305  Sum_probs=17.6

Q ss_pred             cccCCChHHHHHhHHhhcCC
Q 037433           38 KRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        38 ~k~F~~~~~L~~H~~~H~ge   57 (181)
                      ++.|.....|..|+|+||||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45699999999999999986

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.77  E-value=0.0039  Score=29.37  Aligned_cols=24  Identities=13%  Similarity=0.081  Sum_probs=21.5

Q ss_pred             ccCCCCCCCCCCCchhHHHHHhcC
Q 037433           60 KAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        60 ~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |.|++|-|.|.+++++..|.++.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999998743

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.48  E-value=0.0081  Score=28.82  Aligned_cols=23  Identities=17%  Similarity=0.290  Sum_probs=20.5

Q ss_pred             CccCCCCCCCCCCCchhHHHHHh
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      ||+|..|||.+-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999988754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.48  E-value=0.017  Score=27.81  Aligned_cols=25  Identities=28%  Similarity=0.430  Sum_probs=17.2

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhc
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHR   55 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~   55 (181)
                      |-+|..|....+.+.+|+.|.++|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3457777777777777777777764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.24  E-value=0.016  Score=28.72  Aligned_cols=28  Identities=25%  Similarity=0.707  Sum_probs=24.4

Q ss_pred             cceeCCc--ccccCCChHHHHHhHHhhcCC
Q 037433           30 RSYECTF--CKRGFTNAQALGGHMNIHRKD   57 (181)
Q Consensus        30 kp~~C~~--C~k~F~~~~~L~~H~~~H~ge   57 (181)
                      |.|.|.+  |+-.|...-.|..|+-.||||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            5688987  999999999999999989886

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.20  E-value=0.017  Score=29.47  Aligned_cols=26  Identities=19%  Similarity=0.520  Sum_probs=21.6

Q ss_pred             ceeCCcccccCCChHHHHHhHHhhcC
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIHRK   56 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H~g   56 (181)
                      .|.|..|+|.|++...+.+|-..-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58999999999999999998765544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.13  E-value=0.016  Score=27.50  Aligned_cols=25  Identities=4%  Similarity=-0.179  Sum_probs=22.6

Q ss_pred             CCCCCCCCCCchhHHHHhhhcCCCc
Q 037433            6 KQVGSDHSSSDENEVKELDTSSAKR   30 (181)
Q Consensus         6 ~~~c~~sf~~~s~L~~h~~~h~~~k   30 (181)
                      -+.|.++|..+.-|..|.+.|+|++
T Consensus         3 cp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             CcchHHHHHHhHhhhhccccccCCC
Confidence            3679999999999999999999985

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.08  E-value=0.016  Score=27.11  Aligned_cols=22  Identities=32%  Similarity=0.765  Sum_probs=20.7

Q ss_pred             ceeCCcccccCCChHHHHHhHH
Q 037433           31 SYECTFCKRGFTNAQALGGHMN   52 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~   52 (181)
                      ||+|.-|...|-.+..|..||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999985

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.0085  Score=28.93  Aligned_cols=25  Identities=12%  Similarity=0.028  Sum_probs=22.5

Q ss_pred             CccCCCCCCCCCCCchhHHHHHhcC
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      |-+|+.|..+.+++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999874

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.0075  Score=29.52  Aligned_cols=24  Identities=8%  Similarity=-0.092  Sum_probs=20.7

Q ss_pred             CCccCCCCCCCCCCCchhHHHHHh
Q 037433           58 RAKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      +||+|..|.---.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            699999998777788999999875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.023  Score=31.47  Aligned_cols=24  Identities=33%  Similarity=0.610  Sum_probs=17.1

Q ss_pred             ceeCCcccccCCChHHHHHhHHhh
Q 037433           31 SYECTFCKRGFTNAQALGGHMNIH   54 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~H   54 (181)
                      -|.|-.|+|.|+....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            366777777777777777776655

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.52  E-value=0.045  Score=26.60  Aligned_cols=25  Identities=8%  Similarity=0.036  Sum_probs=21.2

