Citrus Sinensis ID: 037479
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 492 | 2.2.26 [Sep-21-2011] | |||||||
| Q93ZB9 | 493 | Fatty acyl-CoA reductase | yes | no | 0.993 | 0.991 | 0.617 | 0.0 | |
| Q9XGY7 | 493 | Alcohol-forming fatty acy | N/A | no | 0.995 | 0.993 | 0.589 | 1e-178 | |
| Q9LXN3 | 493 | Probable fatty acyl-CoA r | no | no | 0.991 | 0.989 | 0.551 | 1e-161 | |
| Q39152 | 491 | Fatty acyl-CoA reductase | no | no | 0.985 | 0.987 | 0.548 | 1e-159 | |
| Q0WRB0 | 496 | Probable fatty acyl-CoA r | no | no | 0.995 | 0.987 | 0.535 | 1e-149 | |
| Q1PEI6 | 496 | Fatty acyl-CoA reductase | no | no | 0.989 | 0.981 | 0.531 | 1e-144 | |
| Q08891 | 616 | Fatty acyl-CoA reductase | no | no | 0.981 | 0.784 | 0.390 | 5e-98 | |
| Q9FMQ9 | 409 | Putative fatty acyl-CoA r | no | no | 0.737 | 0.887 | 0.471 | 9e-98 | |
| B9TSP7 | 548 | Fatty acyl-CoA reductase | no | no | 0.941 | 0.844 | 0.345 | 2e-79 | |
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | yes | no | 0.882 | 0.694 | 0.261 | 1e-41 |
| >sp|Q93ZB9|FACR3_ARATH Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/491 (61%), Positives = 397/491 (80%), Gaps = 2/491 (0%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
ME+ SVL++L+NK+ILV GA GFLA IFVEKILRV PNVKKLYLLLRA+ KSAT RF++
Sbjct: 5 MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64
Query: 61 EIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINL 120
EI+ KDLF+VLKEK G +LN L SEKIT+V GDI EDLG++D +L EM +++D ++NL
Sbjct: 65 EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNL 124
Query: 121 AATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKM 180
AATT FDERYDVAL +NT GA +VLNF+K+CAK+ +LVHVSTA+V GE+SG++ E+ ++M
Sbjct: 125 AATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRM 184
Query: 181 GDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240
G+TLNG +GLDI+ E+++V+++L++L+ GA+ E IT MKDLG++RAK+YGWPNTYVFT
Sbjct: 185 GETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFT 244
Query: 241 KVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300
K MGEM + +EN+S+ ++RP+IIT T+KEPFPGW EGIRTIDSLAVGYGKG+LTCFL
Sbjct: 245 KAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLC 304
Query: 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360
D+ + DV+PADMVVN+I+V++ A A + ++ IY VGSSLRNP+ + + AYRYF+
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI--IYHVGSSLRNPMKNSKFPELAYRYFS 362
Query: 361 KKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLN 420
KPW NK+GK VKVG I + M SF+RYMT+RY++ LKGLEL N CK F+ ++ N
Sbjct: 363 IKPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALKGLELVNIILCKLFEKEFQYFN 422
Query: 421 RKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFIN 480
+KINF+ RLV+LY+PYLFF GIFDD NTEKLR + GVE ++FYFDPK +DW+DYF+N
Sbjct: 423 KKINFIFRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLN 482
Query: 481 THIPGIVKYAF 491
TH+ G++KY F
Sbjct: 483 THVIGLLKYVF 493
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C24:0 and C26:0. May be unable to use saturated and monounsaturated C16 and C18 acyl-CoA as substrates. Involved in cuticular wax formation. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2 |
| >sp|Q9XGY7|FAR_SIMCH Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1 | Back alignment and function description |
|---|
Score = 625 bits (1613), Expect = e-178, Method: Compositional matrix adjust.
Identities = 289/490 (58%), Positives = 384/490 (78%)
Query: 2 ELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNE 61
E+GS+LEFL+NK ILVTGATG LAKIFVEK+LR QPNVKKLYLLLRA D ++A +R NE
Sbjct: 3 EMGSILEFLDNKAILVTGATGSLAKIFVEKVLRSQPNVKKLYLLLRATDDETAALRLQNE 62
Query: 62 IIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLA 121
+ GK+LF+VLK+ G + + +SEK+T+VPGDIT EDL +KD NL+EEMW ++DVV+NLA
Sbjct: 63 VFGKELFKVLKQNLGANFYSFVSEKVTVVPGDITGEDLCLKDVNLKEEMWREIDVVVNLA 122
Query: 122 ATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMG 181
AT NF ERYDV+L +NT+GAK+VL+F+KKC KL + VHVSTA+V GE++G++ E + MG
Sbjct: 123 ATINFIERYDVSLLINTYGAKYVLDFAKKCNKLKIFVHVSTAYVSGEKNGLILEKPYYMG 182
Query: 182 DTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241
++LNG GLDI+VE+++VE ++NELQA GA+E++I MKD+GI+RA+ +GWPN YVFTK
Sbjct: 183 ESLNGRLGLDINVEKKLVEAKINELQAAGATEKSIKSTMKDMGIERARHWGWPNVYVFTK 242
Query: 242 VMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301
+GEM + K ++ + I+RPTIIT T+KEPFPGW EG+RTID++ V YGKGRL C L
Sbjct: 243 ALGEMLLMQYKGDIPLTIIRPTIITSTFKEPFPGWVEGVRTIDNVPVYYGKGRLRCMLCG 302
Query: 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361
I+D+IPADMVVNA +VA+VAHA Q Y VGSS NP+ + L + A+RYFTK
Sbjct: 303 PSTIIDLIPADMVVNATIVAMVAHANQRYVEPVTYHVGSSAANPMKLSALPEMAHRYFTK 362
Query: 362 KPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLNR 421
PWIN D PV VG+ VF ++F+ Y+T+ ++LPLK LE+AN FC++F+ KY DL R
Sbjct: 363 NPWINPDRNPVHVGRAMVFSSFSTFHLYLTLNFLLPLKVLEIANTIFCQWFKGKYMDLKR 422
Query: 422 KINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFINT 481
K ++RLV++Y+PYLFF GIFDD NTEKLR+ A+++ VE D+FYFDP+ I+WEDYF+ T
Sbjct: 423 KTRLLLRLVDIYKPYLFFQGIFDDMNTEKLRIAAKESIVEADMFYFDPRAINWEDYFLKT 482
Query: 482 HIPGIVKYAF 491
H PG+V++
Sbjct: 483 HFPGVVEHVL 492
|
NADPH-dependent alcohol-forming fatty acyl-coenzyme A reductase that catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The recombinant enzyme accepts saturated and mono-unsaturated fatty acyl-CoAs of 16 to 22 carbons. Simmondsia chinensis (taxid: 3999) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 4 |
| >sp|Q9LXN3|FACR4_ARATH Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 569 bits (1467), Expect = e-161, Method: Compositional matrix adjust.
Identities = 271/491 (55%), Positives = 358/491 (72%), Gaps = 3/491 (0%)
Query: 4 GSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEII 63
+ ++FL +KTILVTG GFLAK+FVEKILR+QP VKKL+LLLRAAD +SA RFH+E++
Sbjct: 3 SNCIQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVL 62
Query: 64 GKDLFRVLKEKNG-THLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122
KDLFRVLK G +L A I+EK+ +PGDI+ ++LGVK S+L + MWN++D+++N+AA
Sbjct: 63 EKDLFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAA 122
Query: 123 TTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGD 182
TTNFDERYDV L +NTFG +VLNF+KKC K +L+HVSTA+V GE+SG+L+E +F MG+
Sbjct: 123 TTNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGE 182
Query: 183 TLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242
TLNG L I+ E ++++Q+L ELQ + SEE I+ +MKDLG+ RAK++GWPNTYVFTK
Sbjct: 183 TLNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKS 242
Query: 243 MGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302
MGEM + + +EN+ + I+RPT+IT T+ EPFPGW EG+RTIDS+ V YGKGRL CFL D
Sbjct: 243 MGEMLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADP 302
Query: 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362
++D+IP DMV NA+V A HA + +Y VGSS +NP+ + + D A YFTK
Sbjct: 303 NSVLDLIPVDMVANAMVTAAAIHAGKLGS-QTVYHVGSSCKNPITFEQIHDLAASYFTKN 361
Query: 363 PWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLNRK 422
P + +DG + V K T+ MA F YMT+RY LPL+ L L + + +KY D++RK
Sbjct: 362 PLVRRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRK 421
Query: 423 INFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVET-DIFYFDPKCIDWEDYFINT 481
I MRLV+LYRPY+ F GIFDD NTEKLRL ++ E +F FDPK IDWEDY
Sbjct: 422 IKLAMRLVDLYRPYVLFKGIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTI 481
Query: 482 HIPGIVKYAFK 492
HIPG++ Y K
Sbjct: 482 HIPGLITYVLK 492
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q39152|FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 561 bits (1445), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/490 (54%), Positives = 359/490 (73%), Gaps = 5/490 (1%)
Query: 5 SVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIG 64
+ ++FL NKTIL+TGA GFLAK+ VEKILR+QPNVKK+YLLLRA D KSA R +E++
Sbjct: 4 NCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVME 63
Query: 65 KDLFRVLKEKNGT-HLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAAT 123
DLF+VL+ G +LNAL+ EKI VPGDI+ ++LG+KD++L + MW+++D++IN+AAT
Sbjct: 64 IDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAAT 123
Query: 124 TNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDT 183
TNFDERYD+ L +NTFGA +VLNF+KKC K +L+HVSTA++ GE+ G+L E FKMG+T
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGET 183
Query: 184 LNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243
L+G LDI++E +++Q+L ELQ S+E I+ MKD G+ RAK++GWPNTYVFTK M
Sbjct: 184 LSGDRELDINIEHDLMKQKLKELQ--DCSDEEISQTMKDFGMARAKLHGWPNTYVFTKAM 241
Query: 244 GEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303
GEM + +EN+ + I+RPT+IT T EPFPGW EG++T+DS+ V YGKGRL CFL D
Sbjct: 242 GEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSN 301
Query: 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363
+ D+IPADMVVNA+V A AH+ + + IY VGSS +NP+ + L D+ RYF K+P
Sbjct: 302 SVFDLIPADMVVNAMVAAATAHSGD-TGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRP 360
Query: 364 WINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLNRKI 423
I ++G P+ V K T+ MA F YMT+RY LPL+ L L N + Y+DL+RKI
Sbjct: 361 LIGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLSRKI 420
Query: 424 NFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETD-IFYFDPKCIDWEDYFINTH 482
MRLVELY+PYL F GIFDD NTE+LR+ ++N E D F FDPK IDW++Y NTH
Sbjct: 421 KLAMRLVELYQPYLLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITNTH 480
Query: 483 IPGIVKYAFK 492
IPG++ + K
Sbjct: 481 IPGLITHVLK 490
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0WRB0|FACR5_ARATH Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/497 (53%), Positives = 351/497 (70%), Gaps = 7/497 (1%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
MEL V +FL NKTILVTGATGFLAK+FVEKILRVQPNVKKLYLL+RA+D ++AT R
Sbjct: 1 MELNCV-QFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
Query: 61 EIIGKDLFRVLKEKNGTH-LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVIN 119
E+ K+LF+VL++ G LN L+ EK+ VPGDI + LG+ DS+LRE M ++D+V+N
Sbjct: 60 EVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVN 119
Query: 120 LAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFK 179
+AATTNFDERYDV L +NTFGA +VLNF+KKC K+ +L+HVSTA+V GE+ G++ E F
Sbjct: 120 VAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFI 179
Query: 180 MGDTLN-GASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238
M + N LDI++ER++++Q L EL + SEE ITL+MK+LG++RAK++GWPNTYV
Sbjct: 180 MEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYV 239
Query: 239 FTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298
FTK MGEM + KEN+ + I+RPT+IT T EPFPGW EG+RT+DS+ + YGKG L CF
Sbjct: 240 FTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 299 LGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRY 358
L DV + D+IP DMV NA++ A HA S V+ +Y VGSS +NP+ + + + A RY
Sbjct: 300 LVDVNSVCDMIPVDMVANAMITAAAKHAGG-SGVHMVYHVGSSHQNPVTFGEIHEIAVRY 358
Query: 359 FTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYND 418
FTK P +++G + V K+ MA F YMT+RY LPL+ L+L + + KY D
Sbjct: 359 FTKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQLLKLVDIIYPWRNGDKYGD 418
Query: 419 LNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGV---ETDIFYFDPKCIDWE 475
NRKI VMRLVELY PY+ F GIFDD+NT+ L ++ + E +F FDPK I+W
Sbjct: 419 KNRKIELVMRLVELYEPYVLFKGIFDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWG 478
Query: 476 DYFINTHIPGIVKYAFK 492
DY N HI G+V + K
Sbjct: 479 DYLTNIHISGLVTHVLK 495
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q1PEI6|FACR8_ARATH Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 512 bits (1318), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/493 (53%), Positives = 352/493 (71%), Gaps = 6/493 (1%)
Query: 5 SVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIG 64
S + FL+NKTILVTGATGFLAK+FVEKILRVQPNV KLYL++RA+D ++AT R E
Sbjct: 4 SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFE 63
Query: 65 KDLFRVLKEKNGTH-LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAAT 123
KDLF+VL++ G LN L+SEK+ V GDI + LG+KDSNLRE M ++D+V+N+AAT
Sbjct: 64 KDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAAT 123
Query: 124 TNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDT 183
TNFDERYD+ L +NTFGA +VLNF+KKC K +L+HVSTA+V GE+ G+L E F M +
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEI 183
Query: 184 LN-GASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242
N LDI++ER++++Q L EL +G SEE T MK+LG++RAK++GWPNTYVFTK
Sbjct: 184 CNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKS 243
Query: 243 MGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302
MGEM + + KEN+ + I+RPT+IT T EPFPGW EG+RT+DS+ + YGKG L CFL DV
Sbjct: 244 MGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDV 303
Query: 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362
+ D+IPADMV NA++ A HA S V+ +YQVGSS +NP+IY +++ + YFTK
Sbjct: 304 NSVCDMIPADMVANAMIAAAATHAGG-SKVHMVYQVGSSHQNPIIYGEIREILFCYFTKN 362
Query: 363 PWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLNRK 422
+++G + V K+ + +A F YMT+RY LP++ L+L + + +Y + NRK
Sbjct: 363 SLRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNKNRK 422
Query: 423 INFVMRLVELYRPYLFFGGIFDDKNTEKL--RLVARDN-GVETDIFYFDPKCIDWEDYFI 479
I+ VMRLV+LY PY+ F GIFDD+NT+ L + DN E +F FDPK I W+DY I
Sbjct: 423 IDMVMRLVKLYEPYVLFKGIFDDRNTKNLCAKQKEEDNRNSENFMFDFDPKIIKWKDYLI 482
Query: 480 NTHIPGIVKYAFK 492
N HIPG++ + K
Sbjct: 483 NVHIPGLITHVLK 495
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 358 bits (919), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 193/494 (39%), Positives = 299/494 (60%), Gaps = 11/494 (2%)
Query: 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGK 65
++ FL+ K L+TG+TGFLAK+ +EK+LR+ P+V K+YLL++A ++A R NE++
Sbjct: 124 IISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEVLDA 183
Query: 66 DLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTN 125
+LF LKE +G + + K+ V G+I ++G++ ++ EE+ ++DV+IN AA T
Sbjct: 184 ELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAANTT 242
Query: 126 FDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLN 185
F+ERYDVALD+NT G +++ F+KKC KL + + VSTA+V G+ G + E F MGD +
Sbjct: 243 FNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGDCIA 302
Query: 186 GASGLDIDVERQVVEQELN---ELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242
+ L+ + + V++E+ E +G + MKDLG++RA+ YGW +TYVFTK
Sbjct: 303 TENFLEGNRKALDVDREMKLALEAARKGTQNQDEAQKMKDLGLERARSYGWQDTYVFTKA 362
Query: 243 MGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302
MGEM I + ++ V I+RP++I TYK+PFPGW EG R +D + + YGKG+LT FL D
Sbjct: 363 MGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQLTGFLVDP 422
Query: 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVN---NIYQVGSSLRNPLIYTNLQDYAYRYF 359
KG++DV+PADMVVNA + A+ H SD N+YQ+ SS NPL++ +L + Y ++
Sbjct: 423 KGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELLYNHY 482
Query: 360 TKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDL 419
P ++ G P+ V + +F+ + F ++ R GL ++ K +
Sbjct: 483 KTSPCMDSKGDPIMVRLMKLFNSVDDFSDHLW-RDAQERSGLMSGMSSVDSKMMQKLKFI 541
Query: 420 NRK-INFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYF 478
+K + L +Y PY F+GG FD+ NT+ RL+ + E F FD I+W DY
Sbjct: 542 CKKSVEQAKHLATIYEPYTFYGGRFDNSNTQ--RLMENMSEDEKREFGFDVGSINWTDYI 599
Query: 479 INTHIPGIVKYAFK 492
N HIPG+ ++ K
Sbjct: 600 TNVHIPGLRRHVLK 613
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Involved in the synthesis of the lipid component in sporopollenin. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q9FMQ9|FACR7_ARATH Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 357 bits (917), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 173/367 (47%), Positives = 245/367 (66%), Gaps = 4/367 (1%)
Query: 113 KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM 172
+L +++ + + ++RYDVAL +NTFGA +VLNF+KKC K +L+HVST +V GE G
Sbjct: 40 RLYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGH 99
Query: 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232
+ E F MG++LNG + +DI+ ER++ +Q+ + + +G SEE AMKD G+KRA++YG
Sbjct: 100 IVEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYG 159
Query: 233 WPNTYVFTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGK 292
WPNTYVFTK MGEM + H +E M + I+RPTIIT T+ +PFPGW EG++T+DS+ + YGK
Sbjct: 160 WPNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGK 219
Query: 293 GRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQ 352
G L CFL D K + D+IP DMVVNA+ +A+ A S + +Y VGSS +NP+IY +
Sbjct: 220 GILKCFLVDQKTVCDIIPVDMVVNAM-IAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIY 278
Query: 353 DYAYRYFTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYF 412
+ RYF K P + ++G + V K+T +A F Y +RY LP++ L L +
Sbjct: 279 EMMSRYFMKSPLVGRNGMLI-VPKVTRISTLARFRVYTNLRYKLPIQILGLLSVISLSQ- 336
Query: 413 QSKYNDLNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCI 472
+ K+ NRK MRLV+LY+PY+ F GIFDDKN E LR+ +E +F +PKCI
Sbjct: 337 RDKFALHNRKFKMAMRLVKLYKPYVLFKGIFDDKNMETLRIKNEAKDME-KLFGTNPKCI 395
Query: 473 DWEDYFI 479
DWEDYF+
Sbjct: 396 DWEDYFM 402
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|B9TSP7|FACR6_ARATH Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana GN=FAR6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 266/483 (55%), Gaps = 20/483 (4%)
Query: 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGK 65
++ FLE K+ LVTGATGFLAK+ +EK+LR + K++LL+R+ D +SA R ++EII
Sbjct: 77 IVRFLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKRLYDEIISS 136
Query: 66 DLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTN 125
DLF++LK+ +G+ A + K+ V GDI ++LG+K S + + ++DV+I+ T
Sbjct: 137 DLFKLLKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIK-SEIANMISEEIDVIISCGGRTT 195
Query: 126 FDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLN 185
FD+RYD AL +N G +L+F K C KL + +H STA+V G+ G + E+ +G+ N
Sbjct: 196 FDDRYDSALSVNALGPGRLLSFGKGCRKLKLFLHFSTAYVTGKREGTVLETPLCIGE--N 253
Query: 186 GASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245
S L+I E ++ + + + + E I +K+LG +RA+ YGW N+Y FTK +GE
Sbjct: 254 ITSDLNIKSELKLASEAVRKFRGR----EEIK-KLKELGFERAQHYGWENSYTFTKAIGE 308
Query: 246 MFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305
I + N+ V I+RP+II +Y EPFPGW +G R D + + Y KG+++ F D + +
Sbjct: 309 AVIHSKRGNLPVVIIRPSIIESSYNEPFPGWIQGTRMADPIILAYAKGQISDFWADPQSL 368
Query: 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWI 365
+D+IP DMV NA + A+ H + SS NP+ L D ++++ P
Sbjct: 369 MDIIPVDMVANAAIAAMAKHGCGVPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFPL- 427
Query: 366 NKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLNRKINF 425
+ + + + + + F ++ I + ++ RK+N+
Sbjct: 428 --EETVIDLEHMKIHSSLEGFTSALSNTIIKQERVIDNEGGGLS-------TKGKRKLNY 478
Query: 426 VMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFINTHIPG 485
+ L + Y PY FF FD+ NT L+ + E F FD K IDWE Y +N H+PG
Sbjct: 479 FVSLAKTYEPYTFFQARFDNTNTTS--LIQEMSMEEKKTFGFDIKGIDWEHYIVNVHLPG 536
Query: 486 IVK 488
+ K
Sbjct: 537 LKK 539
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. May be involved in the generation of C30 primary alcohol. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 222/497 (44%), Gaps = 63/497 (12%)
Query: 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGK 65
+ +F +++ +TG TGF+ K+ VEK+LR P ++ +YLL+R + + R E++
Sbjct: 119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARL-TELLNA 177
Query: 66 DLFRVLKEKNGTHLNALISEKITLVPGDITREDLGV--KDSNLREEMWNKLDVVINLAAT 123
LF L+++ L+ K+ + GDIT E+LG+ KD NL + + VV + AAT
Sbjct: 178 PLFESLRQEKPKELS-----KVIPISGDITSEELGISEKDQNL---LCRNVSVVFHSAAT 229
Query: 124 TNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE---SGMLYESSFKM 180
FDE+ +++ +N G K ++ + L L+HVSTA+ + S ++Y +
Sbjct: 230 VKFDEKLKLSVTINMLGTKRLVELCHRMLSLDALIHVSTAYCNCDRTDVSEVIYAPPYNP 289
Query: 181 GDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240
D ++ + L D+ Q+ + + KR PNTY FT
Sbjct: 290 DDIISLINWLPEDILDQLTPRLIG---------------------KR------PNTYTFT 322
Query: 241 KVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300
K + E + N+ VAIVRP+I+T + EPF GW + L KG +
Sbjct: 323 KALAEHMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFRTMMC 382
Query: 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360
+ + D++P D+V+N ++ A A + S+ IY + RNP+I++ +A
Sbjct: 383 EKNYVADMVPVDIVINLMIAAAWRTATRKSNNLLIYNCCTGQRNPIIWSEFVKHAMTSVR 442
Query: 361 KKPWINKDGKPVKVGKITVFHDMASF---YRYMTVRYILPLKGLELANAAFCKYFQSKYN 417
K P P G + + M + ++ YIL + F Q+K
Sbjct: 443 KHPLEGCLWYP--TGDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKKPFVVNVQNK-- 498
Query: 418 DLNRKINFVMRLVELYRPYLFFGGIFDDKNTEKL--RLVARDNGVETDIFYFDPKCIDWE 475
+ + VE + F D N L L +D +IF FD + I+W+
Sbjct: 499 --------IAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDR----EIFVFDVRHINWD 546
Query: 476 DYFINTHIPGIVKYAFK 492
Y + ++ G ++ FK
Sbjct: 547 KY-VERYVLGFREFLFK 562
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 492 | ||||||
| 356542728 | 493 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.997 | 0.995 | 0.702 | 0.0 | |
| 356541412 | 523 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.997 | 0.938 | 0.694 | 0.0 | |
| 356550111 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.995 | 1.0 | 0.684 | 0.0 | |
| 225436687 | 490 | PREDICTED: fatty acyl-CoA reductase 3 is | 0.995 | 1.0 | 0.689 | 0.0 | |
| 356543580 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.995 | 1.0 | 0.676 | 0.0 | |
| 388491432 | 492 | unknown [Medicago truncatula] | 0.993 | 0.993 | 0.674 | 0.0 | |
| 357453013 | 492 | Fatty acyl-CoA reductase [Medicago trunc | 0.993 | 0.993 | 0.674 | 0.0 | |
| 388500498 | 492 | unknown [Medicago truncatula] | 0.995 | 0.995 | 0.668 | 0.0 | |
| 356543578 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.995 | 1.0 | 0.670 | 0.0 | |
| 356539286 | 492 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.997 | 0.997 | 0.671 | 0.0 |
| >gi|356542728|ref|XP_003539817.1| PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/494 (70%), Positives = 414/494 (83%), Gaps = 3/494 (0%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
MELGS+L FL++K IL+TGATGFLAK+ +EKILRVQPNVKKLYLLLRAADAKSAT R +N
Sbjct: 1 MELGSILHFLQDKNILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLNN 60
Query: 61 EIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINL 120
EIIGKDLFRVLKEK G + N+ +S+K+TLVPGDI+REDLG++DS LREE++++ DV+INL
Sbjct: 61 EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINL 120
Query: 121 AATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE--ESGMLYESSF 178
AATTNFDERYD++L LNTFG K+V+NF+KKC KL VLVHVSTA+V GE G++ E +
Sbjct: 121 AATTNFDERYDISLGLNTFGVKYVINFAKKCTKLEVLVHVSTAYVCGEGGREGLILEKPY 180
Query: 179 KMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238
+GD+LNG SGLDI+ E +VV +L+ELQ GA+E+ I MKDLGI RAK+YGWPNTYV
Sbjct: 181 HLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYV 240
Query: 239 FTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298
FTK MGEM +E LK N+SV +RPTI+T T+KEPFPGWAEG+RTIDSLAV YGKG+LTCF
Sbjct: 241 FTKAMGEMLVEQLKGNLSVVTIRPTIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCF 300
Query: 299 LGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRY 358
LGD+K IVD IPADMVVNAI+VA+VAHA PSD + IY VGSS+R PL Y NLQ+Y +RY
Sbjct: 301 LGDLKAIVDAIPADMVVNAILVAMVAHANHPSD-DVIYHVGSSVRRPLRYGNLQEYGFRY 359
Query: 359 FTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYND 418
FT KP INKDG+PVKVGK+TV +M SF RYM +RY+L LKGLELAN AFC+YFQ Y +
Sbjct: 360 FTAKPCINKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLN 419
Query: 419 LNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYF 478
LNRKI VMRLV+LY+PYLFF FDD NTEKLR+ AR GVETD+FYFDP+ IDWEDYF
Sbjct: 420 LNRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAARQGGVETDLFYFDPELIDWEDYF 479
Query: 479 INTHIPGIVKYAFK 492
+N H+PG+VKY K
Sbjct: 480 LNIHLPGVVKYILK 493
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356541412|ref|XP_003539171.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/494 (69%), Positives = 412/494 (83%), Gaps = 3/494 (0%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
MELGS+L FL++K+IL+TGATGFLAK+ +EKILRVQPNVKKLYLLLR DAKSAT R HN
Sbjct: 31 MELGSILHFLQDKSILITGATGFLAKVLLEKILRVQPNVKKLYLLLRTEDAKSATHRLHN 90
Query: 61 EIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINL 120
EIIGKDLFRVLKEK G + N+ +S+K+TLVPGDI+REDLG++DS LREE++++ DV+INL
Sbjct: 91 EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINL 150
Query: 121 AATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE--ESGMLYESSF 178
AATTNFDERYD++L LNTFG K+V+NF+KKC KL VLVHVSTA+V GE G++ E +
Sbjct: 151 AATTNFDERYDISLGLNTFGVKYVINFAKKCTKLKVLVHVSTAYVCGEGGREGLILEKPY 210
Query: 179 KMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238
+GD+LNG SGLDI+ E +VV +L+ELQ GA+E+ I MKDLGI RAK+YGWPNTYV
Sbjct: 211 HLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYV 270
Query: 239 FTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298
FTK MGEM +E LK N+SV I+RP+I+T T KEPFPGWAEG+RTIDSLAV YGKG+LTCF
Sbjct: 271 FTKAMGEMLVEQLKGNLSVVIIRPSIVTSTLKEPFPGWAEGVRTIDSLAVAYGKGKLTCF 330
Query: 299 LGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRY 358
LGD+K IVD IPADMVVNAI+VA+VAHA +PSD + IY +GSS+R PL Y LQ+Y +RY
Sbjct: 331 LGDLKAIVDAIPADMVVNAILVAMVAHANRPSD-DVIYHIGSSVRRPLRYGKLQEYGFRY 389
Query: 359 FTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYND 418
FT KP I+KDG+PVKVGK+TV +M SF RYM +RY+L LKGLELAN AFC+YFQ Y D
Sbjct: 390 FTAKPCISKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLD 449
Query: 419 LNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYF 478
LNRKI VMRLV+LY+PYLFF FDD NTEKLR+ R GVETD+FYFDP+ IDWEDYF
Sbjct: 450 LNRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAGRQGGVETDLFYFDPELIDWEDYF 509
Query: 479 INTHIPGIVKYAFK 492
+N H+PG+VKY K
Sbjct: 510 LNIHLPGMVKYILK 523
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550111|ref|XP_003543433.1| PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/492 (68%), Positives = 409/492 (83%), Gaps = 2/492 (0%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
ME+GSVL FLE+KTIL+ GATGFLAKIF+EKILRVQPNVKKL+LLLRA+DAKSA R N
Sbjct: 1 MEVGSVLNFLEDKTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQN 60
Query: 61 EIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINL 120
EII KDLF VLKEK G + + ISEK+TLVPGDI+ EDLG+KDS LREE+ N+ DV++NL
Sbjct: 61 EIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLKDSILREEICNQTDVIVNL 120
Query: 121 AATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKM 180
AATTNFDERYD+AL LN FG KHV+NF+K+C KL V++HVSTA+V GE G++ E +
Sbjct: 121 AATTNFDERYDIALGLNIFGVKHVMNFAKQCTKLKVVLHVSTAYVCGERGGLILEEPYNF 180
Query: 181 GDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240
GD+LNG SGLDID ER +V +L+EL+ +GA+E I +AMK+LGI RAK+YGWPNTYVFT
Sbjct: 181 GDSLNGVSGLDIDAERTIVCDKLDELREQGATEREIKIAMKNLGISRAKVYGWPNTYVFT 240
Query: 241 KVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300
K +GEM +E LK +SV I+RPTI+T T +EPFPGW EG+RTIDSLAV YGKG+LTCFLG
Sbjct: 241 KAVGEMLVEQLKGRLSVVIMRPTIVTSTLREPFPGWVEGVRTIDSLAVTYGKGKLTCFLG 300
Query: 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360
++ G+VD +PADMVVNA++VA+VAHA QPSD+ IY VGSSLRNPL Y NLQDY +YFT
Sbjct: 301 NINGVVDAVPADMVVNAMLVAMVAHANQPSDI--IYHVGSSLRNPLTYLNLQDYGLKYFT 358
Query: 361 KKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLN 420
KPWINKDG PVKVG++TV DM SF RYM +RY+LPLKGLELAN A C+YF+ Y +L+
Sbjct: 359 AKPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLKGLELANTALCQYFRGTYLELH 418
Query: 421 RKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFIN 480
RKI VMR+VELYRPY+FF G+FDD NTEKLR+ A+ +G ETD+FYFD K ++WEDYF+
Sbjct: 419 RKIQVVMRMVELYRPYMFFNGVFDDINTEKLRIAAKQSGTETDLFYFDTKEVNWEDYFMK 478
Query: 481 THIPGIVKYAFK 492
TH+PGIVK+ FK
Sbjct: 479 THLPGIVKHVFK 490
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436687|ref|XP_002263127.1| PREDICTED: fatty acyl-CoA reductase 3 isoform 1 [Vitis vinifera] gi|296084944|emb|CBI28353.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/492 (68%), Positives = 419/492 (85%), Gaps = 2/492 (0%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
MELGS++EFLENK+ILVTGATGFLAKIFVE+ILR QPNVKKL+LLLRA D KSAT R HN
Sbjct: 1 MELGSIVEFLENKSILVTGATGFLAKIFVERILRTQPNVKKLFLLLRAGDTKSATQRLHN 60
Query: 61 EIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINL 120
E+IGK+LF VL+EK + N+ +S+K+T VPGDI+ +DLGV DSNLREEMW ++D+V+NL
Sbjct: 61 EVIGKELFWVLREKWASDFNSFVSKKLTPVPGDISCDDLGVTDSNLREEMWREVDIVVNL 120
Query: 121 AATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKM 180
AATTNFDERYDVAL +N GA+HVL+F+KKC K+ +L+HVSTA+V GE+SG++ E F+M
Sbjct: 121 AATTNFDERYDVALGINALGARHVLDFAKKCVKIKMLLHVSTAYVAGEQSGLILEQPFQM 180
Query: 181 GDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240
G+TLNG GLDI+ E++++E+ L+ELQ+EGA+ EA+TLAMKD GI+RAK++GWPNTYVFT
Sbjct: 181 GETLNGTFGLDIEEEKKLMEERLDELQSEGATREAVTLAMKDFGIQRAKMHGWPNTYVFT 240
Query: 241 KVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300
K MGEM + HLKEN+ +AI+RPTI++ TYKEPFPGW EGIRTIDS AVGYGKGRLT FLG
Sbjct: 241 KAMGEMLLGHLKENLPLAILRPTIVSSTYKEPFPGWVEGIRTIDSFAVGYGKGRLTFFLG 300
Query: 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360
D++ IVDVIPADMVVN+++VA+ AHA QP +V IYQVGSS++NP+ Y+NLQD+ RYFT
Sbjct: 301 DIEAIVDVIPADMVVNSMIVAMAAHANQPCEV--IYQVGSSVKNPVRYSNLQDFGLRYFT 358
Query: 361 KKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLN 420
K PWINKDGK VKVGK+TV M SF+RYM +RY+L LKGL+ N AFC+YF+ Y DLN
Sbjct: 359 KNPWINKDGKAVKVGKVTVLSTMDSFHRYMALRYLLLLKGLQFVNTAFCQYFRGTYTDLN 418
Query: 421 RKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFIN 480
R+I F++RL+ELY+PYLFF G+FDD NTEKLR+ +G E D+FYFDPKCIDWEDYF+N
Sbjct: 419 RRIKFLLRLIELYKPYLFFKGVFDDMNTEKLRMAVTASGAEADLFYFDPKCIDWEDYFMN 478
Query: 481 THIPGIVKYAFK 492
HIPG VKY FK
Sbjct: 479 IHIPGAVKYVFK 490
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356543580|ref|XP_003540238.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/492 (67%), Positives = 410/492 (83%), Gaps = 2/492 (0%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
ME+GSVL FL+++TIL+ GATGFLAKIF+EKILRVQPNVKKL+LLLRA+DAKSA R N
Sbjct: 1 MEVGSVLNFLQDRTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQN 60
Query: 61 EIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINL 120
EII KDLF VLKEK G + + ISEK+TLVPGDI+ EDLG+ DS LREE+ N+ DV++NL
Sbjct: 61 EIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLTDSILREEICNQTDVIVNL 120
Query: 121 AATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKM 180
AATT FDERYD+AL LN FG KHV+ F+K+CAKL +L+HVSTA+V GE G++ E +
Sbjct: 121 AATTKFDERYDLALGLNIFGVKHVMKFAKQCAKLKILLHVSTAYVCGERGGLILEDPYHF 180
Query: 181 GDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240
GD+LNG SGLDI+ ER +V +L+EL+ +GA+E I +AMK+LGI RAK+YGWPNTYVFT
Sbjct: 181 GDSLNGVSGLDIEAERTIVCDKLDELREQGATEREIEIAMKNLGISRAKVYGWPNTYVFT 240
Query: 241 KVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300
K +GEM +E LK ++SV I+RPTI+T T +EPFPGWAEG+RTIDSLAV YGKG+L CFLG
Sbjct: 241 KAVGEMLVEQLKGSLSVVIMRPTIVTSTLREPFPGWAEGVRTIDSLAVTYGKGKLKCFLG 300
Query: 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360
++ G+VDV+PADMVVNA++VA+VAHAKQPSD+ +Y VGSSLRNPL Y NLQDY +YFT
Sbjct: 301 NINGVVDVVPADMVVNAMLVAMVAHAKQPSDI--VYHVGSSLRNPLTYLNLQDYGLKYFT 358
Query: 361 KKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLN 420
KPWINKDG PVKVG++TV DM SF RYM +RY+LPLKGLELAN A C+YF+ Y +L+
Sbjct: 359 AKPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLKGLELANTALCQYFRGTYLELH 418
Query: 421 RKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFIN 480
RKI VMR+VELYRPY+FF G+FDD NTEKLR+ A+ +G ETD+FYFD K ++W+DYF+
Sbjct: 419 RKIQVVMRMVELYRPYMFFDGVFDDMNTEKLRMAAKQSGTETDLFYFDTKEVNWDDYFMK 478
Query: 481 THIPGIVKYAFK 492
TH+PGIVKY FK
Sbjct: 479 THLPGIVKYIFK 490
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388491432|gb|AFK33782.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/491 (67%), Positives = 407/491 (82%), Gaps = 2/491 (0%)
Query: 2 ELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNE 61
E+GS+L FLE KTILV GATGFLAKIF+EK+LRVQPNVKKL+LLLRA+D KSA R NE
Sbjct: 4 EVGSILNFLEGKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNE 63
Query: 62 IIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLA 121
I+ KDLF +L EK GT+ + ISEK+T+VPGDIT EDLG+KDS LRE++ ++ DV+INLA
Sbjct: 64 ILAKDLFNLLNEKMGTNFKSFISEKLTVVPGDITFEDLGLKDSILREDISSQTDVIINLA 123
Query: 122 ATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMG 181
ATTNFDERYD+ALDLNTFG KH+++F+K+C +L VLVHVSTA+V GE+SG++ ES + +G
Sbjct: 124 ATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLG 183
Query: 182 DTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241
D+LNG +GLDI+ E+++V ++L ELQ +GA+E I +AMKDLGI RA +YGWPNTYVFTK
Sbjct: 184 DSLNGVAGLDINAEKKLVTEKLGELQEKGATEHEIKVAMKDLGITRANVYGWPNTYVFTK 243
Query: 242 VMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301
+GEM +E LK N+SV I+RP I+TGT +EPFPGW EG+RTID LAV YGKG+LTCFLGD
Sbjct: 244 ALGEMLVEKLKGNLSVVILRPAIVTGTLREPFPGWVEGLRTIDCLAVVYGKGKLTCFLGD 303
Query: 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361
+ G+VD IPADMVVNA++VA+VAHA QP D +Y VGSS+RNPL Y + DY +YF
Sbjct: 304 INGVVDAIPADMVVNAMLVAMVAHANQPRD--GVYHVGSSVRNPLRYQSFHDYGLKYFKA 361
Query: 362 KPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLNR 421
KPWINKDG VKVGK+T+ +MASF RY+ +RY+LPLKGL+L N A C+YFQ Y +LNR
Sbjct: 362 KPWINKDGTVVKVGKMTILTNMASFQRYIFIRYLLPLKGLKLVNTALCQYFQGTYLELNR 421
Query: 422 KINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFINT 481
KI VMRLVELYRPYLFF GIFDD NTEKLR+ AR +G E D+FYFDPK +DWEDYF+NT
Sbjct: 422 KIQVVMRLVELYRPYLFFKGIFDDLNTEKLRMSARQSGTEIDLFYFDPKEMDWEDYFMNT 481
Query: 482 HIPGIVKYAFK 492
H+PG+VKY FK
Sbjct: 482 HLPGLVKYIFK 492
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357453013|ref|XP_003596783.1| Fatty acyl-CoA reductase [Medicago truncatula] gi|355485831|gb|AES67034.1| Fatty acyl-CoA reductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/491 (67%), Positives = 407/491 (82%), Gaps = 2/491 (0%)
Query: 2 ELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNE 61
E+GS+L FLE KTILV GATGFLAKIF+EK+LRVQPNVKKL+LLLRA+D KSA R NE
Sbjct: 4 EVGSILNFLEGKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNE 63
Query: 62 IIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLA 121
I+ KDLF +L EK GT+ + ISEK+T+VPGDIT EDLG+KDS LRE++ ++ DV+INLA
Sbjct: 64 ILAKDLFNLLNEKMGTNFKSFISEKLTVVPGDITFEDLGLKDSILREDISSQTDVIINLA 123
Query: 122 ATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMG 181
ATTNFDERYD+ALDLNTFG KH+++F+K+C +L VLVHVSTA+V GE+SG++ ES + +G
Sbjct: 124 ATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLG 183
Query: 182 DTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241
D+LNG +GLDI+ E+++V ++L ELQ +GA+E I +AMKDLGI RA +YGWPNTYVFTK
Sbjct: 184 DSLNGVAGLDINAEKKLVTEKLGELQEKGATEHEIKVAMKDLGITRANVYGWPNTYVFTK 243
Query: 242 VMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301
+GEM +E LK N+SV I+RP I+T T +EPFPGW EG+RTIDSLAV YGKG+LTCFLGD
Sbjct: 244 ALGEMLVEKLKGNLSVVILRPAIVTSTLREPFPGWVEGLRTIDSLAVVYGKGKLTCFLGD 303
Query: 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361
+ G+VD IPADMVVNA++VA+VAHA QP D +Y VGSS+RNPL Y + DY +YF
Sbjct: 304 INGVVDAIPADMVVNAMLVAMVAHANQPRD--GVYHVGSSVRNPLRYQSFHDYGLKYFKA 361
Query: 362 KPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLNR 421
KPWINKDG VKVGK+T+ +MASF RY+ +RY+LPLKGL+L N A C+YFQ Y +LNR
Sbjct: 362 KPWINKDGTVVKVGKMTILTNMASFQRYIFIRYLLPLKGLKLVNTALCQYFQGTYLELNR 421
Query: 422 KINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFINT 481
KI VMRLVELYRPYLFF GIFDD NTEKLR+ AR +G E D+FYFDPK +DWEDYF+NT
Sbjct: 422 KIQVVMRLVELYRPYLFFKGIFDDLNTEKLRMSARQSGTEIDLFYFDPKEMDWEDYFMNT 481
Query: 482 HIPGIVKYAFK 492
H+PG+VKY FK
Sbjct: 482 HLPGLVKYIFK 492
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500498|gb|AFK38315.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/491 (66%), Positives = 409/491 (83%), Gaps = 1/491 (0%)
Query: 2 ELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNE 61
+ GS+ FLE+K +LV GA GFLAKIFVEKILRVQPNVKKLYLLLRA DA+SAT R HNE
Sbjct: 3 QFGSIAHFLEDKNVLVLGAAGFLAKIFVEKILRVQPNVKKLYLLLRATDAESATRRMHNE 62
Query: 62 IIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLA 121
I+ KDLF++LKE +G N+ ISEK+T+VPGDI++E+ +KDSNL +E++NK DV++NLA
Sbjct: 63 ILRKDLFKLLKENHGAKFNSFISEKVTMVPGDISQENFNLKDSNLLQELYNKTDVIVNLA 122
Query: 122 ATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMG 181
ATTNFDERYDVAL LNTFGAKHVLNF+K C L VLVHVSTA+V GE G++ E +++G
Sbjct: 123 ATTNFDERYDVALGLNTFGAKHVLNFAKNCINLRVLVHVSTAYVCGERGGLIVEDPYQLG 182
Query: 182 DTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241
+LNG GLDID E++VVE++LN LQ EGA+E+ +AMKDLG++RAK+YGWPNTYVFTK
Sbjct: 183 VSLNGVQGLDIDEEKRVVEEKLNMLQQEGATEKDTRIAMKDLGMERAKLYGWPNTYVFTK 242
Query: 242 VMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301
MGEM + +KE +S+ IVRPTIIT TYKEPFPGW EG+RTIDSL V YGKG+LTCFL D
Sbjct: 243 AMGEMLVGTMKEKLSIVIVRPTIITSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLAD 302
Query: 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361
++ + DVIPADMVVNA++VA+V+HA QP D ++IY VGSS+ NP+ Y +L+DY +RYFT
Sbjct: 303 LEAVFDVIPADMVVNAMLVAMVSHANQPCD-DSIYHVGSSVGNPVRYESLRDYCFRYFTA 361
Query: 362 KPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLNR 421
KP +K+GK +KVGK+TV +M SF RYM +RY+LPLKGLEL NAAFC+YFQS D++R
Sbjct: 362 KPCFDKEGKAIKVGKVTVLENMNSFQRYMYIRYLLPLKGLELVNAAFCRYFQSTCFDISR 421
Query: 422 KINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFINT 481
K++ VMRLVELYRPY+FF G+FD+ N EKL++ AR +GVE D+FYFDPK I+WEDYF+N
Sbjct: 422 KVHTVMRLVELYRPYVFFNGVFDNMNAEKLQIAARQSGVEMDLFYFDPKMINWEDYFMNI 481
Query: 482 HIPGIVKYAFK 492
HIPGIVKY+FK
Sbjct: 482 HIPGIVKYSFK 492
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356543578|ref|XP_003540237.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/492 (67%), Positives = 402/492 (81%), Gaps = 2/492 (0%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
MELGS++ FL++KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA D +SAT R H
Sbjct: 1 MELGSIMHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRARDTESATQRLHT 60
Query: 61 EIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINL 120
EIIGKDLFR+LKEK GT N+ +SEK+ +VPGDI++EDL ++D L EE++N+ DV++NL
Sbjct: 61 EIIGKDLFRLLKEKLGTRFNSFVSEKLAVVPGDISQEDLNLEDPILGEEIFNQTDVIVNL 120
Query: 121 AATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKM 180
AATTNFDERYD+AL +NT G HVL+F+KKC KL VL+HVSTA+V GE G++ E+
Sbjct: 121 AATTNFDERYDIALSINTLGVLHVLSFAKKCVKLKVLIHVSTAYVCGEREGLILEAPHHF 180
Query: 181 GDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240
G +LNG G DID+E++ VE +LN+L+ EGA E I LAMKDLG +RA +YGWPNTYVFT
Sbjct: 181 GVSLNGVPGPDIDMEKKKVEDKLNQLREEGAIEHDIELAMKDLGTQRATMYGWPNTYVFT 240
Query: 241 KVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300
K MGEM + K NM+V IVRPT++T TYKEPFPGW EG+RTIDS+ V YGKG+L CFL
Sbjct: 241 KAMGEMLVGTTKGNMNVVIVRPTMVTSTYKEPFPGWIEGLRTIDSIVVAYGKGKLVCFLA 300
Query: 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360
+++ + DVIPADMVVNA++VA+VAHA QPSD+ IY VGSS+ NP++Y NL+DY+ RYFT
Sbjct: 301 NLEAVFDVIPADMVVNAMLVAMVAHANQPSDI--IYHVGSSVVNPVMYLNLRDYSVRYFT 358
Query: 361 KKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLN 420
+KPWIN+DGKPVKVGK T+ +M SF +YM +RY+LPLKGLEL NAA C+YFQ Y D N
Sbjct: 359 EKPWINRDGKPVKVGKFTILRNMDSFRKYMYIRYLLPLKGLELVNAASCQYFQKMYLDFN 418
Query: 421 RKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFIN 480
RKI V+RLVELY+PYLFF G+FD+ NTEKL AR GVET++FYFD K IDWEDYFIN
Sbjct: 419 RKIRTVLRLVELYKPYLFFNGVFDNTNTEKLLSSARQGGVETELFYFDTKMIDWEDYFIN 478
Query: 481 THIPGIVKYAFK 492
H PGI+KYAFK
Sbjct: 479 IHFPGIIKYAFK 490
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356539286|ref|XP_003538130.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/493 (67%), Positives = 398/493 (80%), Gaps = 2/493 (0%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
MELGS+ +FL+NK ILV GATGFLAKIFVEK+LRVQPNVKKLYLLLRA DA+SA+ R HN
Sbjct: 1 MELGSITDFLQNKNILVIGATGFLAKIFVEKVLRVQPNVKKLYLLLRATDAESASQRLHN 60
Query: 61 EIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINL 120
EI+ KDLFR+LKE G NA +SEK+TLVPGDI++EDL +KD LREE++N++ ++N
Sbjct: 61 EIMRKDLFRLLKENVGAKFNAFVSEKLTLVPGDISQEDLNLKDPILREEIYNQIHCIVNF 120
Query: 121 AATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKM 180
AATTNFDERYDVAL +NTFG KHVLNF+K C KL VLVHVSTA+V GE G++ E ++
Sbjct: 121 AATTNFDERYDVALGINTFGVKHVLNFAKSCIKLKVLVHVSTAYVCGERGGLIVEDPCQL 180
Query: 181 GDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240
G +LNG GLDI +E++VVE ++N+L EGA+EE + +AMKDLG+KRA +YGWPNTYVFT
Sbjct: 181 GVSLNGVPGLDIGMEKRVVEDKMNQLHEEGATEEDVKMAMKDLGMKRATLYGWPNTYVFT 240
Query: 241 KVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300
K MGEM +E LK+NMSV IVRPT+IT TYKEPFPGW EG+RTIDS+ V YGKG+L CFL
Sbjct: 241 KAMGEMLVETLKKNMSVIIVRPTMITSTYKEPFPGWVEGVRTIDSVIVAYGKGKLPCFLL 300
Query: 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360
D+ I DVIPADMVVNAI+ +VAHA QP D N IYQVGSS+ NP+ Y NL+DY YRYF
Sbjct: 301 DINAIFDVIPADMVVNAIITTLVAHANQPCD-NIIYQVGSSIANPIRYHNLKDYIYRYFK 359
Query: 361 KKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLN 420
KPW+NK+G PV VGK+TV M SF RYM +RY+LPLKGLELAN AFC+YFQ D+
Sbjct: 360 AKPWVNKEGNPVMVGKVTVLDTMTSFQRYMFIRYLLPLKGLELANVAFCQYFQGMCLDIR 419
Query: 421 RKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDI-FYFDPKCIDWEDYFI 479
RKI+ VM+LV+LY+PY+FF G+FD+ NTEKL+ R VE + FYFDPK IDWEDYF+
Sbjct: 420 RKIHIVMQLVDLYKPYVFFKGVFDNMNTEKLQTAVRQGEVEMEYSFYFDPKMIDWEDYFM 479
Query: 480 NTHIPGIVKYAFK 492
N HIPGIVKY FK
Sbjct: 480 NIHIPGIVKYVFK 492
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 492 | ||||||
| TAIR|locus:2134278 | 493 | CER4 "ECERIFERUM 4" [Arabidops | 0.993 | 0.991 | 0.596 | 1.3e-162 | |
| TAIR|locus:2076028 | 493 | FAR4 "fatty acid reductase 4" | 0.985 | 0.983 | 0.536 | 3.4e-141 | |
| TAIR|locus:2171107 | 491 | FAR1 "fatty acid reductase 1" | 0.991 | 0.993 | 0.528 | 2.2e-137 | |
| TAIR|locus:2076023 | 496 | FAR5 "fatty acid reductase 5" | 0.995 | 0.987 | 0.519 | 3.1e-131 | |
| TAIR|locus:2076038 | 496 | FAR8 "fatty acid reductase 8" | 0.995 | 0.987 | 0.513 | 3.9e-131 | |
| TAIR|locus:2176407 | 409 | FAR7 "fatty acid reductase 7" | 0.737 | 0.887 | 0.449 | 2.2e-103 | |
| TAIR|locus:2088664 | 616 | MS2 "MALE STERILITY 2" [Arabid | 0.985 | 0.787 | 0.376 | 2.8e-89 | |
| DICTYBASE|DDB_G0289081 | 1279 | DDB_G0289081 "phospholipid/gly | 0.329 | 0.126 | 0.339 | 7.8e-39 | |
| FB|FBgn0039620 | 517 | CG1443 [Drosophila melanogaste | 0.300 | 0.286 | 0.346 | 8.6e-35 | |
| UNIPROTKB|F1SGA0 | 515 | FAR2 "Uncharacterized protein" | 0.315 | 0.300 | 0.296 | 4.8e-34 |
| TAIR|locus:2134278 CER4 "ECERIFERUM 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1583 (562.3 bits), Expect = 1.3e-162, P = 1.3e-162
Identities = 293/491 (59%), Positives = 383/491 (78%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
ME+ SVL++L+NK+ILV GA GFLA IFVEKILRV PNVKKLYLLLRA+ KSAT RF++
Sbjct: 5 MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64
Query: 61 EIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINL 120
EI+ KDLF+VLKEK G +LN L SEKIT+V GDI EDLG++D +L EM +++D ++NL
Sbjct: 65 EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNL 124
Query: 121 AATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKM 180
AATT FDERYDVAL +NT GA +VLNF+K+CAK+ +LVHVSTA+V GE+SG++ E+ ++M
Sbjct: 125 AATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRM 184
Query: 181 GDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240
G+TLNG +GLDI+ E+++V+++L++L+ GA+ E IT MKDLG++RAK+YGWPNTYVFT
Sbjct: 185 GETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFT 244
Query: 241 KVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300
K MGEM + +EN+S+ ++RP+IIT T+KEPFPGW EGIRTIDSLAVGYGKG+LTCFL
Sbjct: 245 KAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLC 304
Query: 301 DVKGIVDVIPXXXXXXXXXXXXXXXXKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360
D+ + DV+P + ++ IY VGSSLRNP+ + + AYRYF+
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI--IYHVGSSLRNPMKNSKFPELAYRYFS 362
Query: 361 KKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLN 420
KPW NK+GK VKVG I + M SF+RYMT+RY++ LKGLEL N CK F+ ++ N
Sbjct: 363 IKPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALKGLELVNIILCKLFEKEFQYFN 422
Query: 421 RKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFIN 480
+KINF+ RLV+LY+PYLFF GIFDD NTEKLR + GVE ++FYFDPK +DW+DYF+N
Sbjct: 423 KKINFIFRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLN 482
Query: 481 THIPGIVKYAF 491
TH+ G++KY F
Sbjct: 483 THVIGLLKYVF 493
|
|
| TAIR|locus:2076028 FAR4 "fatty acid reductase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1381 (491.2 bits), Expect = 3.4e-141, P = 3.4e-141
Identities = 262/488 (53%), Positives = 347/488 (71%)
Query: 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKD 66
++FL +KTILVTG GFLAK+FVEKILR+QP VKKL+LLLRAAD +SA RFH+E++ KD
Sbjct: 6 IQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKD 65
Query: 67 LFRVLKEKNGT-HLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTN 125
LFRVLK G +L A I+EK+ +PGDI+ ++LGVK S+L + MWN++D+++N+AATTN
Sbjct: 66 LFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAATTN 125
Query: 126 FDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLN 185
FDERYDV L +NTFG +VLNF+KKC K +L+HVSTA+V GE+SG+L+E +F MG+TLN
Sbjct: 126 FDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGETLN 185
Query: 186 GASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245
G L I+ E ++++Q+L ELQ + SEE I+ +MKDLG+ RAK++GWPNTYVFTK MGE
Sbjct: 186 GHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSMGE 245
Query: 246 MFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305
M + + +EN+ + I+RPT+IT T+ EPFPGW EG+RTIDS+ V YGKGRL CFL D +
Sbjct: 246 MLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPNSV 305
Query: 306 VDVIPXXXXXXXXXXXXXXXXKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWI 365
+D+IP + +Y VGSS +NP+ + + D A YFTK P +
Sbjct: 306 LDLIPVDMVANAMVTAAAIHAGKLGS-QTVYHVGSSCKNPITFEQIHDLAASYFTKNPLV 364
Query: 366 NKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLNRKINF 425
+DG + V K T+ MA F YMT+RY LPL+ L L + + +KY D++RKI
Sbjct: 365 RRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRKIKL 424
Query: 426 VMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVET-DIFYFDPKCIDWEDYFINTHIP 484
MRLV+LYRPY+ F GIFDD NTEKLRL ++ E +F FDPK IDWEDY HIP
Sbjct: 425 AMRLVDLYRPYVLFKGIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHIP 484
Query: 485 GIVKYAFK 492
G++ Y K
Sbjct: 485 GLITYVLK 492
|
|
| TAIR|locus:2171107 FAR1 "fatty acid reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1345 (478.5 bits), Expect = 2.2e-137, P = 2.2e-137
Identities = 261/494 (52%), Positives = 347/494 (70%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
ME V +FL NKTIL+TGA GFLAK+ VEKILR+QPNVKK+YLLLRA D KSA R +
Sbjct: 1 MESNCV-QFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRS 59
Query: 61 EIIGKDLFRVLKEKNGT-HLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVIN 119
E++ DLF+VL+ G +LNAL+ EKI VPGDI+ ++LG+KD++L + MW+++D++IN
Sbjct: 60 EVMEIDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIIN 119
Query: 120 LAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFK 179
+AATTNFDERYD+ L +NTFGA +VLNF+KKC K +L+HVSTA++ GE+ G+L E FK
Sbjct: 120 IAATTNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFK 179
Query: 180 MGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239
MG+TL+G LDI++E +++Q+L ELQ S+E I+ MKD G+ RAK++GWPNTYVF
Sbjct: 180 MGETLSGDRELDINIEHDLMKQKLKELQ--DCSDEEISQTMKDFGMARAKLHGWPNTYVF 237
Query: 240 TKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFL 299
TK MGEM + +EN+ + I+RPT+IT T EPFPGW EG++T+DS+ V YGKGRL CFL
Sbjct: 238 TKAMGEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFL 297
Query: 300 GDVKGIVDVIPXXXXXXXXXXXXXXXXKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYF 359
D + D+IP + + IY VGSS +NP+ + L D+ RYF
Sbjct: 298 ADSNSVFDLIPADMVVNAMVAAATAHSGD-TGIQAIYHVGSSCKNPVTFGQLHDFTARYF 356
Query: 360 TKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDL 419
K+P I ++G P+ V K T+ MA F YMT+RY LPL+ L L N + Y+DL
Sbjct: 357 AKRPLIGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDL 416
Query: 420 NRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETD-IFYFDPKCIDWEDYF 478
+RKI MRLVELY+PYL F GIFDD NTE+LR+ ++N E D F FDPK IDW++Y
Sbjct: 417 SRKIKLAMRLVELYQPYLLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYI 476
Query: 479 INTHIPGIVKYAFK 492
NTHIPG++ + K
Sbjct: 477 TNTHIPGLITHVLK 490
|
|
| TAIR|locus:2076023 FAR5 "fatty acid reductase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 258/497 (51%), Positives = 343/497 (69%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
MEL V +FL NKTILVTGATGFLAK+FVEKILRVQPNVKKLYLL+RA+D ++AT R
Sbjct: 1 MELNCV-QFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
Query: 61 EIIGKDLFRVLKEKNGTH-LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVIN 119
E+ K+LF+VL++ G LN L+ EK+ VPGDI + LG+ DS+LRE M ++D+V+N
Sbjct: 60 EVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVN 119
Query: 120 LAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFK 179
+AATTNFDERYDV L +NTFGA +VLNF+KKC K+ +L+HVSTA+V GE+ G++ E F
Sbjct: 120 VAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFI 179
Query: 180 MGDTLN-GASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238
M + N LDI++ER++++Q L EL + SEE ITL+MK+LG++RAK++GWPNTYV
Sbjct: 180 MEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYV 239
Query: 239 FTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298
FTK MGEM + KEN+ + I+RPT+IT T EPFPGW EG+RT+DS+ + YGKG L CF
Sbjct: 240 FTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 299 LGDVKGIVDVIPXXXXXXXXXXXXXXXXKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRY 358
L DV + D+IP S V+ +Y VGSS +NP+ + + + A RY
Sbjct: 300 LVDVNSVCDMIPVDMVANAMITAAAKHAGG-SGVHMVYHVGSSHQNPVTFGEIHEIAVRY 358
Query: 359 FTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYND 418
FTK P +++G + V K+ MA F YMT+RY LPL+ L+L + + KY D
Sbjct: 359 FTKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQLLKLVDIIYPWRNGDKYGD 418
Query: 419 LNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVE-TD--IFYFDPKCIDWE 475
NRKI VMRLVELY PY+ F GIFDD+NT+ L ++ ++ T+ +F FDPK I+W
Sbjct: 419 KNRKIELVMRLVELYEPYVLFKGIFDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWG 478
Query: 476 DYFINTHIPGIVKYAFK 492
DY N HI G+V + K
Sbjct: 479 DYLTNIHISGLVTHVLK 495
|
|
| TAIR|locus:2076038 FAR8 "fatty acid reductase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
Identities = 255/497 (51%), Positives = 343/497 (69%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN 60
ME S + FL+NKTILVTGATGFLAK+FVEKILRVQPNV KLYL++RA+D ++AT R
Sbjct: 1 MEF-SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRT 59
Query: 61 EIIGKDLFRVLKEKNGTH-LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVIN 119
E KDLF+VL++ G LN L+SEK+ V GDI + LG+KDSNLRE M ++D+V+N
Sbjct: 60 EAFEKDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVN 119
Query: 120 LAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFK 179
+AATTNFDERYD+ L +NTFGA +VLNF+KKC K +L+HVSTA+V GE+ G+L E F
Sbjct: 120 VAATTNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFV 179
Query: 180 MGDTLN-GASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238
M + N LDI++ER++++Q L EL +G SEE T MK+LG++RAK++GWPNTYV
Sbjct: 180 MEEICNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYV 239
Query: 239 FTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298
FTK MGEM + + KEN+ + I+RPT+IT T EPFPGW EG+RT+DS+ + YGKG L CF
Sbjct: 240 FTKSMGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 299 LGDVKGIVDVIPXXXXXXXXXXXXXXXXKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRY 358
L DV + D+IP S V+ +YQVGSS +NP+IY +++ + Y
Sbjct: 300 LVDVNSVCDMIPADMVANAMIAAAATHAGG-SKVHMVYQVGSSHQNPIIYGEIREILFCY 358
Query: 359 FTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYND 418
FTK +++G + V K+ + +A F YMT+RY LP++ L+L + + +Y +
Sbjct: 359 FTKNSLRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKN 418
Query: 419 LNRKINFVMRLVELYRPYLFFGGIFDDKNTEKL--RLVARDN-GVETDIFYFDPKCIDWE 475
NRKI+ VMRLV+LY PY+ F GIFDD+NT+ L + DN E +F FDPK I W+
Sbjct: 419 KNRKIDMVMRLVKLYEPYVLFKGIFDDRNTKNLCAKQKEEDNRNSENFMFDFDPKIIKWK 478
Query: 476 DYFINTHIPGIVKYAFK 492
DY IN HIPG++ + K
Sbjct: 479 DYLINVHIPGLITHVLK 495
|
|
| TAIR|locus:2176407 FAR7 "fatty acid reductase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 848 (303.6 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 165/367 (44%), Positives = 234/367 (63%)
Query: 113 KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM 172
+L +++ + + ++RYDVAL +NTFGA +VLNF+KKC K +L+HVST +V GE G
Sbjct: 40 RLYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGH 99
Query: 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232
+ E F MG++LNG + +DI+ ER++ +Q+ + + +G SEE AMKD G+KRA++YG
Sbjct: 100 IVEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYG 159
Query: 233 WPNTYVFTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGK 292
WPNTYVFTK MGEM + H +E M + I+RPTIIT T+ +PFPGW EG++T+DS+ + YGK
Sbjct: 160 WPNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGK 219
Query: 293 GRLTCFLGDVKGIVDVIPXXXXXXXXXXXXXXXXKQPSDVNNIYQVGSSLRNPLIYTNLQ 352
G L CFL D K + D+IP S + +Y VGSS +NP+IY +
Sbjct: 220 GILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHD-SGSHTVYHVGSSNQNPVIYKQIY 278
Query: 353 DYAYRYFTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYF 412
+ RYF K P + ++G + V K+T +A F Y +RY LP++ L L +
Sbjct: 279 EMMSRYFMKSPLVGRNGMLI-VPKVTRISTLARFRVYTNLRYKLPIQILGLLSVISLSQ- 336
Query: 413 QSKYNDLNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCI 472
+ K+ NRK MRLV+LY+PY+ F GIFDDKN E LR+ +E +F +PKCI
Sbjct: 337 RDKFALHNRKFKMAMRLVKLYKPYVLFKGIFDDKNMETLRIKNEAKDMEK-LFGTNPKCI 395
Query: 473 DWEDYFI 479
DWEDYF+
Sbjct: 396 DWEDYFM 402
|
|
| TAIR|locus:2088664 MS2 "MALE STERILITY 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 187/497 (37%), Positives = 292/497 (58%)
Query: 3 LGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEI 62
LG ++ FL+ K L+TG+TGFLAK+ +EK+LR+ P+V K+YLL++A ++A R NE+
Sbjct: 122 LG-IISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEV 180
Query: 63 IGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122
+ +LF LKE +G + + K+ V G+I ++G++ ++ EE+ ++DV+IN AA
Sbjct: 181 LDAELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAA 239
Query: 123 TTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGD 182
T F+ERYDVALD+NT G +++ F+KKC KL + + VSTA+V G+ G + E F MGD
Sbjct: 240 NTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGD 299
Query: 183 TLNGASGLDIDVERQVVEQELN-ELQA--EGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239
+ + L+ + + V++E+ L+A +G + MKDLG++RA+ YGW +TYVF
Sbjct: 300 CIATENFLEGNRKALDVDREMKLALEAARKGTQNQDEAQKMKDLGLERARSYGWQDTYVF 359
Query: 240 TKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFL 299
TK MGEM I + ++ V I+RP++I TYK+PFPGW EG R +D + + YGKG+LT FL
Sbjct: 360 TKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQLTGFL 419
Query: 300 GDVKGIVDVIPXXXXXXXXXXXXXXXXKQPSDVN---NIYQVGSSLRNPLIYTNLQDYAY 356
D KG++DV+P SD N+YQ+ SS NPL++ +L + Y
Sbjct: 420 VDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELLY 479
Query: 357 RYFTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKY 416
++ P ++ G P+ V + +F+ + F ++ R GL ++ K
Sbjct: 480 NHYKTSPCMDSKGDPIMVRLMKLFNSVDDFSDHLW-RDAQERSGLMSGMSSVDSKMMQKL 538
Query: 417 NDLNRK-INFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWE 475
+ +K + L +Y PY F+GG FD+ NT+ RL+ + E F FD I+W
Sbjct: 539 KFICKKSVEQAKHLATIYEPYTFYGGRFDNSNTQ--RLMENMSEDEKREFGFDVGSINWT 596
Query: 476 DYFINTHIPGIVKYAFK 492
DY N HIPG+ ++ K
Sbjct: 597 DYITNVHIPGLRRHVLK 613
|
|
| DICTYBASE|DDB_G0289081 DDB_G0289081 "phospholipid/glycerol acyltransferase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 269 (99.8 bits), Expect = 7.8e-39, Sum P(2) = 7.8e-39
Identities = 57/168 (33%), Positives = 103/168 (61%)
Query: 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLF 68
F KT+L+TGATGF+ K+ +EK++R P+++K+Y+++R +AK RF +I+ ++
Sbjct: 7 FYAGKTVLITGATGFVGKVLLEKMVRDLPDIEKIYIIIRG-NAKE---RFEEDILQSRIW 62
Query: 69 RVLKEKNG-THLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD 127
K K G NA I K+ + GD+++E LG+ + + + ++++V+I+ AA+ +F
Sbjct: 63 DTCKAKMGEAAFNAHIHNKVVAIGGDLSKEGLGLSSEDYQTVV-DQVNVIIHCAASIDFR 121
Query: 128 ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYE 175
ER D A+ N + + ++L+ SK+ ++ VH STA+V G L E
Sbjct: 122 ERLDKAISSNLYASLNMLDLSKRLKNVVAYVHCSTAYVNSNREGWLDE 169
|
|
| FB|FBgn0039620 CG1443 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 241 (89.9 bits), Expect = 8.6e-35, Sum P(2) = 8.6e-35
Identities = 54/156 (34%), Positives = 90/156 (57%)
Query: 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLF 68
F ++K + +TG TGF KI +EK+LRV V ++YLL+R K A R ++ +F
Sbjct: 35 FYKDKGVFLTGGTGFFGKIIIEKLLRVT-EVGQIYLLIRTKKGKDAFARIE-DLFNDPVF 92
Query: 69 RVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDE 128
+K+ N + +IT++ GD + LG+ ++ RE + +++V++ AAT FDE
Sbjct: 93 AKMKQVNPKYRC-----QITIISGDCSLPGLGIS-ADERETIMENVNIVLHSAATVRFDE 146
Query: 129 RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164
+ +A+ +N G K ++ +K+ L LVHVSTAF
Sbjct: 147 KLKMAIAINVHGTKEIIKLAKEIVNLKALVHVSTAF 182
|
|
| UNIPROTKB|F1SGA0 FAR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 223 (83.6 bits), Expect = 4.8e-34, Sum P(2) = 4.8e-34
Identities = 48/162 (29%), Positives = 88/162 (54%)
Query: 3 LGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEI 62
+ + F K+IL+TGATGFL K+ +EK+ R P++K +Y+L+R ++ R +I
Sbjct: 1 MSMIAAFYGGKSILITGATGFLGKVLMEKLFRTSPDLKVIYILVRPKAGQTLQQRVF-QI 59
Query: 63 IGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122
+ LF +KE + + EKI + D+ + D + ++ +E+ + +++ + AA
Sbjct: 60 LNSKLFEKVKE-----VCPNVHEKIRAISADLNQSDFAISKEDM-QELLSYTNIIFHCAA 113
Query: 123 TTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164
T FD+ A+ LN + +L + + KL +H+STAF
Sbjct: 114 TVRFDDHLRHAVQLNVTATQQLLLMASQMPKLEAFIHISTAF 155
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q93ZB9 | FACR3_ARATH | 1, ., 2, ., 1, ., n, 2 | 0.6171 | 0.9939 | 0.9918 | yes | no |
| Q9XGY7 | FAR_SIMCH | 1, ., 2, ., 1, ., 8, 4 | 0.5897 | 0.9959 | 0.9939 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 492 | |||
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 0.0 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 1e-145 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 1e-110 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 4e-78 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 1e-19 | |
| cd09071 | 92 | cd09071, FAR_C, C-terminal domain of fatty acyl Co | 3e-19 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 2e-18 | |
| pfam03015 | 94 | pfam03015, Sterile, Male sterility protein | 9e-12 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 2e-11 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 6e-11 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 1e-06 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 7e-06 | |
| TIGR03443 | 1389 | TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh | 7e-06 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 8e-06 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 2e-05 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 3e-05 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 6e-05 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 5e-04 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 8e-04 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 0.001 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 0.002 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 0.002 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 0.002 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 858 bits (2218), Expect = 0.0
Identities = 332/493 (67%), Positives = 407/493 (82%), Gaps = 4/493 (0%)
Query: 2 ELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNE 61
E GS ++FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA+DAKSAT R H+E
Sbjct: 1 EEGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDE 60
Query: 62 IIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLA 121
+IGKDLF+VL+EK G +LN+LISEK+T VPGDI+ +DLGVKDSNLREEMW ++D+V+NLA
Sbjct: 61 VIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLA 120
Query: 122 ATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMG 181
ATTNFDERYDVAL +NT GA +VLNF+KKC K+ +L+HVSTA+V GE+SG++ E F MG
Sbjct: 121 ATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMG 180
Query: 182 DTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241
+TLNG LDI+ E+++V+++L EL + ASEE IT AMKDLG++RAK++GWPNTYVFTK
Sbjct: 181 ETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK 240
Query: 242 VMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301
MGEM + + KEN+ + I+RPT+IT TYKEPFPGW EG+RTIDS+ VGYGKG+LTCFL D
Sbjct: 241 AMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLAD 300
Query: 302 VKGIVDVIPADMVVNAIVVAVVAHA-KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360
++DVIPADMVVNA++VA+ AHA Q S++ IY VGSSL+NP+ ++NL D+AYRYF+
Sbjct: 301 PNSVLDVIPADMVVNAMIVAMAAHAGGQGSEI--IYHVGSSLKNPVKFSNLHDFAYRYFS 358
Query: 361 KKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLN 420
K PWINK+G PVKVGK T+ MASF YMT+RY+LPLK L+L N K + KY DLN
Sbjct: 359 KNPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQLVNIILPKRYGDKYTDLN 418
Query: 421 RKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNG-VETDIFYFDPKCIDWEDYFI 479
RKI VMRLV+LY+PY+FF GIFDD NTEKLR+ ++ G E D+F FDPK IDWEDY
Sbjct: 419 RKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMT 478
Query: 480 NTHIPGIVKYAFK 492
N HIPG+VKY K
Sbjct: 479 NVHIPGLVKYVLK 491
|
Length = 491 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 429 bits (1105), Expect = e-145
Identities = 199/494 (40%), Positives = 301/494 (60%), Gaps = 11/494 (2%)
Query: 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGK 65
+ EFL K L+TGATGFLAK+ +EKILR P+V K+YLL++A D ++A R NE+I
Sbjct: 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDA 172
Query: 66 DLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTN 125
+LF+ L+E +G + + K+ V G++ +LG+ + +L +E+ ++DV+IN AA T
Sbjct: 173 ELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGL-EPDLADEIAKEVDVIINSAANTT 231
Query: 126 FDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLN 185
FDERYDVA+D+NT G H+++F+KKC KL + + VSTA+V G+ G + E F+MGD +
Sbjct: 232 FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIA 291
Query: 186 GASGLDIDVERQV----VEQELN---ELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238
G+ + +E E+ + + G + MKDLG++RAK+YGW +TYV
Sbjct: 292 RELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV 351
Query: 239 FTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298
FTK MGEM I ++ ++ V I+RP++I T+K+PFPGW EG R +D + + YGKG+LT F
Sbjct: 352 FTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGF 411
Query: 299 LGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRY 358
L D G++DV+PADMVVNA + A+ H N+YQ+ SS+ NPL++ +L Y +
Sbjct: 412 LADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEH 471
Query: 359 FTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYND 418
+ P+++ G+P+ V + +F M F ++ R L GL +++ K Q N
Sbjct: 472 YKSSPYMDSKGRPIHVPPMKLFSSMEDFSSHLW-RDALLRSGLAGMSSSDRKLSQKLENI 530
Query: 419 LNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYF 478
+ + L +Y PY F+GG FD+ NT+ RL+ R + E F FD IDW DY
Sbjct: 531 CAKSVEQAKYLASIYEPYTFYGGRFDNSNTQ--RLMERMSEEEKAEFGFDVGSIDWRDYI 588
Query: 479 INTHIPGIVKYAFK 492
N HIPG+ ++ K
Sbjct: 589 TNVHIPGLRRHVMK 602
|
Length = 605 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 328 bits (843), Expect = e-110
Identities = 122/354 (34%), Positives = 184/354 (51%), Gaps = 37/354 (10%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLK 72
K++L+TGATGFL K+ +EK+LR P++ K+YLL+R +SA R + K R
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDR--- 57
Query: 73 EKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDV 132
G +LN L KI + GD++ +LG+ D +L + + +++++I+ AAT FDER D
Sbjct: 58 ---GRNLNPLFESKIVPIEGDLSEPNLGLSDEDL-QTLIEEVNIIIHCAATVTFDERLDE 113
Query: 133 ALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDI 192
AL +N G +L +K+C KL VHVSTA+V NG
Sbjct: 114 ALSINVLGTLRLLELAKRCKKLKAFVHVSTAYV-------------------NG------ 148
Query: 193 DVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA---KIYGWPNTYVFTKVMGEMFIE 249
+RQ++E+++ A+ I M DL ++RA + G PNTY FTK + E +
Sbjct: 149 --DRQLIEEKVYPPPADPEKLIDILELMDDLELERATPKLLGGHPNTYTFTKALAERLVL 206
Query: 250 HLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309
+ N+ + IVRP+I+ T KEPFPGW + D L + YGKG L D + D+I
Sbjct: 207 KERGNLPLVIVRPSIVGATLKEPFPGWIDNFNGPDGLFLAYGKGILRTMNADPNAVADII 266
Query: 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363
P D+V NA++ A + +Y GSS NP + ++ +Y K P
Sbjct: 267 PVDVVANALLAAAAYSGVRKPRELEVYHCGSSDVNPFTWGEAEELINQYLKKNP 320
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 4e-78
Identities = 99/303 (32%), Positives = 136/303 (44%), Gaps = 59/303 (19%)
Query: 17 VTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNG 76
+TGATGFL K+ +EK+LR P VK +Y L+RA D +SA R E++ LF LK
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVK-IYCLVRAKDGESALERLRQELLKYGLFDRLK---- 55
Query: 77 THLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDL 136
E+I V GD++ +LG+ D + +E+ ++DV+I+ AAT NF E Y
Sbjct: 56 ------ALERIIPVAGDLSEPNLGLSDED-FQELAEEVDVIIHNAATVNFVEPYSDLRAT 108
Query: 137 NTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVER 196
N G + VL +K+ K + HVSTA+V GE G+L E
Sbjct: 109 NVLGTREVLRLAKQM-KKLPFHHVSTAYVNGERGGLLEE--------------------- 146
Query: 197 QVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLKENMS 256
K + A + G PN Y +K + E + +
Sbjct: 147 ---------------------KPYKLDEDEPALLGGLPNGYTQSKWLAEQLVREAAGGLP 185
Query: 257 VAIVRPTIITGTYKEPFPGWAEGIR-TIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVV 315
V I RP+IITG E GW G L G G G L LGD +D++P D V
Sbjct: 186 VVIYRPSIITG---ESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPDARLDLVPVDYVA 242
Query: 316 NAI 318
NAI
Sbjct: 243 NAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 1e-19
Identities = 85/336 (25%), Positives = 131/336 (38%), Gaps = 87/336 (25%)
Query: 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKE 73
T+L+TGATGFL + ++L+ + NV K+Y L+RA D ++A R L LKE
Sbjct: 1 TVLLTGATGFLGAYLLRELLK-RKNVSKIYCLVRAKDEEAALER---------LIDNLKE 50
Query: 74 KNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKL----DVVINLAATTNFDER 129
+ L +I +V GD+++ +LG L ++ + +L DV+I+ A N+
Sbjct: 51 YGLNLWDELELSRIKVVVGDLSKPNLG-----LSDDDYQELAEEVDVIIHNGANVNWVYP 105