Q ss_pred             CCccC--CCCCCCCCCCchhHHHHHhc
Q 037433           58 RAKAK--QTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        58 kp~~C--~~C~k~F~~~~~L~~H~~~~   82 (181)
                      |||.|  ..|.|.|.+..+|.+|.-+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~th   27 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTH   27 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhccc
Confidence            68888  46999999999999997654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.42  E-value=0.059  Score=29.75  Aligned_cols=24  Identities=21%  Similarity=0.198  Sum_probs=21.4

Q ss_pred             CccCCCCCCCCCCCchhHHHHHhc
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDYM   82 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~~   82 (181)
                      -|.|..|+|.|.....|+.|..-|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            478999999999999999998763

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.27  E-value=0.069  Score=27.93  Aligned_cols=25  Identities=16%  Similarity=0.266  Sum_probs=14.7

Q ss_pred             CcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCC
Q 037433           29 KRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTG   66 (181)
Q Consensus        29 ~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~   66 (181)
                      ++-|.|.+||.             +|.|+-|-+|++|+
T Consensus         3 ~~~~vC~vCGy-------------i~~g~~Pe~CPvCg   27 (36)
T d1yuza2           3 DKFHLCPICGY-------------IHKGEDFEKCPICF   27 (36)
T ss_dssp             CCEEECSSSCC-------------EEESSCCSBCTTTC
T ss_pred             CCEEECCCCCC-------------EeeCCCCCcCCCCC
Confidence            34566777763             34455566666665

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.15  E-value=0.064  Score=28.23  Aligned_cols=13  Identities=8%  Similarity=0.059  Sum_probs=7.1

Q ss_pred             hcCCCCccCCCCC
Q 037433           54 HRKDRAKAKQTTG   66 (181)
Q Consensus        54 H~gekp~~C~~C~   66 (181)
                      +.++-|-+|++|+
T Consensus        15 ~~g~~P~~CPvCg   27 (37)
T d1nnqa2          15 AVDEAPEYCPVCG   27 (37)
T ss_dssp             EESCCCSBCTTTC
T ss_pred             ecCCCCCcCCCCC
Confidence            3445555666665

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.00  E-value=0.031  Score=28.52  Aligned_cols=23  Identities=30%  Similarity=0.375  Sum_probs=20.4

Q ss_pred             CccCCCCCCCCCCCchhHHHHHh
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      .|.|..|+|.|.+...+.+|...
T Consensus         4 afvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhhh
Confidence            58999999999999998888765

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.43  E-value=0.055  Score=27.66  Aligned_cols=19  Identities=5%  Similarity=-0.039  Sum_probs=16.9

Q ss_pred             CCCCCchhHHHHhhhcCCC
Q 037433           11 DHSSSDENEVKELDTSSAK   29 (181)
Q Consensus        11 ~sf~~~s~L~~h~~~h~~~   29 (181)
                      +.|.....|..|+|+||||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            5688889999999999986

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.37  E-value=0.039  Score=26.43  Aligned_cols=22  Identities=5%  Similarity=-0.136  Sum_probs=15.1

Q ss_pred             ccCCCCCCCCCCCchhHHHHHh
Q 037433           60 KAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        60 ~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      |+|+.|.-...+++.|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5677777666777777777664

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.44  E-value=0.19  Score=24.23  Aligned_cols=19  Identities=47%  Similarity=0.871  Sum_probs=15.1

Q ss_pred             CCc--ccccCCChHHHHHhHH
Q 037433           34 CTF--CKRGFTNAQALGGHMN   52 (181)
Q Consensus        34 C~~--C~k~F~~~~~L~~H~~   52 (181)
                      |.+  |++.|++.+.|.-|.+
T Consensus         3 cdf~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           3 CDFPGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             CSSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCchhhhccHHHHHhHHH
Confidence            554  8899999888888865

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.12  E-value=0.17  Score=24.24  Aligned_cols=18  Identities=28%  Similarity=0.707  Sum_probs=13.0

Q ss_pred             ccccCCChHHHHHhHHhh
Q 037433           37 CKRGFTNAQALGGHMNIH   54 (181)
Q Consensus        37 C~k~F~~~~~L~~H~~~H   54 (181)
                      |.|.|...++++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            777777777777777665

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.68  E-value=0.19  Score=23.91  Aligned_cols=23  Identities=22%  Similarity=0.599  Sum_probs=20.9

Q ss_pred             ceeCCcccccCCChHHHHHhHHh
Q 037433           31 SYECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      .|.|+.|+....+++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            37899999999999999999874