Query: 130 YDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASG 189
Y+ N G K +L + KL L VST V+ E +
Sbjct: 106 YEELKPANVLGTKELLKLAAT-GKLKPLHFVSTLSVFSAEE----------------YNA 148
Query: 190 LDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI- 248
LD + ++E + G PN Y+ +K + E +
Sbjct: 149 LDDEESDDMLESQN----------------------------GLPNGYIQSKWVAEKLLR 180
Query: 249 EHLKENMSVAIVRPTIITGTYKEPFPGWAEGI-RTIDSLAVGYGKGRLTCFLG-----DV 302
E + VAI+RP I G + GI T D L L
Sbjct: 181 EAANRGLPVAIIRPGNIFGDSE-------TGIGNTDDFFWR-----LLKGCLQLGIYPIS 228
Query: 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQV 338
+D+ P D V AI V A S+ +IY +
Sbjct: 229 GAPLDLSPVDWVARAI----VKLALNESNEFSIYHL 260
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Score = 81.8 bits (203), Expect = 3e-19
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 392 VRYILPLKGLELANAAFCKYFQSKYNDLNRKINFVMRLVELYRPYLFFGGIFDDKNTEKL 451
++LP L+L + + L RKI+ +L++L + FD+ NT L
Sbjct: 1 FLHLLPAYLLDLLLRLLGRK--PRLLKLYRKIH---KLLDLLEYFTTNEWRFDNDNTRAL 55
Query: 452 RLVARDNGVETDIFYFDPKCIDWEDYFINTHIPGIVKYAF 491
R + + ++F FD + IDW+DYF N +IPG+ KY
Sbjct: 56 W--ERLSEEDRELFNFDIRSIDWDDYFEN-YIPGLRKYLL 92
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 85.5 bits (212), Expect = 2e-18
Identities = 68/306 (22%), Positives = 114/306 (37%), Gaps = 77/306 (25%)
Query: 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEK 74
+ VTG TGFL + V+++L N K+ +L+R+ H I L
Sbjct: 1 VFVTGGTGFLGRHLVKRLL---ENGFKVLVLVRSESLG----EAHERIEEAGLEA----- 48
Query: 75 NGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVAL 134
+++ ++ GD+T+ +LG+ + RE K+D VI+ AA+ +F + A
Sbjct: 49 ----------DRVRVLEGDLTQPNLGLSAAASRELA-GKVDHVIHCAASYDFQAPNEDAW 97
Query: 135 DLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDV 194
N G +HVL + + +VSTA+V G G + E+ G
Sbjct: 98 RTNIDGTEHVLELAARLDI-QRFHYVSTAYVAGNREGNIRETELNPG------------- 143
Query: 195 ERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLKEN 254
+ N Y +K E +
Sbjct: 144 ------------------------------------QNFKNPYEQSKAEAEQLVRAAATQ 167
Query: 255 MSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGK-GRLTCFLGDVKGIVDVIPADM 313
+ + + RP+I+ G K G E I + L K GR G+ ++++P D
Sbjct: 168 IPLTVYRPSIVVGDSKT---GRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDY 224
Query: 314 VVNAIV 319
V +AIV
Sbjct: 225 VADAIV 230
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|111859 pfam03015, Sterile, Male sterility protein | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 9e-12
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 418 DLNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDY 477
L RKI+ + +E+ +P+ IFD+KNT +LR + + +F FD + +DW++Y
Sbjct: 25 KLYRKIH---KGLEVLQPFSLNEWIFDNKNTRELREKMSEE--DKKLFNFDMESLDWDEY 79
Query: 478 FINTHIPGIVKYAFK 492
F N I GI KY K
Sbjct: 80 FRN-AIRGIRKYLLK 93
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 27/167 (16%)
Query: 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKE 73
T+L+TGATGFL +E++LR K+ L+RAA +E + R
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQA-KVICLVRAA----------SEEHAMERLREALR 49
Query: 74 KNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKL----DVVINLAATTNFDER 129
L E+I +V GD++ LG L + W +L D +++ A N+
Sbjct: 50 SYRLWHEDLARERIEVVAGDLSEPRLG-----LSDAEWERLAENVDTIVHNGALVNWVYP 104
Query: 130 YDVALDLNTFGAKHVLNFSKKCA--KLIVLVHVSTAFV--WGEESGM 172
Y N G + VL A + L +VST V + S +
Sbjct: 105 YSELRGANVLGTREVLRL---AASGRAKPLHYVSTISVGAAIDLSTV 148
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 6e-11
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 23/157 (14%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLK 72
+ +L+TGATGFL + ++L K+ L+RA ++A R + F + +
Sbjct: 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARL------EKTFDLYR 52
Query: 73 EKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKL----DVVINLAATTNFDE 128
H + L ++++ +V GD+ DLG L E W +L D++I+ AA N
Sbjct: 53 -----HWDELSADRVEVVAGDLAEPDLG-----LSERTWQELAENVDLIIHNAALVNHVF 102
Query: 129 RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165
Y N G VL + K L +VS+ V
Sbjct: 103 PYSELRGANVLGTAEVLRLAAT-GKPKPLHYVSSISV 138
|
Length = 382 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 1e-06
Identities = 38/177 (21%), Positives = 71/177 (40%), Gaps = 37/177 (20%)
Query: 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKE 73
VTG TGF+ + V ++L + +++L+R L
Sbjct: 2 RYFVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRRQSL--------------SRLEALAA 46
Query: 74 KNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVA 133
G +++ + GD+T LG+ ++++ +D V++LAA YD+
Sbjct: 47 YWGA-------DRVVPLVGDLTEPGLGLSEADI--AELGDIDHVVHLAAI------YDLT 91
Query: 134 LD------LNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTL 184
D N G ++V+ +++ + HVS+ V G+ G+ E F G L
Sbjct: 92 ADEEAQRAANVDGTRNVVELAER-LQAATFHHVSSIAVAGDYEGVFREDDFDEGQGL 147
|
Length = 657 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 47.6 bits (113), Expect = 7e-06
Identities = 61/329 (18%), Positives = 101/329 (30%), Gaps = 99/329 (30%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLK 72
ILVTG GF+ VE+ L AA +++ G D R
Sbjct: 1 MRILVTGGAGFIGSHLVER--------------LLAAG---------HDVRGLDRLRDGL 37
Query: 73 EKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF----DE 128
+ + + V D+T DL + E D VI+LAA ++
Sbjct: 38 DPLLSG--------VEFVVLDLTDRDL------VDELAKGVPDAVIHLAAQSSVPDSNAS 83
Query: 129 RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGAS 188
LD+N G ++L ++ A + V S+ S
Sbjct: 84 DPAEFLDVNVDGTLNLLEAARA-AGVKRFVFASS------------------------VS 118
Query: 189 GLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248
+ D ++++L + N Y +K+ E +
Sbjct: 119 VVYGDPPPLPIDEDLGPPR-------------------------PLNPYGVSKLAAEQLL 153
Query: 249 E--HLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306
+ V I+RP + G +P I L G + GD
Sbjct: 154 RAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKG---EPIIVIGGDGSQTR 210
Query: 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNI 335
D + D V +A+++A+ V NI
Sbjct: 211 DFVYVDDVADALLLAL---ENPDGGVFNI 236
|
Length = 314 |
| >gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 7e-06
Identities = 86/364 (23%), Positives = 137/364 (37%), Gaps = 87/364 (23%)
Query: 11 ENKTILVTGATGFLAKIFVEKIL--RVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLF 68
T+ +TGATGFL + +L R N K++ +RA ++ R
Sbjct: 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNF-KVFAHVRAKSEEAGLERLRKTGTTYG-- 1026
Query: 69 RVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKL----DVVINLAATT 124
+ E+ + +I +V GD+++E G L +E W+ L DV+I+ A
Sbjct: 1027 -IWDEE--------WASRIEVVLGDLSKEKFG-----LSDEKWSDLTNEVDVIIHNGALV 1072
Query: 125 NFDERYDVALDLNTFGAKHVLNF-SKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDT 183
++ Y D N G +VLN ++ AK V ++A
Sbjct: 1073 HWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSA-------------------- 1112
Query: 184 LNGASGLDIDVERQVVEQELNELQAEGAS--EEAITLA--MKDLGIKRAKIYGWPNTYVF 239
+D E V +EL G + E+ L K LG Y
Sbjct: 1113 --------LDTEYYV--NLSDELVQAGGAGIPESDDLMGSSKGLG----------TGYGQ 1152
Query: 240 TKVMGEMFI-EHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298
+K + E I E K + IVRP +TG K G D + KG +
Sbjct: 1153 SKWVAEYIIREAGKRGLRGCIVRPGYVTGDSK-------TGATNTDDFLLRMLKGCIQ-- 1203
Query: 299 LG---DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLR---NPLIYTNLQ 352
LG ++ V+++P D V +VVA + + S++ + V R N + T L+
Sbjct: 1204 LGLIPNINNTVNMVPVDHVAR-VVVAAALNPPKESEL-AVAHVTGHPRIRFNDFLGT-LK 1260
Query: 353 DYAY 356
Y Y
Sbjct: 1261 TYGY 1264
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 8e-06
Identities = 64/313 (20%), Positives = 97/313 (30%), Gaps = 106/313 (33%)
Query: 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEK 74
ILVTGATGFL V +L V+ A VR
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVR-------------ALVR----------------- 30
Query: 75 NGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-----DER 129
+G+ L + +V GD+T D+ D V +LAA T+ E
Sbjct: 31 SGSDAVLLDGLPVEVVEGDLT-------DAASLAAAMKGCDRVFHLAAFTSLWAKDRKEL 83
Query: 130 YDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASG 189
Y N G ++VL+ + + A + +VH S+ G
Sbjct: 84 YRT----NVEGTRNVLDAALE-AGVRRVVHTSSIAALGGPPD------------------ 120
Query: 190 LDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE-MFI 248
G +E + PN Y +K++ E +
Sbjct: 121 --------------------GRIDETTPWNERPF----------PNDYYRSKLLAELEVL 150
Query: 249 EHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308
E E + V IV P+ + G + G+ +D L G+L + VDV
Sbjct: 151 EAAAEGLDVVIVNPSAVFGPG--DEGPTSTGLDVLDYL-----NGKLPAYPPGGTSFVDV 203
Query: 309 IPADMVVNAIVVA 321
V + A
Sbjct: 204 ---RDVAEGHIAA 213
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 76 GTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKL--DVVINLAATTNFD---ERY 130
GT L + + ++ R +L + D + E+ + DVVIN AA T D
Sbjct: 13 GTELRRALPGEFEVIA--TDRAELDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEP 70
Query: 131 DVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW-GEESGMLYES 176
++A +N GA+++ + + LVH+ST +V+ GE+ G E+
Sbjct: 71 ELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKGGPYKET 115
|
Length = 281 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 38/161 (23%), Positives = 54/161 (33%), Gaps = 38/161 (23%)
Query: 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKE 73
ILVTG GF+ FV IL P E+I D K
Sbjct: 1 RILVTGGAGFIGSNFVRYILNEHP---------------------DAEVIVLD-----KL 34
Query: 74 KNGTHLNALI----SEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDER 129
+L L + + V GDI D + E ++ D V++ AA ++ D
Sbjct: 35 TYAGNLENLADLEDNPRYRFVKGDIG--DRELVSRLFTE---HQPDAVVHFAAESHVDRS 89
Query: 130 YDVALDL---NTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167
N G +L +K H+ST V+G
Sbjct: 90 ISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYG 130
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 6e-05
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 37/149 (24%)
Query: 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRV 70
+ KTILVTG G + V +IL+ P KKL + R +E L +
Sbjct: 1 KGKTILVTGGAGSIGSELVRQILKFGP--KKLIVFDR------------DE---NKLHEL 43
Query: 71 LKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATT------ 124
++E + +K+ + GD+ ++ +E D+V + AA
Sbjct: 44 VRELRSRFPH----DKLRFIIGDVRDKER---LRRAFKER--GPDIVFHAAALKHVPSME 94
Query: 125 -NFDERYDVALDLNTFGAKHVLNFSKKCA 152
N +E A+ N G K+V++ + +
Sbjct: 95 DNPEE----AIKTNVLGTKNVIDAAIENG 119
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 5e-04
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 35/156 (22%)
Query: 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLF 68
L+ KTIL+TGA G + V+ IL V AAD + E +GK+
Sbjct: 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVI-------AADIDKEALNELLESLGKE-- 51
Query: 69 RVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTN--- 125
S+K++LV DIT ++ + + E + K+D +N A N
Sbjct: 52 -------------FKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDY 98
Query: 126 ----FDERYDVALDLNTFGAKHV---LNFSKKCAKL 154
FD D D N + H+ FS++ AK
Sbjct: 99 GKKFFDVSLD---DFNENLSLHLGSSFLFSQQFAKY 131
|
Length = 256 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 8e-04
Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 40/145 (27%)
Query: 13 KTILVTGATG----FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLF 68
T+L+TG TG LA+ + + L L+ R A A
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEG------ARHLVLVSRRGPAPGA-------------- 40
Query: 69 RVLKEKNGTHLNALISEKITLVPGDITREDLGVKD--SNLREEMWNKLDVVINLAATTN- 125
+ L AL ++T+ D+ D + + L + LD V++ A +
Sbjct: 41 ----AELVAELEAL-GAEVTVAACDVADRD-ALAALLAALPAALG-PLDGVVHNAGVLDD 93
Query: 126 ------FDERYDVALDLNTFGAKHV 144
ER++ L GA ++
Sbjct: 94 GPLEELTPERFERVLAPKVTGAWNL 118
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 45/231 (19%), Positives = 72/231 (31%), Gaps = 66/231 (28%)
Query: 114 LDVVINLAATTNFDERYDVALDL---NTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170
LDVV++LAA +D + N G ++L ++K V+ S+A V+G
Sbjct: 31 LDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRF-VYASSASVYGS-- 87
Query: 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230
+ E E ++
Sbjct: 88 ------------------PEGLPEE-------------EETPPRPLSP------------ 104
Query: 231 YGWPNTYVFTKVMGEMFIEHLKE--NMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAV 288
YG +K+ E + E + V I+R + G P + A+
Sbjct: 105 YG------VSKLAAEHLLRSYGESYGLPVVILRLANVYGPG--QRPRLDGVVNDFIRRAL 156
Query: 289 GYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVG 339
LT F G D I D VV AI+ A + P + +Y +G
Sbjct: 157 --EGKPLTVF-GGGNQTRDFIHVDDVVRAILHA----LENPLEGGGVYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.002
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 39/173 (22%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYL--LLRAADAKS-ATVRFHNEIIGKDLFR 69
ILVTG GF+ FV +L P+ K + L L A + ++ V
Sbjct: 1 MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVS------------ 48
Query: 70 VLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDER 129
S + V GDI +L V EE K+D VI+ AA ++ D
Sbjct: 49 -------------SSPRYRFVKGDICDAEL-VDRL-FEEE---KIDAVIHFAAESHVDRS 90
Query: 130 YD---VALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE--ESGMLYESS 177
+ N G +L ++K + VH+ST V+G+ + G E+S
Sbjct: 91 ISDPEPFIRTNVLGTYTLLEAARK-YGVKRFVHISTDEVYGDLLDDGEFTETS 142
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 45/192 (23%), Positives = 65/192 (33%), Gaps = 47/192 (24%)
Query: 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKD-LFRVLKE 73
ILVTGA G L + LL R A +IG D L R
Sbjct: 1 ILVTGAAGGLGR-----------------LLARRLAAS-------PRVIGVDGLDRRRPP 36
Query: 74 KNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVA 133
+ K+ V DI RE + D V++LA +
Sbjct: 37 GS--------PPKVEYVRLDIRDPAA---ADVFRE---READAVVHLAFILDPPRDGAER 82
Query: 134 LDLNTFGAKHVLNFSKKCAKLIV--LVHVSTAFVWG---EESGMLYESSFKMGDTLNGAS 188
+N G ++VL+ CA V +V S+ V+G + L E + G S
Sbjct: 83 HRINVDGTQNVLD---ACAAAGVPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYS 139
Query: 189 GLDIDVERQVVE 200
+VE+ + E
Sbjct: 140 RDKAEVEQLLAE 151
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.002
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 76 GTHLNALISEK-ITLVPGDITREDLGVKDSN-----LREEMWNKLDVVINLAATTNFD-- 127
G L L++E+ + +V + R +L + D +RE + DVV+N AA T D
Sbjct: 11 GRELTRLLAERGVEVVA--LDRPELDLTDPEAVAALVREA---RPDVVVNAAAYTAVDKA 65
Query: 128 ERY-DVALDLNTFGAKHVLNFSKKCAKL-IVLVHVSTAFVWGEESGMLYE 175
E ++A +N G ++ ++ CA L+H+ST +V+ G Y
Sbjct: 66 ESEPELAYAVNALGPGNL---AEACAARGAPLIHISTDYVFDGAKGGPYR 112
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 492 | |||
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.98 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.98 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.98 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.98 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.97 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.97 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.97 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.97 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.97 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.97 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.97 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.97 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.97 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.97 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.97 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.97 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.97 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.97 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.97 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.97 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.97 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.96 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.96 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.96 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.96 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.96 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.96 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.96 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.96 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.96 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.95 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.95 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.95 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.95 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.95 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.95 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.95 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.95 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.95 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.95 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.94 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.94 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.93 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.93 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.92 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.9 | |
| PF03015 | 94 | Sterile: Male sterility protein; InterPro: IPR0042 | 99.89 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.88 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.87 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.86 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.85 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.85 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.84 | |
| cd09071 | 92 | FAR_C C-terminal domain of fatty acyl CoA reductas | 99.84 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.83 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.81 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.81 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.8 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.8 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.79 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.79 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.79 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.79 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.78 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.77 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.75 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.74 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.74 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.74 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.73 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.73 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.72 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.72 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.72 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.71 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.69 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.69 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.69 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.68 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.68 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.68 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.67 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.67 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.67 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.66 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.66 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.66 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.66 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.65 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.65 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.63 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.63 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.63 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.63 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.63 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.63 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.62 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.62 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.62 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.62 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.61 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.61 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.61 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.61 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.61 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.61 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.6 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.59 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.59 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.59 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.59 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.59 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.58 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.58 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.58 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.57 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.57 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.56 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.56 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.55 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.55 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.54 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.54 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.54 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.53 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.53 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.51 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.5 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.5 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.49 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.49 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.49 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.49 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.49 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.48 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.48 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.48 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.47 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.46 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.46 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.46 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.46 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.46 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.45 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.44 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.44 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.44 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.44 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.44 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.43 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.42 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.42 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.41 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.41 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.4 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.4 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.4 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.36 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.36 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.35 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.33 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.33 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.33 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.33 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.3 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.29 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.27 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.25 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.25 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.25 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.21 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.18 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.16 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.14 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.1 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.08 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.06 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.04 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.03 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.01 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.0 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.98 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.97 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.97 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.96 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.92 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.87 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.83 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.83 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.77 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.75 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.7 | |
| PLN00106 | 323 | malate dehydrogenase | 98.56 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.39 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.39 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.37 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.35 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.33 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.28 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.23 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.02 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.96 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.93 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.86 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.81 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.76 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.7 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.65 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.57 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.57 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.52 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.48 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.31 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.31 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.27 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.21 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.19 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.17 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.15 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.13 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.91 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.88 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.75 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.74 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 96.7 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.68 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.62 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.6 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 96.53 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.46 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.45 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.44 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.37 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.34 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.1 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.07 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.07 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.05 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 95.99 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 95.92 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.92 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 95.9 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.85 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 95.77 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 95.75 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.73 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 95.71 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.67 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.61 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 95.58 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 95.55 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 95.54 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.52 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 95.46 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 95.46 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 95.37 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 95.34 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 95.33 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 95.27 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 95.25 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 95.25 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 95.2 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.14 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 95.09 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 94.98 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 94.97 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 94.92 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 94.91 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 94.83 | |
| PRK07411 | 390 | hypothetical protein; Validated | 94.67 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 94.64 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 94.59 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 94.58 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 94.5 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.49 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 94.46 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 94.44 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 94.26 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 94.22 | |
| PLN02602 | 350 | lactate dehydrogenase | 94.13 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 93.97 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 93.94 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 93.94 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 93.9 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 93.47 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 93.45 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 93.43 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 93.33 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 93.27 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 93.22 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 93.2 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 93.15 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 93.13 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 93.08 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 93.08 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 92.87 | |
| cd01493 | 425 | APPBP1_RUB Ubiquitin activating enzyme (E1) subuni | 92.84 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 92.79 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.69 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 92.56 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 92.37 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 92.3 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 92.28 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 91.97 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 91.89 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 91.79 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 91.78 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 91.75 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 91.63 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.42 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 91.09 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 91.05 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 90.71 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 90.71 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 90.67 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 90.56 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 90.44 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 90.43 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 90.41 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 90.37 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 90.31 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 90.2 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 90.16 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 90.13 | |
| TIGR01408 | 1008 | Ube1 ubiquitin-activating enzyme E1. This model re | 90.04 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 89.84 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 89.74 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 89.73 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 89.62 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 89.23 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 88.78 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 88.77 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 88.77 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 88.64 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 88.51 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 87.84 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 87.58 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 87.57 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 87.33 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 87.2 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 87.08 | |
| KOG1496 | 332 | consensus Malate dehydrogenase [Energy production | 86.69 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 86.54 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 86.38 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 86.32 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 86.22 | |
| PF05185 | 448 | PRMT5: PRMT5 arginine-N-methyltransferase; InterPr | 86.08 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 86.05 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 85.95 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 85.74 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 85.67 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 85.46 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 85.46 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 85.29 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 85.26 | |
| KOG2018 | 430 | consensus Predicted dinucleotide-utilizing enzyme | 84.96 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 84.76 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 84.7 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 84.64 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 84.54 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 84.24 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 84.22 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 83.96 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 83.92 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 83.75 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 83.69 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 83.6 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 83.57 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 83.07 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 82.96 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 82.9 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 82.86 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 82.62 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 82.5 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 82.5 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 82.35 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 82.34 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 82.22 | |
| cd01490 | 435 | Ube1_repeat2 Ubiquitin activating enzyme (E1), rep | 82.14 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 82.11 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 82.06 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 81.92 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 81.86 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 81.78 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 81.73 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 81.54 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 81.53 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 81.16 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 80.95 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 80.71 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 80.51 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 80.44 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 80.37 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 80.36 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 80.3 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 80.21 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 80.02 |
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-92 Score=696.61 Aligned_cols=451 Identities=41% Similarity=0.674 Sum_probs=410.6
Q ss_pred CCcccHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchh
Q 037479 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLN 80 (492)
Q Consensus 1 ~~~~~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~ 80 (492)
|+.+++.+||++|+|||||||||+|++++|+||+..++|++||+|+|+++++++.+|++ ++...++|+.+++..|..
T Consensus 1 ~~~~~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~-~~~~~~lF~~l~~~~p~~-- 77 (467)
T KOG1221|consen 1 MEISDIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLR-TELKDPLFEVLKEKKPEA-- 77 (467)
T ss_pred CCcccHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHH-HHHhhhHHHHHHhhCccc--
Confidence 45667999999999999999999999999999999999999999999999999999999 566669999999999863
Q ss_pred hhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 81 ALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
.+++.++.||+++++||+|+.|.. .+.++||+|||+||+++|+++++.++.+|+.||++++++|+++.+++.|||+
T Consensus 78 ---l~Kv~pi~GDi~~~~LGis~~D~~-~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhV 153 (467)
T KOG1221|consen 78 ---LEKVVPIAGDISEPDLGISESDLR-TLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHV 153 (467)
T ss_pred ---eecceeccccccCcccCCChHHHH-HHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEe
Confidence 489999999999999999999976 8889999999999999999999999999999999999999999999999999
Q ss_pred eeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 161 STAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 161 ST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
||+|+++ ..+.++|++|+.... .+++..+++. ++++++.+++ ++++...+|||+|++|
T Consensus 154 STAy~n~-~~~~i~E~~y~~~~~------~~~~~~i~~~---------~~~~~~~ld~------~~~~l~~~~PNTYtfT 211 (467)
T KOG1221|consen 154 STAYSNC-NVGHIEEKPYPMPET------CNPEKILKLD---------ENLSDELLDQ------KAPKLLGGWPNTYTFT 211 (467)
T ss_pred ehhheec-ccccccccccCcccc------CCHHHHHhhh---------ccchHHHHHH------hhHHhcCCCCCceeeh
Confidence 9999994 456899999997542 2566655544 4566777766 4455566999999999
Q ss_pred HHHHHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHH
Q 037479 241 KVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 241 K~~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
|++||+++.++..++|++|+|||+|.+++.+|+|||++|.+++.+++.++++|.++.+.++++...|+||||+|||++++
T Consensus 212 Kal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia 291 (467)
T KOG1221|consen 212 KALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIA 291 (467)
T ss_pred HhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCC-CCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCCCCCCCCcEEecceeeeccHHHHHHHHHHHHHHhHH
Q 037479 321 AVVAHAKQPS-DVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLK 399 (492)
Q Consensus 321 ~~~~~~~~~~-~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~ 399 (492)
++|....... ....+||++++..||++|+++.+...+++.+.|+. +.+|+|...+.++.+.|.++.++.|.+|++
T Consensus 292 ~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~Pl~----~~iw~P~~~~~sn~~~f~~~~~~~h~lPa~ 367 (467)
T KOG1221|consen 292 SAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKIPLE----KMIWYPFGTLTSNPWLFNLAAFLYHTLPAY 367 (467)
T ss_pred HHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcccCCcc----cceeccCceeeecHhHHHHHHHHHHHhhHH
Confidence 9987553321 01569999999999999999999999999999998 789999999999999999999999999999
Q ss_pred HHHHHHHHhccccchhHHHHHHHHHHHHHHHHhccccccceEEeechhHHHHHHHhhhcCCccceeecCCCCCCHHHHHh
Q 037479 400 GLELANAAFCKYFQSKYNDLNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFI 479 (492)
Q Consensus 400 ~~d~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~f~~~~w~F~~~n~~~l~~~l~~~d~~~~~F~~d~~~idW~~Y~~ 479 (492)
++|+++++.|++ |++.+++++ +++.+++++||+.++|+|+++|+.+|+..|+++| +.+|+||++++||++|+.
T Consensus 368 ~~d~~~~i~g~k--~~~~k~~~k---i~~~~~~l~~f~~~~w~Fd~~n~~~L~~~~~~~d--~~~f~fd~~~ldW~ey~~ 440 (467)
T KOG1221|consen 368 ILDLLLRLLGKK--PRLVKLYRK---IHKLVKLLEPFSLFKWIFDNKNTEKLREKMSEED--KRLFNFDMKQLDWEEYFN 440 (467)
T ss_pred HHHHHHHHhCCC--hhhhHHHHH---HHHHHHhhhhheeceEEecCccHHHHHHhCCHHH--HhhcCCCcccCCHHHHHH
Confidence 999999999887 886665555 5677889999999999999999999999999999 559999999999999998
Q ss_pred ccchhhHHHhhcC
Q 037479 480 NTHIPGIVKYAFK 492 (492)
Q Consensus 480 ~~~~~G~r~y~lk 492 (492)
+ |++|+|+|++|
T Consensus 441 ~-~i~G~r~~llK 452 (467)
T KOG1221|consen 441 R-HLLGLRKYLLK 452 (467)
T ss_pred H-HHHHHHHHHhc
Confidence 8 79999999997
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-87 Score=691.68 Aligned_cols=489 Identities=67% Similarity=1.124 Sum_probs=447.4
Q ss_pred cccHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhh
Q 037479 3 LGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNAL 82 (492)
Q Consensus 3 ~~~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~ 82 (492)
.+.|.+||+||+|||||||||||++|+++||+.+++|++||+|+|++++.++.+|+..++...++|+++++..|..+.++
T Consensus 2 ~~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~ 81 (491)
T PLN02996 2 EGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSL 81 (491)
T ss_pred cccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhh
Confidence 46799999999999999999999999999999999999999999999999999999878999999999999988777666
Q ss_pred ccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 83 ISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
..++++++.||+++++|||++.+..+.+++++|+|||+||.+++++++..++++|+.||.+++++|++++++++|||+||
T Consensus 82 ~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST 161 (491)
T PLN02996 82 ISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST 161 (491)
T ss_pred hhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence 67899999999999999999988666788899999999999999888899999999999999999999767899999999
Q ss_pred ceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 163 AFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 163 ~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
++|||...+.++|++|++..+.....+.|++++...+++.+.+...+.++++.++..++++|++++.+.+|+|+|++||+
T Consensus 162 ~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~ 241 (491)
T PLN02996 162 AYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKA 241 (491)
T ss_pred eEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHH
Confidence 99999887889999999877665556788998888777666777777799999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHH
Q 037479 243 MGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAV 322 (492)
Q Consensus 243 ~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~ 322 (492)
+||+++.++..++|++|+||++|+|+.++|++||++++.++.+++.++++|..+.++++++..+|+|||||||++++.++
T Consensus 242 ~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~ 321 (491)
T PLN02996 242 MGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM 321 (491)
T ss_pred HHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence 99999998877999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCCCCCCCCcEEecceeeeccHHHHHHHHHHHHHHhHHHHH
Q 037479 323 VAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWINKDGKPVKVGKITVFHDMASFYRYMTVRYILPLKGLE 402 (492)
Q Consensus 323 ~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~P~~~~d 402 (492)
+........ +++||++++..+|+||.++++.+.+++++.|+.+..|+.+|+|.+.++.+.+.|..+..+.|.+|++++|
T Consensus 322 ~~~~~~~~~-~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~~~~ 400 (491)
T PLN02996 322 AAHAGGQGS-EIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQ 400 (491)
T ss_pred HHhhccCCC-CcEEEecCCCCCcccHHHHHHHHHHHhhhCCCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHHHHH
Confidence 863211111 6799999988899999999999999999999987788899999999999999999988888899999999
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHHhccccccceEEeechhHHHHHHHhhhcC-CccceeecCCCCCCHHHHHhcc
Q 037479 403 LANAAFCKYFQSKYNDLNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNG-VETDIFYFDPKCIDWEDYFINT 481 (492)
Q Consensus 403 ~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~f~~~~w~F~~~n~~~l~~~l~~~d-~~~~~F~~d~~~idW~~Y~~~~ 481 (492)
++..+++.+.+|++.++++++...+++.++|++|++++|.|+++|+++|+..|+++| .|+++|+||++.+||++|++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~~f~~d~~~~~w~~y~~~~ 480 (491)
T PLN02996 401 LVNIILPKRYGDKYTDLNRKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNV 480 (491)
T ss_pred HHHHHhhhccChHHHHHHHHHHHHHHHHHHhhccccceEEEccHHHHHHHHHCCccccccccEeccCcccCCHHHHHHHh
Confidence 998855544579999999999888899999999999999999999999999999977 4566999999999999999997
Q ss_pred chhhHHHhhcC
Q 037479 482 HIPGIVKYAFK 492 (492)
Q Consensus 482 ~~~G~r~y~lk 492 (492)
|++|+|+|++|
T Consensus 481 ~~~g~~~y~~k 491 (491)
T PLN02996 481 HIPGLVKYVLK 491 (491)
T ss_pred hHHHHHHHhcC
Confidence 79999999997
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-82 Score=658.84 Aligned_cols=471 Identities=40% Similarity=0.748 Sum_probs=401.6
Q ss_pred cHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 5 SVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 5 ~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
.|.+||++|+|||||||||||++|+++||+.+++|++||+|+|++++.++.+|+.+++++.++|++++++.|..+.++..
T Consensus 112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~ 191 (605)
T PLN02503 112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFML 191 (605)
T ss_pred chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccc
Confidence 48999999999999999999999999999999999999999999999999999987899999999999998876666667
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
++++++.||+++++|||++++. +.+.+++|+|||+||.++++++++.++++|+.||.+++++|++++++++|||+||++
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~-~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay 270 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLA-DEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY 270 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHH-HHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence 8999999999999999987764 477789999999999999998899999999999999999999987789999999999
Q ss_pred eecccccceeccccCCCCCCCC-----------CCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 165 VWGEESGMLYESSFKMGDTLNG-----------ASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 165 v~~~~~~~i~E~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
|||...+.|.|+.|+.++.+.. .+++|++++++++.+.... ..+++.+.+.|+++|++++.+++|
T Consensus 271 VyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~----~~~~~~~~~~l~~~g~~~~~~~~~ 346 (605)
T PLN02503 271 VNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRH----GFQSNSFAQKMKDLGLERAKLYGW 346 (605)
T ss_pred eecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhc----ccchHHHHHHhhhcccchhhhCCC
Confidence 9999988999999986654322 2567999988877332221 224556777889999999999999
Q ss_pred CchHHHHHHHHHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 234 PNTYVFTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
||+|++||++||++++++..++|++|+||++|.+++++|+|||+++.....+.+..+++|.++.++++++...|+||||+
T Consensus 347 pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~ 426 (605)
T PLN02503 347 QDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADM 426 (605)
T ss_pred CChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecH
Confidence 99999999999999998878999999999999999999999999997666676777789999999999999999999999
Q ss_pred hhhHHHHHHHhhhcC-CCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCCCCCCCCcEEecceeeeccHHHHHHHHHH
Q 037479 314 VVNAIVVAVVAHAKQ-PSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWINKDGKPVKVGKITVFHDMASFYRYMTV 392 (492)
Q Consensus 314 va~~ii~~~~~~~~~-~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 392 (492)
|||++++|++..... ... +++|||+++..||++|+++.+.+.+++.+.|+....+.+++.|...+......|.
T Consensus 427 vvna~i~a~a~~~~~~~~~-~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~----- 500 (605)
T PLN02503 427 VVNATLAAMAKHGGAAKPE-INVYQIASSVVNPLVFQDLARLLYEHYKSSPYMDSKGRPIHVPPMKLFSSMEDFS----- 500 (605)
T ss_pred HHHHHHHHHHhhhcccCCC-CCEEEeCCCCCCCeEHHHHHHHHHHHHhhCCcccccCcceeccCceehhhHHHHH-----
Confidence 999999996543322 112 7899999999999999999999999999999885545555555555554433332
Q ss_pred HHHHhHHHHHHHHHHh--ccc-cchhHHHHHH-----HHHHHHHHHHhccccccceEEeechhHHHHHHHhhhcCCccce
Q 037479 393 RYILPLKGLELANAAF--CKY-FQSKYNDLNR-----KINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDI 464 (492)
Q Consensus 393 ~~~~P~~~~d~~~~~~--g~~-~~~~~~~l~~-----~~~~~~~~~~~~~~f~~~~w~F~~~n~~~l~~~l~~~d~~~~~ 464 (492)
.| ++.|++.++. |.+ .+|.+.+..+ .++++..+.++|+||++++|.|+++|+++|+..|+++| |++
T Consensus 501 ~h----~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~D--r~~ 574 (605)
T PLN02503 501 SH----LWRDALLRSGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEE--KAE 574 (605)
T ss_pred HH----HHHHHHHHHhhhcccccChHHHHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHH--hhc
Confidence 22 2456666553 321 3466666553 34567789999999999999999999999999999999 559
Q ss_pred eecCCCCCCHHHHHhccchhhHHHhhcC
Q 037479 465 FYFDPKCIDWEDYFINTHIPGIVKYAFK 492 (492)
Q Consensus 465 F~~d~~~idW~~Y~~~~~~~G~r~y~lk 492 (492)
|+||++.|||++||.++|++|+|+|++|
T Consensus 575 F~~D~~~idW~~Y~~~~~i~G~rky~lk 602 (605)
T PLN02503 575 FGFDVGSIDWRDYITNVHIPGLRRHVMK 602 (605)
T ss_pred cCCCcCCCCHHHHHHHhhhhHHHHHHhc
Confidence 9999999999999997679999999997
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=322.23 Aligned_cols=246 Identities=30% Similarity=0.495 Sum_probs=168.8
Q ss_pred EeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCCCC
Q 037479 17 VTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITR 96 (492)
Q Consensus 17 ITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~ 96 (492)
|||||||||++|+++|++.++.+ +||+|+|+++...+.+|+.+.+.....++...++ ..++|+++.||+++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~--------~~~ri~~v~GDl~~ 71 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDKE--------ALSRIEVVEGDLSQ 71 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HH--------HTTTEEEEE--TTS
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhhh--------hhccEEEEeccccc
Confidence 79999999999999999998777 9999999998889999998777777777765422 24899999999999
Q ss_pred CCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccccceecc
Q 037479 97 EDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYES 176 (492)
Q Consensus 97 ~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~i~E~ 176 (492)
++|||++++. +.+.+++|+||||||.+++..+++.+.++||.||++++++|.+. +.++|+|+||+++.+...+.+.|+
T Consensus 72 ~~lGL~~~~~-~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~ 149 (249)
T PF07993_consen 72 PNLGLSDEDY-QELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEK 149 (249)
T ss_dssp GGGG--HHHH-HHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SS
T ss_pred cccCCChHHh-hccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCccccc
Confidence 9999988775 48889999999999999999999999999999999999999987 445999999988888876555554
Q ss_pred ccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHhc--CC
Q 037479 177 SFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLK--EN 254 (492)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~~--~~ 254 (492)
.+++.. ........++|+|..||++||+++.++. .+
T Consensus 150 ~~~~~~------------------------------------------~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g 187 (249)
T PF07993_consen 150 VYPEEE------------------------------------------DDLDPPQGFPNGYEQSKWVAERLLREAAQRHG 187 (249)
T ss_dssp S-HHH--------------------------------------------EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-
T ss_pred cccccc------------------------------------------ccchhhccCCccHHHHHHHHHHHHHHHHhcCC
Confidence 432100 0111123678999999999999999883 48
Q ss_pred CcEEEEeCCceecCCCCCCCccccCcC-chHHHHHhccCceeeEEecCCCcccceeehhhhhhHH
Q 037479 255 MSVAIVRPTIITGTYKEPFPGWAEGIR-TIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAI 318 (492)
Q Consensus 255 ~~~~ivRPs~v~g~~~~p~~gw~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~i 318 (492)
+|++|+||+.|+| .+.+||.+... ....+...+..|..+..+++++...|+||||+||++|
T Consensus 188 ~p~~I~Rp~~i~g---~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 188 LPVTIYRPGIIVG---DSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp --EEEEEE-EEE----SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred ceEEEEecCcccc---cCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 9999999999999 44578888776 4555666677788887888888889999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=288.55 Aligned_cols=255 Identities=22% Similarity=0.241 Sum_probs=194.7
Q ss_pred EEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCCC
Q 037479 16 LVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDIT 95 (492)
Q Consensus 16 lITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~ 95 (492)
||||||||||++|+++|++.|+ +.+|.++.|........ .+. ..+...++.||++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~-~~~-----------------------~~~~~~~~~~Di~ 55 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLK-DLQ-----------------------KSGVKEYIQGDIT 55 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccch-hhh-----------------------cccceeEEEeccc
Confidence 6999999999999999999996 55778888766543211 000 0133348999999
Q ss_pred CCCCCCCchhhHHHhccCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc---c
Q 037479 96 REDLGVKDSNLREEMWNKLDVVINLAATTNFD--ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE---S 170 (492)
Q Consensus 96 ~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~---~ 170 (492)
+.+.+..+++++|+|||+||.+... .+.+.++++|+.||++|+++|++. ++++|||+||+.|++.. .
T Consensus 56 -------d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~ 127 (280)
T PF01073_consen 56 -------DPESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGD 127 (280)
T ss_pred -------cHHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCC
Confidence 6666778999999999999988664 356789999999999999999998 89999999999998762 1
Q ss_pred cce--eccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 171 GML--YESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 171 ~~i--~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
..+ +|.. +. +..+.+.|+.||++||+++
T Consensus 128 ~~~~~dE~~-----------~~---------------------------------------~~~~~~~Y~~SK~~AE~~V 157 (280)
T PF01073_consen 128 PIINGDEDT-----------PY---------------------------------------PSSPLDPYAESKALAEKAV 157 (280)
T ss_pred CcccCCcCC-----------cc---------------------------------------cccccCchHHHHHHHHHHH
Confidence 111 1211 00 1136789999999999999
Q ss_pred HHhc-------CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHH
Q 037479 249 EHLK-------ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVA 321 (492)
Q Consensus 249 ~~~~-------~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~ 321 (492)
++.. ..+.+++|||+.|||+.+..+ ...++..+..|......+++....++++|+|||.+++.|
T Consensus 158 ~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~---------~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA 228 (280)
T PF01073_consen 158 LEANGSELKNGGRLRTCALRPAGIYGPGDQRL---------VPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLA 228 (280)
T ss_pred HhhcccccccccceeEEEEeccEEeCcccccc---------cchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHH
Confidence 9873 249999999999999987432 122333444555556778888999999999999999999
Q ss_pred HHhhhcC---CCCCCcEEEecCCCCCccc-HHHHHHHHHHHhhcCCC
Q 037479 322 VVAHAKQ---PSDVNNIYQVGSSLRNPLI-YTNLQDYAYRYFTKKPW 364 (492)
Q Consensus 322 ~~~~~~~---~~~~~~iy~i~~~~~~~~t-~~e~~~~~~~~~~~~p~ 364 (492)
+...... ....|+.|+|+++ .|+. +.+|...+.+.+|..+.
T Consensus 229 ~~~L~~~~~~~~~~G~~y~itd~--~p~~~~~~f~~~~~~~~G~~~~ 273 (280)
T PF01073_consen 229 AQALLEPGKPERVAGQAYFITDG--EPVPSFWDFMRPLWEALGYPPP 273 (280)
T ss_pred HHHhccccccccCCCcEEEEECC--CccCcHHHHHHHHHHHCCCCCC
Confidence 8753221 1111899999999 8999 99999999999997653
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=265.16 Aligned_cols=257 Identities=22% Similarity=0.286 Sum_probs=203.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+||||||+||||+|.+.+|++.|++| .++..-..+... -+. ...+.+++|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~v---vV~DNL~~g~~~--~v~------------------------~~~~~f~~g 51 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEV---VVLDNLSNGHKI--ALL------------------------KLQFKFYEG 51 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeE---EEEecCCCCCHH--Hhh------------------------hccCceEEe
Confidence 689999999999999999999999876 555443322110 000 011588999
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|+. |.+.+.++++ ++|.|||+||..... +.+..+++.|+.||.+|+++|++. ++++|||.|||.|||
T Consensus 52 Di~-------D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG 123 (329)
T COG1087 52 DLL-------DRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYG 123 (329)
T ss_pred ccc-------cHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcC
Confidence 999 7777777776 799999999987654 346788999999999999999998 899999999999999
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
.... .|.|+. +..+.|+|+.||.+.|+
T Consensus 124 ~p~~~PI~E~~----------------------------------------------------~~~p~NPYG~sKlm~E~ 151 (329)
T COG1087 124 EPTTSPISETS----------------------------------------------------PLAPINPYGRSKLMSEE 151 (329)
T ss_pred CCCCcccCCCC----------------------------------------------------CCCCCCcchhHHHHHHH
Confidence 8753 344432 22578999999999999
Q ss_pred HHHHh--cCCCcEEEEeCCceecCCCCC-CCccccCcCchHHHHHhccCceeeE--Ee------cCCCcccceeehhhhh
Q 037479 247 FIEHL--KENMSVAIVRPTIITGTYKEP-FPGWAEGIRTIDSLAVGYGKGRLTC--FL------GDVKGIVDVIPADMVV 315 (492)
Q Consensus 247 ~v~~~--~~~~~~~ivRPs~v~g~~~~p-~~gw~~~~~~~~~~~~~~~~g~~~~--~~------~~~~~~~d~v~vddva 315 (492)
++..+ ..+++++++|..++.|+..+. +..|-.+.....+++.....|+... ++ .||...+|+|||.|+|
T Consensus 152 iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA 231 (329)
T COG1087 152 ILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLA 231 (329)
T ss_pred HHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHH
Confidence 99987 567999999999999987643 3445566666667777777676543 33 4678999999999999
Q ss_pred hHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 316 NAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 316 ~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
++++.|+....+ .+. ..+||+++| +-.|..|+++.+.+..|+.
T Consensus 232 ~aH~~Al~~L~~-~g~-~~~~NLG~G--~G~SV~evi~a~~~vtg~~ 274 (329)
T COG1087 232 DAHVLALKYLKE-GGS-NNIFNLGSG--NGFSVLEVIEAAKKVTGRD 274 (329)
T ss_pred HHHHHHHHHHHh-CCc-eeEEEccCC--CceeHHHHHHHHHHHhCCc
Confidence 999999986544 322 469999999 8999999999999999964
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=286.81 Aligned_cols=265 Identities=15% Similarity=0.165 Sum_probs=196.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH-HHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA-TVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~-~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++|+|||||||||||++|+++|++.|++ |+++.|...+... ...+. ...+ .....++.
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~---V~~~d~~~~~~~~~~~~~~-------------~~~~----~~~~~~~~ 72 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQT---VIGLDNFSTGYQHNLDDVR-------------TSVS----EEQWSRFI 72 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCCCcchhhhhhhh-------------hccc----cccCCceE
Confidence 57799999999999999999999999864 5888885432211 11100 0000 00114688
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
++.||+. +.+.+..+++++|+|||+||..... .......++|+.||.+++++|++. ++++|||+||+.+
T Consensus 73 ~~~~Di~-------d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~v 144 (348)
T PRK15181 73 FIQGDIR-------KFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSST 144 (348)
T ss_pred EEEccCC-------CHHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHh
Confidence 9999999 5545567788999999999975432 345567999999999999999997 8999999999999
Q ss_pred eccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 166 WGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 166 ~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
||...+ .+.|+. +..+.+.|+.||..+
T Consensus 145 yg~~~~~~~~e~~----------------------------------------------------~~~p~~~Y~~sK~~~ 172 (348)
T PRK15181 145 YGDHPDLPKIEER----------------------------------------------------IGRPLSPYAVTKYVN 172 (348)
T ss_pred hCCCCCCCCCCCC----------------------------------------------------CCCCCChhhHHHHHH
Confidence 986421 112211 114567899999999
Q ss_pred HHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHH
Q 037479 245 EMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAV 322 (492)
Q Consensus 245 E~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~ 322 (492)
|++++.+ ..+++++++||+.|||+...+...+ . ..+..++..+..|....+.+++.+.+|+|||||+|++++.++
T Consensus 173 e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~-~--~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~ 249 (348)
T PRK15181 173 ELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAY-S--AVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSA 249 (348)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCcCCCCCCcc-c--cCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHH
Confidence 9999876 4589999999999999987542111 0 224455666666766677899999999999999999998877
Q ss_pred HhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 323 VAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 323 ~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
........ +++||++++ .++|++|+++.+.+.++.
T Consensus 250 ~~~~~~~~--~~~yni~~g--~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 250 TTNDLASK--NKVYNVAVG--DRTSLNELYYLIRDGLNL 284 (348)
T ss_pred hcccccCC--CCEEEecCC--CcEeHHHHHHHHHHHhCc
Confidence 53211111 689999998 899999999999988864
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=258.92 Aligned_cols=259 Identities=22% Similarity=0.295 Sum_probs=208.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|++|||||.||||+.+++.+++..++. +|.++..=.-... .+-+. .+. ..++..+++|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~-~v~~~DkLTYAgn-~~~l~-~~~-------------------~~~~~~fv~~ 58 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDD-HVVNLDKLTYAGN-LENLA-DVE-------------------DSPRYRFVQG 58 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCc-eEEEEecccccCC-HHHHH-hhh-------------------cCCCceEEec
Confidence 689999999999999999999998873 5666654321111 11111 010 1268899999
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
||. |.+.+.++++ ++|+|+|.||..+.+ ..+..++++|+.||.+||+++++.....+|+|+||--|||
T Consensus 59 DI~-------D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG 131 (340)
T COG1088 59 DIC-------DRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYG 131 (340)
T ss_pred ccc-------CHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccc
Confidence 999 6666778887 699999999998876 4568899999999999999999984335899999999999
Q ss_pred ccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 168 EESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 168 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
+... ++..+++ ..+..|.++|..||+.+..+
T Consensus 132 ~l~~--~~~~FtE-----------------------------------------------~tp~~PsSPYSASKAasD~l 162 (340)
T COG1088 132 DLGL--DDDAFTE-----------------------------------------------TTPYNPSSPYSASKAASDLL 162 (340)
T ss_pred cccC--CCCCccc-----------------------------------------------CCCCCCCCCcchhhhhHHHH
Confidence 7531 1112222 12336889999999999999
Q ss_pred HHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 248 IEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 248 v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
++.+ ..|+|++|.|+|+-|||++.|- ..++.++..+..|+...++|+|.+.+||++|+|-++|+-..+.+.
T Consensus 163 Vray~~TYglp~~ItrcSNNYGPyqfpE-------KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg 235 (340)
T COG1088 163 VRAYVRTYGLPATITRCSNNYGPYQFPE-------KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKG 235 (340)
T ss_pred HHHHHHHcCCceEEecCCCCcCCCcCch-------hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcC
Confidence 9998 4599999999999999999762 456677889999999999999999999999999999999888742
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. . |++||++++ +..+.-++.+.+.+.+++..
T Consensus 236 ~--~---GE~YNIgg~--~E~~Nlevv~~i~~~l~~~~ 266 (340)
T COG1088 236 K--I---GETYNIGGG--NERTNLEVVKTICELLGKDK 266 (340)
T ss_pred c--C---CceEEeCCC--ccchHHHHHHHHHHHhCccc
Confidence 2 2 899999999 88999999999999999764
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=264.63 Aligned_cols=263 Identities=19% Similarity=0.222 Sum_probs=202.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+++|+|||||||||+++++.||++||. |++++|+..+....+-++ ++ . ...+++..+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~---V~gtVR~~~~~k~~~~L~-~l------------~------~a~~~l~l~ 62 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYT---VRGTVRDPEDEKKTEHLR-KL------------E------GAKERLKLF 62 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCE---EEEEEcCcchhhhHHHHH-hc------------c------cCcccceEE
Confidence 6799999999999999999999999985 499999988755443333 11 0 113668999
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchh--HHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDER--YDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~--~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
.+|+. +++....+++++|.|||+|+++.++.. ..+.++.++.||.|++++|++.+.++|+|++||+.+...
T Consensus 63 ~aDL~-------d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~ 135 (327)
T KOG1502|consen 63 KADLL-------DEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRY 135 (327)
T ss_pred ecccc-------ccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhcc
Confidence 99999 666778999999999999999988633 568999999999999999999977999999999776643
Q ss_pred c------ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 169 E------SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 169 ~------~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
+ ...++|+.+. |.+ .... --+-|..||.
T Consensus 136 ~~~~~~~~~vvdE~~ws-----------d~~---------------------~~~~--------------~~~~Y~~sK~ 169 (327)
T KOG1502|consen 136 NGPNIGENSVVDEESWS-----------DLD---------------------FCRC--------------KKLWYALSKT 169 (327)
T ss_pred CCcCCCCCcccccccCC-----------cHH---------------------HHHh--------------hHHHHHHHHH
Confidence 3 1244555443 111 1100 1268999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHH
Q 037479 243 MGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 243 ~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
+||+..+++ ..+++++.+.|+.|+||.-.|.+ +.....+..+.+|.....+ .....+|||+|||+|++.
T Consensus 170 lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l------~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDVA~AHv~ 240 (327)
T KOG1502|consen 170 LAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSL------NSSLNALLKLIKGLAETYP---NFWLAFVDVRDVALAHVL 240 (327)
T ss_pred HHHHHHHHHHHhCCccEEEecCCceECCCccccc------chhHHHHHHHHhcccccCC---CCceeeEeHHHHHHHHHH
Confidence 999999988 45899999999999999886632 4445666677777554332 233449999999999999
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCCC
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWI 365 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~~ 365 (492)
|+++... .+.|.|++. ..++.|+.+.+.+.+...+..
T Consensus 241 a~E~~~a-----~GRyic~~~---~~~~~ei~~~l~~~~P~~~ip 277 (327)
T KOG1502|consen 241 ALEKPSA-----KGRYICVGE---VVSIKEIADILRELFPDYPIP 277 (327)
T ss_pred HHcCccc-----CceEEEecC---cccHHHHHHHHHHhCCCCCCC
Confidence 9985332 567999986 456999999999998876643
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=271.85 Aligned_cols=281 Identities=24% Similarity=0.299 Sum_probs=203.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++||+||||||+|.+|+++||.+-+ .+|+|+||.++.+.+.+|+++..-....+ +....++|+++.|
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~~~~~-----------~e~~~~ri~vv~g 67 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRHW-----------DELSADRVEVVAG 67 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhhhhhh-----------hhhhcceEEEEec
Confidence 5899999999999999999999765 79999999999999999998433212222 2334589999999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM 172 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~ 172 (492)
|+++|++||++.++. .+.+.+|.|||+||.+++-.++......||.||..++++|... ++|.|+|+||+.|.......
T Consensus 68 Dl~e~~lGL~~~~~~-~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~ 145 (382)
T COG3320 68 DLAEPDLGLSERTWQ-ELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYS 145 (382)
T ss_pred ccccccCCCCHHHHH-HHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccC
Confidence 999999999988875 8889999999999999999999999999999999999999986 78899999999998654321
Q ss_pred eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-
Q 037479 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL- 251 (492)
Q Consensus 173 i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 251 (492)
-.+....+.+ -+...-..+.++|+.||+.||.++++.
T Consensus 146 ~~~~~~~~~~------------------------------------------~~~~~~~~~~~GY~~SKwvaE~Lvr~A~ 183 (382)
T COG3320 146 NFTVDFDEIS------------------------------------------PTRNVGQGLAGGYGRSKWVAEKLVREAG 183 (382)
T ss_pred CCcccccccc------------------------------------------ccccccCccCCCcchhHHHHHHHHHHHh
Confidence 1111000000 000011257899999999999999988
Q ss_pred cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhc----
Q 037479 252 KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAK---- 327 (492)
Q Consensus 252 ~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~---- 327 (492)
..|+|++|+||+.|.|... .|-.........++.++.. +...| +.....|.+|+|.++.++.........
T Consensus 184 ~rGLpv~I~Rpg~I~gds~---tG~~n~~D~~~Rlv~~~~~--lg~~P-~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~ 257 (382)
T COG3320 184 DRGLPVTIFRPGYITGDSR---TGALNTRDFLTRLVLGLLQ--LGIAP-DSEYSLDMLPVDHVARAVVAPSVQVAEAIAA 257 (382)
T ss_pred hcCCCeEEEecCeeeccCc---cCccccchHHHHHHHHHHH--hCCCC-CcccchhhCccceeeEEeehhhhhHHHHHHH
Confidence 4589999999999999987 3333333344444443331 11222 345566889988888876655443220
Q ss_pred ---CCCCCCcEEEecCCCCCcccHHHHHHHHHH
Q 037479 328 ---QPSDVNNIYQVGSSLRNPLIYTNLQDYAYR 357 (492)
Q Consensus 328 ---~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~ 357 (492)
.+......|+ .......+...++.+...+
T Consensus 258 l~~~~~~~f~~~~-~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 258 LGAHSDIRFNQLH-MLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred hccCccchhhhee-cccCCCccchhHHHHhHhh
Confidence 0000023455 2233378999999988877
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=270.78 Aligned_cols=285 Identities=21% Similarity=0.244 Sum_probs=191.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.|+|||||||||||++|+++|++. |+ +|+++.|+.... .++. .. +. .....++++
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~---~V~~l~r~~~~~---~~l~----~~----------~~---~~~~~~~~~ 69 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH---KVLALDVYNDKI---KHLL----EP----------DT---VPWSGRIQF 69 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC---EEEEEecCchhh---hhhh----cc----------cc---ccCCCCeEE
Confidence 4579999999999999999999998 45 458888754321 1110 00 00 001246899
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+.+|++ +.+.+..+++++|+||||||.... .......+..|+.|+.+++++|++. + ++|||+||..+|
T Consensus 70 ~~~Dl~-------d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vY 140 (386)
T PLN02427 70 HRINIK-------HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVY 140 (386)
T ss_pred EEcCCC-------ChHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeee
Confidence 999999 555566778899999999997543 2334456788999999999999986 4 799999999999
Q ss_pred ccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
|...+ .++|.. | ....+.... .+|+.-. ........+.+.|+.||..+|
T Consensus 141 g~~~~~~~~e~~-p----~~~~~~~~~------------------~~e~~~~-------~~~~~~~~~~~~Y~~sK~~~E 190 (386)
T PLN02427 141 GKTIGSFLPKDH-P----LRQDPAFYV------------------LKEDESP-------CIFGSIEKQRWSYACAKQLIE 190 (386)
T ss_pred CCCcCCCCCccc-c----ccccccccc------------------ccccccc-------cccCCCCccccchHHHHHHHH
Confidence 86432 222221 0 000000000 0000000 000000124578999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccc---cCc-CchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWA---EGI-RTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~---~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii 319 (492)
+++..+ ..+++++++||+.|||+.....++.. ... ..+..++..+..|....+.+++...+|+|||+|+|++++
T Consensus 191 ~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~ 270 (386)
T PLN02427 191 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVL 270 (386)
T ss_pred HHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHH
Confidence 999876 45899999999999999864333210 001 122334445556666567788888899999999999999
Q ss_pred HHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
.++.+..... +++||++++. .++|+.|+++.+.+.++.
T Consensus 271 ~al~~~~~~~---g~~yni~~~~-~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 271 LMIENPARAN---GHIFNVGNPN-NEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred HHHhCccccc---CceEEeCCCC-CCccHHHHHHHHHHHhcc
Confidence 9987432112 6799999861 389999999999999885
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=266.61 Aligned_cols=266 Identities=18% Similarity=0.184 Sum_probs=192.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
|+|||||||||||++|+++|++. |+ +|+++.|+... ..++. ...+++++.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~---~V~~~~r~~~~---~~~~~-----------------------~~~~~~~~~ 52 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDW---EVYGMDMQTDR---LGDLV-----------------------NHPRMHFFE 52 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCC---eEEEEeCcHHH---HHHhc-----------------------cCCCeEEEe
Confidence 68999999999999999999986 45 56888875421 00110 014688999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
+|+++ +.+.+..+++++|+|||+||.... ...+...+++|+.||.+++++|++. + ++|||+||+.+||.
T Consensus 53 ~Dl~~------~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~ 124 (347)
T PRK11908 53 GDITI------NKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGM 124 (347)
T ss_pred CCCCC------CHHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeecc
Confidence 99973 233445677899999999996532 3445677899999999999999987 5 79999999999986
Q ss_pred ccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 169 ESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 169 ~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
..+ .+.|+..+. +. .....+.+.|+.||..+|++
T Consensus 125 ~~~~~~~ee~~~~----------~~-----------------------------------~~~~~p~~~Y~~sK~~~e~~ 159 (347)
T PRK11908 125 CPDEEFDPEASPL----------VY-----------------------------------GPINKPRWIYACSKQLMDRV 159 (347)
T ss_pred CCCcCcCcccccc----------cc-----------------------------------CcCCCccchHHHHHHHHHHH
Confidence 432 222221110 00 00013567899999999999
Q ss_pred HHHh--cCCCcEEEEeCCceecCCCCCCCccccC-cCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 248 IEHL--KENMSVAIVRPTIITGTYKEPFPGWAEG-IRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 248 v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
+..+ ..+++++++||+.|||+...+...--.+ ...+..++..+..|....+.+++++.+++|||+|+|++++.++.+
T Consensus 160 ~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~ 239 (347)
T PRK11908 160 IWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIEN 239 (347)
T ss_pred HHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhC
Confidence 9887 4689999999999999986542110001 122445666666676656677888999999999999999998874
Q ss_pred hhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 325 HAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
...... +++||++++. +++|++|+++.+.+.++..|
T Consensus 240 ~~~~~~--g~~yni~~~~-~~~s~~e~~~~i~~~~~~~~ 275 (347)
T PRK11908 240 KDGVAS--GKIYNIGNPK-NNHSVRELANKMLELAAEYP 275 (347)
T ss_pred ccccCC--CCeEEeCCCC-CCcCHHHHHHHHHHHhcCcc
Confidence 321111 6899999851 47999999999999998654
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=287.21 Aligned_cols=265 Identities=22% Similarity=0.294 Sum_probs=196.5
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+||++|+|||||||||||++|+++|++.|+.+ +|+++.|...... ...+. .. ....++
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~-~V~~~d~~~~~~~-~~~l~-------------~~-------~~~~~v 59 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYPDY-KIVVLDKLDYCSN-LKNLN-------------PS-------KSSPNF 59 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCCCC-EEEEEeCCCccch-hhhhh-------------hc-------ccCCCe
Confidence 58999999999999999999999999986553 6778877432111 11110 00 012578
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc--cCccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW--NKLDVVINLAATTNFDE---RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~--~~vd~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
+++.+|++ +.+....++ .++|+|||+||....+. .....+++|+.||.+++++|++.+.+++|||+||
T Consensus 60 ~~~~~Dl~-------d~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS 132 (668)
T PLN02260 60 KFVKGDIA-------SADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
T ss_pred EEEECCCC-------ChHHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 99999999 444443433 58999999999876542 3456789999999999999999845899999999
Q ss_pred ceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 163 AFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 163 ~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
..+||...... ..+. .++ .+..+.+.|+.||.
T Consensus 133 ~~vyg~~~~~~---~~~~----~E~-----------------------------------------~~~~p~~~Y~~sK~ 164 (668)
T PLN02260 133 DEVYGETDEDA---DVGN----HEA-----------------------------------------SQLLPTNPYSATKA 164 (668)
T ss_pred hHHhCCCcccc---ccCc----ccc-----------------------------------------CCCCCCCCcHHHHH
Confidence 99998653210 0000 000 01135688999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHH
Q 037479 243 MGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 243 ~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
.+|+++..+ ..+++++|+||+.|||+...+. .....++..+..|....+++++++.+++|||+|+|+++..
T Consensus 165 ~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-------~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~ 237 (668)
T PLN02260 165 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEV 237 (668)
T ss_pred HHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-------cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHH
Confidence 999999876 3589999999999999976431 2233455555666665677899999999999999999998
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
++... .. +++||++++ +++|+.|+++.+.+.+|..+
T Consensus 238 ~l~~~--~~---~~vyni~~~--~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 238 VLHKG--EV---GHVYNIGTK--KERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred HHhcC--CC---CCEEEECCC--CeeEHHHHHHHHHHHhCCCC
Confidence 87632 11 689999998 89999999999999998653
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.4e-31 Score=269.77 Aligned_cols=293 Identities=14% Similarity=0.142 Sum_probs=193.3
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCc-CH---HHHHHHHhhcChhhHHHHHhcCCchhhhc
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAK-SA---TVRFHNEIIGKDLFRVLKEKNGTHLNALI 83 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~-~~---~~r~~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (492)
.-+++|+|||||||||||++|+++|++.|++| +++.|..... .. .+++. .+ . ...+.+.. +....
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V---~~~d~~~~~~~~~~~~~~~~~-~~-~-~~~~~l~~-----~~~~~ 111 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEV---AIVDNLCRRLFDHQLGLDSLT-PI-A-SIHERVRR-----WKEVS 111 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCeE---EEEeccccccccccccccccc-cc-c-chHHHHHH-----HHHhh
Confidence 34678999999999999999999999999754 6665421110 00 00000 00 0 00000100 00000
Q ss_pred cCceEEEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc------hhHHHHHHHhHHHHHHHHHHHHhcccce
Q 037479 84 SEKITLVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD------ERYDVALDLNTFGAKHVLNFSKKCAKLI 155 (492)
Q Consensus 84 ~~~v~~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~ 155 (492)
..++.++.+|++ +.+.+..+++ ++|+|||+|+..... +.....+++|+.||.+++++|++. +++
T Consensus 112 ~~~v~~v~~Dl~-------d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv~ 183 (442)
T PLN02572 112 GKEIELYVGDIC-------DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-APD 183 (442)
T ss_pred CCcceEEECCCC-------CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CCC
Confidence 146889999999 5555556666 589999999864322 123455789999999999999987 665
Q ss_pred -eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 156 -VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 156 -~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
+|||+||..+||.....++|...+......++. ...+..+.
T Consensus 184 ~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~--------------------------------------~~~~~~P~ 225 (442)
T PLN02572 184 CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDT--------------------------------------LPYPKQAS 225 (442)
T ss_pred ccEEEEecceecCCCCCCCccccccccccccccc--------------------------------------ccCCCCCC
Confidence 899999999998643334444322110000000 00012456
Q ss_pred chHHHHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCC---CccccCc-------CchHHHHHhccCceeeEEecCC
Q 037479 235 NTYVFTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPF---PGWAEGI-------RTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~---~gw~~~~-------~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
+.|+.||..+|.+++.+ ..+++++++||+.|||+...+. +..+..+ ..+..++..+..|....+.+++
T Consensus 226 s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G 305 (442)
T PLN02572 226 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKG 305 (442)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCC
Confidence 89999999999999877 4589999999999999986431 1111000 2234555666677665677899
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHH---hhcC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRY---FTKK 362 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~---~~~~ 362 (492)
++.+|+|||||+|++++.++.... ..+. ..+||+++ .++|+.|+++.+.+. +|..
T Consensus 306 ~~~Rdfi~V~Dva~a~~~al~~~~-~~g~-~~i~Nigs---~~~si~el~~~i~~~~~~~g~~ 363 (442)
T PLN02572 306 GQTRGFLDIRDTVRCIEIAIANPA-KPGE-FRVFNQFT---EQFSVNELAKLVTKAGEKLGLD 363 (442)
T ss_pred CEEECeEEHHHHHHHHHHHHhChh-hcCc-eeEEEeCC---CceeHHHHHHHHHHHHHhhCCC
Confidence 999999999999999999987422 1111 36899975 469999999999998 6643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-31 Score=287.14 Aligned_cols=265 Identities=20% Similarity=0.338 Sum_probs=193.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHh--hCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 13 KTILVTGATGFLAKIFVEKILR--VQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~--~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
|+|||||||||||++|+++|++ .|+ +|++++|+... .++. + +.... ...+++++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~---~V~~l~R~~~~----~~~~-~---------~~~~~-------~~~~v~~~ 56 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA---TVHVLVRRQSL----SRLE-A---------LAAYW-------GADRVVPL 56 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC---EEEEEECcchH----HHHH-H---------HHHhc-------CCCcEEEE
Confidence 5899999999999999999994 554 67999995421 1211 0 00110 01578999
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.+|+++++++++.... +.+ +++|+||||||..++........++|+.||.+++++|++. ++++|||+||..++|...
T Consensus 57 ~~Dl~~~~~~~~~~~~-~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~ 133 (657)
T PRK07201 57 VGDLTEPGLGLSEADI-AEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYE 133 (657)
T ss_pred ecccCCccCCcCHHHH-HHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCcc
Confidence 9999999888865543 355 8999999999988777667778899999999999999997 789999999999998654
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
+..+|+..+. ...+.+.|+.||+.+|+++.+
T Consensus 134 ~~~~e~~~~~-------------------------------------------------~~~~~~~Y~~sK~~~E~~~~~ 164 (657)
T PRK07201 134 GVFREDDFDE-------------------------------------------------GQGLPTPYHRTKFEAEKLVRE 164 (657)
T ss_pred Cccccccchh-------------------------------------------------hcCCCCchHHHHHHHHHHHHH
Confidence 3333332210 013567899999999999986
Q ss_pred hcCCCcEEEEeCCceecCCCCCCCccccCcCch---HHHHHhccC-ceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 251 LKENMSVAIVRPTIITGTYKEPFPGWAEGIRTI---DSLAVGYGK-GRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 251 ~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~---~~~~~~~~~-g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
. .+++++|+||+.|||+...+ ..++..+. ..++..... .....+.+.+....++|||||++++++.++.. .
T Consensus 165 ~-~g~~~~ilRp~~v~G~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~-~ 239 (657)
T PRK07201 165 E-CGLPWRVYRPAVVVGDSRTG---EMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHK-D 239 (657)
T ss_pred c-CCCcEEEEcCCeeeecCCCC---ccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcC-c
Confidence 3 58999999999999986532 22222221 122322211 11112345556678999999999999888763 2
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
... +++||++++ +++|+.|+++.+.+.+|..+
T Consensus 240 ~~~---g~~~ni~~~--~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 240 GRD---GQTFHLTDP--KPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred CCC---CCEEEeCCC--CCCcHHHHHHHHHHHhCCCc
Confidence 222 789999998 89999999999999998754
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-31 Score=271.00 Aligned_cols=253 Identities=15% Similarity=0.162 Sum_probs=189.3
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|||||||||||++|+++|++.|++ |+++.|...+.. +.+. .+ . ...+++++.
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~---V~~ldr~~~~~~--~~~~-~~---------~----------~~~~~~~~~ 174 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDE---VIVIDNFFTGRK--ENLV-HL---------F----------GNPRFELIR 174 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCCCccH--hHhh-hh---------c----------cCCceEEEE
Confidence 489999999999999999999999975 478877533211 1110 00 0 014678888
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
+|+.++ .+.++|+||||||.... ..+....+++|+.||.+++++|++. +. +|||+||.+|||.
T Consensus 175 ~Di~~~------------~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg~ 240 (436)
T PLN02166 175 HDVVEP------------ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYGD 240 (436)
T ss_pred Cccccc------------cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhCC
Confidence 998732 23579999999996542 2456778999999999999999997 54 7999999999986
Q ss_pred ccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 169 ESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 169 ~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
..+ .++|..+... .+..+.+.|+.||..+|++
T Consensus 241 ~~~~p~~E~~~~~~-----------------------------------------------~p~~p~s~Yg~SK~~aE~~ 273 (436)
T PLN02166 241 PLEHPQKETYWGNV-----------------------------------------------NPIGERSCYDEGKRTAETL 273 (436)
T ss_pred CCCCCCCccccccC-----------------------------------------------CCCCCCCchHHHHHHHHHH
Confidence 532 3334322110 0113467899999999999
Q ss_pred HHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 248 IEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 248 v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
++.+ ..+++++++||+.|||+...+.. -..+..++..+..|....+++++++.+|+|||+|+|++++.++...
T Consensus 274 ~~~y~~~~~l~~~ilR~~~vYGp~~~~~~-----~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~ 348 (436)
T PLN02166 274 AMDYHRGAGVEVRIARIFNTYGPRMCLDD-----GRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE 348 (436)
T ss_pred HHHHHHHhCCCeEEEEEccccCCCCCCCc-----cchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC
Confidence 9887 35899999999999998763211 1234456667777776677899999999999999999999888631
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. .++||++++ .++|+.|+++.+.+.++...
T Consensus 349 ---~---~giyNIgs~--~~~Si~ela~~I~~~~g~~~ 378 (436)
T PLN02166 349 ---H---VGPFNLGNP--GEFTMLELAEVVKETIDSSA 378 (436)
T ss_pred ---C---CceEEeCCC--CcEeHHHHHHHHHHHhCCCC
Confidence 1 569999998 89999999999999998643
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.6e-31 Score=263.46 Aligned_cols=254 Identities=17% Similarity=0.262 Sum_probs=188.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|||||||||||++|+++|++.|+++ +++.++.........+. .. ....++.++.+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~---v~~~~~~~~~~~~~~~~-------------~~-------~~~~~~~~~~~ 58 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDA---VVVVDKLTYAGNLMSLA-------------PV-------AQSERFAFEKV 58 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCE---EEEEecCccccchhhhh-------------hc-------ccCCceEEEEC
Confidence 689999999999999999999998753 33333322111111110 00 00146788999
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhc--------ccceeEEE
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKC--------AKLIVLVH 159 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~~~~~~V~ 159 (492)
|++ +.+..+.+++ ++|+|||+||..... +.....+++|+.||.+++++|++. +++++|||
T Consensus 59 Dl~-------d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~ 131 (355)
T PRK10217 59 DIC-------DRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHH 131 (355)
T ss_pred CCc-------ChHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEE
Confidence 999 4444556666 499999999986543 345778999999999999999863 25679999
Q ss_pred eeeceeeccccc---ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 160 VSTAFVWGEESG---MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 160 vST~~v~~~~~~---~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+||..+||...+ .++|+. +..+.+.
T Consensus 132 ~SS~~vyg~~~~~~~~~~E~~----------------------------------------------------~~~p~s~ 159 (355)
T PRK10217 132 ISTDEVYGDLHSTDDFFTETT----------------------------------------------------PYAPSSP 159 (355)
T ss_pred ecchhhcCCCCCCCCCcCCCC----------------------------------------------------CCCCCCh
Confidence 999999985321 233321 1135678
Q ss_pred HHHHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhh
Q 037479 237 YVFTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddv 314 (492)
|+.||..+|+++..+ ..+++++++||+.|||+...+- .....++.....|....+++++++.+|++||+|+
T Consensus 160 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-------~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~ 232 (355)
T PRK10217 160 YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-------KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDH 232 (355)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-------cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHH
Confidence 999999999999876 4589999999999999986431 1233455555666555677899999999999999
Q ss_pred hhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 315 VNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 315 a~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
|++++.++... .. +++||++++ +++|+.++++.+.+.+++.
T Consensus 233 a~a~~~~~~~~--~~---~~~yni~~~--~~~s~~~~~~~i~~~~~~~ 273 (355)
T PRK10217 233 ARALYCVATTG--KV---GETYNIGGH--NERKNLDVVETICELLEEL 273 (355)
T ss_pred HHHHHHHHhcC--CC---CCeEEeCCC--CcccHHHHHHHHHHHhccc
Confidence 99999988642 22 679999999 8999999999999998864
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-31 Score=282.21 Aligned_cols=272 Identities=20% Similarity=0.217 Sum_probs=198.5
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
-..|.++|+|||||||||||++|+++|++. |+ +|++++|...... ++. ..
T Consensus 309 ~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~---~V~~l~r~~~~~~---~~~-----------------------~~ 359 (660)
T PRK08125 309 ACSAKRRTRVLILGVNGFIGNHLTERLLRDDNY---EVYGLDIGSDAIS---RFL-----------------------GH 359 (660)
T ss_pred hhhhhcCCEEEEECCCchHHHHHHHHHHhCCCc---EEEEEeCCchhhh---hhc-----------------------CC
Confidence 346778899999999999999999999985 55 4588888643211 100 01
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEee
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVS 161 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vS 161 (492)
++++++.||++++ .+..+.+++++|+|||+||.... .......+++|+.||.+++++|++. + ++|||+|
T Consensus 360 ~~~~~~~gDl~d~------~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~S 431 (660)
T PRK08125 360 PRFHFVEGDISIH------SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPS 431 (660)
T ss_pred CceEEEeccccCc------HHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEc
Confidence 4688999999942 23344667899999999997653 3345667899999999999999997 5 7999999
Q ss_pred eceeecccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 162 TAFVWGEES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 162 T~~v~~~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
|.++||... ..++|+...... .+ ...+.+.|+.|
T Consensus 432 S~~vyg~~~~~~~~E~~~~~~~-----~p----------------------------------------~~~p~s~Yg~s 466 (660)
T PRK08125 432 TSEVYGMCTDKYFDEDTSNLIV-----GP----------------------------------------INKQRWIYSVS 466 (660)
T ss_pred chhhcCCCCCCCcCcccccccc-----CC----------------------------------------CCCCccchHHH
Confidence 999998643 233443211000 00 01244689999
Q ss_pred HHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCcccc-CcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhH
Q 037479 241 KVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAE-GIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNA 317 (492)
Q Consensus 241 K~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ 317 (492)
|.++|+++..+ ..+++++++||++|||+........-. .......++..+..|....+.+++.+.+|+|||+|+|++
T Consensus 467 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a 546 (660)
T PRK08125 467 KQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEA 546 (660)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHH
Confidence 99999999887 358999999999999997643211100 112345566666667666677889999999999999999
Q ss_pred HHHHHHhhhcCCCCCCcEEEecCCCCC-cccHHHHHHHHHHHhhcCC
Q 037479 318 IVVAVVAHAKQPSDVNNIYQVGSSLRN-PLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 318 ii~~~~~~~~~~~~~~~iy~i~~~~~~-~~t~~e~~~~~~~~~~~~p 363 (492)
++.++.+...... +++||++++ . ++|++|+++.+.+.++..+
T Consensus 547 ~~~~l~~~~~~~~--g~iyni~~~--~~~~s~~el~~~i~~~~g~~~ 589 (660)
T PRK08125 547 LFRIIENKDNRCD--GQIINIGNP--DNEASIRELAEMLLASFEKHP 589 (660)
T ss_pred HHHHHhccccccC--CeEEEcCCC--CCceeHHHHHHHHHHHhccCc
Confidence 9999874321111 679999987 4 6999999999999998643
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-31 Score=268.15 Aligned_cols=253 Identities=15% Similarity=0.170 Sum_probs=187.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|||||||||||++|++.|++.|++ |+++.|...... +.+. . .....+++++
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~---V~~ld~~~~~~~--~~~~-------------~-------~~~~~~~~~i 172 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDS---VIVVDNFFTGRK--ENVM-------------H-------HFSNPNFELI 172 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCE---EEEEeCCCccch--hhhh-------------h-------hccCCceEEE
Confidence 5699999999999999999999999975 477776432211 1110 0 0012467888
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
.+|+.+ . ++.++|+|||+||.... ..+....+++|+.||.+++++|++. ++ +|||+||..||+
T Consensus 173 ~~D~~~-------~-----~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg 238 (442)
T PLN02206 173 RHDVVE-------P-----ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYG 238 (442)
T ss_pred ECCccC-------h-----hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhC
Confidence 999873 2 22579999999996542 2356678999999999999999997 54 799999999998
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
.... ...|+.+.+. .+..+.+.|+.||..+|+
T Consensus 239 ~~~~~p~~E~~~~~~-----------------------------------------------~P~~~~s~Y~~SK~~aE~ 271 (442)
T PLN02206 239 DPLQHPQVETYWGNV-----------------------------------------------NPIGVRSCYDEGKRTAET 271 (442)
T ss_pred CCCCCCCCccccccC-----------------------------------------------CCCCccchHHHHHHHHHH
Confidence 6432 2333322110 011345789999999999
Q ss_pred HHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 247 FIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 247 ~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
++..+ ..+++++++||+.|||+......+ ..+..++..+..+....+++++++.+|++||+|+|++++.+++.
T Consensus 272 ~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~-----~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~ 346 (442)
T PLN02206 272 LTMDYHRGANVEVRIARIFNTYGPRMCIDDG-----RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG 346 (442)
T ss_pred HHHHHHHHhCCCeEEEEeccccCCCCCcccc-----chHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhc
Confidence 99876 358999999999999987532111 22345666666666667788999999999999999999988863
Q ss_pred hhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 325 HAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
. . +++||++++ +++|+.|+++.+.+.++..
T Consensus 347 ~---~---~g~yNIgs~--~~~sl~Elae~i~~~~g~~ 376 (442)
T PLN02206 347 E---H---VGPFNLGNP--GEFTMLELAKVVQETIDPN 376 (442)
T ss_pred C---C---CceEEEcCC--CceeHHHHHHHHHHHhCCC
Confidence 2 1 468999998 8999999999999998753
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=260.76 Aligned_cols=258 Identities=17% Similarity=0.104 Sum_probs=187.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|||||||||||++|++.|++.|++ |.++.|........ ....+.++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~---V~~v~r~~~~~~~~---------------------------~~~~~~~~ 69 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHY---IIASDWKKNEHMSE---------------------------DMFCHEFH 69 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCE---EEEEEecccccccc---------------------------ccccceEE
Confidence 4689999999999999999999999975 58888864321000 00135678
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccC---cc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTN---FD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~---~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
.+|++ +.+....+++++|+|||+||.+. +. .........|+.++.+++++|++. ++++|||+||..+|
T Consensus 70 ~~Dl~-------d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vY 141 (370)
T PLN02695 70 LVDLR-------VMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIY 141 (370)
T ss_pred ECCCC-------CHHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhc
Confidence 89998 44545566789999999998653 11 233456788999999999999987 78999999999999
Q ss_pred cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 167 GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 167 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
+......++..+.+.+. .+..+.+.|+.+|..+|+
T Consensus 142 g~~~~~~~~~~~~E~~~---------------------------------------------~p~~p~s~Yg~sK~~~E~ 176 (370)
T PLN02695 142 PEFKQLETNVSLKESDA---------------------------------------------WPAEPQDAYGLEKLATEE 176 (370)
T ss_pred CCccccCcCCCcCcccC---------------------------------------------CCCCCCCHHHHHHHHHHH
Confidence 86432100111111000 011456899999999999
Q ss_pred HHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccC-ceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 247 FIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGK-GRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 247 ~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
++..+ ..+++++++||+.|||+......+ ....+..++..+.. +....+++++++.+++|||+|++++++.++.
T Consensus 177 ~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~ 253 (370)
T PLN02695 177 LCKHYTKDFGIECRIGRFHNIYGPFGTWKGG---REKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK 253 (370)
T ss_pred HHHHHHHHhCCCEEEEEECCccCCCCCcccc---ccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh
Confidence 99876 458999999999999986532100 01123345544433 2444667899999999999999999998765
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
.. . +++||++++ .++|++|+++.+.+..|..
T Consensus 254 ~~---~---~~~~nv~~~--~~~s~~el~~~i~~~~g~~ 284 (370)
T PLN02695 254 SD---F---REPVNIGSD--EMVSMNEMAEIALSFENKK 284 (370)
T ss_pred cc---C---CCceEecCC--CceeHHHHHHHHHHHhCCC
Confidence 32 1 568999998 8999999999999888864
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=256.26 Aligned_cols=256 Identities=20% Similarity=0.229 Sum_probs=182.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.++|+|||||||||||++|+++|+++|++ |.+++|+....... .+. + +. . ...++++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~~~-~~~-~---------~~--------~-~~~~~~~ 64 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYT---VKGTVRNPDDPKNT-HLR-E---------LE--------G-GKERLIL 64 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCchhhhHH-HHH-H---------hh--------C-CCCcEEE
Confidence 36789999999999999999999999974 58888865421110 000 0 00 0 0145888
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec-eeecc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA-FVWGE 168 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~-~v~~~ 168 (492)
+.+|++ +.+.+..+++++|+|||+||... ......+++|+.||.+++++|++. ++++|||+||. .+||.
T Consensus 65 ~~~Dl~-------d~~~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~ 134 (342)
T PLN02214 65 CKADLQ-------DYEALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMD 134 (342)
T ss_pred EecCcC-------ChHHHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeecc
Confidence 999999 55556677889999999999753 345778999999999999999987 78899999995 57864
Q ss_pred ccc----ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 169 ESG----MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 169 ~~~----~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
... .++|+.++. .+ .+..+.+.|+.||..+
T Consensus 135 ~~~~~~~~~~E~~~~~-----------~~-----------------------------------~~~~p~~~Y~~sK~~a 168 (342)
T PLN02214 135 PNRDPEAVVDESCWSD-----------LD-----------------------------------FCKNTKNWYCYGKMVA 168 (342)
T ss_pred CCCCCCcccCcccCCC-----------hh-----------------------------------hccccccHHHHHHHHH
Confidence 321 233432210 00 0113567899999999
Q ss_pred HHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHH
Q 037479 245 EMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAV 322 (492)
Q Consensus 245 E~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~ 322 (492)
|++++.+ ..+++++++||+.|||+...+. . ......+.....|.... . ++..+++|||+|||++++.++
T Consensus 169 E~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~--~----~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al 239 (342)
T PLN02214 169 EQAAWETAKEKGVDLVVLNPVLVLGPPLQPT--I----NASLYHVLKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVY 239 (342)
T ss_pred HHHHHHHHHHcCCcEEEEeCCceECCCCCCC--C----CchHHHHHHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHH
Confidence 9999887 3589999999999999976431 1 11111122333444322 2 345789999999999999998
Q ss_pred HhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 323 VAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 323 ~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
.... . ++.||+++. ++++.|+++.+.+.++.
T Consensus 240 ~~~~--~---~g~yn~~~~---~~~~~el~~~i~~~~~~ 270 (342)
T PLN02214 240 EAPS--A---SGRYLLAES---ARHRGEVVEILAKLFPE 270 (342)
T ss_pred hCcc--c---CCcEEEecC---CCCHHHHHHHHHHHCCC
Confidence 7421 1 458999763 67999999999998864
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=255.69 Aligned_cols=265 Identities=17% Similarity=0.191 Sum_probs=180.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|||||||||||++|+++|++.|+ +|++++|..........+. . .+ . ..++++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~-------------~-~~----~--~~~~~~ 63 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGY---AVNTTVRDPENQKKIAHLR-------------A-LQ----E--LGDLKI 63 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCC---EEEEEECCCCCHHHHHHHH-------------h-cC----C--CCceEE
Confidence 4589999999999999999999999996 4578888754321110000 0 00 0 135889
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD--ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
+.+|++ +.+....+++++|+|||+||...+. ++....+++|+.|+.+++++|++..++++|||+||+.+|+
T Consensus 64 ~~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g 136 (338)
T PLN00198 64 FGADLT-------DEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVS 136 (338)
T ss_pred EEcCCC-------ChHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeee
Confidence 999999 4454557778999999999976543 2334568999999999999998865688999999999997
Q ss_pred ccc-----cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 168 EES-----GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 168 ~~~-----~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
... ..++|+.++.. . .+. ....+.+.|+.||.
T Consensus 137 ~~~~~~~~~~~~E~~~~~~------------~--------------------~~~-----------~~~~p~~~Y~~sK~ 173 (338)
T PLN00198 137 INKLSGTGLVMNEKNWTDV------------E--------------------FLT-----------SEKPPTWGYPASKT 173 (338)
T ss_pred ccCCCCCCceeccccCCch------------h--------------------hhh-----------hcCCccchhHHHHH
Confidence 431 12344322100 0 000 01135678999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEec-CC----Ccccceeehhhhh
Q 037479 243 MGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG-DV----KGIVDVIPADMVV 315 (492)
Q Consensus 243 ~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~-~~----~~~~d~v~vddva 315 (492)
.+|++++.+ ..+++++++||+.|||+...+.. .....++..+..|....+.+ ++ +..+|+|||||+|
T Consensus 174 ~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a 247 (338)
T PLN00198 174 LAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDI------PSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVC 247 (338)
T ss_pred HHHHHHHHHHHhcCceEEEEeCCceECCCccCCC------CCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHH
Confidence 999999887 35899999999999999864311 11111222333333222222 11 2247999999999
Q ss_pred hHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 316 NAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 316 ~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
++++.++.... . ++.|+ +++ .++|+.++++.+.+.++.
T Consensus 248 ~a~~~~~~~~~--~---~~~~~-~~~--~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 248 RAHIFLAEKES--A---SGRYI-CCA--ANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred HHHHHHhhCcC--c---CCcEE-Eec--CCCCHHHHHHHHHHHCCC
Confidence 99999887421 1 34685 444 578999999999887754
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=255.00 Aligned_cols=258 Identities=19% Similarity=0.234 Sum_probs=182.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.|++|||||||||||++++++|++.|+ +|++++|+.......+.+. ...+ ...+++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~-------------~~~~------~~~~~~~~ 61 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY---TVKATVRDLTDRKKTEHLL-------------ALDG------AKERLKLF 61 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCCcchHHHHHHH-------------hccC------CCCceEEE
Confidence 478999999999999999999999997 4588888765422111110 0000 02468899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD--ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
.+|++ +.+....+++++|+|||+||..... ++....+++|+.||.+++++|++.+++++|||+||..++..
T Consensus 62 ~~Dl~-------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~ 134 (322)
T PLN02986 62 KADLL-------EESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLF 134 (322)
T ss_pred ecCCC-------CcchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheec
Confidence 99999 4444567788999999999976442 33445789999999999999998657899999999776432
Q ss_pred ccc------ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 169 ESG------MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 169 ~~~------~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
... .++|+.+. ++.. ...+.+.|+.||.
T Consensus 135 ~~~~~~~~~~~~E~~~~-----------~p~~-----------------------------------~~~~~~~Y~~sK~ 168 (322)
T PLN02986 135 RQPPIEANDVVDETFFS-----------DPSL-----------------------------------CRETKNWYPLSKI 168 (322)
T ss_pred CCccCCCCCCcCcccCC-----------ChHH-----------------------------------hhccccchHHHHH
Confidence 111 12222111 1100 0024578999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHH
Q 037479 243 MGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 243 ~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
.+|++++++ ..+++++++||+.|||+...|..+ ....++..+..|.. .. +...+++|+|+|+|++++.
T Consensus 169 ~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~------~~~~~~~~~~~g~~--~~--~~~~~~~v~v~Dva~a~~~ 238 (322)
T PLN02986 169 LAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLN------FSVELIVDFINGKN--LF--NNRFYRFVDVRDVALAHIK 238 (322)
T ss_pred HHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCC------ccHHHHHHHHcCCC--CC--CCcCcceeEHHHHHHHHHH
Confidence 999999887 358999999999999998654211 11234444444442 12 2456799999999999999
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
++... . . +++||++ + .++|+.++++.+.+.++.
T Consensus 239 al~~~-~-~---~~~yni~-~--~~~s~~e~~~~i~~~~~~ 271 (322)
T PLN02986 239 ALETP-S-A---NGRYIID-G--PIMSVNDIIDILRELFPD 271 (322)
T ss_pred HhcCc-c-c---CCcEEEe-c--CCCCHHHHHHHHHHHCCC
Confidence 98743 2 1 4589995 4 579999999999999874
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=251.56 Aligned_cols=259 Identities=16% Similarity=0.182 Sum_probs=179.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|||||||||||++|+++|++.|++ |.+++|+.........+. ... ....+++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~-------------~~~------~~~~~~~~~ 60 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYT---VKATVRDPNDPKKTEHLL-------------ALD------GAKERLHLF 60 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCE---EEEEEcCCCchhhHHHHH-------------hcc------CCCCceEEE
Confidence 4689999999999999999999999974 578888754321111110 000 002468899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee--e
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD--ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV--W 166 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v--~ 166 (492)
.+|+++ .+....+++++|+|||+|+..... .+....+++|+.||.+++++|++..++++|||+||+.+ |
T Consensus 61 ~~Dl~~-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y 133 (322)
T PLN02662 61 KANLLE-------EGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAY 133 (322)
T ss_pred eccccC-------cchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcC
Confidence 999994 444557788999999999976432 23347889999999999999988657889999999763 5
Q ss_pred cccc----cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 167 GEES----GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 167 ~~~~----~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
+... ..++|+.. ..+.. .....+.|+.||.
T Consensus 134 ~~~~~~~~~~~~E~~~-----------~~p~~-----------------------------------~~~~~~~Y~~sK~ 167 (322)
T PLN02662 134 NGKPLTPDVVVDETWF-----------SDPAF-----------------------------------CEESKLWYVLSKT 167 (322)
T ss_pred CCcCCCCCCcCCcccC-----------CChhH-----------------------------------hhcccchHHHHHH
Confidence 4311 11222211 10000 0023468999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHH
Q 037479 243 MGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 243 ~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
++|++++.+ ..+++++++||+.|||+...+.. ......+..+..|.. ..+...+|+|||+|+|++++.
T Consensus 168 ~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~i~v~Dva~a~~~ 237 (322)
T PLN02662 168 LAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTL------NTSAEAILNLINGAQ----TFPNASYRWVDVRDVANAHIQ 237 (322)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCC------CchHHHHHHHhcCCc----cCCCCCcCeEEHHHHHHHHHH
Confidence 999999876 35899999999999999765421 112233333433432 123457899999999999999
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
++... .. ++.||++ + .++|++|+++.+.+.++..
T Consensus 238 ~~~~~-~~----~~~~~~~-g--~~~s~~e~~~~i~~~~~~~ 271 (322)
T PLN02662 238 AFEIP-SA----SGRYCLV-E--RVVHYSEVVKILHELYPTL 271 (322)
T ss_pred HhcCc-Cc----CCcEEEe-C--CCCCHHHHHHHHHHHCCCC
Confidence 98742 11 3478886 4 5799999999999987643
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=252.84 Aligned_cols=261 Identities=16% Similarity=0.191 Sum_probs=189.3
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
|+++|+|||||||||||+++++.|++.|++ |+++.|.........+. +. ...++.
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~------------~~----------~~~~~~ 55 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLELGAE---VYGYSLDPPTSPNLFEL------------LN----------LAKKIE 55 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHCCCE---EEEEeCCCccchhHHHH------------Hh----------hcCCce
Confidence 678999999999999999999999999964 57888865432211100 00 014577
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA 163 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~ 163 (492)
++.+|++ +.+....+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++.+.+++||++||+
T Consensus 56 ~~~~Dl~-------~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~ 128 (349)
T TIGR02622 56 DHFGDIR-------DAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSD 128 (349)
T ss_pred EEEccCC-------CHHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEech
Confidence 8999999 4444556666 479999999964332 345678899999999999999887337899999999
Q ss_pred eeeccccc--ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHH
Q 037479 164 FVWGEESG--MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241 (492)
Q Consensus 164 ~v~~~~~~--~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK 241 (492)
.+|+.... .+.|.. +..+.+.|+.||
T Consensus 129 ~vyg~~~~~~~~~e~~----------------------------------------------------~~~p~~~Y~~sK 156 (349)
T TIGR02622 129 KCYRNDEWVWGYRETD----------------------------------------------------PLGGHDPYSSSK 156 (349)
T ss_pred hhhCCCCCCCCCccCC----------------------------------------------------CCCCCCcchhHH
Confidence 99975321 112211 114567899999
Q ss_pred HHHHHHHHHhc---------CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehh
Q 037479 242 VMGEMFIEHLK---------ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPAD 312 (492)
Q Consensus 242 ~~aE~~v~~~~---------~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vd 312 (492)
..+|.+++.+. ++++++++||+.|||+.... . -...+.++..+..|.... .+++++.+|+||||
T Consensus 157 ~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~-----~~~~~~~~~~~~~g~~~~-~~~g~~~rd~i~v~ 229 (349)
T TIGR02622 157 ACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA-E-----DRLIPDVIRAFSSNKIVI-IRNPDATRPWQHVL 229 (349)
T ss_pred HHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch-h-----hhhhHHHHHHHhcCCCeE-ECCCCcccceeeHH
Confidence 99999997652 38999999999999986421 1 023345566666665543 46788999999999
Q ss_pred hhhhHHHHHHHhhhcCC-CCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 313 MVVNAIVVAVVAHAKQP-SDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 313 dva~~ii~~~~~~~~~~-~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
|+|++++.++.+....+ .. +++||++++...+++..++++.+.+.++.
T Consensus 230 D~a~a~~~~~~~~~~~~~~~-~~~yni~s~~~~~~s~~~~~~~i~~~~~~ 278 (349)
T TIGR02622 230 EPLSGYLLLAEKLFTGQAEF-AGAWNFGPRASDNARVVELVVDALEFWWG 278 (349)
T ss_pred HHHHHHHHHHHHHhhcCccc-cceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence 99999998886432111 11 57999998533689999999999887664
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-30 Score=234.23 Aligned_cols=260 Identities=21% Similarity=0.288 Sum_probs=199.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+..++++||||.||+|++.+..+.+.-++.+.|.+. .-.-... ++-+. ++. ...+-.+
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~id-kL~~~s~-~~~l~-~~~-------------------n~p~ykf 61 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLD-KLDYCSN-LKNLE-PVR-------------------NSPNYKF 61 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEe-ecccccc-cchhh-hhc-------------------cCCCceE
Confidence 445899999999999999999999988776543332 2110000 11111 111 1367789
Q ss_pred EecCCCCCCCCCCchhhHHHhc--cCccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 90 VPGDITREDLGVKDSNLREEMW--NKLDVVINLAATTNFDE---RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~--~~vd~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
+++|+.+ +.....++ +++|.|+|.||..+.+. +.-...+.|+.+|..|++.++..+++++|||+||..
T Consensus 62 v~~di~~-------~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTde 134 (331)
T KOG0747|consen 62 VEGDIAD-------ADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDE 134 (331)
T ss_pred eeccccc-------hHHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccc
Confidence 9999994 43333333 48999999999876542 334568889999999999999998999999999999
Q ss_pred eecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 165 VWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 165 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
|||+..+. ..+. ..++.+|.|+|+.||+.|
T Consensus 135 VYGds~~~----~~~~----------------------------------------------E~s~~nPtnpyAasKaAa 164 (331)
T KOG0747|consen 135 VYGDSDED----AVVG----------------------------------------------EASLLNPTNPYAASKAAA 164 (331)
T ss_pred eecCcccc----cccc----------------------------------------------ccccCCCCCchHHHHHHH
Confidence 99987531 1110 012337899999999999
Q ss_pred HHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHH
Q 037479 245 EMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAV 322 (492)
Q Consensus 245 E~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~ 322 (492)
|++++++ .-++|++++|-++||||.+-|. ..++.++.....|...++.|++...++++||+|+++++-+++
T Consensus 165 E~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-------klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~ 237 (331)
T KOG0747|consen 165 EMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-------KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVL 237 (331)
T ss_pred HHHHHHHhhccCCcEEEEeccCccCCCcChH-------HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHH
Confidence 9999998 4589999999999999998652 445567766666777789999999999999999999999988
Q ss_pred HhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 323 VAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 323 ~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
.+ .. . |+|||+++. .+.+..|+++.+.+.+.+.
T Consensus 238 ~K-g~-~---geIYNIgtd--~e~~~~~l~k~i~eli~~~ 270 (331)
T KOG0747|consen 238 EK-GE-L---GEIYNIGTD--DEMRVIDLAKDICELFEKR 270 (331)
T ss_pred hc-CC-c---cceeeccCc--chhhHHHHHHHHHHHHHHh
Confidence 75 22 2 899999998 8999999999999988864
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=244.77 Aligned_cols=261 Identities=20% Similarity=0.267 Sum_probs=200.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC-CcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD-AKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~-~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++.+++||||+||||.+|+++|++.+. ...|+++..... .....+.. .+...++..
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~~~~~~~e~~----------------------~~~~~~v~~ 59 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPTQSNLPAELT----------------------GFRSGRVTV 59 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCccccccchhhh----------------------cccCCceeE
Confidence 467999999999999999999999885 346666665443 11111100 011478899
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc--ch-hHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF--DE-RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~--~~-~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+.+|+. +...+..++.++ .|+||||.... .. ..+...++||.||++++++|++. +++++||+||++|.
T Consensus 60 ~~~D~~-------~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vv 130 (361)
T KOG1430|consen 60 ILGDLL-------DANSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVV 130 (361)
T ss_pred Eecchh-------hhhhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEE
Confidence 999999 555566888899 88888886543 23 47888999999999999999999 99999999999998
Q ss_pred cccccce-eccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEESGML-YESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~~~i-~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
......+ .++..| .+..+.+.|+.||+.||
T Consensus 131 f~g~~~~n~~E~~p-------------------------------------------------~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 131 FGGEPIINGDESLP-------------------------------------------------YPLKHIDPYGESKALAE 161 (361)
T ss_pred eCCeecccCCCCCC-------------------------------------------------CccccccccchHHHHHH
Confidence 7654211 111111 01256789999999999
Q ss_pred HHHHHhc--CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 246 MFIEHLK--ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 246 ~~v~~~~--~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
+++.+.. .++.++++||++|||+++. ...+.++..+..|......++++...|+++++.||-+++.|..
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~---------~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~ 232 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGIYGPGDK---------RLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAAR 232 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccccCCCCc---------cccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHH
Confidence 9999884 4699999999999999984 3445667777788888888999999999999999999999887
Q ss_pred hhh-cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 324 AHA-KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 324 ~~~-~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
... ..+...|++|+|+++ +|+...+++..+.+.+|..+
T Consensus 233 aL~~~~~~~~Gq~yfI~d~--~p~~~~~~~~~l~~~lg~~~ 271 (361)
T KOG1430|consen 233 ALLDKSPSVNGQFYFITDD--TPVRFFDFLSPLVKALGYCL 271 (361)
T ss_pred HHHhcCCccCceEEEEeCC--CcchhhHHHHHHHHhcCCCC
Confidence 533 222222899999999 89888888889999988765
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=255.76 Aligned_cols=278 Identities=24% Similarity=0.347 Sum_probs=195.7
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+|||||||||||++|+++|++.|+. .+|++++|+.......+|+.+.+-.... .. ......+++++.||
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~~---------~~-~~~~~~~v~~~~~D 69 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYRL---------WQ-EDLARERIEVVAGD 69 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhCC---------CC-chhhhCCEEEEeCC
Confidence 5899999999999999999998853 3789999987655555565421110000 00 00001579999999
Q ss_pred CCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccccc-
Q 037479 94 ITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM- 172 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~- 172 (492)
++++.+|+++.+.. .+.+++|+|||+||.+++..++....++|+.|+.+++++|.+. ++++|||+||..+++.....
T Consensus 70 ~~~~~~gl~~~~~~-~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~~ 147 (367)
T TIGR01746 70 LSEPRLGLSDAEWE-RLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLST 147 (367)
T ss_pred cCcccCCcCHHHHH-HHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCCC
Confidence 99999999766654 6778999999999998877778888899999999999999987 67889999999998764211
Q ss_pred eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-
Q 037479 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL- 251 (492)
Q Consensus 173 i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 251 (492)
+.|..... .....+.+.|+.||+.+|+++.+.
T Consensus 148 ~~~~~~~~-----------------------------------------------~~~~~~~~~Y~~sK~~~E~~~~~~~ 180 (367)
T TIGR01746 148 VTEDDAIV-----------------------------------------------TPPPGLAGGYAQSKWVAELLVREAS 180 (367)
T ss_pred cccccccc-----------------------------------------------ccccccCCChHHHHHHHHHHHHHHH
Confidence 11110000 000134578999999999999876
Q ss_pred cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc-CceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCC
Q 037479 252 KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG-KGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPS 330 (492)
Q Consensus 252 ~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~ 330 (492)
..+++++++||+.|+|+... |..........++.... .| ..+.......+++||||+|++++.++........
T Consensus 181 ~~g~~~~i~Rpg~v~G~~~~---g~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~ 254 (367)
T TIGR01746 181 DRGLPVTIVRPGRILGNSYT---GAINSSDILWRMVKGCLALG---AYPDSPELTEDLTPVDYVARAIVALSSQPAASAG 254 (367)
T ss_pred hcCCCEEEECCCceeecCCC---CCCCchhHHHHHHHHHHHhC---CCCCCCccccCcccHHHHHHHHHHHHhCCCcccC
Confidence 34899999999999997432 21111111222222221 12 2222223467899999999999988864321111
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 331 DVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 331 ~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+++||++++ .++++.++++.+.+ .|..
T Consensus 255 --~~~~~v~~~--~~~s~~e~~~~i~~-~g~~ 281 (367)
T TIGR01746 255 --GPVFHVVNP--EPVSLDEFLEWLER-AGYN 281 (367)
T ss_pred --CceEEecCC--CCCCHHHHHHHHHH-cCCC
Confidence 579999998 89999999999988 6653
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-30 Score=251.59 Aligned_cols=245 Identities=16% Similarity=0.186 Sum_probs=171.1
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|||||||||||++|+++|++.|+++ ++++|........ . ..+.+|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~---v~~~~~~~~~~~~---~----------------------------~~~~~~~ 47 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTKF---V----------------------------NLVDLDI 47 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCce---EEEecCCCcchHH---H----------------------------hhhhhhh
Confidence 7999999999999999999998643 5666654321100 0 0112333
Q ss_pred CCCCCCCCchhhHHHhc-----cCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 95 TREDLGVKDSNLREEMW-----NKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~-----~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
.+.. +.++..+.++ .++|+|||+||..... ......+++|+.||.+++++|++. ++ +|||+||+++||.
T Consensus 48 ~d~~---~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~ 122 (308)
T PRK11150 48 ADYM---DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGG 122 (308)
T ss_pred hhhh---hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCc
Confidence 3210 0112222332 2699999999854322 233457899999999999999997 56 6999999999986
Q ss_pred ccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 169 ESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 169 ~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
..+ .++|+.. ..+.+.|+.||..+|++
T Consensus 123 ~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~~E~~ 150 (308)
T PRK11150 123 RTDDFIEEREY----------------------------------------------------EKPLNVYGYSKFLFDEY 150 (308)
T ss_pred CCCCCCccCCC----------------------------------------------------CCCCCHHHHHHHHHHHH
Confidence 432 2333221 14568899999999999
Q ss_pred HHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEE-ecCCCcccceeehhhhhhHHHHHHHh
Q 037479 248 IEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF-LGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 248 v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
++++ ..+++++++||+.|||++..+ .+.+. .....++..+..|....+ .++++..+|++||||+|++++.++..
T Consensus 151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~-~~~~~--~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~ 227 (308)
T PRK11150 151 VRQILPEANSQICGFRYFNVYGPREGH-KGSMA--SVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN 227 (308)
T ss_pred HHHHHHHcCCCEEEEeeeeecCCCCCC-CCccc--hhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc
Confidence 9887 458999999999999987643 11111 111223344555654333 36677889999999999999988763
Q ss_pred hhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 325 HAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
. . +++||++++ .++|+.|+++.+.+.++.
T Consensus 228 ~---~---~~~yni~~~--~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 228 G---V---SGIFNCGTG--RAESFQAVADAVLAYHKK 256 (308)
T ss_pred C---C---CCeEEcCCC--CceeHHHHHHHHHHHhCC
Confidence 2 1 569999998 889999999999999874
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=253.41 Aligned_cols=260 Identities=19% Similarity=0.215 Sum_probs=187.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|+ +|+++.|+..... .+++. .+ ..+.+ .....+++++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~-~~~~~-~~---------~~~~~----~~~~~~~~~~~~ 62 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY---EVHGLIRRSSSFN-TQRIE-HI---------YEDPH----NVNKARMKLHYG 62 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC---EEEEEecCCcccc-hhhhh-hh---------hhccc----cccccceeEEEe
Confidence 6899999999999999999999996 4588888754211 11111 00 00000 000146889999
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccc---eeEEEeeece
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKL---IVLVHVSTAF 164 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~---~~~V~vST~~ 164 (492)
|++ +.+.+..+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++ ++|||+||..
T Consensus 63 Dl~-------d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~ 134 (343)
T TIGR01472 63 DLT-------DSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSE 134 (343)
T ss_pred ccC-------CHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHH
Confidence 999 5555656666 479999999976432 334567788999999999999986 44 4899999999
Q ss_pred eeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 165 VWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 165 v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
+||.... .++|+. +..+.+.|+.||..
T Consensus 135 vyg~~~~~~~~E~~----------------------------------------------------~~~p~~~Y~~sK~~ 162 (343)
T TIGR01472 135 LYGKVQEIPQNETT----------------------------------------------------PFYPRSPYAAAKLY 162 (343)
T ss_pred hhCCCCCCCCCCCC----------------------------------------------------CCCCCChhHHHHHH
Confidence 9986431 122221 11456899999999
Q ss_pred HHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCce-eeEEecCCCcccceeehhhhhhHHHH
Q 037479 244 GEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGR-LTCFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 244 aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
+|.++..+ ..++++++.|+..++|+.... ..+. ..+..++..+..|. .....+++++.+|+|||+|+|++++.
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~ 238 (343)
T TIGR01472 163 AHWITVNYREAYGLFAVNGILFNHESPRRGE--NFVT--RKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWL 238 (343)
T ss_pred HHHHHHHHHHHhCCceEEEeecccCCCCCCc--cccc--hHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHH
Confidence 99999877 347999999999999986421 1111 22334444455554 23456889999999999999999999
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
++.+. . .++||++++ .++|+.|+++.+.+.+|+.
T Consensus 239 ~~~~~-~-----~~~yni~~g--~~~s~~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 239 MLQQD-K-----PDDYVIATG--ETHSVREFVEVSFEYIGKT 272 (343)
T ss_pred HHhcC-C-----CccEEecCC--CceeHHHHHHHHHHHcCCC
Confidence 88632 1 458999999 8999999999999998854
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-29 Score=251.23 Aligned_cols=262 Identities=17% Similarity=0.251 Sum_probs=186.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|.++ |+++.|...... .+.+. .+ .+ ..+++++.+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~--v~~~~~~~~~~~-~~~~~-~~------------~~-------~~~~~~~~~ 57 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDS--VVNVDKLTYAGN-LESLA-DV------------SD-------SERYVFEHA 57 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCe--EEEecCCCccch-HHHHH-hc------------cc-------CCceEEEEe
Confidence 589999999999999999999998642 344333221111 11111 00 00 145788999
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhc--------ccceeEEE
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKC--------AKLIVLVH 159 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~~~~~~V~ 159 (492)
|++ +.+....+++ ++|+|||+||..... ......+++|+.||.+++++|++. +++++|||
T Consensus 58 Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~ 130 (352)
T PRK10084 58 DIC-------DRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHH 130 (352)
T ss_pred cCC-------CHHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEE
Confidence 999 5555556665 589999999976432 345778999999999999999874 24678999
Q ss_pred eeeceeeccccc--ce-eccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 160 VSTAFVWGEESG--ML-YESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 160 vST~~v~~~~~~--~i-~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+||.++|+.... .+ ++...++ +.+ ..+..+.+.
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~~~~---~~E-----------------------------------------~~~~~p~~~ 166 (352)
T PRK10084 131 ISTDEVYGDLPHPDEVENSEELPL---FTE-----------------------------------------TTAYAPSSP 166 (352)
T ss_pred ecchhhcCCCCccccccccccCCC---ccc-----------------------------------------cCCCCCCCh
Confidence 999999986321 00 0001110 000 012256789
Q ss_pred HHHHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhh
Q 037479 237 YVFTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddv 314 (492)
|+.||+.+|+++..+ ..+++++++||+.|||+...+ . .....++..+..|....+++++++.+|+|||+|+
T Consensus 167 Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~-~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~ 239 (352)
T PRK10084 167 YSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP-E------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (352)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc-c------chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence 999999999999876 358999999999999997532 1 1233445555555555677889999999999999
Q ss_pred hhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 315 VNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 315 a~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
|++++.++... .. +++||++++ +++|+.++++.+.+.+++.
T Consensus 240 a~a~~~~l~~~--~~---~~~yni~~~--~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 240 ARALYKVVTEG--KA---GETYNIGGH--NEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred HHHHHHHHhcC--CC---CceEEeCCC--CcCcHHHHHHHHHHHhccc
Confidence 99999888632 12 689999998 8899999999999998863
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=248.20 Aligned_cols=258 Identities=17% Similarity=0.205 Sum_probs=181.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+|+||||||+||||++|+++|++.|++ |++++|+.........+. ...+ ...++.++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~-------------~~~~------~~~~~~~~ 61 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYT---INATVRDPKDRKKTDHLL-------------ALDG------AKERLKLF 61 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEEcCCcchhhHHHHH-------------hccC------CCCceEEE
Confidence 4789999999999999999999999974 577777654321111100 0000 01468899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
.+|++ +.+..+.+++++|+|||+||..... +.+...+++|+.|+.+++++|.+..+.++||++||..+++
T Consensus 62 ~~D~~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~ 134 (325)
T PLN02989 62 KADLL-------DEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVL 134 (325)
T ss_pred eCCCC-------CchHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhee
Confidence 99999 4445567788999999999975432 3456788999999999999998854578999999987765
Q ss_pred ccc------cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHH
Q 037479 168 EES------GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241 (492)
Q Consensus 168 ~~~------~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK 241 (492)
... ..++|+. +..+.. ...+.+.|+.||
T Consensus 135 ~~~~~~~~~~~~~E~~-----------~~~p~~-----------------------------------~~~~~~~Y~~sK 168 (325)
T PLN02989 135 APETKLGPNDVVDETF-----------FTNPSF-----------------------------------AEERKQWYVLSK 168 (325)
T ss_pred cCCccCCCCCccCcCC-----------CCchhH-----------------------------------hcccccchHHHH
Confidence 421 1123321 111100 002347899999
Q ss_pred HHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHH
Q 037479 242 VMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 242 ~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii 319 (492)
..+|++++.+ ..+++++++||+.|||+...+..+ ....++..+..|... .+ ...++++||+|+|++++
T Consensus 169 ~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~------~~~~~i~~~~~~~~~--~~--~~~r~~i~v~Dva~a~~ 238 (325)
T PLN02989 169 TLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLN------FSVAVIVELMKGKNP--FN--TTHHRFVDVRDVALAHV 238 (325)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCC------chHHHHHHHHcCCCC--CC--CcCcCeeEHHHHHHHHH
Confidence 9999999876 358999999999999998754221 222344444444432 12 34579999999999999
Q ss_pred HHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
.++.... . +++||++ + .++|++|+++.+.+.++.