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.97  E-value=0.097  Score=25.28  Aligned_cols=27  Identities=7%  Similarity=-0.026  Sum_probs=23.4

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHHhcC
Q 037433           57 DRAKAKQTTGPSFITSNPMLTHEDYMN   83 (181)
Q Consensus        57 ekp~~C~~C~k~F~~~~~L~~H~~~~~   83 (181)
                      +..|.|..|...|.+.-.|+.||-.|.
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeeccc
Confidence            467899999999999999999997654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.51  E-value=0.26  Score=24.68  Aligned_cols=22  Identities=23%  Similarity=0.557  Sum_probs=19.3

Q ss_pred             ceeCCcccccCCChHHHHHhHH
Q 037433           31 SYECTFCKRGFTNAQALGGHMN   52 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~   52 (181)
                      .|.|.-||-.|+..+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4889999999999999999974

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.41  E-value=0.11  Score=30.99  Aligned_cols=23  Identities=26%  Similarity=0.481  Sum_probs=20.4

Q ss_pred             ceeCCcccccCCChHHHHHhHHh
Q 037433           31 SYECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        31 p~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      -|-|..|.|.|.+...|..|++.
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            48899999999999999999763

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.27  E-value=0.21  Score=25.38  Aligned_cols=26  Identities=23%  Similarity=0.598  Sum_probs=20.1

Q ss_pred             CCcceeCCcccccCCChHHHHHhHHh
Q 037433           28 AKRSYECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        28 ~~kp~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      ++..|.|.+|.+.++..+++-+|--+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            45568888888888888888888543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.94  E-value=0.21  Score=29.26  Aligned_cols=38  Identities=16%  Similarity=0.247  Sum_probs=24.0

Q ss_pred             CCCcceeCCcccccCCChHHHHHhHHhhcCCCCccCCCCCC
Q 037433           27 SAKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQTTGP   67 (181)
Q Consensus        27 ~~~kp~~C~~C~k~F~~~~~L~~H~~~H~gekp~~C~~C~k   67 (181)
                      +....|.|+.|++.|+...++.-   +-.-.--|.|..|+-
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCC
T ss_pred             ccCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCC
Confidence            44567888888888877666532   222334577777753

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.92  E-value=0.63  Score=25.36  Aligned_cols=26  Identities=15%  Similarity=0.492  Sum_probs=18.2

Q ss_pred             CCcceeCCcccccCCChHHHHHhHHh
Q 037433           28 AKRSYECTFCKRGFTNAQALGGHMNI   53 (181)
Q Consensus        28 ~~kp~~C~~C~k~F~~~~~L~~H~~~   53 (181)
                      .+.|-.|.+|+-......+|.+|...
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            35567777777777777777777654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=82.79  E-value=0.22  Score=24.93  Aligned_cols=23  Identities=13%  Similarity=0.164  Sum_probs=19.8

Q ss_pred             CCccCCCCCCCCCCCchhHHHHH
Q 037433           58 RAKAKQTTGPSFITSNPMLTHED   80 (181)
Q Consensus        58 kp~~C~~C~k~F~~~~~L~~H~~   80 (181)
                      -.|.|.-||-+|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            35889999999999999988864

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.96  E-value=0.16  Score=25.81  Aligned_cols=31  Identities=6%  Similarity=0.004  Sum_probs=25.9

Q ss_pred             CCCCccCCCCCCCCCCCchhHHHHHhcCCCC
Q 037433           56 KDRAKAKQTTGPSFITSNPMLTHEDYMNPRY   86 (181)
Q Consensus        56 gekp~~C~~C~k~F~~~~~L~~H~~~~~~~~   86 (181)
                      ++..|+|.+|.+.+...+++-+|.-+.+++.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk~n   35 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRN   35 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcccC
Confidence            4567999999999999999999988765553

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.76  E-value=0.11  Score=30.94  Aligned_cols=23  Identities=22%  Similarity=0.119  Sum_probs=20.7

Q ss_pred             CccCCCCCCCCCCCchhHHHHHh
Q 037433           59 AKAKQTTGPSFITSNPMLTHEDY   81 (181)
Q Consensus        59 p~~C~~C~k~F~~~~~L~~H~~~   81 (181)
                      .|.|..|.|.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            47899999999999999999875