T Consensus 239 ~~l~~~~--~---~~~~ni~-~--~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 239 KALETPS--A---NGRYIID-G--PVVTIKDIENVLREFFPD 272 (325)
T ss_pred HHhcCcc--c---CceEEEe-c--CCCCHHHHHHHHHHHCCC
Confidence 9987422 1 4589995 4 579999999999999874
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-29 Score=246.01 Aligned_cols=255 Identities=21% Similarity=0.303 Sum_probs=188.5
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+|||||||||||++++++|++.|++. +|+++.|...... .+++. ++ . ...+++++.+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~-~v~~~~~~~~~~~-~~~~~-~~---------~----------~~~~~~~~~~D 58 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDA-EVIVLDKLTYAGN-LENLA-DL---------E----------DNPRYRFVKGD 58 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCC-EEEEecCCCcchh-hhhhh-hh---------c----------cCCCcEEEEcC
Confidence 58999999999999999999987443 5677766422111 11111 00 0 01467889999
Q ss_pred CCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 94 ITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
++ +.+.+..++++ +|+|||+||....+ +....++++|+.|+.+++++|++...-.++||+||..++|.
T Consensus 59 l~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~ 131 (317)
T TIGR01181 59 IG-------DRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGD 131 (317)
T ss_pred Cc-------CHHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCC
Confidence 99 55555577776 99999999976543 34567899999999999999988622237999999999986
Q ss_pred ccc--ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 169 ESG--MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 169 ~~~--~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
... .+.|.. +..+.+.|+.+|+.+|+
T Consensus 132 ~~~~~~~~e~~----------------------------------------------------~~~~~~~Y~~sK~~~e~ 159 (317)
T TIGR01181 132 LEKGDAFTETT----------------------------------------------------PLAPSSPYSASKAASDH 159 (317)
T ss_pred CCCCCCcCCCC----------------------------------------------------CCCCCCchHHHHHHHHH
Confidence 431 122221 11345789999999999
Q ss_pred HHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 247 FIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 247 ~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
+++.+ ..+++++++||+.|||+...+. .....++..+..|....++++++..+++||+||+|+++..++.+
T Consensus 160 ~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~ 232 (317)
T TIGR01181 160 LVRAYHRTYGLPALITRCSNNYGPYQFPE-------KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEK 232 (317)
T ss_pred HHHHHHHHhCCCeEEEEeccccCCCCCcc-------cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcC
Confidence 99876 4589999999999999875321 22345556666665556678888899999999999999988863
Q ss_pred hhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 325 HAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. .. +++||++++ .++|+.|+++.+.+.++..+
T Consensus 233 ~--~~---~~~~~~~~~--~~~s~~~~~~~i~~~~~~~~ 264 (317)
T TIGR01181 233 G--RV---GETYNIGGG--NERTNLEVVETILELLGKDE 264 (317)
T ss_pred C--CC---CceEEeCCC--CceeHHHHHHHHHHHhCCCc
Confidence 2 22 679999998 88999999999999998643
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-29 Score=245.21 Aligned_cols=229 Identities=20% Similarity=0.180 Sum_probs=168.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+||||||+||||++|+++|++.| + |+++.|.. ..+.+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~---V~~~~~~~--------------------------------------~~~~~ 38 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-N---LIALDVHS--------------------------------------TDYCG 38 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-C---EEEecccc--------------------------------------ccccC
Confidence 589999999999999999999987 4 46676631 12468
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+.+..+++ ++|+||||||....+ ..+..++++|+.|+.+++++|++. +. +|||+||.+||+
T Consensus 39 Dl~-------d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~ 109 (299)
T PRK09987 39 DFS-------NPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFP 109 (299)
T ss_pred CCC-------CHHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEEC
Confidence 998 5555556666 589999999987543 345677899999999999999997 54 799999999998
Q ss_pred ccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 168 EESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 168 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
...+ .++++.+ +..|.|.|+.||..+|++
T Consensus 110 ~~~~----~p~~E~~-----------------------------------------------~~~P~~~Yg~sK~~~E~~ 138 (299)
T PRK09987 110 GTGD----IPWQETD-----------------------------------------------ATAPLNVYGETKLAGEKA 138 (299)
T ss_pred CCCC----CCcCCCC-----------------------------------------------CCCCCCHHHHHHHHHHHH
Confidence 6432 1222211 114678999999999999
Q ss_pred HHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC--CCcccceeehhhhhhHHHHHHHhh
Q 037479 248 IEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD--VKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 248 v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
+..+. .+.+|+||++|||+... .....++..+..|....+.++ +....+...+||++.++..++...
T Consensus 139 ~~~~~--~~~~ilR~~~vyGp~~~---------~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~ 207 (299)
T PRK09987 139 LQEHC--AKHLIFRTSWVYAGKGN---------NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKP 207 (299)
T ss_pred HHHhC--CCEEEEecceecCCCCC---------CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccC
Confidence 98863 36799999999998642 123344545555555566666 455555566777888877766421
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
.. .++||++++ .++|+.|+++.+.+.++.
T Consensus 208 --~~---~giyni~~~--~~~s~~e~~~~i~~~~~~ 236 (299)
T PRK09987 208 --EV---AGLYHLVAS--GTTTWHDYAALVFEEARK 236 (299)
T ss_pred --CC---CCeEEeeCC--CCccHHHHHHHHHHHHHh
Confidence 11 469999998 889999999999876543
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-29 Score=250.47 Aligned_cols=263 Identities=15% Similarity=0.157 Sum_probs=175.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+++|||||||||||++|+++|++.|+ +|++++|+.........+. . .+ ....++.++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~-------------~-~~-----~~~~~~~~v 61 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGY---TVRATVRDPANVKKVKHLL-------------D-LP-----GATTRLTLW 61 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCC---EEEEEEcCcchhHHHHHHH-------------h-cc-----CCCCceEEE
Confidence 368999999999999999999999996 4588888643321111100 0 00 001357889
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD--ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
.+|++ +.+....+++++|+|||+|+..... ++....+++|+.||.+++++|++.+++++|||+||+.+++.
T Consensus 62 ~~Dl~-------d~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~ 134 (351)
T PLN02650 62 KADLA-------VEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNV 134 (351)
T ss_pred EecCC-------ChhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhccc
Confidence 99999 4444557778999999999976432 23346789999999999999998744789999999877654
Q ss_pred ccc---ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 169 ESG---MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 169 ~~~---~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
..+ .++|+.... .+... .+..+.+.|+.||..+|
T Consensus 135 ~~~~~~~~~E~~~~~---------~~~~~----------------------------------~~~~~~~~Y~~sK~~~E 171 (351)
T PLN02650 135 EEHQKPVYDEDCWSD---------LDFCR----------------------------------RKKMTGWMYFVSKTLAE 171 (351)
T ss_pred CCCCCCccCcccCCc---------hhhhh----------------------------------ccccccchHHHHHHHHH
Confidence 221 123332110 00000 00123468999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
++++.+ ..+++++++||++|||+...+.. . ......+ ....|... ..+. ...+|+|||+|+|++++.++.
T Consensus 172 ~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~---~--~~~~~~~-~~~~~~~~-~~~~-~~~r~~v~V~Dva~a~~~~l~ 243 (351)
T PLN02650 172 KAAWKYAAENGLDFISIIPTLVVGPFISTSM---P--PSLITAL-SLITGNEA-HYSI-IKQGQFVHLDDLCNAHIFLFE 243 (351)
T ss_pred HHHHHHHHHcCCeEEEECCCceECCCCCCCC---C--ccHHHHH-HHhcCCcc-ccCc-CCCcceeeHHHHHHHHHHHhc
Confidence 999887 45899999999999999764310 0 1111111 11122211 1121 234799999999999999987
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
... . +++|+ +++ .++|+.|+++.+.+.++.
T Consensus 244 ~~~--~---~~~~i-~~~--~~~s~~el~~~i~~~~~~ 273 (351)
T PLN02650 244 HPA--A---EGRYI-CSS--HDATIHDLAKMLREKYPE 273 (351)
T ss_pred CcC--c---CceEE-ecC--CCcCHHHHHHHHHHhCcc
Confidence 421 1 44784 555 679999999999997764
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-29 Score=245.02 Aligned_cols=250 Identities=23% Similarity=0.263 Sum_probs=190.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|++| +++.|........ ...+..+.+
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V---~~~~r~~~~~~~~----------------------------~~~~~~~~~ 49 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDV---RGLDRLRDGLDPL----------------------------LSGVEFVVL 49 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeE---EEEeCCCcccccc----------------------------ccccceeee
Confidence 359999999999999999999999755 8888876543210 035678899
Q ss_pred CCCCCCCCCCchhhHHHhccCc-cEEEEcccccCcchh----HHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWNKL-DVVINLAATTNFDER----YDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~v-d~Vih~Aa~~~~~~~----~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|+++ .+....+.+.+ |+|||+||....... +....++|+.||.+++++|++. ++++|||.||.++++
T Consensus 50 d~~~-------~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~~~~ 121 (314)
T COG0451 50 DLTD-------RDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVY 121 (314)
T ss_pred cccc-------hHHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCceEC
Confidence 9984 34455666777 999999998865433 3458999999999999999995 899999999888777
Q ss_pred cc-c-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 168 EE-S-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 168 ~~-~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
.. . ..++|+. . +..+.+.|+.||..+|
T Consensus 122 ~~~~~~~~~E~~-~--------------------------------------------------~~~p~~~Yg~sK~~~E 150 (314)
T COG0451 122 GDPPPLPIDEDL-G--------------------------------------------------PPRPLNPYGVSKLAAE 150 (314)
T ss_pred CCCCCCCccccc-C--------------------------------------------------CCCCCCHHHHHHHHHH
Confidence 54 1 1334432 1 1134458999999999
Q ss_pred HHHHHhc--CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee-eEEecCCCcccceeehhhhhhHHHHHH
Q 037479 246 MFIEHLK--ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL-TCFLGDVKGIVDVIPADMVVNAIVVAV 322 (492)
Q Consensus 246 ~~v~~~~--~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~v~vddva~~ii~~~ 322 (492)
+++.++. .+++++++||+.|||+...+. + .. .....++.....|.. ....+++...++++++||++.+++.++
T Consensus 151 ~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 226 (314)
T COG0451 151 QLLRAYARLYGLPVVILRPFNVYGPGDKPD--L-SS-GVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL 226 (314)
T ss_pred HHHHHHHHHhCCCeEEEeeeeeeCCCCCCC--C-Cc-CcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHH
Confidence 9999884 589999999999999998653 1 11 123334444555553 566678888899999999999999999
Q ss_pred HhhhcCCCCCCcEEEecCCCCC-cccHHHHHHHHHHHhhcCCC
Q 037479 323 VAHAKQPSDVNNIYQVGSSLRN-PLIYTNLQDYAYRYFTKKPW 364 (492)
Q Consensus 323 ~~~~~~~~~~~~iy~i~~~~~~-~~t~~e~~~~~~~~~~~~p~ 364 (492)
++... . +||++++ . +++.+++.+.+.+.++..+.
T Consensus 227 ~~~~~-----~-~~ni~~~--~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 227 ENPDG-----G-VFNIGSG--TAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred hCCCC-----c-EEEeCCC--CCcEEHHHHHHHHHHHhCCCCc
Confidence 84321 4 9999998 6 89999999999999987653
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=229.81 Aligned_cols=254 Identities=18% Similarity=0.227 Sum_probs=195.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+++|+||||.||||+||+++|+..|++| +++.--..+... ++.. .+....++.+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~V---Ia~Dn~ftg~k~------n~~~----------------~~~~~~fel~ 80 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEV---IALDNYFTGRKE------NLEH----------------WIGHPNFELI 80 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeE---EEEecccccchh------hcch----------------hccCcceeEE
Confidence 45899999999999999999999999654 665443222110 0000 0112455566
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccC---cchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTN---FDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
.-|+. +.++.+||.|||+||..+ +..++...+.+|+.||.+++.+|++. + +||+|.||+.|||
T Consensus 81 ~hdv~------------~pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYg 146 (350)
T KOG1429|consen 81 RHDVV------------EPLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYG 146 (350)
T ss_pred Eeech------------hHHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccC
Confidence 66665 357789999999999764 45667778999999999999999997 3 8999999999999
Q ss_pred ccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 168 EESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 168 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
++.. .|..+.++.. ..+.++...|...|..+|.+
T Consensus 147 dp~~------hpq~e~ywg~----------------------------------------vnpigpr~cydegKr~aE~L 180 (350)
T KOG1429|consen 147 DPLV------HPQVETYWGN----------------------------------------VNPIGPRSCYDEGKRVAETL 180 (350)
T ss_pred Cccc------CCCccccccc----------------------------------------cCcCCchhhhhHHHHHHHHH
Confidence 8541 1111111110 01236778999999999999
Q ss_pred HHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 248 IEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 248 v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
+..| ..|+.+.|.|+.++|||...-. ++ +.++.++....++....++|+|.+.+.|.+|+|++++++.+++.+
T Consensus 181 ~~~y~k~~giE~rIaRifNtyGPrm~~~----dg-rvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~ 255 (350)
T KOG1429|consen 181 CYAYHKQEGIEVRIARIFNTYGPRMHMD----DG-RVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESD 255 (350)
T ss_pred HHHhhcccCcEEEEEeeecccCCccccC----CC-hhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCC
Confidence 9988 5689999999999999876433 32 667788889999999999999999999999999999999999854
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
. ..-+|++++ +.+|+.|+++++.+..+..
T Consensus 256 ~------~~pvNiGnp--~e~Tm~elAemv~~~~~~~ 284 (350)
T KOG1429|consen 256 Y------RGPVNIGNP--GEFTMLELAEMVKELIGPV 284 (350)
T ss_pred C------cCCcccCCc--cceeHHHHHHHHHHHcCCC
Confidence 3 334999999 8999999999999988543
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=234.89 Aligned_cols=228 Identities=28% Similarity=0.389 Sum_probs=179.4
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|||||||||||++++++|+++|+. |+.+.|++......+. ..++.++.+|+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~---v~~~~~~~~~~~~~~~--------------------------~~~~~~~~~dl 51 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHE---VIVLSRSSNSESFEEK--------------------------KLNVEFVIGDL 51 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTE---EEEEESCSTGGHHHHH--------------------------HTTEEEEESET
T ss_pred EEEEccCCHHHHHHHHHHHHcCCc---cccccccccccccccc--------------------------cceEEEEEeec
Confidence 799999999999999999999975 4788887665322111 13789999999
Q ss_pred CCCCCCCCchhhHHHhccC--ccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 95 TREDLGVKDSNLREEMWNK--LDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
. +.+..+.++++ +|+|||+||.... .......++.|+.++.+++++|++. ++++||++||+.+|+..
T Consensus 52 ~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~ 123 (236)
T PF01370_consen 52 T-------DKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDP 123 (236)
T ss_dssp T-------SHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSS
T ss_pred c-------ccccccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 9 56666677774 5999999998631 1456778899999999999999998 67999999999999876
Q ss_pred c-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 170 S-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 170 ~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
. ..++|+... .+.+.|+.+|..+|+++
T Consensus 124 ~~~~~~e~~~~----------------------------------------------------~~~~~Y~~~K~~~e~~~ 151 (236)
T PF01370_consen 124 DGEPIDEDSPI----------------------------------------------------NPLSPYGASKRAAEELL 151 (236)
T ss_dssp SSSSBETTSGC----------------------------------------------------CHSSHHHHHHHHHHHHH
T ss_pred ccccccccccc----------------------------------------------------ccccccccccccccccc
Confidence 3 233443221 35678999999999999
Q ss_pred HHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 249 EHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 249 ~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
+++ ..+++++++||+.|||+. .+.. ........++..+.+|....++++++..++++||+|+|++++.++.+..
T Consensus 152 ~~~~~~~~~~~~~~R~~~vyG~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 227 (236)
T PF01370_consen 152 RDYAKKYGLRVTILRPPNVYGPG-NPNN---NSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK 227 (236)
T ss_dssp HHHHHHHTSEEEEEEESEEESTT-SSSS---STSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccccccccccccc-cccc---ccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC
Confidence 987 348999999999999999 1111 1114455778888888877888999999999999999999999998644
Q ss_pred cCCCCCCcEEEec
Q 037479 327 KQPSDVNNIYQVG 339 (492)
Q Consensus 327 ~~~~~~~~iy~i~ 339 (492)
.. +++||++
T Consensus 228 -~~---~~~yNig 236 (236)
T PF01370_consen 228 -AA---GGIYNIG 236 (236)
T ss_dssp -TT---TEEEEES
T ss_pred -CC---CCEEEeC
Confidence 22 7899985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=246.48 Aligned_cols=261 Identities=18% Similarity=0.167 Sum_probs=186.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|||||||||||++|+++|++.|++ |+++.|+...... .++. .+ ..+. .....++.++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~---V~~~~r~~~~~~~-~~~~-~~---------~~~~-----~~~~~~~~~~ 65 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYE---VHGIIRRSSNFNT-QRLD-HI---------YIDP-----HPNKARMKLH 65 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCE---EEEEecccccccc-cchh-hh---------cccc-----ccccCceEEE
Confidence 5789999999999999999999999974 5888886542111 1111 00 0000 0002468899
Q ss_pred ecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccce-----eEEEe
Q 037479 91 PGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLI-----VLVHV 160 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-----~~V~v 160 (492)
.+|++ +.+....+++ ++|+|||+||..... +.....+++|+.||.+++++|++. +++ +||++
T Consensus 66 ~~Dl~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~ 137 (340)
T PLN02653 66 YGDLS-------DASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQA 137 (340)
T ss_pred EecCC-------CHHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEe
Confidence 99999 5544556665 479999999976432 345667899999999999999987 543 89999
Q ss_pred eeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 161 STAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 161 ST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
||..+||.....++|+. +..+.+.|+.|
T Consensus 138 Ss~~vyg~~~~~~~E~~----------------------------------------------------~~~p~~~Y~~s 165 (340)
T PLN02653 138 GSSEMYGSTPPPQSETT----------------------------------------------------PFHPRSPYAVA 165 (340)
T ss_pred ccHHHhCCCCCCCCCCC----------------------------------------------------CCCCCChhHHH
Confidence 99999987543233321 11456899999
Q ss_pred HHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceee-EEecCCCcccceeehhhhhhH
Q 037479 241 KVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLT-CFLGDVKGIVDVIPADMVVNA 317 (492)
Q Consensus 241 K~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~d~v~vddva~~ 317 (492)
|..+|++++.+ ..+++++..|+..+||+...+ .++. ..+..++..+..|... ...+++++.+|++||+|+|++
T Consensus 166 K~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a 241 (340)
T PLN02653 166 KVAAHWYTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEA 241 (340)
T ss_pred HHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCc--ccch--hHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHH
Confidence 99999999877 347888899999999886422 1111 1122223334445433 345889999999999999999
Q ss_pred HHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 318 IVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 318 ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
++.++... . +++||++++ +++|+.|+++.+.+.+|..
T Consensus 242 ~~~~~~~~---~---~~~yni~~g--~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 242 MWLMLQQE---K---PDDYVVATE--ESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred HHHHHhcC---C---CCcEEecCC--CceeHHHHHHHHHHHcCCC
Confidence 99998742 1 468999999 8999999999999998853
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=240.77 Aligned_cols=248 Identities=15% Similarity=0.193 Sum_probs=178.2
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|||||||||||++++++|++.|+. .|+++.|+.... ++. + -....+.+|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~----~~~-~-----------------------~~~~~~~~d~ 50 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT--DILVVDNLRDGH----KFL-N-----------------------LADLVIADYI 50 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc--eEEEEecCCCch----hhh-h-----------------------hhheeeeccC
Confidence 699999999999999999999862 456666654321 111 0 0012456777
Q ss_pred CCCCCCCCchhhHHHhc----cCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 95 TREDLGVKDSNLREEMW----NKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~----~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
. +.+..+.+. .++|+|||+||..... .+....+++|+.|+.+++++|++. ++ +|||+||+++|+..
T Consensus 51 ~-------~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 51 D-------KEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDG 121 (314)
T ss_pred c-------chhHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCC
Confidence 7 444443443 4899999999975433 345677899999999999999987 55 79999999999865
Q ss_pred ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 170 SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 170 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
...+.|+..+ ..+.+.|+.||..+|++++
T Consensus 122 ~~~~~e~~~~---------------------------------------------------~~p~~~Y~~sK~~~e~~~~ 150 (314)
T TIGR02197 122 EAGFREGREL---------------------------------------------------ERPLNVYGYSKFLFDQYVR 150 (314)
T ss_pred CCCcccccCc---------------------------------------------------CCCCCHHHHHHHHHHHHHH
Confidence 3322222110 1356789999999999998
Q ss_pred Hh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEe------cCCCcccceeehhhhhhHHH
Q 037479 250 HL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFL------GDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 250 ~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~d~v~vddva~~ii 319 (492)
++ ..+++++++||+.|||+...+..+ +. .....++..+..|....+. +++++.++++||||+++++.
T Consensus 151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~ 227 (314)
T TIGR02197 151 RRVLPEALSAQVVGLRYFNVYGPREYHKGK-MA--SVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNL 227 (314)
T ss_pred HHhHhhccCCceEEEEEeeccCCCCCCCCC-cc--cHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHH
Confidence 74 346799999999999988643211 11 1223444455555443333 46778899999999999999
Q ss_pred HHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.++.. . . +++||++++ .++|++|+++.+.+.+|..+
T Consensus 228 ~~~~~-~--~---~~~yni~~~--~~~s~~e~~~~i~~~~g~~~ 263 (314)
T TIGR02197 228 WLLEN-G--V---SGIFNLGTG--RARSFNDLADAVFKALGKDE 263 (314)
T ss_pred HHHhc-c--c---CceEEcCCC--CCccHHHHHHHHHHHhCCCC
Confidence 99874 1 2 679999998 89999999999999998654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-28 Score=242.46 Aligned_cols=270 Identities=20% Similarity=0.216 Sum_probs=187.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC-HHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS-ATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~-~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++++|+|||||||||++|+++|++.|+ +|+++.|...... ...++. ... .....++.
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~~~~~~~~~~~~~~~-------------~~~-----~~~~~~~~ 61 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGY---KVVVIDNLDNSSEEALRRVK-------------ELA-----GDLGDNLV 61 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCcchHHHHHHHH-------------Hhh-----cccCccce
Confidence 4578999999999999999999999986 4577777543211 111111 000 00124678
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA 163 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~ 163 (492)
++.+|++ +.+.+..+++ ++|+|||+||..... ..+...+++|+.++.+++++|++. ++++||++||+
T Consensus 62 ~~~~D~~-------~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~ 133 (352)
T PLN02240 62 FHKVDLR-------DKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSA 133 (352)
T ss_pred EEecCcC-------CHHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccH
Confidence 8999999 4454555554 689999999975432 345678999999999999999987 78899999999
Q ss_pred eeeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 164 FVWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 164 ~v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
.+|+...+ .++|+. +..+.+.|+.||.
T Consensus 134 ~vyg~~~~~~~~E~~----------------------------------------------------~~~~~~~Y~~sK~ 161 (352)
T PLN02240 134 TVYGQPEEVPCTEEF----------------------------------------------------PLSATNPYGRTKL 161 (352)
T ss_pred HHhCCCCCCCCCCCC----------------------------------------------------CCCCCCHHHHHHH
Confidence 99975321 233331 1145679999999
Q ss_pred HHHHHHHHh---cCCCcEEEEeCCceecCCCCCCCcccc-C-cCchHHHHHhccCcee--eEEec------CCCccccee
Q 037479 243 MGEMFIEHL---KENMSVAIVRPTIITGTYKEPFPGWAE-G-IRTIDSLAVGYGKGRL--TCFLG------DVKGIVDVI 309 (492)
Q Consensus 243 ~aE~~v~~~---~~~~~~~ivRPs~v~g~~~~p~~gw~~-~-~~~~~~~~~~~~~g~~--~~~~~------~~~~~~d~v 309 (492)
.+|++++.+ ..+++++++|++.|||+.....-|.-. . ......++..+..|.. ..+.+ ++.+.+++|
T Consensus 162 ~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i 241 (352)
T PLN02240 162 FIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYI 241 (352)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeE
Confidence 999999875 247899999999999976422111110 0 0122234444443332 12333 678889999
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+++|+|++++.++..........+++||++++ .++|++|+++.+.+.++..
T Consensus 242 ~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~~ 292 (352)
T PLN02240 242 HVMDLADGHIAALRKLFTDPDIGCEAYNLGTG--KGTSVLEMVAAFEKASGKK 292 (352)
T ss_pred EHHHHHHHHHHHHhhhhhccCCCCceEEccCC--CcEeHHHHHHHHHHHhCCC
Confidence 99999999998886431111110579999998 8999999999999999864
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=245.53 Aligned_cols=264 Identities=16% Similarity=0.185 Sum_probs=179.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|||||||||||++|+++|++.|++ |++++|+... .+.+. + +.. .+. ......++.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~---V~~~~r~~~~---~~~l~-~---------l~~-~~~--~~~~~~~~~~ 111 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYS---VRIAVDTQED---KEKLR-E---------MEM-FGE--MGRSNDGIWT 111 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHH-H---------Hhh-hcc--ccccCCceEE
Confidence 56899999999999999999999999975 4777775321 11111 0 000 000 0000135788
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcch---hHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec--e
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDE---RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA--F 164 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~---~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~--~ 164 (492)
+.+|++ +.+.+..+++++|.|||+|+.+.... ......++|+.||.+++++|++..++++|||+||. .
T Consensus 112 v~~Dl~-------d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~ 184 (367)
T PLN02686 112 VMANLT-------EPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLAC 184 (367)
T ss_pred EEcCCC-------CHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHh
Confidence 999999 55555677889999999999764322 22455788999999999999986579999999996 4
Q ss_pred eeccc--c---cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 165 VWGEE--S---GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 165 v~~~~--~---~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
+|+.. . ..++|+... +.+ .+..+.+.|+.
T Consensus 185 vyg~~~~~~~~~~i~E~~~~-----------~~~-----------------------------------~~~~p~~~Y~~ 218 (367)
T PLN02686 185 VWRQNYPHDLPPVIDEESWS-----------DES-----------------------------------FCRDNKLWYAL 218 (367)
T ss_pred cccccCCCCCCcccCCCCCC-----------Chh-----------------------------------hcccccchHHH
Confidence 66531 1 123333211 000 01134568999
Q ss_pred HHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhH
Q 037479 240 TKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNA 317 (492)
Q Consensus 240 sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ 317 (492)
||..+|++++.+ ..+++++++||+.|||+...+.. ... +..+..|.. .+.+++ ..++++|+|+|++
T Consensus 219 sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~--------~~~-~~~~~~g~~-~~~g~g--~~~~v~V~Dva~A 286 (367)
T PLN02686 219 GKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRN--------STA-TIAYLKGAQ-EMLADG--LLATADVERLAEA 286 (367)
T ss_pred HHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCC--------Chh-HHHHhcCCC-ccCCCC--CcCeEEHHHHHHH
Confidence 999999999876 35899999999999999753210 111 222334432 344444 3579999999999
Q ss_pred HHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 318 IVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 318 ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
++.+++....... +++| ++++ .++++.|+++.+.+.+|..
T Consensus 287 ~~~al~~~~~~~~--~~~y-i~~g--~~~s~~e~~~~i~~~~g~~ 326 (367)
T PLN02686 287 HVCVYEAMGNKTA--FGRY-ICFD--HVVSREDEAEELARQIGLP 326 (367)
T ss_pred HHHHHhccCCCCC--CCcE-EEeC--CCccHHHHHHHHHHHcCCC
Confidence 9999874211111 5688 7776 7899999999999999854
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=238.19 Aligned_cols=237 Identities=16% Similarity=0.123 Sum_probs=170.4
Q ss_pred EEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCCC
Q 037479 16 LVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDIT 95 (492)
Q Consensus 16 lITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~ 95 (492)
||||||||||++|++.|++.|++| +++.+. ..+|++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v---~~~~~~-----------------------------------------~~~Dl~ 36 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTN---LVLRTH-----------------------------------------KELDLT 36 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcE---EEeecc-----------------------------------------ccCCCC
Confidence 699999999999999999998754 333221 147887
Q ss_pred CCCCCCCchhhHHHhcc--CccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 96 REDLGVKDSNLREEMWN--KLDVVINLAATTNF----DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 96 ~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
+.+.+..+++ ++|+||||||.... .......+++|+.|+.+++++|++. ++++|||+||++|||..
T Consensus 37 -------~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~ 108 (306)
T PLN02725 37 -------RQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKF 108 (306)
T ss_pred -------CHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCC
Confidence 4444545555 68999999997542 1345567999999999999999997 78999999999999853
Q ss_pred c-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc-hHHHHHHHHHHH
Q 037479 170 S-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN-TYVFTKVMGEMF 247 (492)
Q Consensus 170 ~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n-~Y~~sK~~aE~~ 247 (492)
. ..++|+.... .+..+.+ .|+.||..+|++
T Consensus 109 ~~~~~~E~~~~~------------------------------------------------~~~~p~~~~Y~~sK~~~e~~ 140 (306)
T PLN02725 109 APQPIPETALLT------------------------------------------------GPPEPTNEWYAIAKIAGIKM 140 (306)
T ss_pred CCCCCCHHHhcc------------------------------------------------CCCCCCcchHHHHHHHHHHH
Confidence 2 2333332110 0112334 499999999998
Q ss_pred HHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHH----hccCceeeEE-ecCCCcccceeehhhhhhHHHH
Q 037479 248 IEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAV----GYGKGRLTCF-LGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 248 v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~----~~~~g~~~~~-~~~~~~~~d~v~vddva~~ii~ 320 (492)
++.+ ..+++++++||+.|||+.... .+ ........++. ....|....+ ++++...+++|||+|+|++++.
T Consensus 141 ~~~~~~~~~~~~~~~R~~~vyG~~~~~-~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~ 217 (306)
T PLN02725 141 CQAYRIQYGWDAISGMPTNLYGPHDNF-HP--ENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF 217 (306)
T ss_pred HHHHHHHhCCCEEEEEecceeCCCCCC-CC--CCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence 8766 458999999999999997521 10 00011222322 2233443333 6788889999999999999999
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
++.... . .+.||++++ .++|+.|+++.+.+.++..
T Consensus 218 ~~~~~~--~---~~~~ni~~~--~~~s~~e~~~~i~~~~~~~ 252 (306)
T PLN02725 218 LMRRYS--G---AEHVNVGSG--DEVTIKELAELVKEVVGFE 252 (306)
T ss_pred HHhccc--c---CcceEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 887421 1 467899988 8999999999999998753
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-27 Score=234.64 Aligned_cols=264 Identities=21% Similarity=0.244 Sum_probs=181.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|++| +++.|...... ..+. .+.+ . ...++.++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V---~~~~~~~~~~~--~~~~----------~~~~-~-------~~~~~~~~~~ 57 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDV---VILDNLCNSKR--SVLP----------VIER-L-------GGKHPTFVEG 57 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeE---EEEecCCCchH--hHHH----------HHHH-h-------cCCCceEEEc
Confidence 589999999999999999999999754 66665433211 1110 0000 0 0135678899
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+....+++ ++|+|||+|+..... +.....+++|+.++.+++++|++. ++++||++||+.+||
T Consensus 58 Dl~-------d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg 129 (338)
T PRK10675 58 DIR-------NEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYG 129 (338)
T ss_pred cCC-------CHHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhC
Confidence 999 4444445554 699999999976532 334578899999999999999987 788999999999998
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
.... .++|+... ..+.+.|+.+|..+|+
T Consensus 130 ~~~~~~~~E~~~~---------------------------------------------------~~p~~~Y~~sK~~~E~ 158 (338)
T PRK10675 130 DQPKIPYVESFPT---------------------------------------------------GTPQSPYGKSKLMVEQ 158 (338)
T ss_pred CCCCCccccccCC---------------------------------------------------CCCCChhHHHHHHHHH
Confidence 5421 23332110 1356789999999999
Q ss_pred HHHHhc---CCCcEEEEeCCceecCCCCCCCccccC--cCchHHHHHhccCcee--eEEec------CCCcccceeehhh
Q 037479 247 FIEHLK---ENMSVAIVRPTIITGTYKEPFPGWAEG--IRTIDSLAVGYGKGRL--TCFLG------DVKGIVDVIPADM 313 (492)
Q Consensus 247 ~v~~~~---~~~~~~ivRPs~v~g~~~~p~~gw~~~--~~~~~~~~~~~~~g~~--~~~~~------~~~~~~d~v~vdd 313 (492)
+++++. .+++++++|++.|||+.....-|--+. .......+..+..+.. ..+.+ ++.+.+++|||+|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D 238 (338)
T PRK10675 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_pred HHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHH
Confidence 998762 479999999999999753111110000 0112223333333321 12222 5678899999999
Q ss_pred hhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 314 VVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 314 va~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+|++++.++........ +++||++++ +++|+.|+++.+.+.+|+.
T Consensus 239 ~a~~~~~~~~~~~~~~~--~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 283 (338)
T PRK10675 239 LADGHVAAMEKLANKPG--VHIYNLGAG--VGSSVLDVVNAFSKACGKP 283 (338)
T ss_pred HHHHHHHHHHhhhccCC--CceEEecCC--CceeHHHHHHHHHHHhCCC
Confidence 99999999874222222 579999998 8999999999999999864
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-27 Score=235.60 Aligned_cols=252 Identities=20% Similarity=0.206 Sum_probs=208.9
Q ss_pred CcccHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhh
Q 037479 2 ELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNA 81 (492)
Q Consensus 2 ~~~~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~ 81 (492)
+++.+..++.||+||||||+|-+|+.+++++++.+| ++|+++.|++.+....+. .++..+|
T Consensus 240 d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~~------------el~~~~~----- 300 (588)
T COG1086 240 DTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLIDM------------ELREKFP----- 300 (588)
T ss_pred CHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHHH------------HHHhhCC-----
Confidence 455788999999999999999999999999999866 899999998765432221 1222222
Q ss_pred hccCceEEEecCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhccccee
Q 037479 82 LISEKITLVPGDITREDLGVKDSNLREEMWNK--LDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIV 156 (492)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~ 156 (492)
..++.++-||+. |.+.++.++++ +|+|||+||..+. ..++.+++++|+.||+|++++|.++ ++++
T Consensus 301 --~~~~~~~igdVr-------D~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~ 370 (588)
T COG1086 301 --ELKLRFYIGDVR-------DRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKK 370 (588)
T ss_pred --CcceEEEecccc-------cHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCE
Confidence 378899999999 77888889887 9999999998775 4678999999999999999999999 9999
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
||.+||--+. +|.|.
T Consensus 371 ~V~iSTDKAV-----------------------------------------------------------------~PtNv 385 (588)
T COG1086 371 FVLISTDKAV-----------------------------------------------------------------NPTNV 385 (588)
T ss_pred EEEEecCccc-----------------------------------------------------------------CCchH
Confidence 9999993222 67899
Q ss_pred HHHHHHHHHHHHHHhcC-----CCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 237 YVFTKVMGEMFIEHLKE-----NMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~~~-----~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
||.||.+||.+++.+.. +-..+++|.|+|.|+.. ..++-+...+.+|... ...+++..+-|+.+
T Consensus 386 mGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG----------SViPlFk~QI~~Ggpl-TvTdp~mtRyfMTI 454 (588)
T COG1086 386 MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG----------SVIPLFKKQIAEGGPL-TVTDPDMTRFFMTI 454 (588)
T ss_pred hhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC----------CCHHHHHHHHHcCCCc-cccCCCceeEEEEH
Confidence 99999999999988722 47899999999999988 3445566777777553 34688899999999
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWI 365 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~~ 365 (492)
.+.++.++.|.... .+ |++|-+--| .|++..|+++.+.+.+|..|..
T Consensus 455 ~EAv~LVlqA~a~~---~g--GeifvldMG--epvkI~dLAk~mi~l~g~~~~~ 501 (588)
T COG1086 455 PEAVQLVLQAGAIA---KG--GEIFVLDMG--EPVKIIDLAKAMIELAGQTPPG 501 (588)
T ss_pred HHHHHHHHHHHhhc---CC--CcEEEEcCC--CCeEHHHHHHHHHHHhCCCCCC
Confidence 99999999998742 22 899999998 8999999999999999966644
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=238.81 Aligned_cols=261 Identities=18% Similarity=0.227 Sum_probs=174.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|||||||||||++++++|++.|+ +|+++.|+... .+++. .... ...++.++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~---~V~~~~r~~~~---~~~~~-------------~~~~------~~~~~~~~ 63 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGY---TVHATLRDPAK---SLHLL-------------SKWK------EGDRLRLF 63 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHH-------------Hhhc------cCCeEEEE
Confidence 578999999999999999999999996 45777885422 11111 0000 01468899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-----hhHHH-----HHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-----ERYDV-----ALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-----~~~~~-----~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
.+|++ +.+....+++++|+|||+||..... .++.. .+++|+.|+.+++++|++.+++++||++
T Consensus 64 ~~Dl~-------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~ 136 (353)
T PLN02896 64 RADLQ-------EEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFT 136 (353)
T ss_pred ECCCC-------CHHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEE
Confidence 99999 4555567778999999999976432 12332 4455679999999999887558899999
Q ss_pred eeceeecccc------cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 161 STAFVWGEES------GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 161 ST~~v~~~~~------~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
||..+||... ..++|+... +. +... .+..+.
T Consensus 137 SS~~vyg~~~~~~~~~~~~~E~~~~---------p~--~~~~--------------------------------~~~~~~ 173 (353)
T PLN02896 137 SSISTLTAKDSNGRWRAVVDETCQT---------PI--DHVW--------------------------------NTKASG 173 (353)
T ss_pred echhhccccccCCCCCCccCcccCC---------cH--HHhh--------------------------------ccCCCC
Confidence 9999998432 122332110 00 0000 001234
Q ss_pred chHHHHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCC-CccccCcCchHHHHHhccCceeeE--Eec---CCCccc
Q 037479 235 NTYVFTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPF-PGWAEGIRTIDSLAVGYGKGRLTC--FLG---DVKGIV 306 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~-~gw~~~~~~~~~~~~~~~~g~~~~--~~~---~~~~~~ 306 (492)
+.|+.||.++|++++.+ ..+++++++||+.||||...+. +.++ ..+ .....|.... ..+ .....+
T Consensus 174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~------~~~-~~~~~g~~~~~~~~~~~~~~~~~~ 246 (353)
T PLN02896 174 WVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSI------QVL-LSPITGDSKLFSILSAVNSRMGSI 246 (353)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchH------HHH-HHHhcCCccccccccccccccCce
Confidence 58999999999999887 3589999999999999976431 2111 111 1111222111 111 111246
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
|+|||+|+|++++.++... . . +.+|+++ + .++++.|+++.+.+.++.
T Consensus 247 dfi~v~Dva~a~~~~l~~~-~-~---~~~~~~~-~--~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 247 ALVHIEDICDAHIFLMEQT-K-A---EGRYICC-V--DSYDMSELINHLSKEYPC 293 (353)
T ss_pred eEEeHHHHHHHHHHHHhCC-C-c---CccEEec-C--CCCCHHHHHHHHHHhCCC
Confidence 9999999999999998742 1 1 3468654 4 689999999999998863
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=231.22 Aligned_cols=226 Identities=21% Similarity=0.241 Sum_probs=169.5
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+|||||||||+|++++++|++.|++ |+++.|+ .+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~---v~~~~r~------------------------------------------~~d 35 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRV---VVALTSS------------------------------------------QLD 35 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCE---EEEeCCc------------------------------------------ccC
Confidence 5899999999999999999999975 4677663 256
Q ss_pred CCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 94 ITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
+. +.+.+..++++ +|+|||+||..... ......+++|+.|+.+++++|++. +. +|||+||.++|+.
T Consensus 36 ~~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~ 106 (287)
T TIGR01214 36 LT-------DPEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDG 106 (287)
T ss_pred CC-------CHHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecC
Confidence 66 44445566664 59999999976543 245667899999999999999987 44 8999999999976
Q ss_pred ccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 169 ESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 169 ~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
..+ .++|+.. ..+.+.|+.+|..+|++
T Consensus 107 ~~~~~~~E~~~----------------------------------------------------~~~~~~Y~~~K~~~E~~ 134 (287)
T TIGR01214 107 EGKRPYREDDA----------------------------------------------------TNPLNVYGQSKLAGEQA 134 (287)
T ss_pred CCCCCCCCCCC----------------------------------------------------CCCcchhhHHHHHHHHH
Confidence 321 2233211 13567899999999999
Q ss_pred HHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhc
Q 037479 248 IEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAK 327 (492)
Q Consensus 248 v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~ 327 (492)
++.+ +++++|+||++|||+.... .....++..+..+....+.+ +...++++++|+|++++.++... .
T Consensus 135 ~~~~--~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~-~ 201 (287)
T TIGR01214 135 IRAA--GPNALIVRTSWLYGGGGGR--------NFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRL-A 201 (287)
T ss_pred HHHh--CCCeEEEEeeecccCCCCC--------CHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhc-c
Confidence 9885 6799999999999987421 12233444444443323333 35679999999999999998742 1
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 328 QPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 328 ~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.. +++||++++ .++|+.|+++.+.+.+++..
T Consensus 202 ~~---~~~~ni~~~--~~~s~~e~~~~i~~~~~~~~ 232 (287)
T TIGR01214 202 RA---RGVYHLANS--GQCSWYEFAQAIFEEAGADG 232 (287)
T ss_pred CC---CCeEEEECC--CCcCHHHHHHHHHHHhCccc
Confidence 12 689999998 89999999999999998754
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=236.38 Aligned_cols=225 Identities=13% Similarity=0.084 Sum_probs=169.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||+|++|+++|++.|+ +|++++|+.... ..+. ..+++++.|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~---~V~~l~R~~~~~---~~l~------------------------~~~v~~v~~ 50 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY---QVRCLVRNLRKA---SFLK------------------------EWGAELVYG 50 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcChHHh---hhHh------------------------hcCCEEEEC
Confidence 5899999999999999999999996 458999974321 1111 146889999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM 172 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~ 172 (492)
|++ +.+.+..+++++|+|||+++... .......++|+.|+.+++++|++. ++++|||+||..+..
T Consensus 51 Dl~-------d~~~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~----- 115 (317)
T CHL00194 51 DLS-------LPETLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQ----- 115 (317)
T ss_pred CCC-------CHHHHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccccccc-----
Confidence 999 55556688899999999986432 233456789999999999999998 899999999853221
Q ss_pred eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHhc
Q 037479 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLK 252 (492)
Q Consensus 173 i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 252 (492)
....+|..+|..+|+.+.+
T Consensus 116 -----------------------------------------------------------~~~~~~~~~K~~~e~~l~~-- 134 (317)
T CHL00194 116 -----------------------------------------------------------YPYIPLMKLKSDIEQKLKK-- 134 (317)
T ss_pred -----------------------------------------------------------cCCChHHHHHHHHHHHHHH--
Confidence 1124588899999999876
Q ss_pred CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCC
Q 037479 253 ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDV 332 (492)
Q Consensus 253 ~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~ 332 (492)
.+++++|+||+.+|+..-. ........+.. ....++...+++|+++|+|+++..++... ...
T Consensus 135 ~~l~~tilRp~~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~~~--- 196 (317)
T CHL00194 135 SGIPYTIFRLAGFFQGLIS-------------QYAIPILEKQP-IWITNESTPISYIDTQDAAKFCLKSLSLP-ETK--- 196 (317)
T ss_pred cCCCeEEEeecHHhhhhhh-------------hhhhhhccCCc-eEecCCCCccCccCHHHHHHHHHHHhcCc-ccc---
Confidence 6899999999987753210 01111112222 22345567789999999999999988642 222
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 333 NNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 333 ~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++||++++ .++|+.|+++.+.+..|+..
T Consensus 197 ~~~~ni~g~--~~~s~~el~~~~~~~~g~~~ 225 (317)
T CHL00194 197 NKTFPLVGP--KSWNSSEIISLCEQLSGQKA 225 (317)
T ss_pred CcEEEecCC--CccCHHHHHHHHHHHhCCCC
Confidence 789999998 89999999999999998754
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-27 Score=229.55 Aligned_cols=261 Identities=12% Similarity=0.067 Sum_probs=174.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+++|||||||||||++++++|+++|++ |++++|+.......+.+. + +. + ...+++++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~---V~~~~R~~~~~~~~~~~~-~---------l~---~------~~~~~~~~ 62 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYT---VHAAVQKNGETEIEKEIR-G---------LS---C------EEERLKVF 62 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEEcCchhhhHHHHHH-h---------cc---c------CCCceEEE
Confidence 3689999999999999999999999974 588888643221111111 0 00 0 01468889
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
.+|++ +.+....++.++|.|+|+++.... ....+..+++|+.||.+++++|.+..++++||++||..++...
T Consensus 63 ~~Dl~-------d~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~ 135 (297)
T PLN02583 63 DVDPL-------DYHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWR 135 (297)
T ss_pred EecCC-------CHHHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecc
Confidence 99999 555555778899999998875532 2235678999999999999999886567899999997654311
Q ss_pred -ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 170 -SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 170 -~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
.+...+.+++ ++.+.+++.. ......|+.||.++|+++
T Consensus 136 ~~~~~~~~~~~------E~~~~~~~~~-----------------------------------~~~~~~Y~~sK~~aE~~~ 174 (297)
T PLN02583 136 DDNISTQKDVD------ERSWSDQNFC-----------------------------------RKFKLWHALAKTLSEKTA 174 (297)
T ss_pred cccCCCCCCCC------cccCCCHHHH-----------------------------------hhcccHHHHHHHHHHHHH
Confidence 1000011111 1111111100 012246999999999999
Q ss_pred HHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 249 EHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 249 ~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
+++ ..+++++++||+.|+|+...+.. .+ ..+.. .... ....++|+|||||++++.|++. +
T Consensus 175 ~~~~~~~gi~~v~lrp~~v~Gp~~~~~~----------~~----~~~~~-~~~~--~~~~~~v~V~Dva~a~~~al~~-~ 236 (297)
T PLN02583 175 WALAMDRGVNMVSINAGLLMGPSLTQHN----------PY----LKGAA-QMYE--NGVLVTVDVNFLVDAHIRAFED-V 236 (297)
T ss_pred HHHHHHhCCcEEEEcCCcccCCCCCCch----------hh----hcCCc-ccCc--ccCcceEEHHHHHHHHHHHhcC-c
Confidence 876 35899999999999998763311 01 11111 1111 2345799999999999999973 2
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCCC
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWI 365 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~~ 365 (492)
.. ++.|+|+++ +...+.++.+++.+.+...|..
T Consensus 237 ~~----~~r~~~~~~--~~~~~~~~~~~~~~~~p~~~~~ 269 (297)
T PLN02583 237 SS----YGRYLCFNH--IVNTEEDAVKLAQMLSPLIPSP 269 (297)
T ss_pred cc----CCcEEEecC--CCccHHHHHHHHHHhCCCCCCC
Confidence 22 457999986 5556788999999988876544
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-27 Score=230.78 Aligned_cols=235 Identities=19% Similarity=0.179 Sum_probs=173.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|||||||||||++++++|++.|. ..+|+++.|+.... ..+. .+.+ ..++.+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~-~~~V~~~~r~~~~~---~~~~-------------~~~~-------~~~~~~ 57 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYN-PKKIIIYSRDELKQ---WEMQ-------------QKFP-------APCLRF 57 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCC-CcEEEEEcCChhHH---HHHH-------------HHhC-------CCcEEE
Confidence 5789999999999999999999999862 23678887753321 1111 0100 146889
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+.+|++ +.+.+..+++++|+|||+||.... ..+....+++|+.|+.+++++|++. ++++||++||....
T Consensus 58 v~~Dl~-------d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~ 129 (324)
T TIGR03589 58 FIGDVR-------DKERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA 129 (324)
T ss_pred EEccCC-------CHHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC
Confidence 999999 555566788899999999997542 2345678999999999999999987 78899999984211
Q ss_pred cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 167 GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 167 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
.+.++|+.||+.+|+
T Consensus 130 -----------------------------------------------------------------~p~~~Y~~sK~~~E~ 144 (324)
T TIGR03589 130 -----------------------------------------------------------------NPINLYGATKLASDK 144 (324)
T ss_pred -----------------------------------------------------------------CCCCHHHHHHHHHHH
Confidence 235789999999999
Q ss_pred HHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHH
Q 037479 247 FIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVA 321 (492)
Q Consensus 247 ~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~ 321 (492)
++..+ ..+++++++||+.|+|+... ....+......|......+++...++|++|+|+|++++.+
T Consensus 145 l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~----------~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~a 214 (324)
T TIGR03589 145 LFVAANNISGSKGTRFSVVRYGNVVGSRGS----------VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKS 214 (324)
T ss_pred HHHHHHhhccccCcEEEEEeecceeCCCCC----------cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHH
Confidence 98653 35899999999999997531 2223333333443112234677889999999999999999
Q ss_pred HHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHh
Q 037479 322 VVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYF 359 (492)
Q Consensus 322 ~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~ 359 (492)
+... .. +++|+ +++ ..+++.|+++.+.+..
T Consensus 215 l~~~--~~---~~~~~-~~~--~~~sv~el~~~i~~~~ 244 (324)
T TIGR03589 215 LERM--LG---GEIFV-PKI--PSMKITDLAEAMAPEC 244 (324)
T ss_pred HhhC--CC---CCEEc-cCC--CcEEHHHHHHHHHhhC
Confidence 8742 12 67885 554 5689999999998754
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=229.59 Aligned_cols=246 Identities=17% Similarity=0.245 Sum_probs=179.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+|||||||||+++++.|++.|+ +|+++.|+...... + ...+++++.+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~---~------------------------~~~~~~~~~~ 50 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE---EVRVLVRPTSDRRN---L------------------------EGLDVEIVEG 50 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC---EEEEEEecCccccc---c------------------------ccCCceEEEe
Confidence 5899999999999999999999986 56888886543210 0 0146888999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc-
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES- 170 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~- 170 (492)
|++ +.+.+..+++++|+|||+|+.... .+.....+++|+.|+.+++++|++. ++++||++||.++++...
T Consensus 51 D~~-------~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~ 122 (328)
T TIGR03466 51 DLR-------DPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGD 122 (328)
T ss_pred eCC-------CHHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCC
Confidence 999 555566788899999999986543 2456778999999999999999987 788999999999998521
Q ss_pred -cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 171 -GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 171 -~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
..++|+... .+....+.|+.+|..+|++++
T Consensus 123 ~~~~~e~~~~-------------------------------------------------~~~~~~~~Y~~sK~~~e~~~~ 153 (328)
T TIGR03466 123 GTPADETTPS-------------------------------------------------SLDDMIGHYKRSKFLAEQAAL 153 (328)
T ss_pred CCCcCccCCC-------------------------------------------------CcccccChHHHHHHHHHHHHH
Confidence 122222110 001234689999999999998
Q ss_pred Hh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhc
Q 037479 250 HL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAK 327 (492)
Q Consensus 250 ~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~ 327 (492)
++ ..+++++++||+.+||+..... .....++.....+...... +...+++|++|+|++++.++...
T Consensus 154 ~~~~~~~~~~~ilR~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~-- 221 (328)
T TIGR03466 154 EMAAEKGLPVVIVNPSTPIGPRDIKP-------TPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERG-- 221 (328)
T ss_pred HHHHhcCCCEEEEeCCccCCCCCCCC-------CcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCC--
Confidence 87 3489999999999999875211 1112233333333322222 23468999999999999988742
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 328 QPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 328 ~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.. +..|+++ + .++|+.|+++.+.+.+|+..
T Consensus 222 ~~---~~~~~~~-~--~~~s~~e~~~~i~~~~g~~~ 251 (328)
T TIGR03466 222 RI---GERYILG-G--ENLTLKQILDKLAEITGRPA 251 (328)
T ss_pred CC---CceEEec-C--CCcCHHHHHHHHHHHhCCCC
Confidence 22 6789885 4 68999999999999998653
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-27 Score=221.76 Aligned_cols=241 Identities=21% Similarity=0.242 Sum_probs=173.0
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
||||||+|.||+.|+++|++.+| ++|+++.|++......++ .+++..+. ..+...+.++.||+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~l~~l~~------------~l~~~~~~---~~v~~~~~~vigDv 63 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENKLYELER------------ELRSRFPD---PKVRFEIVPVIGDV 63 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHHHHHHHH------------HCHHHC-----TTCEEEEE--CTSC
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhHHHHHHH------------HHhhcccc---cCcccccCceeecc
Confidence 79999999999999999999776 789999998654332222 12222111 00112345679999
Q ss_pred CCCCCCCCchhhHHHhcc--CccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 95 TREDLGVKDSNLREEMWN--KLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
+ |.+.+..+++ ++|+|||.||..+. ..++.+++++|+.||+|++++|.+. ++++||++||--+.
T Consensus 64 r-------d~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv--- 132 (293)
T PF02719_consen 64 R-------DKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAV--- 132 (293)
T ss_dssp C-------HHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCS---
T ss_pred c-------CHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccC---
Confidence 9 7777888888 99999999998765 3577899999999999999999998 89999999994322
Q ss_pred ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 170 SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 170 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
+|.|.|+.||+++|+++.
T Consensus 133 --------------------------------------------------------------~PtnvmGatKrlaE~l~~ 150 (293)
T PF02719_consen 133 --------------------------------------------------------------NPTNVMGATKRLAEKLVQ 150 (293)
T ss_dssp --------------------------------------------------------------S--SHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCCcHHHHHHHHHHHHHH
Confidence 567999999999999999
Q ss_pred HhcC-----CCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 250 HLKE-----NMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 250 ~~~~-----~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
.+.. +..++++|.++|.|+.. ..++-+..++..|.+.+ ..+++..+-|+.+++.++.++.|+..
T Consensus 151 ~~~~~~~~~~t~f~~VRFGNVlgS~G----------SVip~F~~Qi~~g~PlT-vT~p~mtRffmti~EAv~Lvl~a~~~ 219 (293)
T PF02719_consen 151 AANQYSGNSDTKFSSVRFGNVLGSRG----------SVIPLFKKQIKNGGPLT-VTDPDMTRFFMTIEEAVQLVLQAAAL 219 (293)
T ss_dssp HHCCTSSSS--EEEEEEE-EETTGTT----------SCHHHHHHHHHTTSSEE-ECETT-EEEEE-HHHHHHHHHHHHHH
T ss_pred HHhhhCCCCCcEEEEEEecceecCCC----------cHHHHHHHHHHcCCcce-eCCCCcEEEEecHHHHHHHHHHHHhh
Confidence 8832 47999999999999887 44556677788886644 45778889999999999999999874
Q ss_pred hhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 325 HAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
... +++|-.--+ .|+++.|+++.+.+.+|..|
T Consensus 220 ~~~-----geifvl~mg--~~v~I~dlA~~~i~~~g~~~ 251 (293)
T PF02719_consen 220 AKG-----GEIFVLDMG--EPVKILDLAEAMIELSGLEP 251 (293)
T ss_dssp --T-----TEEEEE-----TCEECCCHHHHHHHHTT-EE
T ss_pred CCC-----CcEEEecCC--CCcCHHHHHHHHHhhccccc
Confidence 322 889999988 89999999999999998654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=271.61 Aligned_cols=287 Identities=22% Similarity=0.337 Sum_probs=198.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhC-CCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQ-PNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g-~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.++|||||||||+|++++++|++.+ ..+.+|++++|+.......+|+.........+ ......+++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~i~~~ 1039 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIW-----------DEEWASRIEVV 1039 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCC-----------chhhhcceEEE
Confidence 4799999999999999999999876 23458999999877666666654322111110 01112579999
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.||++++.+|+++... ..+.+++|+|||+||.+++..++......|+.||.+++++|++. ++++|+|+||..+++...
T Consensus 1040 ~gDl~~~~lgl~~~~~-~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~ 1117 (1389)
T TIGR03443 1040 LGDLSKEKFGLSDEKW-SDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEY 1117 (1389)
T ss_pred eccCCCccCCcCHHHH-HHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCccc
Confidence 9999999999976665 47778999999999999988777777789999999999999987 788999999999986421
Q ss_pred c-ceeccccCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 171 G-MLYESSFKMGD-TLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 171 ~-~i~E~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
- ...++....+. .+.+..+. ......+.+.|+.||+.+|+++
T Consensus 1118 ~~~~~~~~~~~~~~~~~e~~~~------------------------------------~~~~~~~~~~Y~~sK~~aE~l~ 1161 (1389)
T TIGR03443 1118 YVNLSDELVQAGGAGIPESDDL------------------------------------MGSSKGLGTGYGQSKWVAEYII 1161 (1389)
T ss_pred ccchhhhhhhccCCCCCccccc------------------------------------ccccccCCCChHHHHHHHHHHH
Confidence 0 00000000000 00000000 0001135678999999999999
Q ss_pred HHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee-eEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 249 EHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL-TCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 249 ~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
.++ ..+++++|+||+.|+|+...+. |. ...++..+.++.. .....+....+|++||||||++++.++....
T Consensus 1162 ~~~~~~g~~~~i~Rpg~v~G~~~~g~--~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~ 1234 (1389)
T TIGR03443 1162 REAGKRGLRGCIVRPGYVTGDSKTGA--TN-----TDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPP 1234 (1389)
T ss_pred HHHHhCCCCEEEECCCccccCCCcCC--CC-----chhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCc
Confidence 876 4589999999999999865331 21 1122222222211 1122344557899999999999999876432
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHH
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRY 358 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~ 358 (492)
.... ..+||++++ .+++|.++.+.+.+.
T Consensus 1235 ~~~~--~~i~~~~~~--~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1235 KESE--LAVAHVTGH--PRIRFNDFLGTLKTY 1262 (1389)
T ss_pred ccCC--CCEEEeCCC--CCCcHHHHHHHHHHh
Confidence 1111 569999988 789999999998764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-26 Score=226.42 Aligned_cols=261 Identities=21% Similarity=0.241 Sum_probs=181.5
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+|||||||||||+.++++|++.|++| +++.|...... +++. .+ . . ..+++.+.+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V---~~~~~~~~~~~--~~~~-~~---------~--------~--~~~~~~~~~D 55 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEV---VVLDNLSNGSP--EALK-RG---------E--------R--ITRVTFVEGD 55 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeE---EEEeCCCccch--hhhh-hh---------c--------c--ccceEEEECC
Confidence 58999999999999999999999754 55554332211 1111 00 0 0 0257788999
Q ss_pred CCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 94 ITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
++ +.+..+.+++ ++|+|||+||..... ......+++|+.++.+++++|++. ++++||++||.++++.
T Consensus 56 ~~-------~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 56 LR-------DRELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGE 127 (328)
T ss_pred CC-------CHHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCC
Confidence 99 4444545554 799999999976443 234567899999999999999987 6789999999998875
Q ss_pred ccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 169 ESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 169 ~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
... .++|+. +..+.+.|+.+|+.+|++
T Consensus 128 ~~~~~~~e~~----------------------------------------------------~~~~~~~y~~sK~~~e~~ 155 (328)
T TIGR01179 128 PSSIPISEDS----------------------------------------------------PLGPINPYGRSKLMSERI 155 (328)
T ss_pred CCCCCccccC----------------------------------------------------CCCCCCchHHHHHHHHHH
Confidence 432 222221 113567899999999999
Q ss_pred HHHh--c-CCCcEEEEeCCceecCCCCCCCccccC-cCchHHHHHhccCc--eeeEEe------cCCCcccceeehhhhh
Q 037479 248 IEHL--K-ENMSVAIVRPTIITGTYKEPFPGWAEG-IRTIDSLAVGYGKG--RLTCFL------GDVKGIVDVIPADMVV 315 (492)
Q Consensus 248 v~~~--~-~~~~~~ivRPs~v~g~~~~p~~gw~~~-~~~~~~~~~~~~~g--~~~~~~------~~~~~~~d~v~vddva 315 (492)
++.+ . .+++++++||+.|||+...+..++... .......+.....| ....+. .+++...++||++|++
T Consensus 156 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a 235 (328)
T TIGR01179 156 LRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLA 235 (328)
T ss_pred HHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHH
Confidence 9876 2 689999999999999976544333211 11111212222211 111121 3556778999999999
Q ss_pred hHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 316 NAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 316 ~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++..++........ +++||++++ .++|++|+++.+.+.+|+..
T Consensus 236 ~~~~~~~~~~~~~~~--~~~~n~~~~--~~~s~~ei~~~~~~~~g~~~ 279 (328)
T TIGR01179 236 DAHLAALEYLLNGGE--SHVYNLGYG--QGFSVLEVIEAFKKVSGVDF 279 (328)
T ss_pred HHHHHHHhhhhcCCC--cceEEcCCC--CcccHHHHHHHHHHHhCCCc
Confidence 999999875332222 689999998 88999999999999998653
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=224.57 Aligned_cols=229 Identities=22% Similarity=0.240 Sum_probs=158.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+||||||||+||++|.+.|.+.|++ ++.+.|+ ..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~---v~~~~r~------------------------------------------~~ 35 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYE---VIATSRS------------------------------------------DL 35 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEE---EEEESTT------------------------------------------CS
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCE---EEEeCch------------------------------------------hc
Confidence 79999999999999999999987753 3554342 34
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+....+++ ++|+||||||..+.+ .+++.++++|+.++.+++++|++. + .++||+||.+|++
T Consensus 36 dl~-------d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFd 106 (286)
T PF04321_consen 36 DLT-------DPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFD 106 (286)
T ss_dssp -TT-------SHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-
T ss_pred CCC-------CHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEc
Confidence 666 5555555555 689999999987654 467889999999999999999987 4 4799999999996
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
...+ ...|+..+ +|.|.|+.||..+|+
T Consensus 107 G~~~~~y~E~d~~----------------------------------------------------~P~~~YG~~K~~~E~ 134 (286)
T PF04321_consen 107 GDKGGPYTEDDPP----------------------------------------------------NPLNVYGRSKLEGEQ 134 (286)
T ss_dssp SSTSSSB-TTS--------------------------------------------------------SSHHHHHHHHHHH
T ss_pred CCcccccccCCCC----------------------------------------------------CCCCHHHHHHHHHHH
Confidence 5532 23333221 577999999999999
Q ss_pred HHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 247 FIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 247 ~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
.+++..+ ...|+|++.+||+... +....++..+..|....+ ..+.....++++|+|++++.++.+..
T Consensus 135 ~v~~~~~--~~~IlR~~~~~g~~~~---------~~~~~~~~~~~~~~~i~~--~~d~~~~p~~~~dlA~~i~~l~~~~~ 201 (286)
T PF04321_consen 135 AVRAACP--NALILRTSWVYGPSGR---------NFLRWLLRRLRQGEPIKL--FDDQYRSPTYVDDLARVILELIEKNL 201 (286)
T ss_dssp HHHHH-S--SEEEEEE-SEESSSSS---------SHHHHHHHHHHCTSEEEE--ESSCEE--EEHHHHHHHHHHHHHHHH
T ss_pred HHHHhcC--CEEEEecceecccCCC---------chhhhHHHHHhcCCeeEe--eCCceeCCEEHHHHHHHHHHHHHhcc
Confidence 9998544 8999999999999442 223344555555555444 34667899999999999999998754
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
..... .++||++++ .++|+.|+++.+.+.++..+
T Consensus 202 ~~~~~-~Giyh~~~~--~~~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 202 SGASP-WGIYHLSGP--ERVSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp H-GGG--EEEE---B--S-EEHHHHHHHHHHHHTHCT
T ss_pred ccccc-ceeEEEecC--cccCHHHHHHHHHHHhCCCC
Confidence 31111 589999999 88999999999999999876
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=215.05 Aligned_cols=267 Identities=21% Similarity=0.172 Sum_probs=197.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++||||||.||||+|.+.+|++.|++|--|--+.|+- ....+|.+ +..++ ..+|.+++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~-------------~l~~~------~~~v~f~~ 60 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY--LESLKRVR-------------QLLGE------GKSVFFVE 60 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc--hhHHHHHH-------------HhcCC------CCceEEEE
Confidence 57999999999999999999999999885555555554 23344443 22111 37899999
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+|+. |...++++++ +.|.|+|.||..... +.+..++..|+.||.++++.+++. +++.+|+.||+.||
T Consensus 61 ~Dl~-------D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvY 132 (343)
T KOG1371|consen 61 GDLN-------DAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVY 132 (343)
T ss_pred eccC-------CHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeee
Confidence 9999 7777778887 689999999976543 345678899999999999999998 69999999999999
Q ss_pred cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 167 GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 167 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
|.... -++++..+ . ..+.|+|+.||..+|.
T Consensus 133 G~p~~----ip~te~~~------t----------------------------------------~~p~~pyg~tK~~iE~ 162 (343)
T KOG1371|consen 133 GLPTK----VPITEEDP------T----------------------------------------DQPTNPYGKTKKAIEE 162 (343)
T ss_pred cCcce----eeccCcCC------C----------------------------------------CCCCCcchhhhHHHHH
Confidence 98642 12222111 0 1378999999999999
Q ss_pred HHHHh--cCCCcEEEEeCCceec--CCCC---CCCccccCcCchHHHHHhccCceee--------EEecCCCcccceeeh
Q 037479 247 FIEHL--KENMSVAIVRPTIITG--TYKE---PFPGWAEGIRTIDSLAVGYGKGRLT--------CFLGDVKGIVDVIPA 311 (492)
Q Consensus 247 ~v~~~--~~~~~~~ivRPs~v~g--~~~~---p~~gw~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~d~v~v 311 (492)
++..+ ..++.++++|.+.++| ++.. +..+.-.++. +.+.+...|... ....+++.++|.|+|
T Consensus 163 i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~---p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v 239 (343)
T KOG1371|consen 163 IIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLL---PYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHV 239 (343)
T ss_pred HHHhhhccccceEEEEEeccccCccccCccCCCCccCccccc---ccccchhhcccccceeecCcccccCCCeeecceee
Confidence 99988 3468999999999999 4332 2233333322 122222222221 122456889999999
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPW 364 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~ 364 (492)
-|.|+.++.|+.+...... ..+||++++ .+.+..++...+.+..|....
T Consensus 240 ~Dla~~h~~al~k~~~~~~--~~i~Nlgtg--~g~~V~~lv~a~~k~~g~~~k 288 (343)
T KOG1371|consen 240 LDLADGHVAALGKLRGAAE--FGVYNLGTG--KGSSVLELVTAFEKALGVKIK 288 (343)
T ss_pred EehHHHHHHHhhccccchh--eeeEeecCC--CCccHHHHHHHHHHHhcCCCC
Confidence 9999999999986544332 569999999 889999999999999997643
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-26 Score=230.86 Aligned_cols=238 Identities=19% Similarity=0.214 Sum_probs=175.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.++++|||||||||||+++++.|++.|+ +|++++|+..+........ ++. . ...++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~---~V~~l~R~~~~~~~~~~~~-~~~---------~---------~~~~v~~ 115 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGY---NVVAVAREKSGIRGKNGKE-DTK---------K---------ELPGAEV 115 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEEechhhccccchhh-HHh---------h---------hcCCceE
Confidence 4578999999999999999999999996 4589999764321100000 000 0 0246889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc----CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 90 VPGDITREDLGVKDSNLREEMWN----KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~----~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
+.+|++ +.+.+..+++ ++|+||||+|.... .....+++|+.++.+++++|++. ++++||++||.++
T Consensus 116 v~~Dl~-------d~~~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v 185 (390)
T PLN02657 116 VFGDVT-------DADSLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICV 185 (390)
T ss_pred EEeeCC-------CHHHHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccc
Confidence 999999 5555556666 59999999985321 12345788999999999999987 7899999999865
Q ss_pred ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 166 WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 166 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
++ +.+.|..+|..+|
T Consensus 186 ~~-----------------------------------------------------------------p~~~~~~sK~~~E 200 (390)
T PLN02657 186 QK-----------------------------------------------------------------PLLEFQRAKLKFE 200 (390)
T ss_pred cC-----------------------------------------------------------------cchHHHHHHHHHH
Confidence 42 1246888999999
Q ss_pred HHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc-ceeehhhhhhHHHHHHHh
Q 037479 246 MFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV-DVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 246 ~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-d~v~vddva~~ii~~~~~ 324 (492)
+.+.....+++++|+||+.+||... .++..+..|....+.++++... ++|+++|+|.+++.++.+
T Consensus 201 ~~l~~~~~gl~~tIlRp~~~~~~~~--------------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~ 266 (390)
T PLN02657 201 AELQALDSDFTYSIVRPTAFFKSLG--------------GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLD 266 (390)
T ss_pred HHHHhccCCCCEEEEccHHHhcccH--------------HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhC
Confidence 9887645789999999999996421 1233344555555678877644 689999999999998863
Q ss_pred hhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 325 HAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. ... +++||++++. .++|++|+++.+.+.+|+.+
T Consensus 267 ~-~~~---~~~~~Iggp~-~~~S~~Eia~~l~~~lG~~~ 300 (390)
T PLN02657 267 E-SKI---NKVLPIGGPG-KALTPLEQGEMLFRILGKEP 300 (390)
T ss_pred c-ccc---CCEEEcCCCC-cccCHHHHHHHHHHHhCCCC
Confidence 2 222 6899998751 47999999999999999765
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-26 Score=220.53 Aligned_cols=217 Identities=13% Similarity=0.121 Sum_probs=151.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|||||||||||++|+++|++.|++| ....
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V---~~~~--------------------------------------------- 40 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDF---HYGS--------------------------------------------- 40 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEE---EEec---------------------------------------------
Confidence 4799999999999999999999999755 2211
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNF------DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA 163 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~ 163 (492)
+|+. +.+.+...++ ++|+||||||.... ..++..++++|+.||.+++++|++. +++ ++++||.
T Consensus 41 ~~~~-------~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~ 111 (298)
T PLN02778 41 GRLE-------NRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATG 111 (298)
T ss_pred CccC-------CHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecc
Confidence 1222 1111112222 68999999998642 2456788999999999999999997 675 5677777
Q ss_pred eeeccccc-------ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 164 FVWGEESG-------MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 164 ~v~~~~~~-------~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
.+|+.... .+.|+..+ ..+.+.
T Consensus 112 ~vy~~~~~~p~~~~~~~~Ee~~p---------------------------------------------------~~~~s~ 140 (298)
T PLN02778 112 CIFEYDDAHPLGSGIGFKEEDTP---------------------------------------------------NFTGSF 140 (298)
T ss_pred eEeCCCCCCCcccCCCCCcCCCC---------------------------------------------------CCCCCc
Confidence 77764321 11221111 123489
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhh
Q 037479 237 YVFTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVN 316 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~ 316 (492)
|+.||.++|+++..+. +..++|+++++|.... ....++..+..+......+ .++++++|+++
T Consensus 141 Yg~sK~~~E~~~~~y~---~~~~lr~~~~~~~~~~----------~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~ 202 (298)
T PLN02778 141 YSKTKAMVEELLKNYE---NVCTLRVRMPISSDLS----------NPRNFITKITRYEKVVNIP-----NSMTILDELLP 202 (298)
T ss_pred hHHHHHHHHHHHHHhh---ccEEeeecccCCcccc----------cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHH
Confidence 9999999999998864 4678999877765321 1123444444443222221 27999999999
Q ss_pred HHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 317 AIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 317 ~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+++.++... . +++||++++ .++|+.|+++.+.+.++..
T Consensus 203 al~~~l~~~---~---~g~yNigs~--~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 203 ISIEMAKRN---L---TGIYNFTNP--GVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred HHHHHHhCC---C---CCeEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 999988531 1 459999998 7999999999999999853
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=209.51 Aligned_cols=225 Identities=23% Similarity=0.253 Sum_probs=172.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||++|.||+.|++.|. .+. .|+.+.|+ ..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~---~v~a~~~~------------------------------------------~~ 34 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF---EVIATDRA------------------------------------------EL 34 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc---eEEeccCc------------------------------------------cc
Confidence 459999999999999999987 344 34666553 16
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+...+++. ++|+|||+||.+..+ ...+.++.+|..|+.++.++|++. + -.+||+||-||+.
T Consensus 35 Dit-------d~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-g-a~lVhiSTDyVFD 105 (281)
T COG1091 35 DIT-------DPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-G-ARLVHISTDYVFD 105 (281)
T ss_pred ccc-------ChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-C-CeEEEeecceEec
Confidence 788 5555556666 689999999998776 346889999999999999999998 4 4699999999996
Q ss_pred ccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 168 EESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 168 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
...+ .+|.+.|. .+|.|.|+.||.++|+.
T Consensus 106 G~~~----~~Y~E~D~-----------------------------------------------~~P~nvYG~sKl~GE~~ 134 (281)
T COG1091 106 GEKG----GPYKETDT-----------------------------------------------PNPLNVYGRSKLAGEEA 134 (281)
T ss_pred CCCC----CCCCCCCC-----------------------------------------------CCChhhhhHHHHHHHHH
Confidence 5542 13433222 16789999999999999
Q ss_pred HHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhc
Q 037479 248 IEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAK 327 (492)
Q Consensus 248 v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~ 327 (492)
++++. -...|+|.|+|||..... .+..++.....|.. +..-.++..+.+++.|+|+++..++.....
T Consensus 135 v~~~~--~~~~I~Rtswv~g~~g~n---------Fv~tml~la~~~~~--l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~ 201 (281)
T COG1091 135 VRAAG--PRHLILRTSWVYGEYGNN---------FVKTMLRLAKEGKE--LKVVDDQYGSPTYTEDLADAILELLEKEKE 201 (281)
T ss_pred HHHhC--CCEEEEEeeeeecCCCCC---------HHHHHHHHhhcCCc--eEEECCeeeCCccHHHHHHHHHHHHhcccc
Confidence 99853 578999999999987732 22233444444433 334456778899999999999998874322
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 328 QPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 328 ~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++||+++. ..+||.|+++.+.+.++...
T Consensus 202 -----~~~yH~~~~--g~~Swydfa~~I~~~~~~~~ 230 (281)
T COG1091 202 -----GGVYHLVNS--GECSWYEFAKAIFEEAGVDG 230 (281)
T ss_pred -----CcEEEEeCC--CcccHHHHHHHHHHHhCCCc
Confidence 459999998 77899999999999988543
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-25 Score=213.88 Aligned_cols=235 Identities=18% Similarity=0.163 Sum_probs=161.9
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|||||||||||+++++.|++.|+ +|++++|+........ ...+ .|+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~---------------------------~~~~----~~~ 46 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH---EVTILTRSPPAGANTK---------------------------WEGY----KPW 46 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC---EEEEEeCCCCCCCccc---------------------------ceee----ecc
Confidence 69999999999999999999986 5699999765432100 0011 111
Q ss_pred CCCCCCCCchhhHHHhccCccEEEEcccccCcc-----hhHHHHHHHhHHHHHHHHHHHHhcccc--eeEEEeeeceeec
Q 037479 95 TREDLGVKDSNLREEMWNKLDVVINLAATTNFD-----ERYDVALDLNTFGAKHVLNFSKKCAKL--IVLVHVSTAFVWG 167 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~~~--~~~V~vST~~v~~ 167 (492)
. ... ....+.++|+||||||..... +......++|+.++++++++|++. ++ ..||++||.++||
T Consensus 47 ~-------~~~-~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg 117 (292)
T TIGR01777 47 A-------PLA-ESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYG 117 (292)
T ss_pred c-------ccc-hhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeC
Confidence 1 111 124557899999999975432 234567889999999999999987 44 4688888888888
Q ss_pred ccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
... ..++|+..+ .+.+.|...+...|+
T Consensus 118 ~~~~~~~~E~~~~----------------------------------------------------~~~~~~~~~~~~~e~ 145 (292)
T TIGR01777 118 TSEDRVFTEEDSP----------------------------------------------------AGDDFLAELCRDWEE 145 (292)
T ss_pred CCCCCCcCcccCC----------------------------------------------------CCCChHHHHHHHHHH
Confidence 643 223333211 123345666667777
Q ss_pred HHHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 247 FIEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 247 ~v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
.+... ..+++++|+||+.|||+... +.. ..... .....+ ...++++..+++|+++|+|+++..++...
T Consensus 146 ~~~~~~~~~~~~~ilR~~~v~G~~~~----~~~---~~~~~-~~~~~~---~~~g~~~~~~~~i~v~Dva~~i~~~l~~~ 214 (292)
T TIGR01777 146 AAQAAEDLGTRVVLLRTGIVLGPKGG----ALA---KMLPP-FRLGLG---GPLGSGRQWFSWIHIEDLVQLILFALENA 214 (292)
T ss_pred HhhhchhcCCceEEEeeeeEECCCcc----hhH---HHHHH-HhcCcc---cccCCCCcccccEeHHHHHHHHHHHhcCc
Confidence 76644 35799999999999998531 111 10111 111122 12477888999999999999999998632
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
. . .++||++++ .++|+.|+++.+.+.+|..
T Consensus 215 ~--~---~g~~~~~~~--~~~s~~di~~~i~~~~g~~ 244 (292)
T TIGR01777 215 S--I---SGPVNATAP--EPVRNKEFAKALARALHRP 244 (292)
T ss_pred c--c---CCceEecCC--CccCHHHHHHHHHHHhCCC
Confidence 2 1 568999998 8999999999999999863
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-25 Score=223.36 Aligned_cols=240 Identities=15% Similarity=0.185 Sum_probs=170.5
Q ss_pred CCEEEEe----CCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 12 NKTILVT----GATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 12 ~~~vlIT----GatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.++|||| |||||||++|++.|++.|+ .|++++|+...... + ....+..+. .....++
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~---~V~~l~R~~~~~~~-------~-~~~~~~~~~--------~l~~~~v 112 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH---EVTLFTRGKEPSQK-------M-KKEPFSRFS--------ELSSAGV 112 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC---EEEEEecCCcchhh-------h-ccCchhhhh--------HhhhcCc
Confidence 4689999 9999999999999999997 45899997643210 0 000011000 0112458
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
+++.||+. +.+.. ....++|+|||+++. +..++.+++++|++. ++++|||+||+++|+
T Consensus 113 ~~v~~D~~-------d~~~~-~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~vyg 170 (378)
T PLN00016 113 KTVWGDPA-------DVKSK-VAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAGVYK 170 (378)
T ss_pred eEEEecHH-------HHHhh-hccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHhhcC
Confidence 89999988 31111 112479999999763 245788999999987 899999999999998
Q ss_pred ccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 168 EESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 168 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
.... .++.+. .+.+++. +|..+|++
T Consensus 171 ~~~~----~p~~E~--------------------------------------------------~~~~p~~-sK~~~E~~ 195 (378)
T PLN00016 171 KSDE----PPHVEG--------------------------------------------------DAVKPKA-GHLEVEAY 195 (378)
T ss_pred CCCC----CCCCCC--------------------------------------------------CcCCCcc-hHHHHHHH
Confidence 6431 011110 1112222 89999999
Q ss_pred HHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhc
Q 037479 248 IEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAK 327 (492)
Q Consensus 248 v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~ 327 (492)
+++ .+++++++||+.+||+.... .....++..+..|....+++++....+++|++|+|++++.++.+..
T Consensus 196 l~~--~~l~~~ilRp~~vyG~~~~~--------~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~- 264 (378)
T PLN00016 196 LQK--LGVNWTSFRPQYIYGPGNNK--------DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK- 264 (378)
T ss_pred HHH--cCCCeEEEeceeEECCCCCC--------chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc-
Confidence 876 58999999999999987532 1112334445556555667888899999999999999999987422
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 328 QPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 328 ~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.. +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 265 ~~---~~~yni~~~--~~~s~~el~~~i~~~~g~~~ 295 (378)
T PLN00016 265 AA---GQIFNIVSD--RAVTFDGMAKACAKAAGFPE 295 (378)
T ss_pred cc---CCEEEecCC--CccCHHHHHHHHHHHhCCCC
Confidence 22 689999998 88999999999999998754
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=197.25 Aligned_cols=235 Identities=18% Similarity=0.228 Sum_probs=161.0
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|+|||||||||++|+..|.+.|+ .|++++|+....... ....+.. .+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh---~v~iltR~~~~~~~~---------------------------~~~~v~~--~~- 47 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH---QVTILTRRPPKASQN---------------------------LHPNVTL--WE- 47 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC---eEEEEEcCCcchhhh---------------------------cCccccc--cc-
Confidence 68999999999999999999996 459999987653210 0011111 11
Q ss_pred CCCCCCCCchhhHHHhcc-CccEEEEcccccC----cchh-HHHHHHHhHHHHHHHHHHHHhcc-cceeEEEeeeceeec
Q 037479 95 TREDLGVKDSNLREEMWN-KLDVVINLAATTN----FDER-YDVALDLNTFGAKHVLNFSKKCA-KLIVLVHVSTAFVWG 167 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~~-~vd~Vih~Aa~~~----~~~~-~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~V~vST~~v~~ 167 (492)
. ...... ++|+|||+||..- +++. .+...+..+..|+.|.++..++. +++.||--|....||
T Consensus 48 --------~---~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG 116 (297)
T COG1090 48 --------G---LADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYG 116 (297)
T ss_pred --------h---hhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEec
Confidence 1 112223 7999999999753 3333 35678889999999999988653 577899999999999
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
+... .++|+ -++++++....+.+| |+
T Consensus 117 ~~~~~~~tE~-~~~g~~Fla~lc~~W----------------------------------------------------E~ 143 (297)
T COG1090 117 HSGDRVVTEE-SPPGDDFLAQLCQDW----------------------------------------------------EE 143 (297)
T ss_pred CCCceeeecC-CCCCCChHHHHHHHH----------------------------------------------------HH
Confidence 8653 44555 232222211111111 22
Q ss_pred HHHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 247 FIEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 247 ~v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
...+. ..+.+++++|.++|.|+....++-. .. ....+.| .-.|+|.+.+.|||+||++++|..++++.
T Consensus 144 ~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m-------~~-~fk~glG---G~~GsGrQ~~SWIhieD~v~~I~fll~~~ 212 (297)
T COG1090 144 EALQAQQLGTRVVLLRTGVVLSPDGGALGKM-------LP-LFKLGLG---GKLGSGRQWFSWIHIEDLVNAILFLLENE 212 (297)
T ss_pred HHhhhhhcCceEEEEEEEEEecCCCcchhhh-------cc-hhhhccC---CccCCCCceeeeeeHHHHHHHHHHHHhCc
Confidence 22222 2589999999999999876433211 11 1122222 23589999999999999999999999843
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPW 364 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~ 364 (492)
.. ...||+++| +|++..+|.+.+.+.+++..+
T Consensus 213 -~l----sGp~N~taP--~PV~~~~F~~al~r~l~RP~~ 244 (297)
T COG1090 213 -QL----SGPFNLTAP--NPVRNKEFAHALGRALHRPAI 244 (297)
T ss_pred -CC----CCcccccCC--CcCcHHHHHHHHHHHhCCCcc
Confidence 22 568999999 999999999999999987543
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=218.53 Aligned_cols=201 Identities=18% Similarity=0.181 Sum_probs=153.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+|||||||||++++++|++.|++ |++++|+.... ...++.++.+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~---Vv~l~R~~~~~------------------------------~~~~v~~v~g 47 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHE---VVGIARHRPDS------------------------------WPSSADFIAA 47 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCchhh------------------------------cccCceEEEe
Confidence 58999999999999999999999964 58888863210 0135788999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM 172 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~ 172 (492)
|++ +.+....+++++|+|||+|+.... ..++|+.||.+++++|++. ++++|||+||..
T Consensus 48 DL~-------D~~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~-------- 105 (854)
T PRK05865 48 DIR-------DATAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSGH-------- 105 (854)
T ss_pred eCC-------CHHHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH--------
Confidence 999 555566778899999999986432 4689999999999999987 788999999721
Q ss_pred eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHhc
Q 037479 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLK 252 (492)
Q Consensus 173 i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 252 (492)
|..+|+++.+
T Consensus 106 --------------------------------------------------------------------K~aaE~ll~~-- 115 (854)
T PRK05865 106 --------------------------------------------------------------------QPRVEQMLAD-- 115 (854)
T ss_pred --------------------------------------------------------------------HHHHHHHHHH--
Confidence 6778888865
Q ss_pred CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCC
Q 037479 253 ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDV 332 (492)
Q Consensus 253 ~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~ 332 (492)
.+++++++||+.|||+.. +.| +..+.. ......+++...+|+|||+|+|++++.++.... ..
T Consensus 116 ~gl~~vILRp~~VYGP~~---~~~----------i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~-~~--- 177 (854)
T PRK05865 116 CGLEWVAVRCALIFGRNV---DNW----------VQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV-ID--- 177 (854)
T ss_pred cCCCEEEEEeceEeCCCh---HHH----------HHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCC-cC---
Confidence 589999999999999852 112 111111 111122455667799999999999999886321 11
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHH
Q 037479 333 NNIYQVGSSLRNPLIYTNLQDYAYRY 358 (492)
Q Consensus 333 ~~iy~i~~~~~~~~t~~e~~~~~~~~ 358 (492)
+++||++++ .++|+.|+++.+.+.
T Consensus 178 ggvyNIgsg--~~~Si~EIae~l~~~ 201 (854)
T PRK05865 178 SGPVNLAAP--GELTFRRIAAALGRP 201 (854)
T ss_pred CCeEEEECC--CcccHHHHHHHHhhh
Confidence 579999998 889999999988764
|
|
| >PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-23 Score=166.94 Aligned_cols=92 Identities=37% Similarity=0.535 Sum_probs=83.8
Q ss_pred HHHHhHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHhccccccceEEeechhHHHHHHHhhhcCCccceeecCCCCC
Q 037479 393 RYILPLKGLELANAAFCKYFQSKYNDLNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCI 472 (492)
Q Consensus 393 ~~~~P~~~~d~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~f~~~~w~F~~~n~~~l~~~l~~~d~~~~~F~~d~~~i 472 (492)
.|.+||+++|+++.+.|++ |++.++.+++ .++.+++++|++++|.|+++|+.+|+..|+++|++ +|+||++.|
T Consensus 2 ~h~lPA~~~D~~~~l~g~k--p~~~k~~~ki---~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~--~F~fD~~~i 74 (94)
T PF03015_consen 2 FHFLPAYLLDLILRLFGQK--PRMVKIYRKI---RKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDRE--IFNFDIRSI 74 (94)
T ss_pred cchHHHHHHHHHHHHhCCC--hHHHHHHHHH---HHHHHHHHHHHhCceeecchHHHHHHHhCchhcCc--eecCCCCCC
Confidence 3679999999999999987 9988877765 56677888999999999999999999999999955 999999999
Q ss_pred CHHHHHhccchhhHHHhhcC
Q 037479 473 DWEDYFINTHIPGIVKYAFK 492 (492)
Q Consensus 473 dW~~Y~~~~~~~G~r~y~lk 492 (492)
||++|+.++ ++|+|+|++|
T Consensus 75 dW~~Y~~~~-~~G~rkyllk 93 (94)
T PF03015_consen 75 DWEEYFRNY-IPGIRKYLLK 93 (94)
T ss_pred CHHHHHHHH-HHHHHHHHhC
Confidence 999999995 9999999997
|
The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=211.61 Aligned_cols=221 Identities=13% Similarity=0.109 Sum_probs=149.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
..|+|||||||||||++|++.|.+.|++| .+.
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v------------------------------------------------~~~ 410 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAY------------------------------------------------EYG 410 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeE------------------------------------------------Eee
Confidence 45799999999999999999999888644 111
Q ss_pred ecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccC---cc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 91 PGDITREDLGVKDSNLREEMWN--KLDVVINLAATTN---FD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~---~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
.+|++ +.+.+...++ ++|+||||||.+. .+ .+...++++|+.||.+++++|++. +++ +||+||
T Consensus 411 ~~~l~-------d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss 481 (668)
T PLN02260 411 KGRLE-------DRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFAT 481 (668)
T ss_pred ccccc-------cHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcc
Confidence 24455 3333334444 7999999999763 22 356788999999999999999998 675 788889
Q ss_pred ceeecccccce--eccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 163 AFVWGEESGML--YESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 163 ~~v~~~~~~~i--~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
.+|++...... ...++.+.+. +..+.|.|+.|
T Consensus 482 ~~v~~~~~~~~~~~~~p~~E~~~----------------------------------------------~~~~~~~Yg~s 515 (668)
T PLN02260 482 GCIFEYDAKHPEGSGIGFKEEDK----------------------------------------------PNFTGSFYSKT 515 (668)
T ss_pred cceecCCcccccccCCCCCcCCC----------------------------------------------CCCCCChhhHH
Confidence 88886421000 0012221110 00234899999
Q ss_pred HHHHHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHH
Q 037479 241 KVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 241 K~~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
|..+|+++..+. +..++|++++||..... ...++..+.++.. .+.. ..+...+|+++.+++.
T Consensus 516 K~~~E~~~~~~~---~~~~~r~~~~~~~~~~~----------~~nfv~~~~~~~~-~~~v----p~~~~~~~~~~~~~~~ 577 (668)
T PLN02260 516 KAMVEELLREYD---NVCTLRVRMPISSDLSN----------PRNFITKISRYNK-VVNI----PNSMTVLDELLPISIE 577 (668)
T ss_pred HHHHHHHHHhhh---hheEEEEEEecccCCCC----------ccHHHHHHhccce-eecc----CCCceehhhHHHHHHH
Confidence 999999998862 56788888888754211 1123333322222 1111 1246778999988877
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
++.. .. +++||++++ .++||.|+++.+.+.++
T Consensus 578 l~~~---~~---~giyni~~~--~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 578 MAKR---NL---RGIWNFTNP--GVVSHNEILEMYKDYID 609 (668)
T ss_pred HHHh---CC---CceEEecCC--CcCcHHHHHHHHHHhcC
Confidence 7752 11 579999998 78999999999988764
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-21 Score=203.18 Aligned_cols=202 Identities=18% Similarity=0.200 Sum_probs=144.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|+ +|++++|..... ...+++++.+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~---~Vi~ldr~~~~~------------------------------~~~~ve~v~~ 47 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH---TVSGIAQHPHDA------------------------------LDPRVDYVCA 47 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCChhhc------------------------------ccCCceEEEc
Confidence 5899999999999999999999996 458888753210 0146788999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM 172 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~ 172 (492)
|+++ .. ...++.++|+|||+|+.... . ...+|+.|+.+++++|++. ++ ++||+||.+ |...
T Consensus 48 Dl~d-------~~-l~~al~~~D~VIHLAa~~~~-~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~--G~~~-- 108 (699)
T PRK12320 48 SLRN-------PV-LQELAGEADAVIHLAPVDTS-A----PGGVGITGLAHVANAAARA-GA-RLLFVSQAA--GRPE-- 108 (699)
T ss_pred cCCC-------HH-HHHHhcCCCEEEEcCccCcc-c----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC--CCCc--
Confidence 9994 43 34667789999999986421 1 2358999999999999997 66 699999863 3210
Q ss_pred eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHhc
Q 037479 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLK 252 (492)
Q Consensus 173 i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 252 (492)
.|. .+|.++..
T Consensus 109 ---------------------------------------------------------------~~~----~aE~ll~~-- 119 (699)
T PRK12320 109 ---------------------------------------------------------------LYR----QAETLVST-- 119 (699)
T ss_pred ---------------------------------------------------------------ccc----HHHHHHHh--
Confidence 111 36777665
Q ss_pred CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCC
Q 037479 253 ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDV 332 (492)
Q Consensus 253 ~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~ 332 (492)
.+++++|+|+++|||+...+.. ...+..++..... ...+.+|||||++++++.++.. . .
T Consensus 120 ~~~p~~ILR~~nVYGp~~~~~~-----~r~I~~~l~~~~~----------~~pI~vIyVdDvv~alv~al~~-~--~--- 178 (699)
T PRK12320 120 GWAPSLVIRIAPPVGRQLDWMV-----CRTVATLLRSKVS----------ARPIRVLHLDDLVRFLVLALNT-D--R--- 178 (699)
T ss_pred cCCCEEEEeCceecCCCCcccH-----hHHHHHHHHHHHc----------CCceEEEEHHHHHHHHHHHHhC-C--C---
Confidence 4589999999999998543210 0122233322222 2233469999999999998863 1 1
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHH
Q 037479 333 NNIYQVGSSLRNPLIYTNLQDYAYRY 358 (492)
Q Consensus 333 ~~iy~i~~~~~~~~t~~e~~~~~~~~ 358 (492)
.++||++++ ..+|+.|+.+.+...
T Consensus 179 ~GiyNIG~~--~~~Si~el~~~i~~~ 202 (699)
T PRK12320 179 NGVVDLATP--DTTNVVTAWRLLRSV 202 (699)
T ss_pred CCEEEEeCC--CeeEHHHHHHHHHHh
Confidence 359999999 899999998888665
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=176.94 Aligned_cols=238 Identities=21% Similarity=0.257 Sum_probs=174.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++|-.+-|.|||||+|..++.+|.+.|. +|++--|..+..-. +++ ++ + ....|.+
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GS---QviiPyR~d~~~~r--~lk--vm------------G------dLGQvl~ 113 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGS---QVIIPYRGDEYDPR--HLK--VM------------G------DLGQVLF 113 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCC---eEEEeccCCccchh--hee--ec------------c------cccceee
Confidence 3456788999999999999999999995 55777776543211 110 00 0 0256788
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
..-|+. |++++..+++..++|||+.|.- +....-.+.++|+.+.+++.+.|+++ ++.+|||+|+...+-
T Consensus 114 ~~fd~~-------DedSIr~vvk~sNVVINLIGrd-~eTknf~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv-- 182 (391)
T KOG2865|consen 114 MKFDLR-------DEDSIRAVVKHSNVVINLIGRD-YETKNFSFEDVNVHIAERLARICKEA-GVERFIHVSCLGANV-- 182 (391)
T ss_pred eccCCC-------CHHHHHHHHHhCcEEEEeeccc-cccCCcccccccchHHHHHHHHHHhh-Chhheeehhhccccc--
Confidence 888888 7888889999999999999852 22222345789999999999999998 999999999865331
Q ss_pred ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 170 SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 170 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
..++-|-.||+++|..++
T Consensus 183 --------------------------------------------------------------~s~Sr~LrsK~~gE~aVr 200 (391)
T KOG2865|consen 183 --------------------------------------------------------------KSPSRMLRSKAAGEEAVR 200 (391)
T ss_pred --------------------------------------------------------------cChHHHHHhhhhhHHHHH
Confidence 234678899999999999
Q ss_pred HhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC-CcccceeehhhhhhHHHHHHHhhhcC
Q 037479 250 HLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV-KGIVDVIPADMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 250 ~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~d~v~vddva~~ii~~~~~~~~~ 328 (492)
+..+ ..+|+||+.|||..+..+.-|.. +... -|-+ .+.+.+ +..-..|+|-|||.+|+.|+.++ ..
T Consensus 201 dafP--eAtIirPa~iyG~eDrfln~ya~-------~~rk--~~~~-pL~~~GekT~K~PVyV~DVaa~IvnAvkDp-~s 267 (391)
T KOG2865|consen 201 DAFP--EATIIRPADIYGTEDRFLNYYAS-------FWRK--FGFL-PLIGKGEKTVKQPVYVVDVAAAIVNAVKDP-DS 267 (391)
T ss_pred hhCC--cceeechhhhcccchhHHHHHHH-------HHHh--cCce-eeecCCcceeeccEEEehHHHHHHHhccCc-cc
Confidence 8643 58999999999998754332221 1111 1122 233333 45567899999999999999854 22
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 329 PSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 329 ~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. |++|..+++ ..+++.|+++.+.+...+-|
T Consensus 268 ~---Gktye~vGP--~~yql~eLvd~my~~~~~~~ 297 (391)
T KOG2865|consen 268 M---GKTYEFVGP--DRYQLSELVDIMYDMAREWP 297 (391)
T ss_pred c---CceeeecCC--chhhHHHHHHHHHHHHhhcc
Confidence 2 899999999 78999999999988776644
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-20 Score=169.27 Aligned_cols=182 Identities=25% Similarity=0.323 Sum_probs=141.3
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|+|+||||++|+.++++|+++|+ +|++++|++.... . ..+++++.+|+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~---~V~~~~R~~~~~~---------------------------~--~~~~~~~~~d~ 48 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH---EVTALVRSPSKAE---------------------------D--SPGVEIIQGDL 48 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS---EEEEEESSGGGHH---------------------------H--CTTEEEEESCT
T ss_pred eEEECCCChHHHHHHHHHHHCCC---EEEEEecCchhcc---------------------------c--ccccccceeee
Confidence 79999999999999999999994 6799999865211 0 27899999999
Q ss_pred CCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccccee
Q 037479 95 TREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLY 174 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~i~ 174 (492)
. +.+.+..+++++|+|||+++.... ....+++++++|++. +++++|++||+.++....+...
T Consensus 49 ~-------d~~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~ 110 (183)
T PF13460_consen 49 F-------DPDSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFS 110 (183)
T ss_dssp T-------CHHHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEE
T ss_pred h-------hhhhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccccCCCCCcccc
Confidence 9 666667888999999999975432 177889999999998 8999999999998876443211
Q ss_pred ccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHhcCC
Q 037479 175 ESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLKEN 254 (492)
Q Consensus 175 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~ 254 (492)
.... +....|...|..+|+++++ .+
T Consensus 111 ~~~~-----------------------------------------------------~~~~~~~~~~~~~e~~~~~--~~ 135 (183)
T PF13460_consen 111 DEDK-----------------------------------------------------PIFPEYARDKREAEEALRE--SG 135 (183)
T ss_dssp GGTC-----------------------------------------------------GGGHHHHHHHHHHHHHHHH--ST
T ss_pred cccc-----------------------------------------------------cchhhhHHHHHHHHHHHHh--cC
Confidence 1000 1235788999999999986 69
Q ss_pred CcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 255 MSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 255 ~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
++++++||+.++|...... ......+....++|+++|+|.+++.++.
T Consensus 136 ~~~~ivrp~~~~~~~~~~~----------------------~~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 136 LNWTIVRPGWIYGNPSRSY----------------------RLIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp SEEEEEEESEEEBTTSSSE----------------------EEESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred CCEEEEECcEeEeCCCcce----------------------eEEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 9999999999999875310 0111144555699999999999999876
|
... |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-20 Score=178.29 Aligned_cols=233 Identities=20% Similarity=0.251 Sum_probs=155.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
-.+|+|+||||||++|+.++++|++.|+ +|++++|+..... . .. + ...++.+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~---~----~~------------~------~~~~~~~ 66 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF---AVKAGVRDVDKAK---T----SL------------P------QDPSLQI 66 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC---EEEEEecCHHHHH---H----hc------------c------cCCceEE
Confidence 4578999999999999999999999986 4588888753210 0 00 0 0146889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-NKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
+.+|++++ .+.....+ .++|+|||+++....... ...+++|+.|+.++++++++. ++++||++||..+++.
T Consensus 67 ~~~Dl~d~------~~~l~~~~~~~~d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~g~ 138 (251)
T PLN00141 67 VRADVTEG------SDKLVEAIGDDSDAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILVNGA 138 (251)
T ss_pred EEeeCCCC------HHHHHHHhhcCCCEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHHc-CCCEEEEEccccccCC
Confidence 99999852 22233455 589999999886432121 223578999999999999986 7889999999999875
Q ss_pred cccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 169 ESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 169 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
..+......|. . ......|..+|..+|+.+
T Consensus 139 ~~~~~~~~~~~------------~--------------------------------------~~~~~~~~~~k~~~e~~l 168 (251)
T PLN00141 139 AMGQILNPAYI------------F--------------------------------------LNLFGLTLVAKLQAEKYI 168 (251)
T ss_pred CcccccCcchh------------H--------------------------------------HHHHHHHHHHHHHHHHHH
Confidence 32110000000 0 011123556799999888
Q ss_pred HHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcC
Q 037479 249 EHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 249 ~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~ 328 (492)
++ .+++++++||+.+++.... |.....+ .......+|+.+|+|+++..++.....
T Consensus 169 ~~--~gi~~~iirpg~~~~~~~~---------------------~~~~~~~-~~~~~~~~i~~~dvA~~~~~~~~~~~~- 223 (251)
T PLN00141 169 RK--SGINYTIVRPGGLTNDPPT---------------------GNIVMEP-EDTLYEGSISRDQVAEVAVEALLCPES- 223 (251)
T ss_pred Hh--cCCcEEEEECCCccCCCCC---------------------ceEEECC-CCccccCcccHHHHHHHHHHHhcChhh-
Confidence 76 6899999999998875321 0110011 111123579999999999999874332
Q ss_pred CCCCCcEEEecCCCCCc-ccHHHHHHHHH
Q 037479 329 PSDVNNIYQVGSSLRNP-LIYTNLQDYAY 356 (492)
Q Consensus 329 ~~~~~~iy~i~~~~~~~-~t~~e~~~~~~ 356 (492)
. ..++.+.+...++ .++.+++..++
T Consensus 224 ~---~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (251)
T PLN00141 224 S---YKVVEIVARADAPKRSYKDLFASIK 249 (251)
T ss_pred c---CcEEEEecCCCCCchhHHHHHHHhh
Confidence 2 5678888754454 88888887765
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.7e-20 Score=179.62 Aligned_cols=209 Identities=17% Similarity=0.235 Sum_probs=147.6
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+||||||||++|++++++|++.|++ |.+++|+..... ..+++.+.+|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~---V~~~~R~~~~~~------------------------------~~~~~~~~~d 47 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVP---FLVASRSSSSSA------------------------------GPNEKHVKFD 47 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCc---EEEEeCCCcccc------------------------------CCCCcccccc
Confidence 5899999999999999999999975 589999865321 1356677899
Q ss_pred CCCCCCCCCchhhHHHhc------cC-ccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 94 ITREDLGVKDSNLREEMW------NK-LDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~------~~-vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+. +.+.+..++ ++ +|.|+|+++... +. ...+.+++++|++. ++++||++||..+.
T Consensus 48 ~~-------d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~---------~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 48 WL-------DEDTWDNPFSSDDGMEPEISAVYLVAPPIP-DL---------APPMIKFIDFARSK-GVRRFVLLSASIIE 109 (285)
T ss_pred CC-------CHHHHHHHHhcccCcCCceeEEEEeCCCCC-Ch---------hHHHHHHHHHHHHc-CCCEEEEeeccccC
Confidence 98 555555666 56 999999987532 11 23456889999998 89999999986543
Q ss_pred cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 167 GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 167 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
.... .+...|+
T Consensus 110 ~~~~---------------------------------------------------------------------~~~~~~~ 120 (285)
T TIGR03649 110 KGGP---------------------------------------------------------------------AMGQVHA 120 (285)
T ss_pred CCCc---------------------------------------------------------------------hHHHHHH
Confidence 1100 1122344
Q ss_pred HHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhc-cCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 247 FIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGY-GKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 247 ~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
.+.+. .+++++++||+.++.....+. + ...+ ..|.+ ..+.++...++|+++|+|+++..++...
T Consensus 121 ~l~~~-~gi~~tilRp~~f~~~~~~~~--~----------~~~~~~~~~~--~~~~g~~~~~~v~~~Dva~~~~~~l~~~ 185 (285)
T TIGR03649 121 HLDSL-GGVEYTVLRPTWFMENFSEEF--H----------VEAIRKENKI--YSATGDGKIPFVSADDIARVAYRALTDK 185 (285)
T ss_pred HHHhc-cCCCEEEEeccHHhhhhcccc--c----------ccccccCCeE--EecCCCCccCcccHHHHHHHHHHHhcCC
Confidence 44431 489999999998875432110 0 0011 11222 3345677889999999999999988742
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
... +++|+++++ .++|+.|+++.+.+.+|+..
T Consensus 186 -~~~---~~~~~l~g~--~~~s~~eia~~l~~~~g~~v 217 (285)
T TIGR03649 186 -VAP---NTDYVVLGP--ELLTYDDVAEILSRVLGRKI 217 (285)
T ss_pred -CcC---CCeEEeeCC--ccCCHHHHHHHHHHHhCCce
Confidence 222 678999998 89999999999999999753
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-21 Score=154.20 Aligned_cols=90 Identities=33% Similarity=0.534 Sum_probs=81.8
Q ss_pred HHHhHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHhccccccceEEeechhHHHHHHHhhhcCCccceeecCCCCCC
Q 037479 394 YILPLKGLELANAAFCKYFQSKYNDLNRKINFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCID 473 (492)
Q Consensus 394 ~~~P~~~~d~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~f~~~~w~F~~~n~~~l~~~l~~~d~~~~~F~~d~~~id 473 (492)
+.+|+.++|.+..+.|++ |.+.++.+++ .++.+++++|++++|.|+++|+++|+..|+++|+ ++|+||+++||
T Consensus 3 ~~lpa~~~d~~~~l~g~~--~~~~~~~~k~---~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr--~~F~fD~~~id 75 (92)
T cd09071 3 HLLPAYLLDLLLRLLGRK--PRLLKLYRKI---HKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDR--ELFNFDIRSID 75 (92)
T ss_pred ccchHHHHHHHHHHhCCC--hHHHHHHHHH---HHHHHHhhccccCeEEeeCcHHHHHHHHCCHHHH--HhCCCCCCCCC
Confidence 569999999999999877 8877776665 5778899999999999999999999999999994 59999999999
Q ss_pred HHHHHhccchhhHHHhhc
Q 037479 474 WEDYFINTHIPGIVKYAF 491 (492)
Q Consensus 474 W~~Y~~~~~~~G~r~y~l 491 (492)
|++|+.++ ++|+|+|++
T Consensus 76 W~~Y~~~~-~~G~r~yll 92 (92)
T cd09071 76 WDDYFENY-IPGLRKYLL 92 (92)
T ss_pred HHHHHHHH-HHHHHHHhC
Confidence 99999996 999999986
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=174.97 Aligned_cols=234 Identities=19% Similarity=0.151 Sum_probs=153.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|||||||||||++++++|++.|+ +|+++.|+... .+.+ +.+ ...++.++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~---~v~~~~r~~~~---~~~~-------------~~~--------~~~~~~~~~ 54 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGD---RVAATVRRPDA---LDDL-------------KAR--------YGDRLWVLQ 54 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHH-------------HHh--------ccCceEEEE
Confidence 47899999999999999999999996 56888886421 1111 111 124688899
Q ss_pred cCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhccc
Q 037479 92 GDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKCAK 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~ 153 (492)
+|+++ .+....++ .++|+|||+||.... .+.++..+++|+.|+.++++++ ++. +
T Consensus 55 ~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~ 126 (276)
T PRK06482 55 LDVTD-------SAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-G 126 (276)
T ss_pred ccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-C
Confidence 99995 33333332 468999999997643 1345678899999999999997 333 5
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..+||++||...... + ..
T Consensus 127 ~~~iv~~sS~~~~~~---------~-----------------------------------------------------~~ 144 (276)
T PRK06482 127 GGRIVQVSSEGGQIA---------Y-----------------------------------------------------PG 144 (276)
T ss_pred CCEEEEEcCcccccC---------C-----------------------------------------------------CC
Confidence 678999998542211 0 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCce---ecCCCCCCCccccCcC-chH-HHHHhccCceeeEEecCCC
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTII---TGTYKEPFPGWAEGIR-TID-SLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v---~g~~~~p~~gw~~~~~-~~~-~~~~~~~~g~~~~~~~~~~ 303 (492)
.+.|+.||+..|.+++.+ ..+++++++||+.+ +|+.... ........ .+. .+......|.
T Consensus 145 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------- 214 (276)
T PRK06482 145 FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDR-GAPLDAYDDTPVGDLRRALADGS--------- 214 (276)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccc-cCCCccccchhhHHHHHHHhhcc---------
Confidence 468999999999888765 25899999999988 4332211 11111111 011 1111111111
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
.. -+.+++|++++++.++.... . +..||++++ +..+..+.++.+.+..+
T Consensus 215 ~~-~~~d~~~~~~a~~~~~~~~~--~---~~~~~~g~~--~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 215 FA-IPGDPQKMVQAMIASADQTP--A---PRRLTLGSD--AYASIRAALSERLAALE 263 (276)
T ss_pred CC-CCCCHHHHHHHHHHHHcCCC--C---CeEEecChH--HHHHHHHHHHHHHHHHH
Confidence 11 13578999999999986321 1 567999998 67777777776655554
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.4e-19 Score=154.40 Aligned_cols=246 Identities=15% Similarity=0.138 Sum_probs=178.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|||||+||.+|+++...+.+.|.+-.+ .+++-+ -.+
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~-wvf~~s-----------------------------------------kd~ 39 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDEN-WVFIGS-----------------------------------------KDA 39 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcc-eEEecc-----------------------------------------ccc
Confidence 79999999999999999999988763211 111111 135
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNF----DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
|++ +.+..+.+++ ++..|||+||.+.. +....++++.|+.---|++..|-+. +++++|.+.|.+++
T Consensus 40 DLt-------~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIf 111 (315)
T KOG1431|consen 40 DLT-------NLADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIF 111 (315)
T ss_pred ccc-------chHHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeec
Confidence 666 3334446665 78999999998853 2334678999999999999999998 89999999888888
Q ss_pred ccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
.+... .|+|...- ...+.+-.-.|.+.|.++.
T Consensus 112 Pdkt~yPIdEtmvh-----------------------------------------------~gpphpsN~gYsyAKr~id 144 (315)
T KOG1431|consen 112 PDKTSYPIDETMVH-----------------------------------------------NGPPHPSNFGYSYAKRMID 144 (315)
T ss_pred CCCCCCCCCHHHhc-----------------------------------------------cCCCCCCchHHHHHHHHHH
Confidence 76542 33333211 1112223347888998888
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhc----cCce-eeEEecCCCcccceeehhhhhhHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGY----GKGR-LTCFLGDVKGIVDVIPADMVVNAI 318 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~----~~g~-~~~~~~~~~~~~d~v~vddva~~i 318 (492)
-.-+.| +.|...+.+-|++||||.+...| ++-...++++.++ ..|. ...++|+|...+.|||+||+|+++
T Consensus 145 v~n~aY~~qhg~~~tsviPtNvfGphDNfnp---e~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~ 221 (315)
T KOG1431|consen 145 VQNQAYRQQHGRDYTSVIPTNVFGPHDNFNP---ENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF 221 (315)
T ss_pred HHHHHHHHHhCCceeeeccccccCCCCCCCc---ccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence 666666 57899999999999999885433 2324455565543 2233 457889999999999999999999
Q ss_pred HHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 319 VVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 319 i~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+..+.+-.. .+-.+++++....+|++|+++.+.+.++-..
T Consensus 222 i~vlr~Y~~-----vEpiils~ge~~EVtI~e~aeaV~ea~~F~G 261 (315)
T KOG1431|consen 222 IWVLREYEG-----VEPIILSVGESDEVTIREAAEAVVEAVDFTG 261 (315)
T ss_pred HHHHHhhcC-----ccceEeccCccceeEHHHHHHHHHHHhCCCc
Confidence 999974332 4568888886679999999999999988653
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.6e-19 Score=170.31 Aligned_cols=228 Identities=15% Similarity=0.122 Sum_probs=148.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++++++|||||||+||++++++|++.|++ |+++.|+... .+++.++ +++ ...++.+
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~---v~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~ 60 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAA---VAIADLNQDG---ANAVADE---------INK---------AGGKAIG 60 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEeCChHH---HHHHHHH---------HHh---------cCceEEE
Confidence 46899999999999999999999999974 5777786532 1121111 111 0245788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHH----HHHHHHHH-Hh
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFG----AKHVLNFS-KK 150 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~~a-~~ 150 (492)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.| +..+++.+ +.
T Consensus 61 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 133 (262)
T PRK13394 61 VAMDVTN-------EDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD 133 (262)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Confidence 9999994 44443333 348999999997542 13456778899999 66667776 44
Q ss_pred cccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 151 CAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 151 ~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
. +.++||++||.......
T Consensus 134 ~-~~~~iv~~ss~~~~~~~------------------------------------------------------------- 151 (262)
T PRK13394 134 D-RGGVVIYMGSVHSHEAS------------------------------------------------------------- 151 (262)
T ss_pred c-CCcEEEEEcchhhcCCC-------------------------------------------------------------
Confidence 3 67899999995433111
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCC-CCccccCc-CchHHHHHhccCceeeEEecCCC
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEP-FPGWAEGI-RTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p-~~gw~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
...+.|+.+|+..+.+++.+ ..+++++++||+.++++.... .+...... ......+..+ ...+.
T Consensus 152 -~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 222 (262)
T PRK13394 152 -PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKV--------MLGKT 222 (262)
T ss_pred -CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHH--------HhcCC
Confidence 12457999999888887655 357999999999999875311 11110000 0011111111 12234
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...++++++|++++++.++....... . +..|++.++
T Consensus 223 ~~~~~~~~~dva~a~~~l~~~~~~~~-~-g~~~~~~~g 258 (262)
T PRK13394 223 VDGVFTTVEDVAQTVLFLSSFPSAAL-T-GQSFVVSHG 258 (262)
T ss_pred CCCCCCCHHHHHHHHHHHcCccccCC-c-CCEEeeCCc
Confidence 45689999999999999887432221 2 678988876
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=168.40 Aligned_cols=236 Identities=17% Similarity=0.165 Sum_probs=154.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. +. ...++..+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~~ 54 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGD---RVVATARDTAT---LADLA-------------EK--------YGDRLLPL 54 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------Hh--------ccCCeeEE
Confidence 578999999999999999999999986 56888886432 11111 11 12467888
Q ss_pred ecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhcc
Q 037479 91 PGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKCA 152 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~ 152 (492)
.+|+++ ++..+.++ .++|+|||+||.... .+.++..+++|+.++.++++.+ ++.
T Consensus 55 ~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 126 (275)
T PRK08263 55 ALDVTD-------RAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ- 126 (275)
T ss_pred EccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-
Confidence 999994 33333332 368999999997643 1467888999999998888776 333
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+.+++|++||...+... .
T Consensus 127 ~~~~iv~vsS~~~~~~~--------------------------------------------------------------~ 144 (275)
T PRK08263 127 RSGHIIQISSIGGISAF--------------------------------------------------------------P 144 (275)
T ss_pred CCCEEEEEcChhhcCCC--------------------------------------------------------------C
Confidence 45789999996555332 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..|++++++||+.+..+...+.............+..... .......
T Consensus 145 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 215 (275)
T PRK08263 145 MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELA---------EQWSERS 215 (275)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHH---------HHHHhcc
Confidence 2357999999988887654 3589999999998877654321111111111111111110 0011123
Q ss_pred e-eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHH
Q 037479 308 V-IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRY 358 (492)
Q Consensus 308 ~-v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~ 358 (492)
+ +.++|++++++.++... ... +..++.+.+ .++++.++.+.+.++
T Consensus 216 ~~~~p~dva~~~~~l~~~~-~~~---~~~~~~~~~--~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 216 VDGDPEAAAEALLKLVDAE-NPP---LRLFLGSGV--LDLAKADYERRLATW 261 (275)
T ss_pred CCCCHHHHHHHHHHHHcCC-CCC---eEEEeCchH--HHHHHHHHHHHHHHH
Confidence 4 78999999999998742 221 344444444 578888988888775
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-18 Score=176.48 Aligned_cols=244 Identities=14% Similarity=0.089 Sum_probs=156.7
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+.+.|++||||||||+||++++++|++.|+ +|++++|..... +++..++.... +... + .....++
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~---~Vval~Rn~ekl---~~l~~~l~~~~----L~~~-G----a~~~~~v 140 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSAQRA---ESLVQSVKQMK----LDVE-G----TQPVEKL 140 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC---eEEEEeCCHHHH---HHHHHHhhhhc----cccc-c----ccccCce
Confidence 346789999999999999999999999996 458888875331 12111110000 0000 0 0001468
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
.++.||++ +.+.+..+++++|+|||+||..... ..+...+++|+.|+.+++++|++. ++++||++||.+++
T Consensus 141 ~iV~gDLt-------D~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~ 212 (576)
T PLN03209 141 EIVECDLE-------KPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTN 212 (576)
T ss_pred EEEEecCC-------CHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhc
Confidence 89999999 5555667789999999999875321 234566889999999999999987 78999999997653
Q ss_pred cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 167 GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 167 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
.... .+..+ .....|...|..+|+
T Consensus 213 ~~g~---p~~~~-----------------------------------------------------~sk~~~~~~KraaE~ 236 (576)
T PLN03209 213 KVGF---PAAIL-----------------------------------------------------NLFWGVLCWKRKAEE 236 (576)
T ss_pred ccCc---cccch-----------------------------------------------------hhHHHHHHHHHHHHH
Confidence 1110 00000 112457788999999
Q ss_pred HHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 247 FIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 247 ~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
.+.. .|+++++|||+.+.++..+.. .. +.......+ ......+..+|||++++.++.+..
T Consensus 237 ~L~~--sGIrvTIVRPG~L~tp~d~~~----~t-------------~~v~~~~~d-~~~gr~isreDVA~vVvfLasd~~ 296 (576)
T PLN03209 237 ALIA--SGLPYTIVRPGGMERPTDAYK----ET-------------HNLTLSEED-TLFGGQVSNLQVAELMACMAKNRR 296 (576)
T ss_pred HHHH--cCCCEEEEECCeecCCccccc----cc-------------cceeecccc-ccCCCccCHHHHHHHHHHHHcCch
Confidence 8876 789999999999987643210 00 011010111 111235788999999999887433
Q ss_pred cCCCCCCcEEEecCCCCCc-ccHHHHHH
Q 037479 327 KQPSDVNNIYQVGSSLRNP-LIYTNLQD 353 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~-~t~~e~~~ 353 (492)
... +.+|.+.++...| ..+.+++.
T Consensus 297 as~---~kvvevi~~~~~p~~~~~~~~~ 321 (576)
T PLN03209 297 LSY---CKVVEVIAETTAPLTPMEELLA 321 (576)
T ss_pred hcc---ceEEEEEeCCCCCCCCHHHHHH
Confidence 222 6889988873222 33444443
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.7e-18 Score=162.61 Aligned_cols=220 Identities=14% Similarity=0.121 Sum_probs=141.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.+++||||||+||||++++++|++.|+ +|+++.|+... ..+.+..+ +... ....+.+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~---~v~~~~r~~~~--~~~~~~~~---------~~~~--------~~~~~~~ 61 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGY---RVAIHYHRSAA--EADALAAE---------LNAL--------RPGSAAA 61 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHH---------HHhh--------cCCceEE
Confidence 3568999999999999999999999986 45888886432 11111110 1111 0145788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--K 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~ 153 (492)
+.+|++ +.+....+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.+.- .
T Consensus 62 ~~~Dl~-------~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 134 (249)
T PRK09135 62 LQADLL-------DPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ 134 (249)
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC
Confidence 999999 4444434443 58999999996421 23467789999999999999986531 1
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-..++.+|+. .+.. + ..+
T Consensus 135 ~~~~~~~~~~--~~~~-------~-----------------------------------------------------~~~ 152 (249)
T PRK09135 135 RGAIVNITDI--HAER-------P-----------------------------------------------------LKG 152 (249)
T ss_pred CeEEEEEeCh--hhcC-------C-----------------------------------------------------CCC
Confidence 1244444431 1110 1 134
Q ss_pred CchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHH-hccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAV-GYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~d~ 308 (492)
.+.|+.||+.+|.+++.+ ..+++++++||+.++|+...+ ++ . .... ....+.. ..-+
T Consensus 153 ~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~--~~----~---~~~~~~~~~~~~---------~~~~ 214 (249)
T PRK09135 153 YPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN--SF----D---EEARQAILARTP---------LKRI 214 (249)
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc--cC----C---HHHHHHHHhcCC---------cCCC
Confidence 578999999999999875 246999999999999987532 11 1 1111 1111110 1112
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++|+|+++..++....... +++||++++
T Consensus 215 ~~~~d~a~~~~~~~~~~~~~~---g~~~~i~~g 244 (249)
T PRK09135 215 GTPEDIAEAVRFLLADASFIT---GQILAVDGG 244 (249)
T ss_pred cCHHHHHHHHHHHcCcccccc---CcEEEECCC
Confidence 358999999966664322112 889999998
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-18 Score=163.68 Aligned_cols=225 Identities=14% Similarity=0.125 Sum_probs=146.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++||||||||+||++++++|++.|+ +|+++.|+... .+.+.+++ .. ...++..+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~---~v~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~~~ 56 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA---NVVVNDLGEAG---AEAAAKVA---------TD---------AGGSVIYLV 56 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hh---------cCCceEEEE
Confidence 47899999999999999999999996 56888886432 12221111 00 124688899
Q ss_pred cCCCCCCCCCCchhhH-------HHhccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hccc
Q 037479 92 GDITREDLGVKDSNLR-------EEMWNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK----KCAK 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~-------~~~~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~~ 153 (492)
+|+++ .+.. ...+.++|+|||+|+.... .+.++..+++|+.|+..+++.+. +. +
T Consensus 57 ~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~ 128 (255)
T TIGR01963 57 ADVTK-------EDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-G 128 (255)
T ss_pred CCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-C
Confidence 99994 3322 2233568999999997542 13456778899999988888773 33 5
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
.++||++||...+... ..
T Consensus 129 ~~~~v~~ss~~~~~~~--------------------------------------------------------------~~ 146 (255)
T TIGR01963 129 WGRIINIASAHGLVAS--------------------------------------------------------------PF 146 (255)
T ss_pred CeEEEEEcchhhcCCC--------------------------------------------------------------CC
Confidence 6799999986544321 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCC-CC-ccc-cCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEP-FP-GWA-EGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p-~~-gw~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.+.|+.+|...|.+++.+ ..+++++++||+.++++.... ++ .+. .... ....+.. ....+...
T Consensus 147 ~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~ 217 (255)
T TIGR01963 147 KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIP-EEQVIRE--------VMLPGQPT 217 (255)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCC-chHHHHH--------HHHccCcc
Confidence 357999999888887654 248999999999998875311 11 000 0000 0000000 01123345
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++++++|+|++++.++....... . ++.|+++++
T Consensus 218 ~~~~~~~d~a~~~~~~~~~~~~~~-~-g~~~~~~~g 251 (255)
T TIGR01963 218 KRFVTVDEVAETALFLASDAAAGI-T-GQAIVLDGG 251 (255)
T ss_pred ccCcCHHHHHHHHHHHcCccccCc-c-ceEEEEcCc
Confidence 579999999999999987432221 1 788999876
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-18 Score=157.92 Aligned_cols=260 Identities=18% Similarity=0.186 Sum_probs=187.1
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHH-HHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATV-RFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~-r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+|+.||||-||+-|++|++.||+.|++| +.+.|+.+..+... ++. ..+. ....++..+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~V---hGi~Rrss~~n~~ri~L~----~~~~--------------~~~~~l~l~ 60 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEV---HGIKRRSSSFNTPRIHLY----EDPH--------------LNDPRLHLH 60 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEE---EEEeeccccCCcccceec----cccc--------------cCCceeEEE
Confidence 6899999999999999999999999866 89998754432210 111 1111 113568899
Q ss_pred ecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhccc-ceeEEEeeece
Q 037479 91 PGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAK-LIVLVHVSTAF 164 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~V~vST~~ 164 (492)
.||++ |...+.++++ ++|-|+|+||..+.. +.+....+++..||.++|++.+.... -.+|.+.||.-
T Consensus 61 ~gDLt-------D~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE 133 (345)
T COG1089 61 YGDLT-------DSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSE 133 (345)
T ss_pred ecccc-------chHHHHHHHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHH
Confidence 99999 5555557766 789999999975322 34456688999999999999998743 34899999999
Q ss_pred eecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 165 VWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 165 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
.+|... |.+..+ ..+..|.++|+.+|..|
T Consensus 134 ~fG~v~----~~pq~E-----------------------------------------------~TPFyPrSPYAvAKlYa 162 (345)
T COG1089 134 LYGLVQ----EIPQKE-----------------------------------------------TTPFYPRSPYAVAKLYA 162 (345)
T ss_pred hhcCcc----cCcccc-----------------------------------------------CCCCCCCCHHHHHHHHH
Confidence 898642 212111 11346789999999999
Q ss_pred HHHHHHhc--CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEE-ecCCCcccceeehhhhhhHHHHH
Q 037479 245 EMFIEHLK--ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF-LGDVKGIVDVIPADMVVNAIVVA 321 (492)
Q Consensus 245 E~~v~~~~--~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~d~v~vddva~~ii~~ 321 (492)
-.+...|. .|+-.+. ++.+ ..+.|.-|-.---+.++..+..+..|....+ .|+-+..+||-++.|-++++..+
T Consensus 163 ~W~tvNYResYgl~Acn---GILF-NHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlm 238 (345)
T COG1089 163 YWITVNYRESYGLFACN---GILF-NHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLM 238 (345)
T ss_pred HheeeehHhhcCceeec---ceee-cCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHH
Confidence 99888773 3544332 2223 2333433322222556666777777776554 59999999999999999999999
Q ss_pred HHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 322 VVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 322 ~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+.+.. ++.|.++++ ...|++|+++...+..|..
T Consensus 239 LQq~~------PddyViATg--~t~sVrefv~~Af~~~g~~ 271 (345)
T COG1089 239 LQQEE------PDDYVIATG--ETHSVREFVELAFEMVGID 271 (345)
T ss_pred HccCC------CCceEEecC--ceeeHHHHHHHHHHHcCce
Confidence 87432 567999999 8899999999999988843
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.7e-18 Score=161.53 Aligned_cols=221 Identities=15% Similarity=0.125 Sum_probs=149.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||++|++++++|++.|+ +|++++|+.... +... ..++.. ..++.+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~---~V~~~~r~~~~~---~~~~---------~~l~~~---------~~~~~~ 59 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGA---EVIVVDICGDDA---AATA---------ELVEAA---------GGKARA 59 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHH---------HHHHhc---------CCeEEE
Confidence 4678999999999999999999999996 568888874321 1111 111111 145888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ .+|+|||+||.... .+.+...+++|+.++.++++.+... .
T Consensus 60 ~~~Dl~-------~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (251)
T PRK12826 60 RQVDVR-------DRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA 132 (251)
T ss_pred EECCCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 999999 4444444443 68999999987653 1345778999999999999987431 2
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+.++||++||...++... .
T Consensus 133 ~~~~ii~~ss~~~~~~~~-------------------------------------------------------------~ 151 (251)
T PRK12826 133 GGGRIVLTSSVAGPRVGY-------------------------------------------------------------P 151 (251)
T ss_pred CCcEEEEEechHhhccCC-------------------------------------------------------------C
Confidence 467899999965441100 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+.+|.++..+ ..+++++++||+.++|+...+... ..+...+..+ . ....
T Consensus 152 ~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--------~~~~~~~~~~----~-----~~~~ 214 (251)
T PRK12826 152 GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD--------AQWAEAIAAA----I-----PLGR 214 (251)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc--------hHHHHHHHhc----C-----CCCC
Confidence 2457999999999888765 248999999999999986533211 0001111111 0 1115
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+|+++..++....... . +++|++.++
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~~-~-g~~~~~~~g 246 (251)
T PRK12826 215 LGEPEDIAAAVLFLASDEARYI-T-GQTLPVDGG 246 (251)
T ss_pred CcCHHHHHHHHHHHhCccccCc-C-CcEEEECCC
Confidence 7899999999988775332221 2 789999886
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-17 Score=158.15 Aligned_cols=219 Identities=17% Similarity=0.185 Sum_probs=147.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||++|++|+.+|++.|++ |.+++|+... ..+.+.+. +.. ...++.+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~---v~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~~~ 60 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGAD---VVVHYRSDEE--AAEELVEA---------VEA---------LGRRAQA 60 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCCHH--HHHHHHHH---------HHh---------cCCceEE
Confidence 35689999999999999999999999974 3566665432 11111110 000 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK----KC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~ 151 (492)
+.+|+++ .+....++ .++|+|||+||.... .+.+...+++|+.++.++++.+. +.
T Consensus 61 ~~~D~~~-------~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (249)
T PRK12825 61 VQADVTD-------KAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ 133 (249)
T ss_pred EECCcCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999994 44333333 468999999996532 23457789999999999998873 33
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+.++||++||...+...
T Consensus 134 -~~~~~i~~SS~~~~~~~-------------------------------------------------------------- 150 (249)
T PRK12825 134 -RGGRIVNISSVAGLPGW-------------------------------------------------------------- 150 (249)
T ss_pred -CCCEEEEECccccCCCC--------------------------------------------------------------
Confidence 56899999997665321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.+|+..|.++..+ ..+++++++||+.++++...+.. ....... .. .....
T Consensus 151 ~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~--------~~~~~~~----~~------~~~~~ 212 (249)
T PRK12825 151 PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI--------EEAREAK----DA------ETPLG 212 (249)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc--------chhHHhh----hc------cCCCC
Confidence 12357999999998888654 25899999999999998653311 0111110 00 01122
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+++++..++....... . +++|+++++
T Consensus 213 ~~~~~~dva~~~~~~~~~~~~~~-~-g~~~~i~~g 245 (249)
T PRK12825 213 RSGTPEDIARAVAFLCSDASDYI-T-GQVIEVTGG 245 (249)
T ss_pred CCcCHHHHHHHHHHHhCccccCc-C-CCEEEeCCC
Confidence 38999999999988886432222 2 889999987
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.4e-18 Score=163.04 Aligned_cols=228 Identities=14% Similarity=0.090 Sum_probs=145.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||||++|++++++|++.|+ +|+++.|+.... +++..++ +. ...++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~---~v~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 57 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGA---KVVIADLNDEAA---AAAAEAL---------QK---------AGGKAIG 57 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcEEE
Confidence 4678999999999999999999999996 458888865321 1211111 11 1256888
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHH----Hhc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFS----KKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (492)
+.+|+++ .+....++ ..+|+|||+|+..... +.+...+++|+.|+.++++.+ ++.
T Consensus 58 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (258)
T PRK12429 58 VAMDVTD-------EEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ 130 (258)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 9999994 44333433 3689999999965432 345667889999966555544 443
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+.++||++||.......
T Consensus 131 -~~~~iv~iss~~~~~~~-------------------------------------------------------------- 147 (258)
T PRK12429 131 -GGGRIINMASVHGLVGS-------------------------------------------------------------- 147 (258)
T ss_pred -CCeEEEEEcchhhccCC--------------------------------------------------------------
Confidence 57899999986544221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-CccccCcC-chHHHHHhccCceeeEEecCCCc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-PGWAEGIR-TIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~gw~~~~~-~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
...+.|+.+|+..+.+.+.+ ..++.+.++||+.+.++...+. +.-..... ......... ......
T Consensus 148 ~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 219 (258)
T PRK12429 148 AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDV--------LLPLVP 219 (258)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHH--------HhccCC
Confidence 12457888998888777644 3579999999999998764211 00000000 000111000 111222
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..++++++|+|+++..++........ ++.|++.++
T Consensus 220 ~~~~~~~~d~a~~~~~l~~~~~~~~~--g~~~~~~~g 254 (258)
T PRK12429 220 QKRFTTVEEIADYALFLASFAAKGVT--GQAWVVDGG 254 (258)
T ss_pred ccccCCHHHHHHHHHHHcCccccCcc--CCeEEeCCC
Confidence 34799999999999888864332221 678998876
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.3e-18 Score=163.99 Aligned_cols=227 Identities=15% Similarity=0.170 Sum_probs=148.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.++++|||||||+||.++++.|++.|+ +|+++.|+... .+.+. .+ ...++..
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 56 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGA---RVVIADIKPAR---ARLAA-------------LE--------IGPAAIA 56 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEcCCHHH---HHHHH-------------HH--------hCCceEE
Confidence 5679999999999999999999999996 45777775432 11111 01 1245788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+..+.++ .++|++||+||.... .+.++..+++|+.++.++++++....
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (257)
T PRK07067 57 VSLDVTR-------QDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQ 129 (257)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 9999994 33333433 368999999997532 14567889999999999999986531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.-.++|++||.......
T Consensus 130 ~~~~~iv~~sS~~~~~~~-------------------------------------------------------------- 147 (257)
T PRK07067 130 GRGGKIINMASQAGRRGE-------------------------------------------------------------- 147 (257)
T ss_pred CCCcEEEEeCCHHhCCCC--------------------------------------------------------------
Confidence 11379999985321110
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..+++++++||+.|.++..+............ ..+......+......
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 220 (257)
T PRK07067 148 ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENR-------PPGEKKRLVGEAVPLG 220 (257)
T ss_pred CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCC-------CHHHHHHHHhhcCCCC
Confidence 13467999999988887654 45899999999999987542211000000000 0000001112223345
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|++++.++....... . +.+|++.++
T Consensus 221 ~~~~~~dva~~~~~l~s~~~~~~-~-g~~~~v~gg 253 (257)
T PRK07067 221 RMGVPDDLTGMALFLASADADYI-V-AQTYNVDGG 253 (257)
T ss_pred CccCHHHHHHHHHHHhCcccccc-c-CcEEeecCC
Confidence 78999999999999887432222 1 789999887
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=160.33 Aligned_cols=240 Identities=17% Similarity=0.212 Sum_probs=156.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||+++++.|++.|+ +|+++.|+.... +.+.+++ .... ...++.+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~---~V~~~~r~~~~~---~~~~~~l---------~~~~-------~~~~~~~ 62 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA---AVMIVGRNPDKL---AAAAEEI---------EALK-------GAGAVRY 62 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCHHHH---HHHHHHH---------Hhcc-------CCCceEE
Confidence 6789999999999999999999999997 458888864321 1111111 1000 0146788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.+...+++|+.|+.++++.+.+..
T Consensus 63 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (276)
T PRK05875 63 EPADVTD-------EDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVR 135 (276)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999994 333334443 68999999985421 13456788999999999998775431
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.+||++||..+....
T Consensus 136 ~~~g~iv~~sS~~~~~~~-------------------------------------------------------------- 153 (276)
T PRK05875 136 GGGGSFVGISSIAASNTH-------------------------------------------------------------- 153 (276)
T ss_pred cCCcEEEEEechhhcCCC--------------------------------------------------------------
Confidence 23489999996654221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.+.+.|+.+|+..|.+++.+ ..+++++++||+.+.++..... .........+.. .....
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~-------~~~~~~~~~~~~---------~~~~~ 217 (276)
T PRK05875 154 RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI-------TESPELSADYRA---------CTPLP 217 (276)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc-------ccCHHHHHHHHc---------CCCCC
Confidence 23468999999999999865 3579999999998876543211 000111111110 01112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcc----cHHHHHHHHHHHhh
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPL----IYTNLQDYAYRYFT 360 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~----t~~e~~~~~~~~~~ 360 (492)
.++.++|+|+++..++....... . +++|+++++ ..+ +..|+.+.+....+
T Consensus 218 ~~~~~~dva~~~~~l~~~~~~~~-~-g~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 218 RVGEVEDVANLAMFLLSDAASWI-T-GQVINVDGG--HMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred CCcCHHHHHHHHHHHcCchhcCc-C-CCEEEECCC--eeccCCccHHHHHHHHhhHHH
Confidence 35679999999999887433221 1 789999987 444 66777766655443
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=160.33 Aligned_cols=221 Identities=14% Similarity=0.141 Sum_probs=143.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE-EecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLL-LRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l-vR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++++|+||||||+||+++++.|++.|+. |.++ .|+... .+... ..+... ..++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~---v~i~~~r~~~~---~~~~~---------~~~~~~---------~~~~~ 59 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGAL---VAIHYGRNKQA---ADETI---------REIESN---------GGKAF 59 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHH---------HHHHhc---------CCcEE
Confidence 45789999999999999999999999964 3443 454311 11111 111110 24678
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a 148 (492)
++.+|+++ .+....+++ ++|+|||+||.... .+.+...+++|+.|+.++++.+
T Consensus 60 ~~~~D~~d-------~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 132 (254)
T PRK12746 60 LIEADLNS-------IDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQT 132 (254)
T ss_pred EEEcCcCC-------HHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 89999994 333333333 58999999997432 1235677889999999999998
Q ss_pred Hhc-ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 149 KKC-AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 149 ~~~-~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
.+. .+..+||++||..++...
T Consensus 133 ~~~~~~~~~~v~~sS~~~~~~~---------------------------------------------------------- 154 (254)
T PRK12746 133 LPLLRAEGRVINISSAEVRLGF---------------------------------------------------------- 154 (254)
T ss_pred HHHhhcCCEEEEECCHHhcCCC----------------------------------------------------------
Confidence 763 233589999997665321
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..|.+++.+ ..++++++++|+.+.++...... .. ..+.....+ .
T Consensus 155 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~-----~~~~~~~~~--------~ 214 (254)
T PRK12746 155 ----TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLL---DD-----PEIRNFATN--------S 214 (254)
T ss_pred ----CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhc---cC-----hhHHHHHHh--------c
Confidence 12457999999999987655 35799999999999876542110 00 001111111 1
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+++++|+|+++..++....... . +++|++.++
T Consensus 215 ~~~~~~~~~~dva~~~~~l~~~~~~~~-~-g~~~~i~~~ 251 (254)
T PRK12746 215 SVFGRIGQVEDIADAVAFLASSDSRWV-T-GQIIDVSGG 251 (254)
T ss_pred CCcCCCCCHHHHHHHHHHHcCcccCCc-C-CCEEEeCCC
Confidence 112356789999999987776432211 1 789999875
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9e-18 Score=163.13 Aligned_cols=228 Identities=20% Similarity=0.169 Sum_probs=144.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|+++++|||||||++|++++++|+++|+ +|+++.|+..... .+..++ ... + ...++.+
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~---~V~~~~r~~~~~~---~~~~~~---------~~~-~------~~~~~~~ 58 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGY---LVIATMRNPEKQE---NLLSQA---------TQL-N------LQQNIKV 58 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCC---EEEEEeCCHHHHH---HHHHHH---------Hhc-C------CCCceeE
Confidence 4678999999999999999999999996 4588888643221 111000 000 0 0246889
Q ss_pred EecCCCCCCCCCCchhhHHH------hccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhcc
Q 037479 90 VPGDITREDLGVKDSNLREE------MWNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKCA 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~------~~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~ 152 (492)
+.+|++++ +..+. .+.++|+|||+||.... .+.+...+++|+.|+.++++.+ ++.
T Consensus 59 ~~~D~~d~-------~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 130 (280)
T PRK06914 59 QQLDVTDQ-------NSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ- 130 (280)
T ss_pred EecCCCCH-------HHHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-
Confidence 99999953 32222 22468999999986542 1456677899999999988886 333
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||....... .
T Consensus 131 ~~~~iv~vsS~~~~~~~--------------------------------------------------------------~ 148 (280)
T PRK06914 131 KSGKIINISSISGRVGF--------------------------------------------------------------P 148 (280)
T ss_pred CCCEEEEECcccccCCC--------------------------------------------------------------C
Confidence 46789999986433211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCc----CchHHHHHhccCceeeEEecCCC
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGI----RTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~----~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
..+.|+.||+..|.+++.+ ..+++++++||+.+.++...+........ ......+..+.. .. ..
T Consensus 149 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~ 221 (280)
T PRK06914 149 GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK----HI---NS 221 (280)
T ss_pred CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH----HH---hh
Confidence 3457999999999888765 34899999999999887433211100000 000111111000 00 01
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+++++|+|++++.++.+... ...|+++++
T Consensus 222 ~~~~~~~~~dva~~~~~~~~~~~~-----~~~~~~~~~ 254 (280)
T PRK06914 222 GSDTFGNPIDVANLIVEIAESKRP-----KLRYPIGKG 254 (280)
T ss_pred hhhccCCHHHHHHHHHHHHcCCCC-----CcccccCCc
Confidence 123568899999999999874221 346888776
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3e-17 Score=156.64 Aligned_cols=217 Identities=19% Similarity=0.208 Sum_probs=145.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||||+||++++++|++.|+ +|+++.|+... .+++.+++ +.. ..++..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~vi~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 59 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGA---SVVVADINAEG---AERVAKQI---------VAD---------GGTAIA 59 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 4679999999999999999999999996 56888886432 12222111 110 135678
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhcc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF----------DERYDVALDLNTFGAKHVLNFSKKCA 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (492)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.+...+++|+.|+.++++++.+..
T Consensus 60 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (250)
T PRK07774 60 VQVDVSD-------PDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHM 132 (250)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 8999994 33332333 368999999996421 13456778999999999999887641
Q ss_pred ---cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 153 ---KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 153 ---~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
+.++||++||..++.
T Consensus 133 ~~~~~~~iv~~sS~~~~~-------------------------------------------------------------- 150 (250)
T PRK07774 133 AKRGGGAIVNQSSTAAWL-------------------------------------------------------------- 150 (250)
T ss_pred HHhCCcEEEEEecccccC--------------------------------------------------------------
Confidence 245899999976542
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
+.+.|+.||+..|.+++.+ ..++++++++|+.+..+..... .+..+...+.++..
T Consensus 151 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--------~~~~~~~~~~~~~~--------- 210 (250)
T PRK07774 151 ---YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV--------TPKEFVADMVKGIP--------- 210 (250)
T ss_pred ---CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc--------CCHHHHHHHHhcCC---------
Confidence 2357999999999988765 3479999999988876654221 11112222222111
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+..++|+|++++.++........ +++|++.++
T Consensus 211 ~~~~~~~~d~a~~~~~~~~~~~~~~~--g~~~~v~~g 245 (250)
T PRK07774 211 LSRMGTPEDLVGMCLFLLSDEASWIT--GQIFNVDGG 245 (250)
T ss_pred CCCCcCHHHHHHHHHHHhChhhhCcC--CCEEEECCC
Confidence 01235689999999888764322222 789999987
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-17 Score=158.49 Aligned_cols=228 Identities=13% Similarity=0.082 Sum_probs=150.3
Q ss_pred CCcccHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchh
Q 037479 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLN 80 (492)
Q Consensus 1 ~~~~~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~ 80 (492)
|+|..+ + +++|+||||||+|+||+.++++|++.|+ +|+++.|+... .+.+. +.++..
T Consensus 1 ~~~~~~-~-~~~k~vlItGa~g~iG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~i~~~------ 57 (255)
T PRK07523 1 MSLNLF-D-LTGRRALVTGSSQGIGYALAEGLAQAGA---EVILNGRDPAK---LAAAA---------ESLKGQ------ 57 (255)
T ss_pred CCcccc-C-CCCCEEEEECCcchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHH---------HHHHhc------
Confidence 445433 2 5789999999999999999999999997 45788886421 11111 111110
Q ss_pred hhccCceEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHH
Q 037479 81 ALISEKITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLN 146 (492)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~ 146 (492)
..++..+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++
T Consensus 58 ---~~~~~~~~~D~~~-------~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 127 (255)
T PRK07523 58 ---GLSAHALAFDVTD-------HDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQ 127 (255)
T ss_pred ---CceEEEEEccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 1357889999994 44344444 358999999997532 23457788999999999999
Q ss_pred HHHhc---ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhh
Q 037479 147 FSKKC---AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDL 223 (492)
Q Consensus 147 ~a~~~---~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (492)
++.+. .+..++|++||.......
T Consensus 128 ~~~~~~~~~~~g~iv~iss~~~~~~~------------------------------------------------------ 153 (255)
T PRK07523 128 AVARHMIARGAGKIINIASVQSALAR------------------------------------------------------ 153 (255)
T ss_pred HHHHHHHHhCCeEEEEEccchhccCC------------------------------------------------------
Confidence 88753 135689999985332110
Q ss_pred hccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEE
Q 037479 224 GIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298 (492)
Q Consensus 224 ~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~ 298 (492)
.....|+.+|...|.+++.+ ..++++.++||+.+.++...... . ...+...+..
T Consensus 154 --------~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~---~----~~~~~~~~~~------ 212 (255)
T PRK07523 154 --------PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALV---A----DPEFSAWLEK------ 212 (255)
T ss_pred --------CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhc---c----CHHHHHHHHh------
Confidence 23457999999999988765 35899999999999887542210 0 0111111111
Q ss_pred ecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 299 LGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 299 ~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
......+..++|+|++++.++......- . +.++++.++
T Consensus 213 ---~~~~~~~~~~~dva~~~~~l~~~~~~~~-~-G~~i~~~gg 250 (255)
T PRK07523 213 ---RTPAGRWGKVEELVGACVFLASDASSFV-N-GHVLYVDGG 250 (255)
T ss_pred ---cCCCCCCcCHHHHHHHHHHHcCchhcCc-c-CcEEEECCC
Confidence 0112246679999999998886432221 1 778998887
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5e-17 Score=157.64 Aligned_cols=212 Identities=17% Similarity=0.099 Sum_probs=137.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+++|+||||+|+||++++++|++.|+ +|+++.|+... .+.+. +. ...++..+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~l~-------------~~--------~~~~~~~~ 55 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH---RVVGTVRSEAA---RADFE-------------AL--------HPDRALAR 55 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC---EEEEEeCCHHH---HHHHH-------------hh--------cCCCeeEE
Confidence 468999999999999999999999996 56888886432 11111 11 12467889
Q ss_pred ecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 91 PGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
.+|+++ .+....+++ .+|+|||+||..... +.+...+++|+.|+.++++++... .+
T Consensus 56 ~~D~~d-------~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 128 (277)
T PRK06180 56 LLDVTD-------FDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR 128 (277)
T ss_pred EccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC
Confidence 999994 444434433 589999999976431 345677999999999999986431 14
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||....... ..
T Consensus 129 ~~~iv~iSS~~~~~~~--------------------------------------------------------------~~ 146 (277)
T PRK06180 129 RGHIVNITSMGGLITM--------------------------------------------------------------PG 146 (277)
T ss_pred CCEEEEEecccccCCC--------------------------------------------------------------CC
Confidence 5689999996543211 13
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-CccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-PGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
...|+.||+..|.+++.+ ..+++++++||+.|.++..... ...................... ... ...
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~ 220 (277)
T PRK06180 147 IGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQARE---AKS---GKQ 220 (277)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHH---hhc---cCC
Confidence 468999999999887765 2489999999999987653221 1000010100111111100000 001 123
Q ss_pred eeehhhhhhHHHHHHHh
Q 037479 308 VIPADMVVNAIVVAVVA 324 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~ 324 (492)
+..++|+|++++.++..
T Consensus 221 ~~~~~dva~~~~~~l~~ 237 (277)
T PRK06180 221 PGDPAKAAQAILAAVES 237 (277)
T ss_pred CCCHHHHHHHHHHHHcC
Confidence 56799999999998874
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.3e-17 Score=156.22 Aligned_cols=237 Identities=12% Similarity=0.083 Sum_probs=150.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|++..|+... .+.+. +.++.. ..++.+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~---~Vv~~~r~~~~---l~~~~---------~~l~~~---------~~~~~~ 59 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGA---RVVLGDVDKPG---LRQAV---------NHLRAE---------GFDVHG 59 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCeEEE
Confidence 6789999999999999999999999996 45777776422 11111 111111 145788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+....++ .++|+|||+||.... .+.++..+++|+.|+.++++.+....
T Consensus 60 ~~~Dv~d-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~ 132 (275)
T PRK05876 60 VMCDVRH-------REEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQ 132 (275)
T ss_pred EeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 9999994 44343433 358999999997532 14467788999999999998875321
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ ..++|++||...+...
T Consensus 133 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 150 (275)
T PRK05876 133 GTGGHVVFTASFAGLVPN-------------------------------------------------------------- 150 (275)
T ss_pred CCCCEEEEeCChhhccCC--------------------------------------------------------------
Confidence 2 3579999986544221
Q ss_pred CCCchHHHHHHH----HHHHHHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVM----GEMFIEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~----aE~~v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+. +|.+..++ ..++++++++|+.|.++........ . .............+......
T Consensus 151 ~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~ 221 (275)
T PRK05876 151 AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERI-R--------GAACAQSSTTGSPGPLPLQD 221 (275)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhh-c--------Cccccccccccccccccccc
Confidence 234689999996 66666555 4589999999999877643211000 0 00000000111223333455
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
++++++|||++++.++.+ ++.|.+.+ +..+..+.+...++..
T Consensus 222 ~~~~~~dva~~~~~ai~~--------~~~~~~~~----~~~~~~~~~~~~~~~~ 263 (275)
T PRK05876 222 DNLGVDDIAQLTADAILA--------NRLYVLPH----AASRASIRRRFERIDR 263 (275)
T ss_pred cCCCHHHHHHHHHHHHHc--------CCeEEecC----hhhHHHHHHHHHHHHH
Confidence 789999999999999873 44555543 3455555555554433
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.6e-17 Score=153.56 Aligned_cols=218 Identities=19% Similarity=0.203 Sum_probs=145.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+++|+||||||++|+++++.|++.|++ |+++.|+.... +.+..+ ++. ...++.++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~---v~~~~r~~~~~---~~~~~~---------~~~---------~~~~~~~~ 59 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK---VVIYDSNEEAA---EALAAE---------LRA---------AGGEARVL 59 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCChhHH---HHHHHH---------HHh---------cCCceEEE
Confidence 4689999999999999999999999974 68888874321 111111 110 12568889
Q ss_pred ecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 91 PGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
.+|+++ ++....++ ..+|+|||+||..... +.+...+++|+.++.++++.+... .+
T Consensus 60 ~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 132 (246)
T PRK05653 60 VFDVSD-------EAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR 132 (246)
T ss_pred EccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 999994 33333333 3579999999875431 345677999999999999888531 15
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
.++||++||....... ..
T Consensus 133 ~~~ii~~ss~~~~~~~--------------------------------------------------------------~~ 150 (246)
T PRK05653 133 YGRIVNISSVSGVTGN--------------------------------------------------------------PG 150 (246)
T ss_pred CcEEEEECcHHhccCC--------------------------------------------------------------CC
Confidence 6799999986432110 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.+|+..|.+++.+ ..+++++++||+.+.++...++. ......... . .....+
T Consensus 151 ~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~---------~~~~~~~~~-~--------~~~~~~ 212 (246)
T PRK05653 151 QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLP---------EEVKAEILK-E--------IPLGRL 212 (246)
T ss_pred CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh---------HHHHHHHHh-c--------CCCCCC
Confidence 457999999888877664 35899999999999887653211 011111110 0 111357
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+.++|+++++..++........ +++|+++++
T Consensus 213 ~~~~dva~~~~~~~~~~~~~~~--g~~~~~~gg 243 (246)
T PRK05653 213 GQPEEVANAVAFLASDAASYIT--GQVIPVNGG 243 (246)
T ss_pred cCHHHHHHHHHHHcCchhcCcc--CCEEEeCCC
Confidence 8889999999998864322222 789999886
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.9e-17 Score=154.53 Aligned_cols=225 Identities=18% Similarity=0.181 Sum_probs=146.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++++++|||||||+||++++++|++.|+ +|+++.|+... .+++.+++ +. ...++.+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~---~v~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 56 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGA---KVAVFDLNREA---AEKVAADI---------RA---------KGGNAQA 56 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 4689999999999999999999999986 45777776432 12222111 11 0246889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.++ .++|+|||+||.... .+.++..+++|+.++.++++.+... .
T Consensus 57 ~~~d~~-------~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (250)
T TIGR03206 57 FACDIT-------DRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER 129 (250)
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999 444443443 368999999986421 1335677999999999998877531 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+....
T Consensus 130 ~~~~ii~iss~~~~~~~~-------------------------------------------------------------- 147 (250)
T TIGR03206 130 GAGRIVNIASDAARVGSS-------------------------------------------------------------- 147 (250)
T ss_pred CCeEEEEECchhhccCCC--------------------------------------------------------------
Confidence 457899999976654321
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..+.+.+.+ ..+++++++||+.++++......++.. ....+...+..... ...
T Consensus 148 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---------~~~ 215 (250)
T TIGR03206 148 GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAE---NPEKLREAFTRAIP---------LGR 215 (250)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccC---ChHHHHHHHHhcCC---------ccC
Confidence 2357999998888777655 248999999999998875432211111 11111111111110 112
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|+++..++........ ++++++.++
T Consensus 216 ~~~~~dva~~~~~l~~~~~~~~~--g~~~~~~~g 247 (250)
T TIGR03206 216 LGQPDDLPGAILFFSSDDASFIT--GQVLSVSGG 247 (250)
T ss_pred CcCHHHHHHHHHHHcCcccCCCc--CcEEEeCCC
Confidence 45578999999998764332222 788988775
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-16 Score=153.13 Aligned_cols=223 Identities=16% Similarity=0.156 Sum_probs=146.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+.... +...++ ++ ...++..
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~~~---~~~~~~---------~~----------~~~~~~~ 57 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGA---RVVVADRDAEAA---ERVAAA---------IA----------AGGRAFA 57 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC---eEEEecCCHHHH---HHHHHH---------Hh----------cCCeEEE
Confidence 3689999999999999999999999986 558888864321 111101 10 0256889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK----KC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~ 151 (492)
+.+|+++ .+..+.++ .++|+|||+|+.... .+.+...+++|+.|+.++.+.+. +.
T Consensus 58 ~~~D~~~-------~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (252)
T PRK06138 58 RQGDVGS-------AEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ 130 (252)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc
Confidence 9999994 44443433 378999999997532 13456779999999987777653 33
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+.++||++||.......
T Consensus 131 -~~~~ii~~sS~~~~~~~-------------------------------------------------------------- 147 (252)
T PRK06138 131 -GGGSIVNTASQLALAGG-------------------------------------------------------------- 147 (252)
T ss_pred -CCeEEEEECChhhccCC--------------------------------------------------------------
Confidence 56789999996543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
...+.|+.+|+..+.+++.+ ..+++++++||+.+.++.......+... ... +.....+. ....
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~---~~~-~~~~~~~~--------~~~~ 215 (252)
T PRK06138 148 RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHAD---PEA-LREALRAR--------HPMN 215 (252)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccC---hHH-HHHHHHhc--------CCCC
Confidence 12467999999999988765 2489999999999988765332221111 111 11111110 1112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|++++++.++....... . +..+.+.++
T Consensus 216 ~~~~~~d~a~~~~~l~~~~~~~~-~-g~~~~~~~g 248 (252)
T PRK06138 216 RFGTAEEVAQAALFLASDESSFA-T-GTTLVVDGG 248 (252)
T ss_pred CCcCHHHHHHHHHHHcCchhcCc-c-CCEEEECCC
Confidence 36889999999999887533221 1 667777654
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.8e-17 Score=155.65 Aligned_cols=221 Identities=14% Similarity=0.169 Sum_probs=143.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
..+|+++||||+|+||++++++|++.|. +|+++.|+... .+.+. +.++.. ..++..
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~---------~~~~~~ 63 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGF---PVALGARRVEK---CEELV---------DKIRAD---------GGEAVA 63 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCeEEE
Confidence 3457999999999999999999999996 45777775321 11111 111110 145788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+....++ .++|+|||+||.... .+.+...+++|+.|+.++++.+.+. .
T Consensus 64 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~ 136 (274)
T PRK07775 64 FPLDVTD-------PDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER 136 (274)
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 8999994 44343333 368999999997532 1345677899999999998887532 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||...+... .
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 154 (274)
T PRK07775 137 RRGDLIFVGSDVALRQR--------------------------------------------------------------P 154 (274)
T ss_pred CCceEEEECChHhcCCC--------------------------------------------------------------C
Confidence 34579999997554321 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..|.+++.+ ..+++++++||+.+.++...... . .....++..... . .......
T Consensus 155 ~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~---~--~~~~~~~~~~~~------~-~~~~~~~ 222 (274)
T PRK07775 155 HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLP---A--EVIGPMLEDWAK------W-GQARHDY 222 (274)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCC---h--hhhhHHHHHHHH------h-ccccccc
Confidence 2357999999999998866 24899999999877554321110 0 111111111110 0 0112346
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGS 340 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~ 340 (492)
++++||+|++++.++.... . +.+||+.-
T Consensus 223 ~~~~~dva~a~~~~~~~~~---~--~~~~~~~~ 250 (274)
T PRK07775 223 FLRASDLARAITFVAETPR---G--AHVVNMEV 250 (274)
T ss_pred ccCHHHHHHHHHHHhcCCC---C--CCeeEEee
Confidence 8999999999999887421 1 56888764
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-17 Score=156.91 Aligned_cols=225 Identities=16% Similarity=0.111 Sum_probs=144.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++|||||||||++++++|++.|++ |+++.|+... ..+.+.++ +.. ...++..
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~---V~~~~r~~~~--~~~~~~~~---------l~~---------~~~~~~~ 60 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAH---VVVNYRQKAP--RANKVVAE---------IEA---------AGGRASA 60 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCE---EEEEeCCchH--hHHHHHHH---------HHh---------cCCceEE
Confidence 46799999999999999999999999964 5778886431 11222111 111 0245788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcc-cceeEEEe
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCA-KLIVLVHV 160 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~V~v 160 (492)
+.+|+++ .+....++ .++|+|||+|+.... ...+...+++|+.|+.++++.+.+.. ...++|++
T Consensus 61 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~i 133 (248)
T PRK07806 61 VGADLTD-------EESVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFV 133 (248)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEE
Confidence 9999995 33333333 368999999986422 22345678899999999999998742 22489999
Q ss_pred eeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 161 STAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 161 ST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
||........ . ... .....|+.|
T Consensus 134 sS~~~~~~~~---~-~~~-----------------------------------------------------~~~~~Y~~s 156 (248)
T PRK07806 134 TSHQAHFIPT---V-KTM-----------------------------------------------------PEYEPVARS 156 (248)
T ss_pred eCchhhcCcc---c-cCC-----------------------------------------------------ccccHHHHH
Confidence 9853321100 0 000 113589999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhh
Q 037479 241 KVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVV 315 (492)
Q Consensus 241 K~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva 315 (492)
|+.+|.+++.+ ..++++++++|+.+-++....+. .. .....+.. . . .....+++++|+|
T Consensus 157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~---~~--~~~~~~~~-----~-~-----~~~~~~~~~~dva 220 (248)
T PRK07806 157 KRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLL---NR--LNPGAIEA-----R-R-----EAAGKLYTVSEFA 220 (248)
T ss_pred HHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhh---cc--CCHHHHHH-----H-H-----hhhcccCCHHHHH
Confidence 99999998875 35799999998877654321100 00 00010000 0 0 0113689999999
Q ss_pred hHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 316 NAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 316 ~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++++.++... ... +++|+++++
T Consensus 221 ~~~~~l~~~~-~~~---g~~~~i~~~ 242 (248)
T PRK07806 221 AEVARAVTAP-VPS---GHIEYVGGA 242 (248)
T ss_pred HHHHHHhhcc-ccC---ccEEEecCc
Confidence 9999999732 222 889999987
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7e-17 Score=154.63 Aligned_cols=219 Identities=18% Similarity=0.176 Sum_probs=144.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|+||||||+||++++++|++.|+ +|+++.|+.... .+... ..++. ...++.++.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~---~vi~~~r~~~~~--~~~~~---------~~~~~---------~~~~~~~~~ 58 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGF---DLAINDRPDDEE--LAATQ---------QELRA---------LGVEVIFFP 58 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecCchhH--HHHHH---------HHHHh---------cCCceEEEE
Confidence 47899999999999999999999986 457777764321 11111 01111 024688999
Q ss_pred cCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc----
Q 037479 92 GDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF---------DERYDVALDLNTFGAKHVLNFSKKC---- 151 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (492)
+|++++ +....++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 59 ~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 131 (256)
T PRK12745 59 ADVADL-------SAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQ 131 (256)
T ss_pred ecCCCH-------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhc
Confidence 999953 3222322 468999999987431 1456778999999999998887542
Q ss_pred cc-----ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 152 AK-----LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 152 ~~-----~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
.+ ..+||++||.......
T Consensus 132 ~~~~~~~~~~iv~~sS~~~~~~~--------------------------------------------------------- 154 (256)
T PRK12745 132 PEPEELPHRSIVFVSSVNAIMVS--------------------------------------------------------- 154 (256)
T ss_pred cCcCCCCCcEEEEECChhhccCC---------------------------------------------------------
Confidence 11 4679999996554221
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~ 301 (492)
.....|+.+|+..|.+++.+ ..+++++++||+.+.++...+. .+. ....+..+.
T Consensus 155 -----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~---~~~------~~~~~~~~~------- 213 (256)
T PRK12745 155 -----PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV---TAK------YDALIAKGL------- 213 (256)
T ss_pred -----CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc---chh------HHhhhhhcC-------
Confidence 13467999999999988766 3589999999999988654221 111 111111111
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+.+++|+++++..++....... . +.+|++.++
T Consensus 214 -~~~~~~~~~~d~a~~i~~l~~~~~~~~-~-G~~~~i~gg 250 (256)
T PRK12745 214 -VPMPRWGEPEDVARAVAALASGDLPYS-T-GQAIHVDGG 250 (256)
T ss_pred -CCcCCCcCHHHHHHHHHHHhCCccccc-C-CCEEEECCC
Confidence 112356789999999988775322211 2 789999887
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.7e-17 Score=155.96 Aligned_cols=228 Identities=14% Similarity=0.138 Sum_probs=146.6
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
..++++++|||||+|+||++++++|++.|+ +|+++.|+... .+.+. ++.+ ..++
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~---~V~~~~r~~~~---~~~~~-------------~~~~-------~~~~ 60 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA---RVHVCDVSEAA---LAATA-------------ARLP-------GAKV 60 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHHh-------cCce
Confidence 447889999999999999999999999996 45888886432 11111 0100 1256
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc-
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC- 151 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (492)
.++.+|+++ ++.+..++ .++|+|||+||.... .+.+...+++|+.|+.++++.+.+.
T Consensus 61 ~~~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 133 (264)
T PRK12829 61 TATVADVAD-------PAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLL 133 (264)
T ss_pred EEEEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 889999994 44333333 478999999997621 1456788999999999998887431
Q ss_pred --ccc-eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 152 --AKL-IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 152 --~~~-~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
.+. +.|+++||.......
T Consensus 134 ~~~~~~~~vv~~ss~~~~~~~----------------------------------------------------------- 154 (264)
T PRK12829 134 KASGHGGVIIALSSVAGRLGY----------------------------------------------------------- 154 (264)
T ss_pred HhCCCCeEEEEecccccccCC-----------------------------------------------------------
Confidence 133 568888774322110
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccC-c-CchHHHHHhccCceeeEEecC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEG-I-RTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~-~-~~~~~~~~~~~~g~~~~~~~~ 301 (492)
+....|+.+|+..|.++... ..+++++++||+.++++........... . ............
T Consensus 155 ---~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 222 (264)
T PRK12829 155 ---PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLE--------- 222 (264)
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHh---------
Confidence 12346999999999888765 2489999999999998765321100000 0 000011111000
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
......+++++|+|+++..++....... . ++.|+++++
T Consensus 223 ~~~~~~~~~~~d~a~~~~~l~~~~~~~~-~-g~~~~i~~g 260 (264)
T PRK12829 223 KISLGRMVEPEDIAATALFLASPAARYI-T-GQAISVDGN 260 (264)
T ss_pred cCCCCCCCCHHHHHHHHHHHcCccccCc-c-CcEEEeCCC
Confidence 0112358999999999988875322111 2 789999887
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.1e-17 Score=155.68 Aligned_cols=222 Identities=17% Similarity=0.153 Sum_probs=145.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|.+++++||||||+||++++++|++.|++| +.++.|+... .+.+.++ ++. ...++.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v--~~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~ 58 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDI--AVNYARSRKA---AEETAEE---------IEA---------LGRKALA 58 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEE--EEEcCCCHHH---HHHHHHH---------HHh---------cCCeEEE
Confidence 457899999999999999999999999754 2234554321 1111111 111 1246788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ ++....+++ .+|+|||+||..... +.+...+++|+.|+.++++++... .
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (250)
T PRK08063 59 VKANVGD-------VEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV 131 (250)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999994 443334433 589999999864321 334567889999999999888753 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+.++||++||....... .
T Consensus 132 ~~g~iv~~sS~~~~~~~--------------------------------------------------------------~ 149 (250)
T PRK08063 132 GGGKIISLSSLGSIRYL--------------------------------------------------------------E 149 (250)
T ss_pred CCeEEEEEcchhhccCC--------------------------------------------------------------C
Confidence 34689999996443211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+++.+ ..++++++++|+.|..+.....+++ ..+...... . .....
T Consensus 150 ~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-------~~~~~~~~~-~--------~~~~~ 213 (250)
T PRK08063 150 NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-------EELLEDARA-K--------TPAGR 213 (250)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-------hHHHHHHhc-C--------CCCCC
Confidence 3458999999999998765 3589999999999976654322211 111111110 0 01124
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+|++++.++.+...... ++.+++.++
T Consensus 214 ~~~~~dva~~~~~~~~~~~~~~~--g~~~~~~gg 245 (250)
T PRK08063 214 MVEPEDVANAVLFLCSPEADMIR--GQTIIVDGG 245 (250)
T ss_pred CcCHHHHHHHHHHHcCchhcCcc--CCEEEECCC
Confidence 68899999999988864332221 788888876
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.1e-17 Score=153.74 Aligned_cols=219 Identities=16% Similarity=0.148 Sum_probs=144.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++||||||+||++++++|++.|+.| +++.|+... ..+.+. +.++.. ..++.+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v---~~~~~~~~~--~~~~~~---------~~l~~~---------~~~~~~ 60 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKV---VINYNSSKE--AAENLV---------NELGKE---------GHDVYA 60 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEE---EEEcCCcHH--HHHHHH---------HHHHhc---------CCeEEE
Confidence 468999999999999999999999999743 554443211 111111 111110 146888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+....+++ .+|+|||+||..... +.++..+++|+.++.++++.+... .
T Consensus 61 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (247)
T PRK12935 61 VQADVSK-------VEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA 133 (247)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999994 443434443 489999999975421 456788999999999999988653 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||.+..... .
T Consensus 134 ~~~~iv~~sS~~~~~~~--------------------------------------------------------------~ 151 (247)
T PRK12935 134 EEGRIISISSIIGQAGG--------------------------------------------------------------F 151 (247)
T ss_pred CCcEEEEEcchhhcCCC--------------------------------------------------------------C
Confidence 34589999995443211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+.+.+ ..++++++++|+.|.++.....+ .........+ ....+
T Consensus 152 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~---------~~~~~ 213 (247)
T PRK12935 152 GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP---------EEVRQKIVAK---------IPKKR 213 (247)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc---------HHHHHHHHHh---------CCCCC
Confidence 2357999999888776554 34899999999998765321111 1111111111 12236
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+.+++|++++++.++... ... . +++||+.++
T Consensus 214 ~~~~edva~~~~~~~~~~-~~~-~-g~~~~i~~g 244 (247)
T PRK12935 214 FGQADEIAKGVVYLCRDG-AYI-T-GQQLNINGG 244 (247)
T ss_pred CcCHHHHHHHHHHHcCcc-cCc-c-CCEEEeCCC
Confidence 789999999999988632 211 1 789999886
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.1e-17 Score=152.45 Aligned_cols=226 Identities=19% Similarity=0.219 Sum_probs=153.7
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|+||||||.+|+.+++.|++.++ +|.+++|+.+.. ..+.++ ..+++++.+|+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~---~V~~l~R~~~~~-~~~~l~------------------------~~g~~vv~~d~ 52 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF---SVRALVRDPSSD-RAQQLQ------------------------ALGAEVVEADY 52 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG---CEEEEESSSHHH-HHHHHH------------------------HTTTEEEES-T
T ss_pred CEEECCccHHHHHHHHHHHhCCC---CcEEEEeccchh-hhhhhh------------------------cccceEeeccc
Confidence 79999999999999999999775 569999987221 111222 25678899999
Q ss_pred CCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccccee
Q 037479 95 TREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLY 174 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~i~ 174 (492)
. +.+.+.++++++|+||.+-+... .. -.....+++++|++. ++++||+.|....+....+
T Consensus 53 ~-------~~~~l~~al~g~d~v~~~~~~~~-~~--------~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~~~--- 112 (233)
T PF05368_consen 53 D-------DPESLVAALKGVDAVFSVTPPSH-PS--------ELEQQKNLIDAAKAA-GVKHFVPSSFGADYDESSG--- 112 (233)
T ss_dssp T--------HHHHHHHHTTCSEEEEESSCSC-CC--------HHHHHHHHHHHHHHH-T-SEEEESEESSGTTTTTT---
T ss_pred C-------CHHHHHHHHcCCceEEeecCcch-hh--------hhhhhhhHHHhhhcc-ccceEEEEEeccccccccc---
Confidence 9 66777799999999998887543 11 134556799999998 7999997665333311100
Q ss_pred ccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHhcCC
Q 037479 175 ESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLKEN 254 (492)
Q Consensus 175 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~ 254 (492)
. .+....-..|...|+.+++ .+
T Consensus 113 --~------------------------------------------------------~p~~~~~~~k~~ie~~l~~--~~ 134 (233)
T PF05368_consen 113 --S------------------------------------------------------EPEIPHFDQKAEIEEYLRE--SG 134 (233)
T ss_dssp --S------------------------------------------------------TTHHHHHHHHHHHHHHHHH--CT
T ss_pred --c------------------------------------------------------cccchhhhhhhhhhhhhhh--cc
Confidence 0 1112344578889998888 58
Q ss_pred CcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCc-eeeEEecCCCccccee-ehhhhhhHHHHHHHhhhcCCCCC
Q 037479 255 MSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKG-RLTCFLGDVKGIVDVI-PADMVVNAIVVAVVAHAKQPSDV 332 (492)
Q Consensus 255 ~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~d~v-~vddva~~ii~~~~~~~~~~~~~ 332 (492)
++++++||++.+...-.+..++ ...... ....++++++....++ ..+|++++...++..+.....
T Consensus 135 i~~t~i~~g~f~e~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~-- 201 (233)
T PF05368_consen 135 IPYTIIRPGFFMENLLPPFAPV-----------VDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNN-- 201 (233)
T ss_dssp SEBEEEEE-EEHHHHHTTTHHT-----------TCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTE--
T ss_pred ccceeccccchhhhhhhhhccc-----------ccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcC--
Confidence 9999999998665443221111 011111 1235667777666675 999999999999986433212
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 333 NNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 333 ~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
++.+.+++ ..+|+.|+++.+.+.+|+.
T Consensus 202 ~~~~~~~~---~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 202 GKTIFLAG---ETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp EEEEEEGG---GEEEHHHHHHHHHHHHTSE
T ss_pred CEEEEeCC---CCCCHHHHHHHHHHHHCCc
Confidence 67888876 5799999999999999874
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=152.46 Aligned_cols=221 Identities=12% Similarity=0.101 Sum_probs=144.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++||||||+||||++++++|++.|++ +++..|+... ... + ....+++. ..++..+
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~---v~~~~~~~~~-----~~~-~-----~~~~~~~~---------~~~~~~~ 61 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSL---VVVNAKKRAE-----EMN-E-----TLKMVKEN---------GGEGIGV 61 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCChH-----HHH-H-----HHHHHHHc---------CCeeEEE
Confidence 4789999999999999999999999974 4566654321 111 0 01111110 1356788
Q ss_pred ecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-ccce
Q 037479 91 PGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-AKLI 155 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~ 155 (492)
.+|++++ +....++ .++|+|||+||.... .+.++..+++|+.|+.++++++.+. ....
T Consensus 62 ~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 134 (252)
T PRK06077 62 LADVSTR-------EGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGG 134 (252)
T ss_pred EeccCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCc
Confidence 8999953 3222332 468999999996322 1234677899999999999988753 1225
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
+||++||...+... .+.+
T Consensus 135 ~iv~~sS~~~~~~~--------------------------------------------------------------~~~~ 152 (252)
T PRK06077 135 AIVNIASVAGIRPA--------------------------------------------------------------YGLS 152 (252)
T ss_pred EEEEEcchhccCCC--------------------------------------------------------------CCch
Confidence 79999997654321 2346
Q ss_pred hHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 236 TYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
.|+.||+..|.+++.+ ..++.+.+++|+.|.++.......+... . ..... . .......++++
T Consensus 153 ~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~-~-~~~~~-~-----------~~~~~~~~~~~ 218 (252)
T PRK06077 153 IYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGM-S-EKEFA-E-----------KFTLMGKILDP 218 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccc-c-HHHHH-H-----------hcCcCCCCCCH
Confidence 8999999999988765 3479999999999977653221111100 0 00000 0 01112368999
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|+|++++.++... ... +++|++.++
T Consensus 219 ~dva~~~~~~~~~~-~~~---g~~~~i~~g 244 (252)
T PRK06077 219 EEVAEFVAAILKIE-SIT---GQVFVLDSG 244 (252)
T ss_pred HHHHHHHHHHhCcc-ccC---CCeEEecCC
Confidence 99999999988632 222 789999987
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=151.40 Aligned_cols=209 Identities=14% Similarity=0.144 Sum_probs=143.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+..... +.+. ++ ....+..
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~---~v~~~~r~~~~~~--~~~~-~~--------------------~~~~~~~ 58 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGA---RVALIGRGAAPLS--QTLP-GV--------------------PADALRI 58 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCC---eEEEEeCChHhHH--HHHH-HH--------------------hhcCceE
Confidence 5689999999999999999999999986 4688888653211 1111 00 0134567
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+.++.++ .++|+|||+|+.... .+.+...+++|+.++.++++++.+. .
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (239)
T PRK12828 59 GGIDLVD-------PQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS 131 (239)
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc
Confidence 7899984 33333333 368999999986432 1345677899999999998887532 2
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+.+++|++||...++.. .
T Consensus 132 ~~~~iv~~sS~~~~~~~--------------------------------------------------------------~ 149 (239)
T PRK12828 132 GGGRIVNIGAGAALKAG--------------------------------------------------------------P 149 (239)
T ss_pred CCCEEEEECchHhccCC--------------------------------------------------------------C
Confidence 56799999997655321 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..+.+++.. ..++++.++||+.|+++...... + ......
T Consensus 150 ~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~------------------------~--~~~~~~ 203 (239)
T PRK12828 150 GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM------------------------P--DADFSR 203 (239)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC------------------------C--chhhhc
Confidence 2357999999888777654 35899999999999987432100 0 000113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+|+++..++.+..... . ++.+++.++
T Consensus 204 ~~~~~dva~~~~~~l~~~~~~~-~-g~~~~~~g~ 235 (239)
T PRK12828 204 WVTPEQIAAVIAFLLSDEAQAI-T-GASIPVDGG 235 (239)
T ss_pred CCCHHHHHHHHHHHhCcccccc-c-ceEEEecCC
Confidence 7899999999998887432221 1 678888776
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.2e-16 Score=151.43 Aligned_cols=225 Identities=14% Similarity=0.188 Sum_probs=147.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++++++|||||||+||++++++|++.|.+ |.++.|+.... .+. ..+++. ..++.+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~---v~~~~r~~~~~----~~~---------~~~~~~---------~~~~~~ 59 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAI---PVIFGRSAPDD----EFA---------EELRAL---------QPRAEF 59 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCc---EEEEcCChhhH----HHH---------HHHHhc---------CCceEE
Confidence 67899999999999999999999999964 47778865432 111 111111 246889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC---cc---hhHHHHHHHhHHHHHHHHHHHHhcc--cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN---FD---ERYDVALDLNTFGAKHVLNFSKKCA--KL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~---~~---~~~~~~~~~Nv~gt~~ll~~a~~~~--~~ 154 (492)
+.+|+++ .+..+.++ .++|+|||+||... ++ +.+...+++|+.++.++.+.+.+.. +.
T Consensus 60 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 132 (258)
T PRK08628 60 VQVDLTD-------DAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASR 132 (258)
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccC
Confidence 9999995 33333333 36899999999532 11 4567789999999999988876421 23
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.+||++||....... ...
T Consensus 133 ~~iv~~ss~~~~~~~--------------------------------------------------------------~~~ 150 (258)
T PRK08628 133 GAIVNISSKTALTGQ--------------------------------------------------------------GGT 150 (258)
T ss_pred cEEEEECCHHhccCC--------------------------------------------------------------CCC
Confidence 579999985543211 134
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..|.+++.. ..+++++.++|+.|.++...+ |................ . .+. + ..++
T Consensus 151 ~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~-~---~~~-~---~~~~ 219 (258)
T PRK08628 151 SGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN---WIATFDDPEAKLAAITA-K---IPL-G---HRMT 219 (258)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH---HhhhccCHHHHHHHHHh-c---CCc-c---ccCC
Confidence 58999999999998865 347999999999999875322 22221111111111110 0 110 0 1467
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++|+|++++.++........ +..+.+.++
T Consensus 220 ~~~dva~~~~~l~~~~~~~~~--g~~~~~~gg 249 (258)
T PRK08628 220 TAEEIADTAVFLLSERSSHTT--GQWLFVDGG 249 (258)
T ss_pred CHHHHHHHHHHHhChhhcccc--CceEEecCC
Confidence 889999999998875332221 677777655
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-16 Score=151.19 Aligned_cols=231 Identities=16% Similarity=0.100 Sum_probs=153.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++++||||||+||+.+++.|++.|. +|+++.|+... .+.+..++ ...++..+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~---~v~~~~r~~~~---~~~~~~~~--------------------~~~~~~~~~ 55 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD---RVLALDIDAAA---LAAFADAL--------------------GDARFVPVA 55 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHh--------------------cCCceEEEE
Confidence 57999999999999999999999886 56888886432 11111000 024678899
Q ss_pred cCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---ccc
Q 037479 92 GDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKC---AKL 154 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~ 154 (492)
+|+++ .+....+++ ++|+|||+||..... +.+...+++|+.|+.++++.+... .+.
T Consensus 56 ~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 128 (257)
T PRK07074 56 CDLTD-------AASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSR 128 (257)
T ss_pred ecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 99994 443433333 589999999975321 334566789999999999888431 144
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.+||++||....... ..
T Consensus 129 ~~iv~~sS~~~~~~~---------------------------------------------------------------~~ 145 (257)
T PRK07074 129 GAVVNIGSVNGMAAL---------------------------------------------------------------GH 145 (257)
T ss_pred eEEEEEcchhhcCCC---------------------------------------------------------------CC
Confidence 689999985432110 11
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..|.+++.+ ..+++++++||+.+.++..... ......+...... .....+++
T Consensus 146 ~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~------~~~~~~~~~~~~~---------~~~~~~~~ 210 (257)
T PRK07074 146 PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEAR------VAANPQVFEELKK---------WYPLQDFA 210 (257)
T ss_pred cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcc------cccChHHHHHHHh---------cCCCCCCC
Confidence 36999999999888766 2479999999999877643110 0011111111111 11234789
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHH
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYR 357 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~ 357 (492)
+++|++++++.++....... . +.++++.++ ......|+.+.+.+
T Consensus 211 ~~~d~a~~~~~l~~~~~~~~-~-g~~~~~~~g--~~~~~~~~~~~~~~ 254 (257)
T PRK07074 211 TPDDVANAVLFLASPAARAI-T-GVCLPVDGG--LTAGNREMARTLTL 254 (257)
T ss_pred CHHHHHHHHHHHcCchhcCc-C-CcEEEeCCC--cCcCChhhhhhhcc
Confidence 99999999999986322222 1 788888888 77788898877643
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.9e-16 Score=152.44 Aligned_cols=223 Identities=13% Similarity=0.178 Sum_probs=147.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|++| ++..|+..... .+.+.+ .++. ...++.+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V---~i~~~~~~~~~-~~~~~~---------~~~~---------~~~~~~~ 110 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADI---ALNYLPEEEQD-AAEVVQ---------LIQA---------EGRKAVA 110 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEE---EEEeCCcchHH-HHHHHH---------HHHH---------cCCeEEE
Confidence 568999999999999999999999999754 55555433211 111110 1111 1246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc-cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN----F----DERYDVALDLNTFGAKHVLNFSKKC-AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (492)
+.+|+++ .+..+.++ .++|+|||+||... + .+.++..+++|+.|+.++++.+... ..
T Consensus 111 ~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 183 (300)
T PRK06128 111 LPGDLKD-------EAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP 183 (300)
T ss_pred EecCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc
Confidence 9999994 33333333 36899999999642 1 2457889999999999999998763 12
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||...+... ..
T Consensus 184 ~~~iv~~sS~~~~~~~--------------------------------------------------------------~~ 201 (300)
T PRK06128 184 GASIINTGSIQSYQPS--------------------------------------------------------------PT 201 (300)
T ss_pred CCEEEEECCccccCCC--------------------------------------------------------------CC
Confidence 2489999997665322 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+++.+ ..|+++.+++|+.|.++..... .. ....+..+..+ .....+
T Consensus 202 ~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~--~~-----~~~~~~~~~~~---------~p~~r~ 265 (300)
T PRK06128 202 LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG--GQ-----PPEKIPDFGSE---------TPMKRP 265 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC--CC-----CHHHHHHHhcC---------CCCCCC
Confidence 346999999999988765 3589999999999988754210 00 01111111111 112245
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+|++++++.++....... . +++|++.++
T Consensus 266 ~~p~dva~~~~~l~s~~~~~~-~-G~~~~v~gg 296 (300)
T PRK06128 266 GQPVEMAPLYVLLASQESSYV-T-GEVFGVTGG 296 (300)
T ss_pred cCHHHHHHHHHHHhCccccCc-c-CcEEeeCCC
Confidence 678999999988876432221 1 789999887
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.2e-16 Score=146.83 Aligned_cols=220 Identities=15% Similarity=0.124 Sum_probs=144.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC-CcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD-AKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~-~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++|+|+||||+|+||+++++.|++.|++ |+++.|... .....+.+.+ .+.. ...++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~---v~~~~~~~~~~~~~~~~~~~---------~~~~---------~~~~~~ 62 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGAD---VIVLDIHPMRGRAEADAVAA---------GIEA---------AGGKAL 62 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEcCcccccHHHHHHHHH---------HHHh---------cCCcEE
Confidence 46789999999999999999999999975 466665432 2111111111 1111 124688
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH-hc--
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK-KC-- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-~~-- 151 (492)
++.+|+++ .+..+.++ .++|+|||+||.... .+.+...+++|+.|+.++++++. .+
T Consensus 63 ~~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (249)
T PRK12827 63 GLAFDVRD-------FAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR 135 (249)
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 99999995 33333333 468999999997642 13467788999999999999987 21
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+.++||++||...+...
T Consensus 136 ~~~~~~iv~~sS~~~~~~~------------------------------------------------------------- 154 (249)
T PRK12827 136 ARRGGRIVNIASVAGVRGN------------------------------------------------------------- 154 (249)
T ss_pred cCCCeEEEEECCchhcCCC-------------------------------------------------------------
Confidence 255789999996554321
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.+|+..+.+++.+ ..+++++++||+.|.++...... ....+. .. ...
T Consensus 155 -~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--------~~~~~~---~~---------~~~ 213 (249)
T PRK12827 155 -RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--------PTEHLL---NP---------VPV 213 (249)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--------hHHHHH---hh---------CCC
Confidence 12357999999888887655 24899999999999987543211 001110 00 011
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+.+++|++++++.++....... . ++.+++.++
T Consensus 214 ~~~~~~~~va~~~~~l~~~~~~~~-~-g~~~~~~~g 247 (249)
T PRK12827 214 QRLGEPDEVAALVAFLVSDAASYV-T-GQVIPVDGG 247 (249)
T ss_pred cCCcCHHHHHHHHHHHcCcccCCc-c-CcEEEeCCC
Confidence 124588999999888875332222 1 678888765
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.6e-17 Score=154.21 Aligned_cols=229 Identities=16% Similarity=0.185 Sum_probs=148.0
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
|+++|+||||||||+||++++++|+++|+ +|+++.|+... .+.+.. .+... ..++.
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~---------~~~~~ 57 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGA---DVVLAARTAER---LDEVAA---------EIDDL---------GRRAL 57 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHH---------HHHHh---------CCceE
Confidence 56789999999999999999999999997 45788886432 111211 11110 24678
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
.+.+|+++ .+..+.++ .++|+|||+|+.... .+.+...+++|+.|+..+++++....
T Consensus 58 ~~~~D~~~-------~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 130 (258)
T PRK07890 58 AVPTDITD-------EDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALA 130 (258)
T ss_pred EEecCCCC-------HHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 89999994 33333333 468999999986421 14567889999999999999987531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
...+||++||.......
T Consensus 131 ~~~~~ii~~sS~~~~~~~-------------------------------------------------------------- 148 (258)
T PRK07890 131 ESGGSIVMINSMVLRHSQ-------------------------------------------------------------- 148 (258)
T ss_pred hCCCEEEEEechhhccCC--------------------------------------------------------------
Confidence 22489999986543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcC--chHHHHHhccCceeeEEecCCCc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIR--TIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~--~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
...+.|+.+|+..|.+++.+ ..++++.++||+.|+++...+......... ....+...+... ..
T Consensus 149 ~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 219 (258)
T PRK07890 149 PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SD 219 (258)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CC
Confidence 23467999999999988866 248999999999999975422111000000 001111111110 11
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+.+++|+|++++.++....... . ++++.+.++
T Consensus 220 ~~~~~~~~dva~a~~~l~~~~~~~~-~-G~~i~~~gg 254 (258)
T PRK07890 220 LKRLPTDDEVASAVLFLASDLARAI-T-GQTLDVNCG 254 (258)
T ss_pred ccccCCHHHHHHHHHHHcCHhhhCc-c-CcEEEeCCc
Confidence 2246789999999988886432211 1 666666655
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.5e-16 Score=150.20 Aligned_cols=226 Identities=16% Similarity=0.104 Sum_probs=141.2
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++|+++||||+|+||++++++|++.|+ +|+++.|+.. .+.+.++ +.. ...++.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~---~v~~~~r~~~----~~~~~~~---------~~~---------~~~~~~ 59 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGA---RVVLVDRSEL----VHEVAAE---------LRA---------AGGEAL 59 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCchH----HHHHHHH---------HHh---------cCCeEE
Confidence 37789999999999999999999999996 4577777532 1111111 111 024678
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc--
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN----F----DERYDVALDLNTFGAKHVLNFSKKC-- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (492)
++.+|++++ +....++ .++|++||+||... + .+.+...+++|+.|+..+++.+...
T Consensus 60 ~~~~D~~~~-------~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 132 (260)
T PRK12823 60 ALTADLETY-------AGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHML 132 (260)
T ss_pred EEEEeCCCH-------HHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 899999953 2222322 36899999998531 1 2346677899999988766655431
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..++|++||...++.
T Consensus 133 ~~~~g~iv~~sS~~~~~~-------------------------------------------------------------- 150 (260)
T PRK12823 133 AQGGGAIVNVSSIATRGI-------------------------------------------------------------- 150 (260)
T ss_pred hcCCCeEEEEcCccccCC--------------------------------------------------------------
Confidence 14468999999754421
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCc--cc-cCc-CchHHHHHhccCceeeEEecC
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPG--WA-EGI-RTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~g--w~-~~~-~~~~~~~~~~~~g~~~~~~~~ 301 (492)
....|+.||+..|.+++.+ ..++++.+++|+.|+++...-... +. +.. .....+...+..+..
T Consensus 151 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 222 (260)
T PRK12823 151 --NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSL------ 222 (260)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCC------
Confidence 1246999999999988765 348999999999999874210000 00 000 011122211111111
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+..++|+|++++.++....... . +.++++.++
T Consensus 223 ---~~~~~~~~dva~~~~~l~s~~~~~~-~-g~~~~v~gg 257 (260)
T PRK12823 223 ---MKRYGTIDEQVAAILFLASDEASYI-T-GTVLPVGGG 257 (260)
T ss_pred ---cccCCCHHHHHHHHHHHcCcccccc-c-CcEEeecCC
Confidence 1123468999999988876322211 1 778998776
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-16 Score=154.70 Aligned_cols=161 Identities=19% Similarity=0.215 Sum_probs=115.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||||+||++++++|++.|+ +|+++.|+... +. ++ ...++.+
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~~------l~-~~--------------------~~~~~~~ 50 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGY---TVYGAARRVDK------ME-DL--------------------ASLGVHP 50 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH------HH-HH--------------------HhCCCeE
Confidence 3579999999999999999999999996 55888886421 11 11 0135788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHH----HHHhc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLN----FSKKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~----~a~~~ 151 (492)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+..+++ .+++.
T Consensus 51 ~~~Dv~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 123 (273)
T PRK06182 51 LSLDVTD-------EASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ 123 (273)
T ss_pred EEeeCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc
Confidence 9999994 444444443 78999999997543 14567889999999655544 55544
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||.......
T Consensus 124 -~~g~iv~isS~~~~~~~-------------------------------------------------------------- 140 (273)
T PRK06182 124 -RSGRIINISSMGGKIYT-------------------------------------------------------------- 140 (273)
T ss_pred -CCCEEEEEcchhhcCCC--------------------------------------------------------------
Confidence 45689999995432111
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCC
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~ 270 (492)
.....|+.||+..+.+.+.. ..+++++++||+.|.++..
T Consensus 141 ~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 184 (273)
T PRK06182 141 PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG 184 (273)
T ss_pred CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence 12346999999999886533 3589999999999987643
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=151.38 Aligned_cols=222 Identities=15% Similarity=0.116 Sum_probs=145.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++||||||||++|++++++|++.|+ +|+++.|+.... +.+.+ .+.. ..++.+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~---~V~~~~r~~~~~---~~~~~---------~~~~----------~~~~~~ 57 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGA---RVVVTDRNEEAA---ERVAA---------EILA----------GGRAIA 57 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHH---------HHhc----------CCeEEE
Confidence 4689999999999999999999999996 468999975321 11110 0100 145788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+.+|+++ .+....+++ .+|+|||+|+.... .+.+...+++|+.|+.++++.+...
T Consensus 58 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 130 (251)
T PRK07231 58 VAADVSD-------EADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRG 130 (251)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 9999994 444444443 57999999996421 1346778999999988888776542
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+.++||++||...+...
T Consensus 131 ~~~~~iv~~sS~~~~~~~-------------------------------------------------------------- 148 (251)
T PRK07231 131 EGGGAIVNVASTAGLRPR-------------------------------------------------------------- 148 (251)
T ss_pred cCCcEEEEEcChhhcCCC--------------------------------------------------------------
Confidence 245789999997665432
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+++.+ ..+++++.++|+.+.++...... .. . .......... .....
T Consensus 149 ~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~-~-~~~~~~~~~~---------~~~~~ 214 (251)
T PRK07231 149 PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFM---GE-P-TPENRAKFLA---------TIPLG 214 (251)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhh---cc-c-ChHHHHHHhc---------CCCCC
Confidence 12357999998888777654 23899999999999665432111 00 0 0011111111 11123
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|.+++.++....... . +..+.+.++
T Consensus 215 ~~~~~~dva~~~~~l~~~~~~~~-~-g~~~~~~gg 247 (251)
T PRK07231 215 RLGTPEDIANAALFLASDEASWI-T-GVTLVVDGG 247 (251)
T ss_pred CCcCHHHHHHHHHHHhCccccCC-C-CCeEEECCC
Confidence 56899999999999886432222 1 667777765
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3e-16 Score=150.29 Aligned_cols=228 Identities=23% Similarity=0.209 Sum_probs=141.6
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
++++|+|+||||||+||++++++|++.|+ +|+++.|+.... +.+. ..+....+ ...+.
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g~---~v~~~~r~~~~~---~~~~---------~~l~~~~~-------~~~~~ 58 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAGG---IVIAADIDKEAL---NELL---------ESLGKEFK-------SKKLS 58 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecChHHH---HHHH---------HHHHhhcC-------CCcee
Confidence 35789999999999999999999999997 457777764321 1111 11111111 13567
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccC------c----chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTN------F----DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~------~----~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
++.+|+++ .+....+++ .+|+|||+|+... + .+.+...+++|+.++..+++++.+.
T Consensus 59 ~~~~Dl~d-------~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (256)
T PRK09186 59 LVELDITD-------QESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKY 131 (256)
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 78999994 433434443 3899999997432 1 1346777899998888777665432
Q ss_pred ---ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 152 ---AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 152 ---~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
.+..+||++||.+........+.|..
T Consensus 132 ~~~~~~~~iv~~sS~~~~~~~~~~~~~~~--------------------------------------------------- 160 (256)
T PRK09186 132 FKKQGGGNLVNISSIYGVVAPKFEIYEGT--------------------------------------------------- 160 (256)
T ss_pred HHhcCCceEEEEechhhhccccchhcccc---------------------------------------------------
Confidence 14568999999665432211000000
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
....+..|+.||+..|.+.+.. ..++++++++|+.+.+... ..+...... . .
T Consensus 161 -~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-------------~~~~~~~~~-~--------~ 217 (256)
T PRK09186 161 -SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-------------EAFLNAYKK-C--------C 217 (256)
T ss_pred -ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-------------HHHHHHHHh-c--------C
Confidence 0022347999999999887643 3579999999998765321 011111100 0 0
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+++++|+|++++.++.+..... . +.++.+.++
T Consensus 218 ~~~~~~~~~dva~~~~~l~~~~~~~~-~-g~~~~~~~g 253 (256)
T PRK09186 218 NGKGMLDPDDICGTLVFLLSDQSKYI-T-GQNIIVDDG 253 (256)
T ss_pred CccCCCCHHHhhhhHhheeccccccc-c-CceEEecCC
Confidence 11247899999999999886433211 1 667777665
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.3e-16 Score=148.12 Aligned_cols=220 Identities=17% Similarity=0.202 Sum_probs=141.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||||++|++++++|++.|++ |+++.|+.... .+.+. +.++.. ..++..
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~---v~~~~~~~~~~--~~~~~---------~~~~~~---------~~~~~~ 59 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGAN---VVINYASSEAG--AEALV---------AEIGAL---------GGKALA 59 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCchhH--HHHHH---------HHHHhc---------CCceEE
Confidence 35789999999999999999999999974 57777754321 11111 111110 256888
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+....++ .++|+|||+||..... +.+...+++|+.++.++++.+... .
T Consensus 60 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (248)
T PRK05557 60 VQGDVSD-------AESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ 132 (248)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999994 33333333 3689999999975321 345677899999999999888753 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+.++||++||....... .
T Consensus 133 ~~~~~v~iss~~~~~~~--------------------------------------------------------------~ 150 (248)
T PRK05557 133 RSGRIINISSVVGLMGN--------------------------------------------------------------P 150 (248)
T ss_pred CCeEEEEEcccccCcCC--------------------------------------------------------------C
Confidence 34689999985332111 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..|.+++.+ ..+++++++||+.+.++...+.. .........+. ....
T Consensus 151 ~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~---------~~~~~~~~~~~---------~~~~ 212 (248)
T PRK05557 151 GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP---------EDVKEAILAQI---------PLGR 212 (248)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC---------hHHHHHHHhcC---------CCCC
Confidence 2357999999988777654 34899999999887654432211 11111111100 1123
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+++++..++....... . +++|+++++
T Consensus 213 ~~~~~~va~~~~~l~~~~~~~~-~-g~~~~i~~~ 244 (248)
T PRK05557 213 LGQPEEIASAVAFLASDEAAYI-T-GQTLHVNGG 244 (248)
T ss_pred CcCHHHHHHHHHHHcCcccCCc-c-ccEEEecCC
Confidence 5788999999988775322222 2 789999875
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.7e-16 Score=149.52 Aligned_cols=216 Identities=17% Similarity=0.173 Sum_probs=145.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++||||+|++|+++++.|++.|+ +|+++.|+... .+.+. +. .++.+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~---~V~~~~r~~~~---~~~~~-------------~~----------~~~~~ 57 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGA---RVVAAARNAAA---LDRLA-------------GE----------TGCEP 57 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH----------hCCeE
Confidence 5789999999999999999999999986 46888886421 11111 00 13567
Q ss_pred EecCCCCCCCCCCchhhHHHhcc---CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcc---c-ce
Q 037479 90 VPGDITREDLGVKDSNLREEMWN---KLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCA---K-LI 155 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~---~-~~ 155 (492)
+.+|+++ .+....+++ .+|+|||+||..... +.+...+++|+.++.++++.+.+.. + ..
T Consensus 58 ~~~D~~~-------~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 130 (245)
T PRK07060 58 LRLDVGD-------DAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGG 130 (245)
T ss_pred EEecCCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCc
Confidence 8899984 433434443 589999999975421 3466778899999999999887531 1 25
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
+||++||...+... ....
T Consensus 131 ~iv~~sS~~~~~~~--------------------------------------------------------------~~~~ 148 (245)
T PRK07060 131 SIVNVSSQAALVGL--------------------------------------------------------------PDHL 148 (245)
T ss_pred EEEEEccHHHcCCC--------------------------------------------------------------CCCc
Confidence 89999986544321 1245
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
.|+.||+.+|.+++.+ ..+++++.+||+.+.++.... .|.+. .....+. . ......+++
T Consensus 149 ~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~~-~~~~~~~----~---------~~~~~~~~~ 212 (245)
T PRK07060 149 AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAE--AWSDP-QKSGPML----A---------AIPLGRFAE 212 (245)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhh--hccCH-HHHHHHH----h---------cCCCCCCCC
Confidence 7999999999988765 247999999999998875421 01110 0001111 0 011235789
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++|+|+++..++....... . ++++++.++
T Consensus 213 ~~d~a~~~~~l~~~~~~~~-~-G~~~~~~~g 241 (245)
T PRK07060 213 VDDVAAPILFLLSDAASMV-S-GVSLPVDGG 241 (245)
T ss_pred HHHHHHHHHHHcCcccCCc-c-CcEEeECCC
Confidence 9999999999886432222 2 788888776
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.2e-16 Score=147.11 Aligned_cols=202 Identities=18% Similarity=0.198 Sum_probs=132.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|++|||||||++|++++++|+++ + +|+++.|+... .+.+. ++ ...++++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~---~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~~~ 53 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H---TLLLGGRPAER---LDELA-------------AE---------LPGATPFP 53 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C---CEEEEeCCHHH---HHHHH-------------HH---------hccceEEe
Confidence 579999999999999999999987 5 45899886421 11111 00 13578899
Q ss_pred cCCCCCCCCCCchhhHHHhcc---CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHH----HHHHHhcccceeE
Q 037479 92 GDITREDLGVKDSNLREEMWN---KLDVVINLAATTNFD-------ERYDVALDLNTFGAKHV----LNFSKKCAKLIVL 157 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~l----l~~a~~~~~~~~~ 157 (492)
+|++ +.+....+++ ++|+|||+|+..... +.+...+++|+.+..++ ++.+++. ..++
T Consensus 54 ~D~~-------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~ 124 (227)
T PRK08219 54 VDLT-------DPEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHV 124 (227)
T ss_pred cCCC-------CHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeE
Confidence 9999 4444545555 599999999975421 34566789999995544 4444443 3689
Q ss_pred EEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchH
Q 037479 158 VHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTY 237 (492)
Q Consensus 158 V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y 237 (492)
|++||...++.. .....|
T Consensus 125 v~~ss~~~~~~~--------------------------------------------------------------~~~~~y 142 (227)
T PRK08219 125 VFINSGAGLRAN--------------------------------------------------------------PGWGSY 142 (227)
T ss_pred EEEcchHhcCcC--------------------------------------------------------------CCCchH
Confidence 999987655322 123579
Q ss_pred HHHHHHHHHHHHHh---cCC-CcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 238 VFTKVMGEMFIEHL---KEN-MSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 238 ~~sK~~aE~~v~~~---~~~-~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
+.+|...|.++... ..+ +++..++|+.+.++.... +... .+. ......+++++|
T Consensus 143 ~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~-------------~~~~--~~~-------~~~~~~~~~~~d 200 (227)
T PRK08219 143 AASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRG-------------LVAQ--EGG-------EYDPERYLRPET 200 (227)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh-------------hhhh--hcc-------ccCCCCCCCHHH
Confidence 99999988887754 234 889999988765432210 0000 000 111236799999
Q ss_pred hhhHHHHHHHhhhcCCCCCCcEEEecC
Q 037479 314 VVNAIVVAVVAHAKQPSDVNNIYQVGS 340 (492)
Q Consensus 314 va~~ii~~~~~~~~~~~~~~~iy~i~~ 340 (492)
+|++++.++..... +.+|++.-
T Consensus 201 va~~~~~~l~~~~~-----~~~~~~~~ 222 (227)
T PRK08219 201 VAKAVRFAVDAPPD-----AHITEVVV 222 (227)
T ss_pred HHHHHHHHHcCCCC-----CccceEEE
Confidence 99999999864221 56777654
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.6e-16 Score=150.29 Aligned_cols=159 Identities=19% Similarity=0.229 Sum_probs=119.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++|+||||||+||++++++|++.|+ +|+++.|+...... ..+++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~---~V~~~~r~~~~~~~-----------------------------~~~~~~~ 50 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY---RVFGTSRNPARAAP-----------------------------IPGVELL 50 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCChhhccc-----------------------------cCCCeeE
Confidence 468999999999999999999999996 46888886432110 1467889
Q ss_pred ecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hcc
Q 037479 91 PGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK----KCA 152 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~~ 152 (492)
.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+. +.
T Consensus 51 ~~D~~d-------~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~- 122 (270)
T PRK06179 51 ELDVTD-------DASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ- 122 (270)
T ss_pred EeecCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence 999994 444444443 57999999997542 14567889999999999988753 33
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+.+++|++||...+... .
T Consensus 123 ~~~~iv~isS~~~~~~~--------------------------------------------------------------~ 140 (270)
T PRK06179 123 GSGRIINISSVLGFLPA--------------------------------------------------------------P 140 (270)
T ss_pred CCceEEEECCccccCCC--------------------------------------------------------------C
Confidence 56799999996543221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCC
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKE 271 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~ 271 (492)
....|+.||+..|.+.+.. ..++++++++|+.+.++...
T Consensus 141 ~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~ 184 (270)
T PRK06179 141 YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDA 184 (270)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccc
Confidence 2357999999999887764 35899999999999887543
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.8e-16 Score=148.13 Aligned_cols=228 Identities=11% Similarity=0.066 Sum_probs=143.7
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++|+||||+|+||+++++.|++.|+ +|+++.|+.... +.+. +.++...+ ..++.++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~---~vi~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~~~ 59 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY---RVAVADINSEKA---ANVA---------QEINAEYG-------EGMAYGFG 59 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHH---------HHHHHhcC-------CceeEEEE
Confidence 67999999999999999999999986 457777764321 1111 11111110 13588999
Q ss_pred cCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cc-
Q 037479 92 GDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AK- 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~- 153 (492)
+|+++ .+....++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+.+. .+
T Consensus 60 ~D~~~-------~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 132 (259)
T PRK12384 60 ADATS-------EQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI 132 (259)
T ss_pred ccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC
Confidence 99994 33333333 368999999986532 1456778899999998888877542 13
Q ss_pred ceeEEEeeecee-ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 154 LIVLVHVSTAFV-WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 154 ~~~~V~vST~~v-~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
-.++|++||... ++. .
T Consensus 133 ~~~iv~~ss~~~~~~~---------------------------------------------------------------~ 149 (259)
T PRK12384 133 QGRIIQINSKSGKVGS---------------------------------------------------------------K 149 (259)
T ss_pred CcEEEEecCcccccCC---------------------------------------------------------------C
Confidence 348999988432 211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc--CceeeEEecCCCcc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG--KGRLTCFLGDVKGI 305 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~ 305 (492)
....|+.||+..+.+++.+ ..++++.++||+.++++.... .. ...+..... .+.......+....
T Consensus 150 ~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (259)
T PRK12384 150 HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SL------LPQYAKKLGIKPDEVEQYYIDKVPL 221 (259)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hh------hHHHHHhcCCChHHHHHHHHHhCcc
Confidence 2357999999988877654 468999999999887653211 00 011110000 00000011122334
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+++++|++++++.++....... . +.+|++.++
T Consensus 222 ~~~~~~~dv~~~~~~l~~~~~~~~-~-G~~~~v~~g 255 (259)
T PRK12384 222 KRGCDYQDVLNMLLFYASPKASYC-T-GQSINVTGG 255 (259)
T ss_pred cCCCCHHHHHHHHHHHcCcccccc-c-CceEEEcCC
Confidence 567889999999998876432211 2 789999887
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.9e-16 Score=145.01 Aligned_cols=161 Identities=19% Similarity=0.248 Sum_probs=119.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.+++|+||||||+||+++++.|++.|+ .+|+++.|+.+.... ...++.+
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~----------------------------~~~~~~~ 53 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDPESVTD----------------------------LGPRVVP 53 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecChhhhhh----------------------------cCCceEE
Confidence 4678999999999999999999999986 256888886532110 0257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc---CccEEEEcccc-cCc-------chhHHHHHHHhHHHHHHHHHHHHhc---ccce
Q 037479 90 VPGDITREDLGVKDSNLREEMWN---KLDVVINLAAT-TNF-------DERYDVALDLNTFGAKHVLNFSKKC---AKLI 155 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~-~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~ 155 (492)
+.+|+++ .+....+++ .+|+|||+||. ... .+.+...+++|+.++.++++++.+. .+..
T Consensus 54 ~~~D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 126 (238)
T PRK08264 54 LQLDVTD-------PASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGG 126 (238)
T ss_pred EEecCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 9999994 444444444 58999999997 211 2456778999999999999987642 1456
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
+||++||...+... ...+
T Consensus 127 ~~v~~sS~~~~~~~--------------------------------------------------------------~~~~ 144 (238)
T PRK08264 127 AIVNVLSVLSWVNF--------------------------------------------------------------PNLG 144 (238)
T ss_pred EEEEEcChhhccCC--------------------------------------------------------------CCch
Confidence 79999986654321 2346
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
.|+.+|+.+|.+...+ ..+++++++||+.+.++.
T Consensus 145 ~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 145 TYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 8999999999888765 248999999999886654
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.5e-16 Score=148.42 Aligned_cols=218 Identities=13% Similarity=0.075 Sum_probs=141.6
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.++||+|+||||+|+||++++++|++.|+ +|.++.|+... .+.+. ++ ...++.
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~---~v~~~~~~~~~---~~~~~-------------~~--------~~~~~~ 59 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGW---QVVLADLDRER---GSKVA-------------KA--------LGENAW 59 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCC---EEEEEcCCHHH---HHHHH-------------HH--------cCCceE
Confidence 45789999999999999999999999996 45777665321 11111 00 124678
Q ss_pred EEecCCCCCCCCCCchhhHHH----hc---cCccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhcc
Q 037479 89 LVPGDITREDLGVKDSNLREE----MW---NKLDVVINLAATTNF---------DERYDVALDLNTFGAKHVLNFSKKCA 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~----~~---~~vd~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (492)
++.+|+++ .+.... +. .++|+|||+||.... .+.+...+++|+.|+.++++++.+..
T Consensus 60 ~~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (255)
T PRK05717 60 FIAMDVAD-------EAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYL 132 (255)
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 89999995 333222 22 358999999997532 13466889999999999999996421
Q ss_pred --cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 153 --KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 153 --~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
...++|++||.......
T Consensus 133 ~~~~g~ii~~sS~~~~~~~------------------------------------------------------------- 151 (255)
T PRK05717 133 RAHNGAIVNLASTRARQSE------------------------------------------------------------- 151 (255)
T ss_pred HHcCcEEEEEcchhhcCCC-------------------------------------------------------------
Confidence 23578999886443211
Q ss_pred CCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
...+.|+.||+..|.+++.+ ..++++.+++|+.|.++..... . ...+. ....+.. ...
T Consensus 152 -~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~--~------~~~~~-~~~~~~~--------~~~ 213 (255)
T PRK05717 152 -PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR--R------AEPLS-EADHAQH--------PAG 213 (255)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc--c------chHHH-HHHhhcC--------CCC
Confidence 12357999999999888755 3469999999999988643110 0 00111 0000000 012
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+..++|++.++..++....... . +.++.+.++
T Consensus 214 ~~~~~~~va~~~~~l~~~~~~~~-~-g~~~~~~gg 246 (255)
T PRK05717 214 RVGTVEDVAAMVAWLLSRQAGFV-T-GQEFVVDGG 246 (255)
T ss_pred CCcCHHHHHHHHHHHcCchhcCc-c-CcEEEECCC
Confidence 35688999999888775332211 1 677877766
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=145.59 Aligned_cols=220 Identities=16% Similarity=0.098 Sum_probs=137.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++++||||||+||++++++|++.|+.| .+..|+... ..+.+ ...+... ..++.++.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~v---v~~~~~~~~--~~~~~---------~~~l~~~---------~~~~~~~~ 58 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAV---CLNYLRNRD--AAEAV---------VQAIRRQ---------GGEALAVA 58 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeE---EEecCCCHH--HHHHH---------HHHHHhC---------CCcEEEEE
Confidence 4689999999999999999999999643 444433211 11111 1111110 24577899
Q ss_pred cCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhccc---
Q 037479 92 GDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCAK--- 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~~--- 153 (492)
+|+++ .+..+.+++ .+|+|||+|+.... .+.+...+++|+.|+.++++.+.+...
T Consensus 59 ~Dl~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (248)
T PRK06123 59 ADVAD-------EADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRH 131 (248)
T ss_pred eccCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99994 443434433 68999999997531 134567899999999998888765311
Q ss_pred ---ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 154 ---LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 154 ---~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
-.++|++||........
T Consensus 132 ~~~~g~iv~~sS~~~~~~~~------------------------------------------------------------ 151 (248)
T PRK06123 132 GGRGGAIVNVSSMAARLGSP------------------------------------------------------------ 151 (248)
T ss_pred CCCCeEEEEECchhhcCCCC------------------------------------------------------------
Confidence 13689999864331110
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..|.+++.+ ..+++++++||+.|+++..... .....+..+. +.. + .
T Consensus 152 -~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~--------~~~~~~~~~~-~~~---p-----~ 213 (248)
T PRK06123 152 -GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG--------GEPGRVDRVK-AGI---P-----M 213 (248)
T ss_pred -CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc--------CCHHHHHHHH-hcC---C-----C
Confidence 11236999999999988755 3489999999999998854210 0111111111 111 0 0
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.-...++|++++++.++....... . +++|++.++
T Consensus 214 ~~~~~~~d~a~~~~~l~~~~~~~~-~-g~~~~~~gg 247 (248)
T PRK06123 214 GRGGTAEEVARAILWLLSDEASYT-T-GTFIDVSGG 247 (248)
T ss_pred CCCcCHHHHHHHHHHHhCccccCc-c-CCEEeecCC
Confidence 012367999999998876432212 1 788988764
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.7e-16 Score=149.39 Aligned_cols=198 Identities=15% Similarity=0.112 Sum_probs=127.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++||||||+||||++++++|++.|+ +|+++.|.... .++...++ ... ..++.+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 59 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGM---KLVLADVQQDA---LDRAVAEL---------RAQ---------GAEVLG 59 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHHHHH---------Hhc---------CCeEEE
Confidence 4679999999999999999999999996 45777775322 12211111 000 246788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (492)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++ .+.
T Consensus 60 ~~~D~~d-------~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 132 (287)
T PRK06194 60 VRTDVSD-------AAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAA 132 (287)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc
Confidence 9999994 444444443 58999999998643 1445677999999999977774 332
Q ss_pred cc-----ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 152 AK-----LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 152 ~~-----~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
.. ..++|++||...+...
T Consensus 133 ~~~~~~~~g~iv~~sS~~~~~~~--------------------------------------------------------- 155 (287)
T PRK06194 133 AEKDPAYEGHIVNTASMAGLLAP--------------------------------------------------------- 155 (287)
T ss_pred CCCCCCCCeEEEEeCChhhccCC---------------------------------------------------------
Confidence 11 1479999997655321
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHhc-------CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEe
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHLK-------ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFL 299 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~~-------~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~ 299 (492)
...+.|+.||+..|.+++.+. .++.+..+.|+.|..+... ...+....+.
T Consensus 156 -----~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~------------------~~~~~~~~~~ 212 (287)
T PRK06194 156 -----PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQ------------------SERNRPADLA 212 (287)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccc------------------ccccCchhcc
Confidence 123579999999999987651 2466667777655433221 0011122334
Q ss_pred cCCCcccceeehhhhhhHH
Q 037479 300 GDVKGIVDVIPADMVVNAI 318 (492)
Q Consensus 300 ~~~~~~~d~v~vddva~~i 318 (492)
+++....++++++|++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~ 231 (287)
T PRK06194 213 NTAPPTRSQLIAQAMSQKA 231 (287)
T ss_pred cCccccchhhHHHHHHHhh
Confidence 5556667777777766543
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-15 Score=144.74 Aligned_cols=223 Identities=17% Similarity=0.141 Sum_probs=142.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||.++++.|++.|+ +|+++.|+... .+.+.++ ++. ...++.+
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------i~~---------~~~~~~~ 65 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGA---RVVLSARKAEE---LEEAAAH---------LEA---------LGIDALW 65 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHHH---------HHh---------cCCeEEE
Confidence 4679999999999999999999999986 46888886422 1111111 111 0246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (492)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 66 ~~~Dl~d-------~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~ 138 (259)
T PRK08213 66 IAADVAD-------EADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIP 138 (259)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHh
Confidence 9999994 33332322 368999999996421 1446678899999999999987653
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
++..+||++||...+....+. +
T Consensus 139 ~~~~~~v~~sS~~~~~~~~~~-----~----------------------------------------------------- 160 (259)
T PRK08213 139 RGYGRIINVASVAGLGGNPPE-----V----------------------------------------------------- 160 (259)
T ss_pred cCCeEEEEECChhhccCCCcc-----c-----------------------------------------------------
Confidence 245689999996544321100 0
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.+|+..|.+++.+ ..++++.+++|+.+-.+..... ...+......+. ...
T Consensus 161 ~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~---------~~~~~~~~~~~~---------~~~ 222 (259)
T PRK08213 161 MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT---------LERLGEDLLAHT---------PLG 222 (259)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh---------hHHHHHHHHhcC---------CCC
Confidence 12368999999999998865 3479999999988765432111 111111111111 111
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+++++++..++........ |.++++.++
T Consensus 223 ~~~~~~~va~~~~~l~~~~~~~~~--G~~~~~~~~ 255 (259)
T PRK08213 223 RLGDDEDLKGAALLLASDASKHIT--GQILAVDGG 255 (259)
T ss_pred CCcCHHHHHHHHHHHhCccccCcc--CCEEEECCC
Confidence 234578999888777754322221 677777765
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=143.28 Aligned_cols=197 Identities=16% Similarity=0.212 Sum_probs=135.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++||||||+||++++++|++.|+ +|+++.|+... .+.+.++ +.. ...++.+
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~---~Vi~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~ 60 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGV---NVGLLARTEEN---LKAVAEE---------VEA---------YGVKVVI 60 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHH---------hCCeEEE
Confidence 4678999999999999999999999996 55888886432 1111111 110 1246888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+....+++ ++|+|||+||.... .+.+...+++|+.|+.++++.+... .
T Consensus 61 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (239)
T PRK07666 61 ATADVSD-------YEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER 133 (239)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 9999994 443334443 79999999986532 1345678999999999998887642 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+.+++|++||...+... .
T Consensus 134 ~~~~iv~~ss~~~~~~~--------------------------------------------------------------~ 151 (239)
T PRK07666 134 QSGDIINISSTAGQKGA--------------------------------------------------------------A 151 (239)
T ss_pred CCcEEEEEcchhhccCC--------------------------------------------------------------C
Confidence 45689999986543221 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..+.+++.+ ..+++++++||+.|.++...... ... +. ...
T Consensus 152 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~---------------~~~-------~~---~~~ 206 (239)
T PRK07666 152 VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG---------------LTD-------GN---PDK 206 (239)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc---------------ccc-------cC---CCC
Confidence 3457999999888877654 35899999999998876542110 000 01 124
Q ss_pred eeehhhhhhHHHHHHHh
Q 037479 308 VIPADMVVNAIVVAVVA 324 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~ 324 (492)
+++.+|+|+.++.++..
T Consensus 207 ~~~~~~~a~~~~~~l~~ 223 (239)
T PRK07666 207 VMQPEDLAEFIVAQLKL 223 (239)
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 57899999999999874
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=145.77 Aligned_cols=219 Identities=14% Similarity=0.082 Sum_probs=145.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||+.++++|++.|+ +|+++.|+. ... ...++..
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~---~v~~~~~~~-----~~~-------------------------~~~~~~~ 52 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGA---KVIGFDQAF-----LTQ-------------------------EDYPFAT 52 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecch-----hhh-------------------------cCCceEE
Confidence 6789999999999999999999999996 457777754 000 0246788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+..+.+++ ++|+|||+|+.... .+.+...+++|+.++..+++.+....
T Consensus 53 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 125 (252)
T PRK08220 53 FVLDVSD-------AAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ 125 (252)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 9999994 444444443 48999999997543 24567889999999999999875421
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 126 ~~g~iv~~ss~~~~~~~--------------------------------------------------------------~ 143 (252)
T PRK08220 126 RSGAIVTVGSNAAHVPR--------------------------------------------------------------I 143 (252)
T ss_pred CCCEEEEECCchhccCC--------------------------------------------------------------C
Confidence 33579999986433111 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCcccc-CcCchHHHHHhccCceeeEEecCCCccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAE-GIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
....|+.||+..|.+++.+ ..++++++++|+.|.++....+..... ............. ......
T Consensus 144 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 214 (252)
T PRK08220 144 GMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFK---------LGIPLG 214 (252)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHh---------hcCCCc
Confidence 3467999999999988765 258999999999998875422100000 0000000000110 111223
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|++++.++....... . +++..+.++
T Consensus 215 ~~~~~~dva~~~~~l~~~~~~~~-~-g~~i~~~gg 247 (252)
T PRK08220 215 KIARPQEIANAVLFLASDLASHI-T-LQDIVVDGG 247 (252)
T ss_pred ccCCHHHHHHHHHHHhcchhcCc-c-CcEEEECCC
Confidence 67899999999999886432221 1 666666665
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-15 Score=142.97 Aligned_cols=220 Identities=18% Similarity=0.181 Sum_probs=145.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+... .+.+.+ .++. ...++.+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~---~v~~~~r~~~~---~~~~~~---------~~~~---------~~~~~~~ 60 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA---TVAFNDGLAAE---ARELAA---------ALEA---------AGGRAHA 60 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHH---------HHHh---------cCCcEEE
Confidence 5689999999999999999999999996 45777765322 111111 1111 0246889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+..
T Consensus 61 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (250)
T PRK12939 61 IAADLAD-------PASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS 133 (250)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999994 44333333 468999999997532 13566778999999999999876531
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||....... .
T Consensus 134 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 151 (250)
T PRK12939 134 GRGRIVNLASDTALWGA--------------------------------------------------------------P 151 (250)
T ss_pred CCeEEEEECchhhccCC--------------------------------------------------------------C
Confidence 23489999985443211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..|.+++.+ ..++++.+++|+.|..+....... ......+.. ......
T Consensus 152 ~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~---------~~~~~~ 214 (250)
T PRK12939 152 KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--------DERHAYYLK---------GRALER 214 (250)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--------hHHHHHHHh---------cCCCCC
Confidence 2347999999999988754 357999999999887654322110 011111111 112235
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+|++++.++....... . ++++++.++
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~~-~-G~~i~~~gg 246 (250)
T PRK12939 215 LQVPDDVAGAVLFLLSDAARFV-T-GQLLPVNGG 246 (250)
T ss_pred CCCHHHHHHHHHHHhCccccCc-c-CcEEEECCC
Confidence 7889999999999886432211 2 788888876
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.5e-15 Score=144.51 Aligned_cols=202 Identities=18% Similarity=0.263 Sum_probs=135.7
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++||||||+|+||++++++|++.|+ +|.++.|+... .+.+. +.+... ..++.++.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~---~Vi~~~r~~~~---~~~~~---------~~l~~~---------~~~~~~~~ 56 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA---QLVLAARNETR---LASLA---------QELADH---------GGEALVVP 56 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCcEEEEE
Confidence 46899999999999999999999986 45888886422 11111 111111 24678899
Q ss_pred cCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCcc--------hhHHHHHHHhHHHHHHHHHHHHhc--ccc
Q 037479 92 GDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNFD--------ERYDVALDLNTFGAKHVLNFSKKC--AKL 154 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~~--------~~~~~~~~~Nv~gt~~ll~~a~~~--~~~ 154 (492)
+|+++ .+..+.+++ ++|+|||+||..... +.+...+++|+.|+.++++.+... .+.
T Consensus 57 ~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 129 (263)
T PRK06181 57 TDVSD-------AEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR 129 (263)
T ss_pred ccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 99994 443334333 689999999975421 225667999999999999988542 134
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||...+... ...
T Consensus 130 ~~iv~~sS~~~~~~~--------------------------------------------------------------~~~ 147 (263)
T PRK06181 130 GQIVVVSSLAGLTGV--------------------------------------------------------------PTR 147 (263)
T ss_pred CEEEEEecccccCCC--------------------------------------------------------------CCc
Confidence 689999986554321 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..|.+.+.+ ..++++++++|+.|..+....... . .|.. ....+....+++
T Consensus 148 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~---~------------~~~~--~~~~~~~~~~~~ 210 (263)
T PRK06181 148 SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALD---G------------DGKP--LGKSPMQESKIM 210 (263)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcc---c------------cccc--cccccccccCCC
Confidence 67999999999888654 358999999999887654321100 0 0110 001111223789
Q ss_pred ehhhhhhHHHHHHH
Q 037479 310 PADMVVNAIVVAVV 323 (492)
Q Consensus 310 ~vddva~~ii~~~~ 323 (492)
+++|+|++++.++.
T Consensus 211 ~~~dva~~i~~~~~ 224 (263)
T PRK06181 211 SAEECAEAILPAIA 224 (263)
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999999886
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.1e-15 Score=144.42 Aligned_cols=222 Identities=14% Similarity=0.158 Sum_probs=147.4
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++|+||||||+|+||.+++++|++.|. +|+++.|+... ..+.+.+. +.. ...++.
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~---~V~l~~r~~~~--~~~~~~~~---------~~~---------~~~~~~ 99 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA---DIAIVYLDEHE--DANETKQR---------VEK---------EGVKCL 99 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcch--HHHHHHHH---------HHh---------cCCeEE
Confidence 45689999999999999999999999996 45777775432 11111111 100 024678
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc-c
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC-A 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 152 (492)
++.+|+++ .+..+.++ .++|+|||+|+.... .+.+...+++|+.|+.++++++... .
T Consensus 100 ~~~~Dl~~-------~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 172 (290)
T PRK06701 100 LIPGDVSD-------EAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK 172 (290)
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 89999994 33333333 368999999996422 1345778999999999999998763 2
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
...++|++||..++....
T Consensus 173 ~~g~iV~isS~~~~~~~~-------------------------------------------------------------- 190 (290)
T PRK06701 173 QGSAIINTGSITGYEGNE-------------------------------------------------------------- 190 (290)
T ss_pred hCCeEEEEecccccCCCC--------------------------------------------------------------
Confidence 235899999976553321
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+++.+ ..+++++.++|+.|..+..... . ....+..+. .......
T Consensus 191 ~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~-------~-~~~~~~~~~---------~~~~~~~ 253 (290)
T PRK06701 191 TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD-------F-DEEKVSQFG---------SNTPMQR 253 (290)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc-------c-CHHHHHHHH---------hcCCcCC
Confidence 1246999999999888766 2489999999999887643210 0 011111111 1112335
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++........ +.++++.++
T Consensus 254 ~~~~~dva~~~~~ll~~~~~~~~--G~~i~idgg 285 (290)
T PRK06701 254 PGQPEELAPAYVFLASPDSSYIT--GQMLHVNGG 285 (290)
T ss_pred CcCHHHHHHHHHHHcCcccCCcc--CcEEEeCCC
Confidence 78899999999998874322221 778888776
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=148.07 Aligned_cols=227 Identities=16% Similarity=0.150 Sum_probs=142.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|.... .+.+. ++.+ ...++.+
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~---~v~~~~~~~~~---~~~~~-------------~~~~------~~~~~~~ 70 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGA---KVCIVDLQDDL---GQNVC-------------DSLG------GEPNVCF 70 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHH-------------HHhc------CCCceEE
Confidence 5789999999999999999999999996 45777775321 11111 1100 0146889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF---------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+..
T Consensus 71 ~~~Dl~d-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 143 (280)
T PLN02253 71 FHCDVTV-------EDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMI 143 (280)
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 9999994 444444443 69999999997531 14567889999999999998776421
Q ss_pred --cceeEEEeeecee-ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 153 --KLIVLVHVSTAFV-WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 153 --~~~~~V~vST~~v-~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
+-.++|++||... ++.
T Consensus 144 ~~~~g~ii~isS~~~~~~~------------------------------------------------------------- 162 (280)
T PLN02253 144 PLKKGSIVSLCSVASAIGG------------------------------------------------------------- 162 (280)
T ss_pred hcCCceEEEecChhhcccC-------------------------------------------------------------
Confidence 2246888877433 211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCC-CCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEP-FPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p-~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
..+..|+.||+..|.+.+.+ ..++++.+++|+.|.++.... .+. . ......+..... .......
T Consensus 163 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~-~~~~~~~~~~~~----~~~~~~~ 232 (280)
T PLN02253 163 --LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPE---D-ERTEDALAGFRA----FAGKNAN 232 (280)
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccccc---c-cchhhhhhhhHH----HhhcCCC
Confidence 12357999999999998765 348999999999997764311 110 0 000011100000 0000000
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+.++|+|++++.++....... . +..+++.++
T Consensus 233 l~~~~~~~~dva~~~~~l~s~~~~~i-~-G~~i~vdgG 268 (280)
T PLN02253 233 LKGVELTVDDVANAVLFLASDEARYI-S-GLNLMIDGG 268 (280)
T ss_pred CcCCCCCHHHHHHHHHhhcCcccccc-c-CcEEEECCc
Confidence 01124679999999998876422211 1 678888776
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=145.52 Aligned_cols=217 Identities=16% Similarity=0.141 Sum_probs=143.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++||||||+|+||.++++.|++.|. +|+++.|+.... +... ++ ...++..
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~---~Vi~~~r~~~~~---~~~~-~~--------------------~~~~~~~ 65 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGA---RVALLDRSEDVA---EVAA-QL--------------------LGGNAKG 65 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHH-Hh--------------------hCCceEE
Confidence 4689999999999999999999999996 568888864311 1100 00 0145678
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+..+.++ .++|+|||+||.... .+.+...+++|+.|+.++++.+... .
T Consensus 66 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (255)
T PRK06841 66 LVCDVSD-------SQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA 138 (255)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Confidence 9999994 33333333 368999999997542 1345678999999999999988653 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||....... .
T Consensus 139 ~~~~iv~~sS~~~~~~~--------------------------------------------------------------~ 156 (255)
T PRK06841 139 GGGKIVNLASQAGVVAL--------------------------------------------------------------E 156 (255)
T ss_pred CCceEEEEcchhhccCC--------------------------------------------------------------C
Confidence 35689999986432111 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..++.+..++|+.|..+.... .|. . ........+ .....
T Consensus 157 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~--~~~----~--~~~~~~~~~---------~~~~~ 219 (255)
T PRK06841 157 RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK--AWA----G--EKGERAKKL---------IPAGR 219 (255)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc--ccc----h--hHHHHHHhc---------CCCCC
Confidence 2347999999988877654 358999999999887764321 110 0 001111111 11225
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+.+++|+|++++.++........ |.++++.++
T Consensus 220 ~~~~~~va~~~~~l~~~~~~~~~--G~~i~~dgg 251 (255)
T PRK06841 220 FAYPEEIAAAALFLASDAAAMIT--GENLVIDGG 251 (255)
T ss_pred CcCHHHHHHHHHHHcCccccCcc--CCEEEECCC
Confidence 78899999999998864332221 778888776
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.8e-15 Score=141.94 Aligned_cols=219 Identities=11% Similarity=0.104 Sum_probs=143.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+... ...+.+. + ...++..
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~vi~~~r~~~~-~~~~~~~-------------~---------~~~~~~~ 56 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGA---DIVGAGRSEPS-ETQQQVE-------------A---------LGRRFLS 56 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCchHH-HHHHHHH-------------h---------cCCceEE
Confidence 5789999999999999999999999996 45777775321 1111111 0 1246889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+....++ .++|+|||+||.... .+.++..+++|+.++.++++.+... .
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 129 (248)
T TIGR01832 57 LTADLSD-------IEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQ 129 (248)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 9999995 33332222 469999999997532 1356778999999999999987542 1
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ ..++|++||...+...
T Consensus 130 ~~~g~iv~~sS~~~~~~~-------------------------------------------------------------- 147 (248)
T TIGR01832 130 GRGGKIINIASMLSFQGG-------------------------------------------------------------- 147 (248)
T ss_pred CCCeEEEEEecHHhccCC--------------------------------------------------------------
Confidence 2 3589999997655322
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+++.+ ..++++++++|+.|..+...... ........+. . ..+ ..
T Consensus 148 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-------~~~~~~~~~~-~---~~~-----~~ 211 (248)
T TIGR01832 148 IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALR-------ADEDRNAAIL-E---RIP-----AG 211 (248)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccc-------cChHHHHHHH-h---cCC-----CC
Confidence 12347999999999888765 34899999999998776432111 0000000000 0 111 13
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++..+|+|++++.++....... . +.++.+.++
T Consensus 212 ~~~~~~dva~~~~~l~s~~~~~~-~-G~~i~~dgg 244 (248)
T TIGR01832 212 RWGTPDDIGGPAVFLASSASDYV-N-GYTLAVDGG 244 (248)
T ss_pred CCcCHHHHHHHHHHHcCccccCc-C-CcEEEeCCC
Confidence 57889999999998886432221 1 556665544
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.6e-15 Score=143.18 Aligned_cols=223 Identities=17% Similarity=0.173 Sum_probs=142.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+.... ...++.+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~r~~~~~------------------------------~~~~~~~ 53 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGA---RVVTTARSRPDD------------------------------LPEGVEF 53 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCC---EEEEEeCChhhh------------------------------cCCceeE
Confidence 6789999999999999999999999996 568888864321 0245788
Q ss_pred EecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccC---------cchhHHHHHHHhHHHHHHHHHHHHhc--
Q 037479 90 VPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTN---------FDERYDVALDLNTFGAKHVLNFSKKC-- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (492)
+.+|+++ .+..+.+ ..++|+|||+||... ..+.++..+++|+.|+.++++.+...
T Consensus 54 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (260)
T PRK06523 54 VAADLTT-------AEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMI 126 (260)
T ss_pred EecCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 9999994 3333222 246899999999532 12456788999999998887765431
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..++|++||....... +
T Consensus 127 ~~~~g~ii~isS~~~~~~~---------~--------------------------------------------------- 146 (260)
T PRK06523 127 ARGSGVIIHVTSIQRRLPL---------P--------------------------------------------------- 146 (260)
T ss_pred hcCCcEEEEEecccccCCC---------C---------------------------------------------------
Confidence 134579999986443211 0
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-CccccCcC-chHHHHHhccCceeeEEecCCC
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-PGWAEGIR-TIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~gw~~~~~-~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..|.+.+.+ ..++++.+++|+.|.++..... +.+..... ........+... ....+
T Consensus 147 -~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p---- 220 (260)
T PRK06523 147 -ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDS-LGGIP---- 220 (260)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHH-hccCc----
Confidence 13467999999999887765 3589999999999987653210 00000000 000000000000 00001
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+...+|+++++..++....... . ++++.+.++
T Consensus 221 -~~~~~~~~~va~~~~~l~s~~~~~~-~-G~~~~vdgg 255 (260)
T PRK06523 221 -LGRPAEPEEVAELIAFLASDRAASI-T-GTEYVIDGG 255 (260)
T ss_pred -cCCCCCHHHHHHHHHHHhCcccccc-c-CceEEecCC
Confidence 1124567999999988886432222 1 778888877
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-15 Score=165.70 Aligned_cols=231 Identities=19% Similarity=0.200 Sum_probs=149.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.|++||||||+|+||+.+++.|++.|. +|+++.|+.... +.+. .+.+ . ..++..
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga---~Vvl~~r~~~~~---~~~~-------------~~l~----~--~~~v~~ 474 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGA---CVVLADLDEEAA---EAAA-------------AELG----G--PDRALG 474 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcC---EEEEEeCCHHHH---HHHH-------------HHHh----c--cCcEEE
Confidence 4689999999999999999999999986 568888864321 1111 0000 0 036888
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+....++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+..
T Consensus 475 v~~Dvtd-------~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~ 547 (681)
T PRK08324 475 VACDVTD-------EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ 547 (681)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999994 44333333 368999999996532 24567889999999999988775421
Q ss_pred cc-eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 KL-IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~~-~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+. .+||++||.......
T Consensus 548 ~~~g~iV~vsS~~~~~~~-------------------------------------------------------------- 565 (681)
T PRK08324 548 GLGGSIVFIASKNAVNPG-------------------------------------------------------------- 565 (681)
T ss_pred CCCcEEEEECCccccCCC--------------------------------------------------------------
Confidence 22 589999986443211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCcee-cCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIIT-GTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~-g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..|.+++.+ ..++++.+++|+.|+ ++... .+.|.... ....+...........++...
T Consensus 566 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~-~~~~~~~~----~~~~g~~~~~~~~~~~~~~~l 640 (681)
T PRK08324 566 PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIW-TGEWIEAR----AAAYGLSEEELEEFYRARNLL 640 (681)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccc-cchhhhhh----hhhccCChHHHHHHHHhcCCc
Confidence 12457999999999998865 347999999999998 44321 01121100 000000000000012334445
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++++++|+|++++.++....... . +.++++.++
T Consensus 641 ~~~v~~~DvA~a~~~l~s~~~~~~-t-G~~i~vdgG 674 (681)
T PRK08324 641 KREVTPEDVAEAVVFLASGLLSKT-T-GAIITVDGG 674 (681)
T ss_pred CCccCHHHHHHHHHHHhCccccCC-c-CCEEEECCC
Confidence 678999999999998874222222 1 789999988
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.1e-15 Score=141.46 Aligned_cols=220 Identities=18% Similarity=0.211 Sum_probs=143.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||+.+++.|++.|+ +|+++.|+.+ .+.+.+.+ .+ ...++.+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~~~~~----~~~~~~~~----------~~--------~~~~~~~ 67 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGA---DIIITTHGTN----WDETRRLI----------EK--------EGRKVTF 67 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCcH----HHHHHHHH----------Hh--------cCCceEE
Confidence 4689999999999999999999999996 4577777621 12222111 00 1246889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.++..+++.+... .
T Consensus 68 ~~~D~~~-------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 140 (258)
T PRK06935 68 VQVDLTK-------PESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ 140 (258)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc
Confidence 9999994 443434443 68999999997532 2356788999999988888776542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 141 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 158 (258)
T PRK06935 141 GSGKIINIASMLSFQGG--------------------------------------------------------------K 158 (258)
T ss_pred CCeEEEEECCHHhccCC--------------------------------------------------------------C
Confidence 34689999996544221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..|.+++.+ ..++++++++|+.|..+...+.+. . . ........ ..+ ...
T Consensus 159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~---~-~---~~~~~~~~----~~~-----~~~ 222 (258)
T PRK06935 159 FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA---D-K---NRNDEILK----RIP-----AGR 222 (258)
T ss_pred CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc---C-h---HHHHHHHh----cCC-----CCC
Confidence 2357999999999988765 358999999999987765432211 0 0 00001000 011 123
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+++.+..++....... . +.++.+.++
T Consensus 223 ~~~~~dva~~~~~l~s~~~~~~-~-G~~i~~dgg 254 (258)
T PRK06935 223 WGEPDDLMGAAVFLASRASDYV-N-GHILAVDGG 254 (258)
T ss_pred CCCHHHHHHHHHHHcChhhcCC-C-CCEEEECCC
Confidence 5667899999988776432221 1 677777765
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.6e-15 Score=140.33 Aligned_cols=208 Identities=16% Similarity=0.136 Sum_probs=138.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.+++|+||||||++|++++.+|++.|+ +|+++.|+... .+++.+++ .. ..++..
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~---~V~~~~r~~~~---~~~~~~~l---------~~----------~~~~~~ 58 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGY---KVAITARDQKE---LEEAAAEL---------NN----------KGNVLG 58 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEeeCCHHH---HHHHHHHH---------hc----------cCcEEE
Confidence 3578999999999999999999999886 46888886421 11221111 00 145788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (492)
+.+|+++ .+.+..++ ..+|+|||+|+.... .+.+...+++|+.|+.++++.+.+. .+
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (237)
T PRK07326 59 LAADVRD-------EADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG 131 (237)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC
Confidence 9999994 43333333 378999999987542 1345678999999999998887643 13
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||....... ..
T Consensus 132 ~~~iv~~ss~~~~~~~--------------------------------------------------------------~~ 149 (237)
T PRK07326 132 GGYIINISSLAGTNFF--------------------------------------------------------------AG 149 (237)
T ss_pred CeEEEEECChhhccCC--------------------------------------------------------------CC
Confidence 4679999986433211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.+|+..+.+.+.. ..+++++++||+.+.++.....+. . .....
T Consensus 150 ~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-------------------------~--~~~~~ 202 (237)
T PRK07326 150 GAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS-------------------------E--KDAWK 202 (237)
T ss_pred CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc-------------------------h--hhhcc
Confidence 356999999888777654 358999999999886643311100 0 00013
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..+|+++.++.++..+.... .....+.++
T Consensus 203 ~~~~d~a~~~~~~l~~~~~~~---~~~~~~~~~ 232 (237)
T PRK07326 203 IQPEDIAQLVLDLLKMPPRTL---PSKIEVRPS 232 (237)
T ss_pred CCHHHHHHHHHHHHhCCcccc---ccceEEecC
Confidence 678999999999987543322 445555544
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.2e-15 Score=140.95 Aligned_cols=220 Identities=10% Similarity=0.099 Sum_probs=140.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+|++|||||+|+||++++++|++.|. +|+++.|.... ..+.+.+ .++.. ..++.++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~---~v~~~~~~~~~--~~~~~~~---------~~~~~---------~~~~~~~ 64 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF---DVAVHYNRSRD--EAEALAA---------EIRAL---------GRRAVAL 64 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHH---------HHHhc---------CCeEEEE
Confidence 478999999999999999999999986 44666664321 1111111 11110 2468889
Q ss_pred ecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---c
Q 037479 91 PGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---K 153 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~ 153 (492)
.+|+++ .+....++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.... .
T Consensus 65 ~~Dl~d-------~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (258)
T PRK09134 65 QADLAD-------EAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA 137 (258)
T ss_pred EcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 999994 33333333 358999999986432 14567889999999999999877632 1
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||...+... ..
T Consensus 138 ~~~iv~~~s~~~~~~~--------------------------------------------------------------p~ 155 (258)
T PRK09134 138 RGLVVNMIDQRVWNLN--------------------------------------------------------------PD 155 (258)
T ss_pred CceEEEECchhhcCCC--------------------------------------------------------------CC
Confidence 2467777764322110 11
Q ss_pred CchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 234 PNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
...|+.||+..|.+.+.+ ..++.++.++|+.+....... ...+ .....+. + .....
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~----------~~~~-~~~~~~~----~-----~~~~~ 215 (258)
T PRK09134 156 FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS----------PEDF-ARQHAAT----P-----LGRGS 215 (258)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC----------hHHH-HHHHhcC----C-----CCCCc
Confidence 247999999999888765 235999999999876543210 0111 1111110 0 11246
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccH
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIY 348 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~ 348 (492)
.++|+|++++.++.. .... ++.|++.++ ..++|
T Consensus 216 ~~~d~a~~~~~~~~~-~~~~---g~~~~i~gg--~~~~~ 248 (258)
T PRK09134 216 TPEEIAAAVRYLLDA-PSVT---GQMIAVDGG--QHLAW 248 (258)
T ss_pred CHHHHHHHHHHHhcC-CCcC---CCEEEECCC--eeccc
Confidence 799999999999873 2222 788998887 34444
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.2e-15 Score=141.62 Aligned_cols=221 Identities=15% Similarity=0.137 Sum_probs=138.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||+|+||++++++|++.|+ +|+++.|+... .+.+. ++ ...++.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~v~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 56 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGA---RVAITGRDPAS---LEAAR-------------AE--------LGESALV 56 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCHHH---HHHHH-------------HH--------hCCceEE
Confidence 4679999999999999999999999996 45777775321 11111 11 1246778
Q ss_pred EecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc-ccc
Q 037479 90 VPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKC-AKL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~~ 154 (492)
+.+|++++ +....+ ..++|+|||+||..... +.+...+++|+.|+.++++++... ...
T Consensus 57 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (249)
T PRK06500 57 IRADAGDV-------AAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP 129 (249)
T ss_pred EEecCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 89999853 222222 24689999999975421 456778999999999999999752 122
Q ss_pred eeEEEeeec-eeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 155 IVLVHVSTA-FVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 155 ~~~V~vST~-~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
.++|++||. ..++. ..
T Consensus 130 ~~~i~~~S~~~~~~~---------------------------------------------------------------~~ 146 (249)
T PRK06500 130 ASIVLNGSINAHIGM---------------------------------------------------------------PN 146 (249)
T ss_pred CEEEEEechHhccCC---------------------------------------------------------------CC
Confidence 467776663 22221 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
.+.|+.+|+..|.+++.+ ..+++++++||+.+.++...... ... .....+...+..+. + ..-+
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~--~~~-~~~~~~~~~~~~~~----~-----~~~~ 214 (249)
T PRK06500 147 SSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLG--LPE-ATLDAVAAQIQALV----P-----LGRF 214 (249)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhc--cCc-cchHHHHHHHHhcC----C-----CCCC
Confidence 468999999999998654 34899999999999886432100 000 00111111111111 0 0123
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++|+|+++..++....... . +....+.++
T Consensus 215 ~~~~~va~~~~~l~~~~~~~~-~-g~~i~~~gg 245 (249)
T PRK06500 215 GTPEEIAKAVLYLASDESAFI-V-GSEIIVDGG 245 (249)
T ss_pred cCHHHHHHHHHHHcCccccCc-c-CCeEEECCC
Confidence 578999999998876322111 1 455555544
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.4e-15 Score=141.81 Aligned_cols=217 Identities=13% Similarity=0.170 Sum_probs=142.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|+ +|+++.|+... ..++..
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~---~Vi~~~r~~~~--------------------------------~~~~~~ 48 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGS---NVINFDIKEPS--------------------------------YNDVDY 48 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCccc--------------------------------cCceEE
Confidence 4689999999999999999999999996 55788886432 135788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.+. .
T Consensus 49 ~~~D~~~~-------~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 121 (258)
T PRK06398 49 FKVDVSNK-------EQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ 121 (258)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999953 3333333 368999999997432 2456788999999999998887542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 122 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 139 (258)
T PRK06398 122 DKGVIINIASVQSFAVT--------------------------------------------------------------R 139 (258)
T ss_pred CCeEEEEeCcchhccCC--------------------------------------------------------------C
Confidence 34689999996544221 2
Q ss_pred CCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCc--CchHHHHHhccCceeeEEecCCCccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGI--RTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
....|+.||+..|.+.+.+ .+++.+..++|+.|-.+.......+..+. ......+..+. ......
T Consensus 140 ~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 210 (258)
T PRK06398 140 NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWG---------EMHPMK 210 (258)
T ss_pred CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhh---------hcCCcC
Confidence 3468999999999988765 34599999999988665432111110000 00000010100 001112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+...+|+|++++.++....... . +.++.+.++
T Consensus 211 ~~~~p~eva~~~~~l~s~~~~~~-~-G~~i~~dgg 243 (258)
T PRK06398 211 RVGKPEEVAYVVAFLASDLASFI-T-GECVTVDGG 243 (258)
T ss_pred CCcCHHHHHHHHHHHcCcccCCC-C-CcEEEECCc
Confidence 35678999999988876332221 1 677777766
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.6e-15 Score=142.17 Aligned_cols=161 Identities=19% Similarity=0.220 Sum_probs=113.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+||||||++|++++++|++.|+ +|+++.|++.. .+.+. .+ ...++.++.+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~~~~ 53 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH---KVIATGRRQER---LQELK-------------DE--------LGDNLYIAQL 53 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------HH--------hccceEEEEe
Confidence 5899999999999999999999996 45888886432 11111 10 1246888999
Q ss_pred CCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC--------cchhHHHHHHHhHHHHHHHHHHHHhc---ccc
Q 037479 93 DITREDLGVKDSNLREEMW-------NKLDVVINLAATTN--------FDERYDVALDLNTFGAKHVLNFSKKC---AKL 154 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~ 154 (492)
|+++ .+..+.++ .++|+|||+||... ..+.++..+++|+.|+..+++.+... .+.
T Consensus 54 Dl~~-------~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 126 (248)
T PRK10538 54 DVRN-------RAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH 126 (248)
T ss_pred cCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 9995 33333333 37999999998632 12456778999999977766665421 145
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||...... + ...
T Consensus 127 ~~iv~isS~~~~~~---------~-----------------------------------------------------~~~ 144 (248)
T PRK10538 127 GHIINIGSTAGSWP---------Y-----------------------------------------------------AGG 144 (248)
T ss_pred cEEEEECCcccCCC---------C-----------------------------------------------------CCC
Confidence 78999999643211 0 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
+.|+.||+..|.+.+.. ..++.+.+++|+.|.++.
T Consensus 145 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 145 NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence 58999999999988755 357999999999998654
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.7e-15 Score=140.13 Aligned_cols=219 Identities=16% Similarity=0.188 Sum_probs=139.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.+|+++||||+|+||+++++.|++.|++ |+++.|+... ..+.+. ..++.+
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~---v~~~~~~~~~--~~~~l~------------------------~~~~~~ 55 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAK---VAVLYNSAEN--EAKELR------------------------EKGVFT 55 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCcHH--HHHHHH------------------------hCCCeE
Confidence 56899999999999999999999999974 4665554321 111111 124678
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (492)
+.+|+++ ++..+.++ .++|+|||+||.... .+.++..+++|+.|+..+.+.+ ++.
T Consensus 56 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 128 (255)
T PRK06463 56 IKCDVGN-------RDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS 128 (255)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence 9999994 43333433 368999999987432 2346778999999976665543 322
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||...++...
T Consensus 129 -~~g~iv~isS~~~~~~~~------------------------------------------------------------- 146 (255)
T PRK06463 129 -KNGAIVNIASNAGIGTAA------------------------------------------------------------- 146 (255)
T ss_pred -CCcEEEEEcCHHhCCCCC-------------------------------------------------------------
Confidence 346899999976543210
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+++.. ..++++.+++|+.|-.+....... . .........+.. .....
T Consensus 147 ~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~---~-~~~~~~~~~~~~---------~~~~~ 213 (255)
T PRK06463 147 EGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKS---Q-EEAEKLRELFRN---------KTVLK 213 (255)
T ss_pred CCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccC---c-cchHHHHHHHHh---------CCCcC
Confidence 12356999999999888765 348999999999886543211000 0 000011000000 11122
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+...++++++++.++....... . +.++.+.++
T Consensus 214 ~~~~~~~va~~~~~l~s~~~~~~-~-G~~~~~dgg 246 (255)
T PRK06463 214 TTGKPEDIANIVLFLASDDARYI-T-GQVIVADGG 246 (255)
T ss_pred CCcCHHHHHHHHHHHcChhhcCC-C-CCEEEECCC
Confidence 35678999999998876433221 1 778888776
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.2e-15 Score=141.39 Aligned_cols=221 Identities=13% Similarity=0.099 Sum_probs=143.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++||||+|+||.++++.|++.|+ +|+++.|+... .+.+.++ ++. ...++.+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~---~Vi~~~r~~~~---~~~~~~~---------l~~---------~~~~~~~ 63 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGA---DVLIAARTESQ---LDEVAEQ---------IRA---------AGRRAHV 63 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHh---------cCCcEEE
Confidence 5789999999999999999999999986 55888886422 1111111 111 0246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (492)
+.+|+++ ++....++ .++|+|||+|+.... .+.+...+++|+.|+.++++++...
T Consensus 64 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (263)
T PRK07814 64 VAADLAH-------PEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH 136 (263)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh
Confidence 9999994 44443333 368999999986432 1456788999999999999998642
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||.......
T Consensus 137 ~~~g~iv~~sS~~~~~~~-------------------------------------------------------------- 154 (263)
T PRK07814 137 SGGGSVINISSTMGRLAG-------------------------------------------------------------- 154 (263)
T ss_pred cCCeEEEEEccccccCCC--------------------------------------------------------------
Confidence 234689999985322110
Q ss_pred CCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
...+.|+.||+..|.+++.+ ..+++++.++|+.|..+..... .....+. ....+.. ....
T Consensus 155 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~-------~~~~~~~-~~~~~~~--------~~~~ 218 (263)
T PRK07814 155 RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVV-------AANDELR-APMEKAT--------PLRR 218 (263)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhc-------cCCHHHH-HHHHhcC--------CCCC
Confidence 23467999999999988765 3468999999988765432110 0001111 1111110 1123
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++........ +..+.+.++
T Consensus 219 ~~~~~~va~~~~~l~~~~~~~~~--g~~~~~~~~ 250 (263)
T PRK07814 219 LGDPEDIAAAAVYLASPAGSYLT--GKTLEVDGG 250 (263)
T ss_pred CcCHHHHHHHHHHHcCccccCcC--CCEEEECCC
Confidence 46789999999998864322221 667777654
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.65 E-value=3e-15 Score=142.20 Aligned_cols=216 Identities=15% Similarity=0.172 Sum_probs=135.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++||||||+||+++++.|++.|+ .|.+..|+... .+.+. .+ ...++.+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~---~v~~~~~~~~~---~~~~~-------------~~--------~~~~~~~ 56 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGA---IVGLHGTRVEK---LEALA-------------AE--------LGERVKI 56 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH-------------HH--------hCCceEE
Confidence 3679999999999999999999999986 44555554211 11111 01 1246788
Q ss_pred EecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+..+.+ +.++|+|||+|+.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (245)
T PRK12936 57 FPANLSD-------RDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR 129 (245)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 9999994 4433333 2468999999997532 2456788999999999998876532 2
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||....... .
T Consensus 130 ~~~~iv~~sS~~~~~~~--------------------------------------------------------------~ 147 (245)
T PRK12936 130 RYGRIINITSVVGVTGN--------------------------------------------------------------P 147 (245)
T ss_pred CCCEEEEECCHHhCcCC--------------------------------------------------------------C
Confidence 45689999985433211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..+.+++.. ..++++++++|+.+..+....... .......+. .....
T Consensus 148 ~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~----------~~~~~~~~~--------~~~~~ 209 (245)
T PRK12936 148 GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLND----------KQKEAIMGA--------IPMKR 209 (245)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccCh----------HHHHHHhcC--------CCCCC
Confidence 1246888888666655433 357999999999876543211110 000000000 01123
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+++++..++...... -. ++++++.++
T Consensus 210 ~~~~~~ia~~~~~l~~~~~~~-~~-G~~~~~~~g 241 (245)
T PRK12936 210 MGTGAEVASAVAYLASSEAAY-VT-GQTIHVNGG 241 (245)
T ss_pred CcCHHHHHHHHHHHcCccccC-cC-CCEEEECCC
Confidence 456899999998776532221 12 788998876
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8e-15 Score=139.33 Aligned_cols=220 Identities=15% Similarity=0.131 Sum_probs=140.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++|+||||+|+||+++++.|++.|++ ++++.|+... ..+.+.+ .+.. ...++.++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~---v~~~~~~~~~--~~~~~~~---------~~~~---------~~~~~~~~ 60 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFA---VAVNYAGSAA--AADELVA---------EIEA---------AGGRAIAV 60 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEecCCCHH--HHHHHHH---------HHHh---------cCCeEEEE
Confidence 5799999999999999999999999974 4555554321 1111110 1111 12568899
Q ss_pred ecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-cce
Q 037479 91 PGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-KLI 155 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~ 155 (492)
.+|+++ .+..+++++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+.. .-.
T Consensus 61 ~~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 133 (245)
T PRK12937 61 QADVAD-------AAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGG 133 (245)
T ss_pred ECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCc
Confidence 999994 333434433 68999999997532 23467789999999999998886531 224
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
++|++||....... ...+
T Consensus 134 ~iv~~ss~~~~~~~--------------------------------------------------------------~~~~ 151 (245)
T PRK12937 134 RIINLSTSVIALPL--------------------------------------------------------------PGYG 151 (245)
T ss_pred EEEEEeeccccCCC--------------------------------------------------------------CCCc
Confidence 89999985433211 2346
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
.|+.+|+..|.+++.. ..++++++++|+.+-.+.... ......+..+.... ...-+.+
T Consensus 152 ~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~--------~~~~~~~~~~~~~~---------~~~~~~~ 214 (245)
T PRK12937 152 PYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFN--------GKSAEQIDQLAGLA---------PLERLGT 214 (245)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcc--------cCCHHHHHHHHhcC---------CCCCCCC
Confidence 7999999999988765 347999999998876553100 00011111111100 1112457
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++|++++++.++....... . +.++++.++
T Consensus 215 ~~d~a~~~~~l~~~~~~~~-~-g~~~~~~~g 243 (245)
T PRK12937 215 PEEIAAAVAFLAGPDGAWV-N-GQVLRVNGG 243 (245)
T ss_pred HHHHHHHHHHHcCccccCc-c-ccEEEeCCC
Confidence 7999999888875322222 1 678888764
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.3e-15 Score=140.43 Aligned_cols=227 Identities=16% Similarity=0.174 Sum_probs=141.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC-CCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA-DAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~-~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++|+++||||+|+||.+++++|++.|++| +++.|+. ......+++.+++ .. ...++.
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~v---v~i~~~~~~~~~~~~~~~~~l---------~~---------~~~~~~ 64 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKA---VAIHYNSAASKADAEETVAAV---------KA---------AGAKAV 64 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcE---EEEecCCccchHHHHHHHHHH---------HH---------hCCcEE
Confidence 467999999999999999999999999753 5555432 2222222222111 11 024678
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-c
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-K 153 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~ 153 (492)
.+.+|+++ .+..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+.... .
T Consensus 65 ~~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~ 137 (257)
T PRK12744 65 AFQADLTT-------AAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND 137 (257)
T ss_pred EEecCcCC-------HHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc
Confidence 89999994 33333333 368999999997421 13467789999999999999886531 2
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++++++|..+.... ..
T Consensus 138 ~~~iv~~~ss~~~~~~--------------------------------------------------------------~~ 155 (257)
T PRK12744 138 NGKIVTLVTSLLGAFT--------------------------------------------------------------PF 155 (257)
T ss_pred CCCEEEEecchhcccC--------------------------------------------------------------CC
Confidence 2356665332222111 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..|.+.+.+ ..++++++++|+.|.++...+... ..... ... .. ....+.....+
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~--~~~-~~--~~~~~~~~~~~ 223 (257)
T PRK12744 156 YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-------AEAVA--YHK-TA--AALSPFSKTGL 223 (257)
T ss_pred cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-------cchhh--ccc-cc--ccccccccCCC
Confidence 357999999999998866 247999999999997764322110 00000 000 00 00111111247
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++|+|+++..++.. .... . ++++++.++
T Consensus 224 ~~~~dva~~~~~l~~~-~~~~-~-g~~~~~~gg 253 (257)
T PRK12744 224 TDIEDIVPFIRFLVTD-GWWI-T-GQTILINGG 253 (257)
T ss_pred CCHHHHHHHHHHhhcc-ccee-e-cceEeecCC
Confidence 7899999999998873 2111 1 678888876
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-15 Score=145.67 Aligned_cols=158 Identities=16% Similarity=0.218 Sum_probs=114.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++|+||||||+||++++++|++.|+ +|+++.|+... .+.+. ..++.++.
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~---~Vi~~~r~~~~---~~~l~------------------------~~~~~~~~ 53 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGW---RVFATCRKEED---VAALE------------------------AEGLEAFQ 53 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH------------------------HCCceEEE
Confidence 67999999999999999999999986 56888886432 11111 13577899
Q ss_pred cCCCCCCCCCCchhhHHHhc--------cCccEEEEcccccCc-------chhHHHHHHHhHHH----HHHHHHHHHhcc
Q 037479 92 GDITREDLGVKDSNLREEMW--------NKLDVVINLAATTNF-------DERYDVALDLNTFG----AKHVLNFSKKCA 152 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~--------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~~a~~~~ 152 (492)
+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.| ++.++..+++.
T Consensus 54 ~Dl~d-------~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~- 125 (277)
T PRK05993 54 LDYAE-------PESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ- 125 (277)
T ss_pred ccCCC-------HHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-
Confidence 99994 33332322 358999999986532 13467789999999 55666666665
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 126 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 143 (277)
T PRK05993 126 GQGRIVQCSSILGLVPM--------------------------------------------------------------K 143 (277)
T ss_pred CCCEEEEECChhhcCCC--------------------------------------------------------------C
Confidence 55789999995433111 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
....|+.||+..|.+.+.+ ..|+++++++|+.|-.+.
T Consensus 144 ~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 144 YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence 3468999999999988754 458999999999886553
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-14 Score=136.32 Aligned_cols=210 Identities=15% Similarity=0.071 Sum_probs=138.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|.+|+|+||||||+||++++++|++.|+ +|+++.|+.... ....+
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~---~v~~~~r~~~~~--------------------------------~~~~~ 45 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGH---QVIGIARSAIDD--------------------------------FPGEL 45 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCcccc--------------------------------cCceE
Confidence 3578999999999999999999999996 568888865421 11146
Q ss_pred EecCCCCCCCCCCchhhHHHhcc------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.+...+++|+.|+.++.+.+... .+
T Consensus 46 ~~~D~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 118 (234)
T PRK07577 46 FACDLAD-------IEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE 118 (234)
T ss_pred EEeeCCC-------HHHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 7899994 333334333 58999999997543 2345678899999988887766431 14
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||...++.. .
T Consensus 119 ~~~iv~~sS~~~~~~~---------------------------------------------------------------~ 135 (234)
T PRK07577 119 QGRIVNICSRAIFGAL---------------------------------------------------------------D 135 (234)
T ss_pred CcEEEEEccccccCCC---------------------------------------------------------------C
Confidence 5689999997654321 2
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..|.+++.+ ..+++++++||+.+..+..... . ............. ......
T Consensus 136 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~----~--~~~~~~~~~~~~~---------~~~~~~ 200 (234)
T PRK07577 136 RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQT----R--PVGSEEEKRVLAS---------IPMRRL 200 (234)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccc----c--ccchhHHHHHhhc---------CCCCCC
Confidence 357999999999887754 3589999999999876542100 0 0000111011100 001123
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+|+|++++.++....... . +..+.+.++
T Consensus 201 ~~~~~~a~~~~~l~~~~~~~~-~-g~~~~~~g~ 231 (234)
T PRK07577 201 GTPEEVAAAIAFLLSDDAGFI-T-GQVLGVDGG 231 (234)
T ss_pred cCHHHHHHHHHHHhCcccCCc-c-ceEEEecCC
Confidence 467999999998886432222 1 678887665
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.7e-15 Score=140.10 Aligned_cols=198 Identities=16% Similarity=0.111 Sum_probs=134.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+++||||||++|+.++++|++.|. +|+++.|+... .+.+.++ +.+ ...++.++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~~ 60 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW---DLALVARSQDA---LEALAAE---------LRS---------TGVKAAAY 60 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHh---------CCCcEEEE
Confidence 468999999999999999999999996 56889886532 1112111 110 12468889
Q ss_pred ecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 91 PGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
.+|+++ .+....++ .++|+|||+||.... .+.++..+++|+.++.++++.+... .+
T Consensus 61 ~~D~~~-------~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 133 (241)
T PRK07454 61 SIDLSN-------PEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG 133 (241)
T ss_pred EccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC
Confidence 999995 33332333 358999999996532 1356778999999999888776432 13
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||...++.. ..
T Consensus 134 ~~~iv~isS~~~~~~~--------------------------------------------------------------~~ 151 (241)
T PRK07454 134 GGLIINVSSIAARNAF--------------------------------------------------------------PQ 151 (241)
T ss_pred CcEEEEEccHHhCcCC--------------------------------------------------------------CC
Confidence 4689999997655321 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+.+.. ..+++++++||+.+-.+.... . . . . . .. ...-.
T Consensus 152 ~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~------~--~---~-----~--~-~~-----~~~~~ 207 (241)
T PRK07454 152 WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT------E--T---V-----Q--A-DF-----DRSAM 207 (241)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc------c--c---c-----c--c-cc-----ccccC
Confidence 457999999999887654 358999999999987654211 0 0 0 0 0 00 00135
Q ss_pred eehhhhhhHHHHHHHhh
Q 037479 309 IPADMVVNAIVVAVVAH 325 (492)
Q Consensus 309 v~vddva~~ii~~~~~~ 325 (492)
++.+|+|++++.++..+
T Consensus 208 ~~~~~va~~~~~l~~~~ 224 (241)
T PRK07454 208 LSPEQVAQTILHLAQLP 224 (241)
T ss_pred CCHHHHHHHHHHHHcCC
Confidence 78999999999998743
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.3e-15 Score=140.38 Aligned_cols=226 Identities=12% Similarity=0.110 Sum_probs=140.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||.+++++|++.|++| .+..++... ..+... ..+... ..++..
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v---~~~~~~~~~--~~~~~~---------~~~~~~---------~~~~~~ 58 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALV---AIHYGNRKE--EAEETV---------YEIQSN---------GGSAFS 58 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeE---EEEcCCCHH--HHHHHH---------HHHHhc---------CCceEE
Confidence 568999999999999999999999999643 554432211 111111 111111 135677
Q ss_pred EecCCCCCCCCCCchhhHHHhc---------cCccEEEEcccccCc---c----hhHHHHHHHhHHHHHHHHHHHHhc-c
Q 037479 90 VPGDITREDLGVKDSNLREEMW---------NKLDVVINLAATTNF---D----ERYDVALDLNTFGAKHVLNFSKKC-A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~---------~~vd~Vih~Aa~~~~---~----~~~~~~~~~Nv~gt~~ll~~a~~~-~ 152 (492)
+.+|+++.+- .....+.+. .++|++||+||.... . +.++..+++|+.|+..+++.+... .
T Consensus 59 ~~~D~~~~~~---~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 135 (252)
T PRK12747 59 IGANLESLHG---VEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR 135 (252)
T ss_pred EecccCCHHH---HHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 8899985421 011111111 269999999996422 1 346788899999999999877653 2
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
.-.++|++||....... .
T Consensus 136 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 153 (252)
T PRK12747 136 DNSRIINISSAATRISL--------------------------------------------------------------P 153 (252)
T ss_pred cCCeEEEECCcccccCC--------------------------------------------------------------C
Confidence 23489999997543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+++.+ ..++++..+.|+.|.++..... ... ......... . .....
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~---~~~-----~~~~~~~~~-~-------~~~~~ 217 (252)
T PRK12747 154 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL---LSD-----PMMKQYATT-I-------SAFNR 217 (252)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc---ccC-----HHHHHHHHh-c-------CcccC
Confidence 2357999999999888765 4589999999999987653211 010 011111100 0 01124
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|+++..++....... . +.++.+.++
T Consensus 218 ~~~~~dva~~~~~l~s~~~~~~-~-G~~i~vdgg 249 (252)
T PRK12747 218 LGEVEDIADTAAFLASPDSRWV-T-GQLIDVSGG 249 (252)
T ss_pred CCCHHHHHHHHHHHcCccccCc-C-CcEEEecCC
Confidence 6788999999988875322212 1 677777665
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=140.08 Aligned_cols=227 Identities=16% Similarity=0.123 Sum_probs=142.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++||||||+||++++++|++.|+ +|+++.|+... +...+++ .. ...++.+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~---~Vv~~~r~~~~----~~~~~~~---------~~---------~~~~~~~ 58 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGA---NLILLDISPEI----EKLADEL---------CG---------RGHRCTA 58 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCHHH----HHHHHHH---------HH---------hCCceEE
Confidence 5689999999999999999999999996 45777776421 1111011 00 0246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+..+.++ ..+|+|||+||..... +.++..+++|+.|+..+++.+... .
T Consensus 59 ~~~Dl~~-------~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (263)
T PRK08226 59 VVADVRD-------PASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR 131 (263)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 9999994 33333433 3689999999975321 345667999999999999887642 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||........ .
T Consensus 132 ~~~~iv~isS~~~~~~~~-------------------------------------------------------------~ 150 (263)
T PRK08226 132 KDGRIVMMSSVTGDMVAD-------------------------------------------------------------P 150 (263)
T ss_pred CCcEEEEECcHHhcccCC-------------------------------------------------------------C
Confidence 345899999853321100 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..|.+++.+ ..++++..++|+.|.++........... .....++..+..+. ....
T Consensus 151 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~---------p~~~ 220 (263)
T PRK08226 151 GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNP-EDPESVLTEMAKAI---------PLRR 220 (263)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccC-CCcHHHHHHHhccC---------CCCC
Confidence 2357999999988888755 3479999999999987643221111000 11112222222111 1113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+.+.+|+|++++.++....... . +.++.+.++
T Consensus 221 ~~~~~~va~~~~~l~~~~~~~~-~-g~~i~~dgg 252 (263)
T PRK08226 221 LADPLEVGELAAFLASDESSYL-T-GTQNVIDGG 252 (263)
T ss_pred CCCHHHHHHHHHHHcCchhcCC-c-CceEeECCC
Confidence 5688999999888775322211 1 666666665
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=137.84 Aligned_cols=219 Identities=20% Similarity=0.250 Sum_probs=140.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE-EecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLL-LRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l-vR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+.+++|+||||||+||+.+++.|++.|++ |+++ .|+... .+.+.. .+.. ...++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~---v~~~~~r~~~~---~~~~~~---------~~~~---------~~~~~~ 58 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAK---VVIAYDINEEA---AQELLE---------EIKE---------EGGDAI 58 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHH---------HHHh---------cCCeEE
Confidence 45789999999999999999999998864 4666 665322 111110 0111 124688
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
++.+|+++ .+.+..+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 59 ~~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 131 (247)
T PRK05565 59 AVKADVSS-------EEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIK 131 (247)
T ss_pred EEECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999995 333333333 79999999997632 1346778999999999988887643
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+.++||++||.......
T Consensus 132 ~~~~~~v~~sS~~~~~~~-------------------------------------------------------------- 149 (247)
T PRK05565 132 RKSGVIVNISSIWGLIGA-------------------------------------------------------------- 149 (247)
T ss_pred cCCcEEEEECCHhhccCC--------------------------------------------------------------
Confidence 134679999986544221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+++.. ..+++++++||+.+-.+....... ........ .....
T Consensus 150 ~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~---------~~~~~~~~---------~~~~~ 211 (247)
T PRK05565 150 SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE---------EDKEGLAE---------EIPLG 211 (247)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh---------HHHHHHHh---------cCCCC
Confidence 11246888988777666544 458999999999886654322110 00000000 00112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+...+|++++++.++........ ++++++.++
T Consensus 212 ~~~~~~~va~~~~~l~~~~~~~~~--g~~~~~~~~ 244 (247)
T PRK05565 212 RLGKPEEIAKVVLFLASDDASYIT--GQIITVDGG 244 (247)
T ss_pred CCCCHHHHHHHHHHHcCCccCCcc--CcEEEecCC
Confidence 356789999999888864332222 677777665
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-14 Score=138.32 Aligned_cols=202 Identities=17% Similarity=0.147 Sum_probs=131.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+||||||+||+.++++|++.|. +|++..|+... .+.+. ..++.. ..++.++.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~---~V~~~~r~~~~---~~~~~---------~~l~~~---------~~~~~~~~~ 56 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW---RLALADVNEEG---GEETL---------KLLREA---------GGDGFYQRC 56 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCceEEEEc
Confidence 5899999999999999999999996 45777776432 11111 111111 246788999
Q ss_pred CCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHH----Hhcccc
Q 037479 93 DITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFS----KKCAKL 154 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a----~~~~~~ 154 (492)
|+++ .+..+.++ .++|+|||+||..... +.++..+++|+.|+.++.+.+ ++. +.
T Consensus 57 D~~~-------~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~ 128 (270)
T PRK05650 57 DVRD-------YSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KS 128 (270)
T ss_pred cCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CC
Confidence 9994 33333333 3699999999976431 345677899999888876654 443 45
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... ...
T Consensus 129 ~~iv~vsS~~~~~~~--------------------------------------------------------------~~~ 146 (270)
T PRK05650 129 GRIVNIASMAGLMQG--------------------------------------------------------------PAM 146 (270)
T ss_pred CEEEEECChhhcCCC--------------------------------------------------------------CCc
Confidence 789999986544221 124
Q ss_pred chHHHHHHHHHHHHHH----h-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEH----L-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~----~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+.+. + ..++++++++|+.+.++......... ......+.... ....+
T Consensus 147 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~-------------~~~~~ 210 (270)
T PRK05650 147 SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPN---PAMKAQVGKLL-------------EKSPI 210 (270)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCc---hhHHHHHHHHh-------------hcCCC
Confidence 5799999986655543 3 35899999999999876543221110 11111111110 11347
Q ss_pred ehhhhhhHHHHHHHh
Q 037479 310 PADMVVNAIVVAVVA 324 (492)
Q Consensus 310 ~vddva~~ii~~~~~ 324 (492)
+++|+|+.++.++.+
T Consensus 211 ~~~~vA~~i~~~l~~ 225 (270)
T PRK05650 211 TAADIADYIYQQVAK 225 (270)
T ss_pred CHHHHHHHHHHHHhC
Confidence 899999999999873
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.5e-15 Score=140.62 Aligned_cols=218 Identities=18% Similarity=0.078 Sum_probs=135.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE-EecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLL-LRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l-vR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
++++||||+|+||++++++|++.|++| .++ .|+.. ..+.+..+ +.. ...++..+.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v---~~~~~~~~~---~~~~~~~~---------~~~---------~~~~~~~~~ 57 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTV---AVNYQQNLH---AAQEVVNL---------ITQ---------AGGKAFVLQ 57 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEE---EEEeCCChH---HHHHHHHH---------HHh---------CCCeEEEEE
Confidence 589999999999999999999999744 443 34321 11111101 110 024578899
Q ss_pred cCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc----
Q 037479 92 GDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA---- 152 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~---- 152 (492)
+|+++ .+..+.+++ .+|+|||+|+.... .+.++..+++|+.|+..+++.+....
T Consensus 58 ~D~~d-------~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 130 (247)
T PRK09730 58 ADISD-------ENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKH 130 (247)
T ss_pred ccCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 99994 443434433 57899999996421 13456789999999988877654421
Q ss_pred --cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 153 --KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 153 --~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
+..+||++||........
T Consensus 131 ~~~~g~~v~~sS~~~~~~~~------------------------------------------------------------ 150 (247)
T PRK09730 131 GGSGGAIVNVSSAASRLGAP------------------------------------------------------------ 150 (247)
T ss_pred CCCCcEEEEECchhhccCCC------------------------------------------------------------
Confidence 124699999964432110
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.+|+..|.+++.+ ..+++++++||+.++++..... ...........+. +.
T Consensus 151 -~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~--------~~~~~~~~~~~~~----~~----- 212 (247)
T PRK09730 151 -GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG--------GEPGRVDRVKSNI----PM----- 212 (247)
T ss_pred -CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC--------CCHHHHHHHHhcC----CC-----
Confidence 11246999999999887654 3589999999999999854210 1111111111111 00
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.-..+++|++++++.++....... . +..|++.++
T Consensus 213 ~~~~~~~dva~~~~~~~~~~~~~~-~-g~~~~~~g~ 246 (247)
T PRK09730 213 QRGGQPEEVAQAIVWLLSDKASYV-T-GSFIDLAGG 246 (247)
T ss_pred CCCcCHHHHHHHHHhhcChhhcCc-c-CcEEecCCC
Confidence 012368999999998886432222 1 667777654
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.2e-15 Score=143.25 Aligned_cols=223 Identities=15% Similarity=0.192 Sum_probs=144.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|++ |++..|+..... .+.+.+ . + .+ ...++..
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~---Vi~~~~~~~~~~-~~~~~~-~--------~-~~--------~~~~~~~ 104 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGAD---VAISYLPVEEED-AQDVKK-I--------I-EE--------CGRKAVL 104 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEecCCcchhh-HHHHHH-H--------H-HH--------cCCeEEE
Confidence 57799999999999999999999999975 466555433211 122221 0 0 01 1245778
Q ss_pred EecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc-cc
Q 037479 90 VPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTN----F----DERYDVALDLNTFGAKHVLNFSKKC-AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (492)
+.+|+++ .+....+ +.++|++||+||... + .+.+...+++|+.|+..+++++... ..
T Consensus 105 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 177 (294)
T PRK07985 105 LPGDLSD-------EKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK 177 (294)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc
Confidence 9999994 3333233 246899999998632 1 2456788999999999999988753 12
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||...+... ..
T Consensus 178 ~g~iv~iSS~~~~~~~--------------------------------------------------------------~~ 195 (294)
T PRK07985 178 GASIITTSSIQAYQPS--------------------------------------------------------------PH 195 (294)
T ss_pred CCEEEEECCchhccCC--------------------------------------------------------------CC
Confidence 2579999997654321 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+.+.+ ..++++.+++|+.|.++.... +. ........+... . ....+
T Consensus 196 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~--~~-----~~~~~~~~~~~~----~-----~~~r~ 259 (294)
T PRK07985 196 LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS--GG-----QTQDKIPQFGQQ----T-----PMKRA 259 (294)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccc--cC-----CCHHHHHHHhcc----C-----CCCCC
Confidence 357999999988887655 358999999999998875321 00 001111111110 0 11134
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+|+|++++.++....... . +.++.+.++
T Consensus 260 ~~pedva~~~~fL~s~~~~~i-t-G~~i~vdgG 290 (294)
T PRK07985 260 GQPAELAPVYVYLASQESSYV-T-AEVHGVCGG 290 (294)
T ss_pred CCHHHHHHHHHhhhChhcCCc-c-ccEEeeCCC
Confidence 568999999998886433221 1 678887776
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-14 Score=136.86 Aligned_cols=214 Identities=18% Similarity=0.223 Sum_probs=139.0
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|+||||+|+||+++++.|+++|+ +|+++.|+... ..+.+.++ +.. . ..++.++.+|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~---~v~~~~r~~~~--~~~~~~~~---------~~~-~--------~~~~~~~~~D~ 57 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA---KVIITYRSSEE--GAEEVVEE---------LKA-Y--------GVKALGVVCDV 57 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCchh--HHHHHHHH---------HHh-c--------CCceEEEEecC
Confidence 68999999999999999999996 45888886521 11111111 111 0 13578899999
Q ss_pred CCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---ccceeE
Q 037479 95 TREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AKLIVL 157 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~ 157 (492)
++ .+.++.++ ..+|+|||+||.... .+.+...+++|+.++.++++.+.+. .+.++|
T Consensus 58 ~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 130 (239)
T TIGR01830 58 SD-------REDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRI 130 (239)
T ss_pred CC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEE
Confidence 94 44343443 357999999997532 1446778999999999999988753 245689
Q ss_pred EEeeecee-ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 158 VHVSTAFV-WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 158 V~vST~~v-~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
|++||... ++.. ....
T Consensus 131 v~~sS~~~~~g~~---------------------------------------------------------------~~~~ 147 (239)
T TIGR01830 131 INISSVVGLMGNA---------------------------------------------------------------GQAN 147 (239)
T ss_pred EEECCccccCCCC---------------------------------------------------------------CCch
Confidence 99999543 3321 2357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
|+.+|...+.+++.+ ..+++++++||+.+.++...+.+ ..+...+.. .. + ..-+.++
T Consensus 148 y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~---------~~~~~~~~~-~~---~-----~~~~~~~ 209 (239)
T TIGR01830 148 YAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLS---------EKVKKKILS-QI---P-----LGRFGTP 209 (239)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcC---------hHHHHHHHh-cC---C-----cCCCcCH
Confidence 999999888776654 35899999999987654332211 111111111 10 0 1125678
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|++++++.++........ +++||+.++
T Consensus 210 ~~~a~~~~~~~~~~~~~~~--g~~~~~~~g 237 (239)
T TIGR01830 210 EEVANAVAFLASDEASYIT--GQVIHVDGG 237 (239)
T ss_pred HHHHHHHHHHhCcccCCcC--CCEEEeCCC
Confidence 9999999888753222222 789999765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-14 Score=142.06 Aligned_cols=195 Identities=17% Similarity=0.177 Sum_probs=132.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||||+||+++++.|++.|+ +|+++.|+... .+.+.++ +.+ ...++.+
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~---~Vi~~~R~~~~---l~~~~~~---------l~~---------~~~~~~~ 93 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGA---TVVAVARREDL---LDAVADR---------ITR---------AGGDAMA 93 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHh---------cCCcEEE
Confidence 4679999999999999999999999986 55888886421 1111111 111 0245778
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCcc---------hhHHHHHHHhHHHHHHHHHHHH----
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNFD---------ERYDVALDLNTFGAKHVLNFSK---- 149 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~~---------~~~~~~~~~Nv~gt~~ll~~a~---- 149 (492)
+.+|+++ .+....+++ ++|+|||+||..... +.++..+++|+.|+.++++.+.
T Consensus 94 ~~~Dl~d-------~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 166 (293)
T PRK05866 94 VPCDLSD-------LDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGML 166 (293)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999994 443434443 799999999975321 3346678999999888887654
Q ss_pred hcccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 150 KCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 150 ~~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
+. +..++|++||..+.....
T Consensus 167 ~~-~~g~iv~isS~~~~~~~~----------------------------------------------------------- 186 (293)
T PRK05866 167 ER-GDGHIINVATWGVLSEAS----------------------------------------------------------- 186 (293)
T ss_pred hc-CCcEEEEECChhhcCCCC-----------------------------------------------------------
Confidence 32 456899999965432110
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
...+.|+.||+..+.+++.. ..++++++++|+.|-.+...+.. .. .+
T Consensus 187 --p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~----------------------~~--~~-- 238 (293)
T PRK05866 187 --PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK----------------------AY--DG-- 238 (293)
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc----------------------cc--cC--
Confidence 12357999999998887654 35899999999987655332100 00 00
Q ss_pred ccceeehhhhhhHHHHHHHh
Q 037479 305 IVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~ 324 (492)
...+..++||+.++.++.+
T Consensus 239 -~~~~~pe~vA~~~~~~~~~ 257 (293)
T PRK05866 239 -LPALTADEAAEWMVTAART 257 (293)
T ss_pred -CCCCCHHHHHHHHHHHHhc
Confidence 1236789999999998873
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.9e-15 Score=141.89 Aligned_cols=191 Identities=16% Similarity=0.076 Sum_probs=128.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||||.||+.++++|++.|++ |.+..|+... .+.+.. + ..++.+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~---v~~~~r~~~~---~~~~~~-------------~---------~~~~~~ 54 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGAR---VAIGDLDEAL---AKETAA-------------E---------LGLVVG 54 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHH-------------H---------hccceE
Confidence 35789999999999999999999999964 5777775422 111110 0 024678
Q ss_pred EecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++++ +..+.+ ..++|++||+||.... .+.+...+++|+.|+..+++.+... .
T Consensus 55 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 127 (273)
T PRK07825 55 GPLDVTDP-------ASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR 127 (273)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999953 332222 2468999999997532 1346778999999999988776432 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 128 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 145 (273)
T PRK07825 128 GRGHVVNVASLAGKIPV--------------------------------------------------------------P 145 (273)
T ss_pred CCCEEEEEcCccccCCC--------------------------------------------------------------C
Confidence 45689999996543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..|+++++++|+.|-.+..... .......
T Consensus 146 ~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~---------------------------~~~~~~~ 198 (273)
T PRK07825 146 GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT---------------------------GGAKGFK 198 (273)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc---------------------------ccccCCC
Confidence 2357999998776655433 4589999999988754322100 0011124
Q ss_pred eeehhhhhhHHHHHHHh
Q 037479 308 VIPADMVVNAIVVAVVA 324 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~ 324 (492)
+++++|+|+.++.++.+
T Consensus 199 ~~~~~~va~~~~~~l~~ 215 (273)
T PRK07825 199 NVEPEDVAAAIVGTVAK 215 (273)
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 68899999999998873
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.3e-15 Score=139.36 Aligned_cols=215 Identities=13% Similarity=0.119 Sum_probs=136.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|.+ |+++.|+... ..+.+. .+ .++..
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~---v~~~~~~~~~--~~~~l~-------------~~----------~~~~~ 55 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGAN---VRFTYAGSKD--AAERLA-------------QE----------TGATA 55 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCCHH--HHHHHH-------------HH----------hCCeE
Confidence 56899999999999999999999999864 4565554221 111111 11 13467
Q ss_pred EecCCCCCCCCCCchhhHHHhc---cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-cccceeEE
Q 037479 90 VPGDITREDLGVKDSNLREEMW---NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK-CAKLIVLV 158 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~---~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~~~V 158 (492)
+.+|+++ .+....++ .++|++||+||.... .+.++..+++|+.|+..+++.+.. +..-.++|
T Consensus 56 ~~~D~~~-------~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 128 (237)
T PRK12742 56 VQTDSAD-------RDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRII 128 (237)
T ss_pred EecCCCC-------HHHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 7899984 33333333 358999999987532 135678899999999998766554 32335899
Q ss_pred EeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHH
Q 037479 159 HVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238 (492)
Q Consensus 159 ~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~ 238 (492)
++||...... +. .....|+
T Consensus 129 ~isS~~~~~~--------~~-----------------------------------------------------~~~~~Y~ 147 (237)
T PRK12742 129 IIGSVNGDRM--------PV-----------------------------------------------------AGMAAYA 147 (237)
T ss_pred EEeccccccC--------CC-----------------------------------------------------CCCcchH
Confidence 9998543110 00 2346799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 239 FTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 239 ~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
.||+..|.+++.+ ..++.+++++|+.|..+..... ......... . .+ ..-+...+|
T Consensus 148 ~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~-------~~~~~~~~~----~---~~-----~~~~~~p~~ 208 (237)
T PRK12742 148 ASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN-------GPMKDMMHS----F---MA-----IKRHGRPEE 208 (237)
T ss_pred HhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc-------cHHHHHHHh----c---CC-----CCCCCCHHH
Confidence 9999999988764 3579999999998876543110 000011100 0 00 112457899
Q ss_pred hhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 314 VVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 314 va~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++..++....... . +.++.+.++
T Consensus 209 ~a~~~~~l~s~~~~~~-~-G~~~~~dgg 234 (237)
T PRK12742 209 VAGMVAWLAGPEASFV-T-GAMHTIDGA 234 (237)
T ss_pred HHHHHHHHcCcccCcc-c-CCEEEeCCC
Confidence 9999988876432221 1 666766554
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=137.88 Aligned_cols=217 Identities=15% Similarity=0.148 Sum_probs=140.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+++||||+|+||++++++|++.|++| ++..|+... ..+.+. .+ ...++.++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~v---v~~~~~~~~--~~~~~~-------------~~--------~~~~~~~~ 57 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARV---VVNYHQSED--AAEALA-------------DE--------LGDRAIAL 57 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeE---EEEcCCCHH--HHHHHH-------------HH--------hCCceEEE
Confidence 56899999999999999999999999744 555443221 111111 11 12467889
Q ss_pred ecCCCCCCCCCCchhhHHHhcc-------C-ccEEEEcccccC---------c----chhHHHHHHHhHHHHHHHHHHHH
Q 037479 91 PGDITREDLGVKDSNLREEMWN-------K-LDVVINLAATTN---------F----DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~-------~-vd~Vih~Aa~~~---------~----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
.+|+++ .+....+++ . +|++||+|+... + .+.+...+++|+.|+.++++.+.
T Consensus 58 ~~D~~~-------~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (253)
T PRK08642 58 QADVTD-------REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAAL 130 (253)
T ss_pred EcCCCC-------HHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHH
Confidence 999994 333333332 2 999999998521 1 13456789999999999999886
Q ss_pred hc---ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 150 KC---AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 150 ~~---~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
.. .+..++|++||......
T Consensus 131 ~~~~~~~~g~iv~iss~~~~~~---------------------------------------------------------- 152 (253)
T PRK08642 131 PGMREQGFGRIINIGTNLFQNP---------------------------------------------------------- 152 (253)
T ss_pred HHHHhcCCeEEEEECCccccCC----------------------------------------------------------
Confidence 42 13468999998432211
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~ 301 (492)
..+.+.|+.||+..|.+++.+ ..++.+..++|+.|..+.... . ........+.. ..
T Consensus 153 ----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~---~-----~~~~~~~~~~~-~~------ 213 (253)
T PRK08642 153 ----VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASA---A-----TPDEVFDLIAA-TT------ 213 (253)
T ss_pred ----CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhc---c-----CCHHHHHHHHh-cC------
Confidence 023468999999999999876 357999999999886543211 0 01111111111 11
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+...+|+++++..++....... . |.++.+.++
T Consensus 214 --~~~~~~~~~~va~~~~~l~~~~~~~~-~-G~~~~vdgg 249 (253)
T PRK08642 214 --PLRKVTTPQEFADAVLFFASPWARAV-T-GQNLVVDGG 249 (253)
T ss_pred --CcCCCCCHHHHHHHHHHHcCchhcCc-c-CCEEEeCCC
Confidence 11247889999999998886432222 2 778877765
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.6e-15 Score=140.00 Aligned_cols=189 Identities=17% Similarity=0.201 Sum_probs=128.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|+||||||+||+++++.|++.|+ +|+++.|+... .+.+. ++.+. ..++.++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~---~v~~~~r~~~~---~~~~~-------------~~~~~------~~~~~~~~ 56 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA---TLGLVARRTDA---LQAFA-------------ARLPK------AARVSVYA 56 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------Hhccc------CCeeEEEE
Confidence 47999999999999999999999996 45888886321 11111 11100 12688899
Q ss_pred cCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc----c----hhHHHHHHHhHHHHHHHHHHH----Hhcc
Q 037479 92 GDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF----D----ERYDVALDLNTFGAKHVLNFS----KKCA 152 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a----~~~~ 152 (492)
+|+++ .+...+++ ..+|++||+||.... . +.+...+++|+.|+.++++.. ++.
T Consensus 57 ~Dl~~-------~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~- 128 (257)
T PRK07024 57 ADVRD-------ADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA- 128 (257)
T ss_pred cCCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-
Confidence 99995 33333333 348999999996431 1 346788999999999987743 333
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 129 ~~~~iv~isS~~~~~~~--------------------------------------------------------------~ 146 (257)
T PRK07024 129 RRGTLVGIASVAGVRGL--------------------------------------------------------------P 146 (257)
T ss_pred CCCEEEEEechhhcCCC--------------------------------------------------------------C
Confidence 44689999885443111 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+.+.+ ..+++++++||+.|.++...... . ..-.
T Consensus 147 ~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------------------~--------~~~~ 198 (257)
T PRK07024 147 GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP--------------------Y--------PMPF 198 (257)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC--------------------C--------CCCC
Confidence 2357999999999988654 35899999999999875431100 0 0001
Q ss_pred eeehhhhhhHHHHHHH
Q 037479 308 VIPADMVVNAIVVAVV 323 (492)
Q Consensus 308 ~v~vddva~~ii~~~~ 323 (492)
+++.+++++.++.++.
T Consensus 199 ~~~~~~~a~~~~~~l~ 214 (257)
T PRK07024 199 LMDADRFAARAARAIA 214 (257)
T ss_pred ccCHHHHHHHHHHHHh
Confidence 3679999999988886
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-14 Score=136.21 Aligned_cols=220 Identities=11% Similarity=0.076 Sum_probs=138.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|+++||||||+||++++++|++.|.. |+++.++... ...+.+. .+.. ...++..
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~---vv~~~~~~~~-~~~~~~~----------~~~~---------~~~~~~~ 57 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFK---VVAGCGPNSP-RRVKWLE----------DQKA---------LGFDFIA 57 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCE---EEEEcCCChH-HHHHHHH----------HHHh---------cCCcEEE
Confidence 46899999999999999999999999964 4554442211 1111111 1111 0245778
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+..+.++ .++|+|||+||.... .+.+...+++|+.|+..+.+.+... .
T Consensus 58 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 130 (246)
T PRK12938 58 SEGNVGD-------WDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER 130 (246)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 8999994 43333333 368999999997532 2456788999999988876665431 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 131 ~~~~iv~isS~~~~~~~--------------------------------------------------------------~ 148 (246)
T PRK12938 131 GWGRIINISSVNGQKGQ--------------------------------------------------------------F 148 (246)
T ss_pred CCeEEEEEechhccCCC--------------------------------------------------------------C
Confidence 45689999986433111 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..+.+.+.+ ..++++++++|+.+.++..... ....+..+... .....
T Consensus 149 ~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---------~~~~~~~~~~~---------~~~~~ 210 (246)
T PRK12938 149 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---------RPDVLEKIVAT---------IPVRR 210 (246)
T ss_pred CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---------ChHHHHHHHhc---------CCccC
Confidence 3457999999877776554 3589999999999877643211 01111111111 11223
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++++++++..++........ +..+.+.++
T Consensus 211 ~~~~~~v~~~~~~l~~~~~~~~~--g~~~~~~~g 242 (246)
T PRK12938 211 LGSPDEIGSIVAWLASEESGFST--GADFSLNGG 242 (246)
T ss_pred CcCHHHHHHHHHHHcCcccCCcc--CcEEEECCc
Confidence 56789999999887754322221 677777654
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.8e-15 Score=140.42 Aligned_cols=200 Identities=16% Similarity=0.129 Sum_probs=128.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|+||||||+||+++++.|++.|+ +|+++.|+.... +.+. ..++..+.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~---~v~~~~r~~~~~---~~~~------------------------~~~~~~~~~ 52 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY---RVLAACRKPDDV---ARMN------------------------SLGFTGILL 52 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHh---HHHH------------------------hCCCeEEEe
Confidence 6899999999999999999999986 457788864221 1111 134677899
Q ss_pred CCCCCCCCCCchhhHHHh----ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHH----HHHHHhcccceeE
Q 037479 93 DITREDLGVKDSNLREEM----WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHV----LNFSKKCAKLIVL 157 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~----~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~l----l~~a~~~~~~~~~ 157 (492)
|+++++.- .+..+.+ ...+|.++|+||.... .+.++..+++|+.|+.++ ++.+++. +.+++
T Consensus 53 D~~~~~~~---~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~i 128 (256)
T PRK08017 53 DLDDPESV---ERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRI 128 (256)
T ss_pred ecCCHHHH---HHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEE
Confidence 99853210 0111111 1457999999996432 134567899999998876 4445544 55789
Q ss_pred EEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchH
Q 037479 158 VHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTY 237 (492)
Q Consensus 158 V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y 237 (492)
|++||.+..... ...+.|
T Consensus 129 v~~ss~~~~~~~--------------------------------------------------------------~~~~~Y 146 (256)
T PRK08017 129 VMTSSVMGLIST--------------------------------------------------------------PGRGAY 146 (256)
T ss_pred EEEcCcccccCC--------------------------------------------------------------CCccHH
Confidence 999996433211 234679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehh
Q 037479 238 VFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPAD 312 (492)
Q Consensus 238 ~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vd 312 (492)
+.||+..|.+.+.+ ..+++++++||+.+........... . ... .....+....+++++|
T Consensus 147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~----~-----------~~~-~~~~~~~~~~~~~~~~ 210 (256)
T PRK08017 147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT----Q-----------SDK-PVENPGIAARFTLGPE 210 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccch----h-----------hcc-chhhhHHHhhcCCCHH
Confidence 99999999887643 4589999999987654322111000 0 000 0011112234578999
Q ss_pred hhhhHHHHHHHh
Q 037479 313 MVVNAIVVAVVA 324 (492)
Q Consensus 313 dva~~ii~~~~~ 324 (492)
|+++++..++.+
T Consensus 211 d~a~~~~~~~~~ 222 (256)
T PRK08017 211 AVVPKLRHALES 222 (256)
T ss_pred HHHHHHHHHHhC
Confidence 999999998863
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-14 Score=137.47 Aligned_cols=216 Identities=14% Similarity=0.120 Sum_probs=141.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++++||||+|+||++++++|++.|+ +|+++.|+.. ...+.+..+. . ....++.++.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~---~vi~~~r~~~--~~~~~~~~~~---------~---------~~~~~~~~~~~ 59 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY---RVIATYFSGN--DCAKDWFEEY---------G---------FTEDQVRLKEL 59 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCcH--HHHHHHHHHh---------h---------ccCCeEEEEEc
Confidence 6899999999999999999999885 5688888753 1111111000 0 01256889999
Q ss_pred CCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhcccc
Q 037479 93 DITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKCAKL 154 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~ 154 (492)
|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++.+.+ ++. +.
T Consensus 60 D~~~-------~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~ 131 (245)
T PRK12824 60 DVTD-------TEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GY 131 (245)
T ss_pred CCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CC
Confidence 9994 33333333 358999999996532 2456778999999999986544 433 45
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.+||++||...+... ...
T Consensus 132 ~~iv~iss~~~~~~~--------------------------------------------------------------~~~ 149 (245)
T PRK12824 132 GRIINISSVNGLKGQ--------------------------------------------------------------FGQ 149 (245)
T ss_pred eEEEEECChhhccCC--------------------------------------------------------------CCC
Confidence 789999986544321 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+++.+ ..++++++++|+.+.++...... ......+.. ......+.
T Consensus 150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---------~~~~~~~~~---------~~~~~~~~ 211 (245)
T PRK12824 150 TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG---------PEVLQSIVN---------QIPMKRLG 211 (245)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---------HHHHHHHHh---------cCCCCCCC
Confidence 46999999888777654 34799999999998876543211 011111111 01122355
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++++++++..++........ ++++++.++
T Consensus 212 ~~~~va~~~~~l~~~~~~~~~--G~~~~~~~g 241 (245)
T PRK12824 212 TPEEIAAAVAFLVSEAAGFIT--GETISINGG 241 (245)
T ss_pred CHHHHHHHHHHHcCccccCcc--CcEEEECCC
Confidence 789999998877753322222 789999887
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=138.83 Aligned_cols=213 Identities=13% Similarity=0.062 Sum_probs=141.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||||+||++++++|++.|+ +|+++.|+... .. ...++.+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~---~v~~~~r~~~~-----~~------------------------~~~~~~~ 51 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGA---TVVVCGRRAPE-----TV------------------------DGRPAEF 51 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCChhh-----hh------------------------cCCceEE
Confidence 5689999999999999999999999986 45888886432 00 0246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+....
T Consensus 52 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 124 (252)
T PRK07856 52 HAADVRD-------PDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ 124 (252)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999994 33333443 357999999986432 13467889999999999999876521
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||.......
T Consensus 125 ~~~g~ii~isS~~~~~~~-------------------------------------------------------------- 142 (252)
T PRK07856 125 PGGGSIVNIGSVSGRRPS-------------------------------------------------------------- 142 (252)
T ss_pred CCCcEEEEEcccccCCCC--------------------------------------------------------------
Confidence 23579999986543211
Q ss_pred CCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
.....|+.||+..|.+++.+ ...+.+..++|+.|..+...... ........+..+ .+ ...
T Consensus 143 ~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~-------~~~~~~~~~~~~----~~-----~~~ 206 (252)
T PRK07856 143 PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHY-------GDAEGIAAVAAT----VP-----LGR 206 (252)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhc-------cCHHHHHHHhhc----CC-----CCC
Confidence 12467999999999998765 23489999999988765432110 000111111110 00 113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|++++++.++....... + +..+.+.++
T Consensus 207 ~~~p~~va~~~~~L~~~~~~~i-~-G~~i~vdgg 238 (252)
T PRK07856 207 LATPADIAWACLFLASDLASYV-S-GANLEVHGG 238 (252)
T ss_pred CcCHHHHHHHHHHHcCcccCCc-c-CCEEEECCC
Confidence 4567999999988775322222 2 778888776
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-14 Score=138.62 Aligned_cols=221 Identities=13% Similarity=0.128 Sum_probs=143.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|+ +|++..|+... .+.+.++ ++.. ..++..
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~---~vvl~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 62 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGA---EIIINDITAER---AELAVAK---------LRQE---------GIKAHA 62 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEcCCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 4689999999999999999999999996 45777776321 1111111 1110 145778
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+.+. .
T Consensus 63 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (254)
T PRK08085 63 APFNVTH-------KQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR 135 (254)
T ss_pred EecCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 8999995 33333333 358999999996432 2456788999999999988877653 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 136 ~~~~iv~isS~~~~~~~--------------------------------------------------------------~ 153 (254)
T PRK08085 136 QAGKIINICSMQSELGR--------------------------------------------------------------D 153 (254)
T ss_pred CCcEEEEEccchhccCC--------------------------------------------------------------C
Confidence 34589999985322110 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+++.+ ..++++.+++|+.+..+...+..+ ...+. ...... .....
T Consensus 154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-------~~~~~-~~~~~~--------~p~~~ 217 (254)
T PRK08085 154 TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-------DEAFT-AWLCKR--------TPAAR 217 (254)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-------CHHHH-HHHHhc--------CCCCC
Confidence 3457999999999998876 358999999999988775432211 01111 111100 11123
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+++++..++......-. +.+..+.++
T Consensus 218 ~~~~~~va~~~~~l~~~~~~~i~--G~~i~~dgg 249 (254)
T PRK08085 218 WGDPQELIGAAVFLSSKASDFVN--GHLLFVDGG 249 (254)
T ss_pred CcCHHHHHHHHHHHhCccccCCc--CCEEEECCC
Confidence 56789999998888764332211 566666554
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.9e-15 Score=144.94 Aligned_cols=175 Identities=17% Similarity=0.161 Sum_probs=116.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+.... +....+ ..++.+
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~---~Vv~~~R~~~~~---~~~~~~----------------------l~~v~~ 75 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGA---HVIVPARRPDVA---REALAG----------------------IDGVEV 75 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHH----------------------hhhCeE
Confidence 4689999999999999999999999996 458888864211 111100 023678
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-----chhHHHHHHHhHHHHHHHHHHH----Hhccc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-----DERYDVALDLNTFGAKHVLNFS----KKCAK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a----~~~~~ 153 (492)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+ ++. +
T Consensus 76 ~~~Dl~d-------~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~ 147 (315)
T PRK06196 76 VMLDLAD-------LESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-A 147 (315)
T ss_pred EEccCCC-------HHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-C
Confidence 9999994 44333333 468999999996432 2346778999999976666644 333 3
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||....... +.+..... ......
T Consensus 148 ~~~iV~vSS~~~~~~~---~~~~~~~~-----------------------------------------------~~~~~~ 177 (315)
T PRK06196 148 GARVVALSSAGHRRSP---IRWDDPHF-----------------------------------------------TRGYDK 177 (315)
T ss_pred CCeEEEECCHHhccCC---CCccccCc-----------------------------------------------cCCCCh
Confidence 3689999996432211 00000000 000123
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCC
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~ 270 (492)
...|+.||+..+.+.+.+ ..+++++++||+.|.++..
T Consensus 178 ~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 178 WLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 357999999999887654 3589999999999988754
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.6e-14 Score=136.96 Aligned_cols=187 Identities=14% Similarity=0.120 Sum_probs=130.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++++||||||+||++++++|++.|+ +|+++.|+.. ++. ++ ... ..++.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~---~V~~~~r~~~------~~~-~~---------~~~---------~~~~~~~~~ 53 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW---QVIACGRNQS------VLD-EL---------HTQ---------SANIFTLAF 53 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC---EEEEEECCHH------HHH-HH---------HHh---------cCCCeEEEe
Confidence 6899999999999999999999996 4588888632 211 11 000 145788999
Q ss_pred CCCCCCCCCCchhhHHHhcc----CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-cceeEEEe
Q 037479 93 DITREDLGVKDSNLREEMWN----KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-KLIVLVHV 160 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~----~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~V~v 160 (492)
|+++ .+..+.+++ .+|+++|+||...+ .+.++..+++|+.|+.++++.+.... +-.++|.+
T Consensus 54 D~~~-------~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~i 126 (240)
T PRK06101 54 DVTD-------HPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIV 126 (240)
T ss_pred eCCC-------HHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEE
Confidence 9994 444445554 36899999985432 13456789999999999999987631 23468888
Q ss_pred eeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 161 STAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 161 ST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
||....... .....|+.|
T Consensus 127 sS~~~~~~~--------------------------------------------------------------~~~~~Y~as 144 (240)
T PRK06101 127 GSIASELAL--------------------------------------------------------------PRAEAYGAS 144 (240)
T ss_pred echhhccCC--------------------------------------------------------------CCCchhhHH
Confidence 874321100 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhh
Q 037479 241 KVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVV 315 (492)
Q Consensus 241 K~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva 315 (492)
|+..|.+.+.+ ..+++++++||+.|.++...... . . ....++.+++|
T Consensus 145 K~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~--------------------~-----~---~~~~~~~~~~a 196 (240)
T PRK06101 145 KAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT--------------------F-----A---MPMIITVEQAS 196 (240)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC--------------------C-----C---CCcccCHHHHH
Confidence 99999987654 45899999999999876532100 0 0 00247899999
Q ss_pred hHHHHHHHh
Q 037479 316 NAIVVAVVA 324 (492)
Q Consensus 316 ~~ii~~~~~ 324 (492)
+.++.++..
T Consensus 197 ~~i~~~i~~ 205 (240)
T PRK06101 197 QEIRAQLAR 205 (240)
T ss_pred HHHHHHHhc
Confidence 999988874
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.6e-14 Score=135.85 Aligned_cols=220 Identities=17% Similarity=0.163 Sum_probs=143.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||++++++|++.|. +|+++.|+... .+++.+++ +. ...++..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~---~vv~~~r~~~~---~~~~~~~l---------~~---------~~~~~~~ 64 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINADA---ANHVVDEI---------QQ---------LGGQAFA 64 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 4689999999999999999999999996 45777775322 22221111 10 0245788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc---c---hhHHHHHHHhHHHHHHHHHHHHhcc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF---D---ERYDVALDLNTFGAKHVLNFSKKCA---K 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~---~---~~~~~~~~~Nv~gt~~ll~~a~~~~---~ 153 (492)
+.+|+++ .+....++ .++|+|||+||.... + +.++..+++|+.|+.++++.+.... +
T Consensus 65 ~~~D~~~-------~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (255)
T PRK06113 65 CRCDITS-------EQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC
Confidence 8999994 33333322 368999999997532 2 4566779999999999999986421 2
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||....... ..
T Consensus 138 ~~~iv~isS~~~~~~~--------------------------------------------------------------~~ 155 (255)
T PRK06113 138 GGVILTITSMAAENKN--------------------------------------------------------------IN 155 (255)
T ss_pred CcEEEEEecccccCCC--------------------------------------------------------------CC
Confidence 3489999996432111 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+++.. ..++.+.++.|+.+..+.... .. ...+....... .....+
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~---~~-----~~~~~~~~~~~---------~~~~~~ 218 (255)
T PRK06113 156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS---VI-----TPEIEQKMLQH---------TPIRRL 218 (255)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc---cc-----CHHHHHHHHhc---------CCCCCC
Confidence 457999999999998765 347999999999887653211 00 01111111110 011235
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+|++++++.++........ ++++++.++
T Consensus 219 ~~~~d~a~~~~~l~~~~~~~~~--G~~i~~~gg 249 (255)
T PRK06113 219 GQPQDIANAALFLCSPAASWVS--GQILTVSGG 249 (255)
T ss_pred cCHHHHHHHHHHHcCccccCcc--CCEEEECCC
Confidence 6789999999988863322221 788888877
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.6e-14 Score=135.90 Aligned_cols=218 Identities=15% Similarity=0.108 Sum_probs=138.4
Q ss_pred CCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcC------HHHH--HHHHhhcChhhHHHHHhcCCchh
Q 037479 11 ENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKS------ATVR--FHNEIIGKDLFRVLKEKNGTHLN 80 (492)
Q Consensus 11 ~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~------~~~r--~~~~~~~~~~f~~l~~~~~~~~~ 80 (492)
++++|||||||| .||.+++++|++.|+ +|+++.|+..+.. ..+. +.. .+. .
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~---~vi~~~r~~~~~~~~~~~~~~~~~~~~~---------~~~-~------ 64 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGI---DIFFTYWSPYDKTMPWGMHDKEPVLLKE---------EIE-S------ 64 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCC---cEEEEcCCccccccccccchhhHHHHHH---------HHH-h------
Confidence 578999999996 699999999999996 4588888632110 0000 110 010 0
Q ss_pred hhccCceEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHH
Q 037479 81 ALISEKITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLN 146 (492)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~ 146 (492)
...++.++.+|++++ +....++ ..+|+|||+||..... +.++..+++|+.|+..+++
T Consensus 65 --~~~~~~~~~~D~~~~-------~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 135 (256)
T PRK12748 65 --YGVRCEHMEIDLSQP-------YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSS 135 (256)
T ss_pred --cCCeEEEEECCCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 124688999999953 3222222 3689999999865321 3456779999999999998
Q ss_pred HHHhcc---cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhh
Q 037479 147 FSKKCA---KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDL 223 (492)
Q Consensus 147 ~a~~~~---~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (492)
.+.... +..++|++||...++..
T Consensus 136 ~~~~~~~~~~~~~iv~~ss~~~~~~~------------------------------------------------------ 161 (256)
T PRK12748 136 AFAKQYDGKAGGRIINLTSGQSLGPM------------------------------------------------------ 161 (256)
T ss_pred HHHHHhhhcCCeEEEEECCccccCCC------------------------------------------------------
Confidence 876421 23589999986544321
Q ss_pred hccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEE
Q 037479 224 GIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298 (492)
Q Consensus 224 ~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~ 298 (492)
.....|+.||+..|.+++.. ..+++++.++|+.+..+.... ...... .. ..
T Consensus 162 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~------------~~~~~~-~~---~~ 217 (256)
T PRK12748 162 --------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE------------ELKHHL-VP---KF 217 (256)
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh------------hHHHhh-hc---cC
Confidence 12357999999999987765 357999999998776543210 000000 00 00
Q ss_pred ecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 299 LGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 299 ~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+ ...+...+|+++++..++....... . +.++++.++
T Consensus 218 ~-----~~~~~~~~~~a~~~~~l~~~~~~~~-~-g~~~~~d~g 253 (256)
T PRK12748 218 P-----QGRVGEPVDAARLIAFLVSEEAKWI-T-GQVIHSEGG 253 (256)
T ss_pred C-----CCCCcCHHHHHHHHHHHhCcccccc-c-CCEEEecCC
Confidence 1 1124557999999887765322221 1 678888765
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.2e-14 Score=137.19 Aligned_cols=213 Identities=15% Similarity=0.146 Sum_probs=141.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||+++++.|++.|+ +|+++.|+..... ..++..
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~~~------------------------------~~~~~~ 49 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGA---QVYGVDKQDKPDL------------------------------SGNFHF 49 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCC---EEEEEeCCccccc------------------------------CCcEEE
Confidence 5689999999999999999999999996 4577777643210 145788
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc---ccceeEE
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTN----F----DERYDVALDLNTFGAKHVLNFSKKC---AKLIVLV 158 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~V 158 (492)
+.+|++++ .+........+|+|||+||... + .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 50 ~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 123 (235)
T PRK06550 50 LQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIII 123 (235)
T ss_pred EECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99999853 1222234468999999999532 1 1356778999999999999988642 1235799
Q ss_pred EeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHH
Q 037479 159 HVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238 (492)
Q Consensus 159 ~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~ 238 (492)
++||....... .....|+
T Consensus 124 ~~sS~~~~~~~--------------------------------------------------------------~~~~~Y~ 141 (235)
T PRK06550 124 NMCSIASFVAG--------------------------------------------------------------GGGAAYT 141 (235)
T ss_pred EEcChhhccCC--------------------------------------------------------------CCCcccH
Confidence 99986543211 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 239 FTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 239 ~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
.+|+..+.+.+.. ..++++++++|+.|.++.... .+.+ ..+...+... .....+...+|
T Consensus 142 ~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~--~~~~-----~~~~~~~~~~---------~~~~~~~~~~~ 205 (235)
T PRK06550 142 ASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA--DFEP-----GGLADWVARE---------TPIKRWAEPEE 205 (235)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccc--ccCc-----hHHHHHHhcc---------CCcCCCCCHHH
Confidence 9999877776654 358999999999997765421 1111 0111111110 01223567899
Q ss_pred hhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 314 VVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 314 va~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|++++.++........ +.++.+.++
T Consensus 206 ~a~~~~~l~s~~~~~~~--g~~~~~~gg 231 (235)
T PRK06550 206 VAELTLFLASGKADYMQ--GTIVPIDGG 231 (235)
T ss_pred HHHHHHHHcChhhccCC--CcEEEECCc
Confidence 99999998864332221 677777665
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.3e-14 Score=134.05 Aligned_cols=193 Identities=19% Similarity=0.122 Sum_probs=130.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++++||||||+||++++++|++.|. +|.++.|+.... +.+. ..+....+ ..++.++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~---~v~~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~~~ 59 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR---DLALCARRTDRL---EELK---------AELLARYP-------GIKVAVAA 59 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHHHH---HHHH---------HHHHhhCC-------CceEEEEE
Confidence 67999999999999999999999985 567888864321 1111 11111111 24688999
Q ss_pred cCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---ccc
Q 037479 92 GDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKC---AKL 154 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~ 154 (492)
+|+++ .+....+ ..++|+|||+||..... +.+...+++|+.|+.++++.+... .+.
T Consensus 60 ~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 132 (248)
T PRK08251 60 LDVND-------HDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGS 132 (248)
T ss_pred cCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 99995 3333232 24699999999965331 345677899999999988877432 145
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.+||++||........ ++.
T Consensus 133 ~~iv~~sS~~~~~~~~-------------------------------------------------------------~~~ 151 (248)
T PRK08251 133 GHLVLISSVSAVRGLP-------------------------------------------------------------GVK 151 (248)
T ss_pred CeEEEEeccccccCCC-------------------------------------------------------------CCc
Confidence 6899999854322110 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+...+ ..++++++++|+.|.++..... . . ....+
T Consensus 152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-----------------~---------~---~~~~~ 202 (248)
T PRK08251 152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-----------------K---------S---TPFMV 202 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-----------------c---------c---CCccC
Confidence 57999999988877654 3479999999999876533110 0 0 11357
Q ss_pred ehhhhhhHHHHHHH
Q 037479 310 PADMVVNAIVVAVV 323 (492)
Q Consensus 310 ~vddva~~ii~~~~ 323 (492)
+.+++|++++.++.
T Consensus 203 ~~~~~a~~i~~~~~ 216 (248)
T PRK08251 203 DTETGVKALVKAIE 216 (248)
T ss_pred CHHHHHHHHHHHHh
Confidence 78999999998886
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.5e-14 Score=135.12 Aligned_cols=223 Identities=13% Similarity=0.110 Sum_probs=141.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... ..+.+.++ ++.. ..++..
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~---~v~~~~r~~~~--~~~~~~~~---------l~~~---------~~~~~~ 62 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGA---DVALFDLRTDD--GLAETAEH---------IEAA---------GRRAIQ 62 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCcch--HHHHHHHH---------HHhc---------CCceEE
Confidence 5789999999999999999999999996 45788886432 11111111 1110 246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ ++..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+... .
T Consensus 63 ~~~D~~~-------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (254)
T PRK06114 63 IAADVTS-------KADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN 135 (254)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 9999995 33333333 357999999997542 2456788999999998887776432 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||........+ .
T Consensus 136 ~~~~iv~isS~~~~~~~~~------------------------------------------------------------~ 155 (254)
T PRK06114 136 GGGSIVNIASMSGIIVNRG------------------------------------------------------------L 155 (254)
T ss_pred CCcEEEEECchhhcCCCCC------------------------------------------------------------C
Confidence 3458999998543321100 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+++.. ..++++.+++|+.|.++.... +.. ......+.. ..+ ..-
T Consensus 156 ~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~-~~~-------~~~~~~~~~----~~p-----~~r 218 (254)
T PRK06114 156 LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR-PEM-------VHQTKLFEE----QTP-----MQR 218 (254)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc-ccc-------hHHHHHHHh----cCC-----CCC
Confidence 2357999999888877655 458999999999987765321 110 011111110 001 112
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|++++++.++......- . |.++.+.++
T Consensus 219 ~~~~~dva~~~~~l~s~~~~~~-t-G~~i~~dgg 250 (254)
T PRK06114 219 MAKVDEMVGPAVFLLSDAASFC-T-GVDLLVDGG 250 (254)
T ss_pred CcCHHHHHHHHHHHcCccccCc-C-CceEEECcC
Confidence 4568999999998876432222 1 677777765
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.7e-14 Score=135.90 Aligned_cols=218 Identities=9% Similarity=0.050 Sum_probs=139.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++|+||||||+||.+++++|++.|++ |+++.|+... ..+++.+++ +. ...++..+.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~---V~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~~~~ 58 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD---IGITWHSDEE--GAKETAEEV---------RS---------HGVRAEIRQ 58 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCChH--HHHHHHHHH---------Hh---------cCCceEEEE
Confidence 579999999999999999999999964 4666554321 122222111 11 125688899
Q ss_pred cCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc----c
Q 037479 92 GDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA----K 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~----~ 153 (492)
+|++++ +..+.++ ..+|+|||+||.... .+.+...+++|+.|+..+++++.... +
T Consensus 59 ~Dl~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 131 (256)
T PRK12743 59 LDLSDL-------PEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ 131 (256)
T ss_pred ccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 999953 3332332 368999999997532 14567889999999999999876531 1
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||....... ..
T Consensus 132 ~g~ii~isS~~~~~~~--------------------------------------------------------------~~ 149 (256)
T PRK12743 132 GGRIINITSVHEHTPL--------------------------------------------------------------PG 149 (256)
T ss_pred CeEEEEEeeccccCCC--------------------------------------------------------------CC
Confidence 2479999985322110 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.+|+..+.+++.. ..+++++.++|+.+.++.....+. ........ ..+ ....
T Consensus 150 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~---------~~~~~~~~----~~~-----~~~~ 211 (256)
T PRK12743 150 ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS---------DVKPDSRP----GIP-----LGRP 211 (256)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh---------HHHHHHHh----cCC-----CCCC
Confidence 458999999999887755 347999999999998764321110 00000000 000 1123
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+.+|+++++..++........ +.++.+.++
T Consensus 212 ~~~~dva~~~~~l~~~~~~~~~--G~~~~~dgg 242 (256)
T PRK12743 212 GDTHEIASLVAWLCSEGASYTT--GQSLIVDGG 242 (256)
T ss_pred CCHHHHHHHHHHHhCccccCcC--CcEEEECCC
Confidence 4779999999888753322221 677777765
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.8e-14 Score=135.72 Aligned_cols=221 Identities=12% Similarity=0.089 Sum_probs=143.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||+.+++.|++.|. +|+++.|+... .+.+.. .+++ ...++..
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~---~v~~~~r~~~~---~~~~~~---------~~~~---------~~~~~~~ 64 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGA---HVLVNGRNAAT---LEAAVA---------ALRA---------AGGAAEA 64 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC---eEEEEeCCHHH---HHHHHH---------HHHh---------cCCceEE
Confidence 5789999999999999999999999996 56888886421 111111 1111 0245789
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+....++ ..+|+|||+|+.... .+.++..+++|+.|+..+.+.+.+. .
T Consensus 65 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 137 (256)
T PRK06124 65 LAFDIAD-------EEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ 137 (256)
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 33333333 357999999997532 1456778999999999999777541 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||....... .
T Consensus 138 ~~~~iv~~ss~~~~~~~--------------------------------------------------------------~ 155 (256)
T PRK06124 138 GYGRIIAITSIAGQVAR--------------------------------------------------------------A 155 (256)
T ss_pred CCcEEEEEeechhccCC--------------------------------------------------------------C
Confidence 45689999986433211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..+.+++.. ..++++..++|+.|.++..... .. ...+...+.. . . ....
T Consensus 156 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~---~~----~~~~~~~~~~-~---~-----~~~~ 219 (256)
T PRK06124 156 GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAM---AA----DPAVGPWLAQ-R---T-----PLGR 219 (256)
T ss_pred CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhh---cc----ChHHHHHHHh-c---C-----CCCC
Confidence 2357999999988887654 3489999999999988753211 00 0111111111 0 0 1124
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|++.+++.++....... . |..+.+.++
T Consensus 220 ~~~~~~~a~~~~~l~~~~~~~~-~-G~~i~~dgg 251 (256)
T PRK06124 220 WGRPEEIAGAAVFLASPAASYV-N-GHVLAVDGG 251 (256)
T ss_pred CCCHHHHHHHHHHHcCcccCCc-C-CCEEEECCC
Confidence 7889999999999887433211 1 566666554
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.5e-14 Score=136.73 Aligned_cols=220 Identities=13% Similarity=0.116 Sum_probs=142.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||.+++++|++.|+ +|+++.|+... .+.+.+ .++.. ..++..
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~l~~~---------~~~~~~ 62 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGA---QVAIAARHLDA---LEKLAD---------EIGTS---------GGKVVP 62 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHHH---------HHHhc---------CCeEEE
Confidence 5789999999999999999999999996 45777775422 222211 11111 246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+..+.++ .++|++||+||..... +.++..+++|+.|+..+++++....
T Consensus 63 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (253)
T PRK05867 63 VCCDVSQ-------HQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ 135 (253)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhc
Confidence 9999994 33333333 4799999999975421 4567788999999999999875421
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ -.++|++||........ +
T Consensus 136 ~~~g~iv~~sS~~~~~~~~--------~---------------------------------------------------- 155 (253)
T PRK05867 136 GQGGVIINTASMSGHIINV--------P---------------------------------------------------- 155 (253)
T ss_pred CCCcEEEEECcHHhcCCCC--------C----------------------------------------------------
Confidence 1 23688888754221000 0
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..|+++..++|+.|-.+.....+ .....+... .+ ..
T Consensus 156 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~----------~~~~~~~~~----~~-----~~ 216 (253)
T PRK05867 156 QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT----------EYQPLWEPK----IP-----LG 216 (253)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch----------HHHHHHHhc----CC-----CC
Confidence 11257999999999988765 35899999999998765432211 111111100 01 11
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+...+|+|++++.++......- . +.++.+.++
T Consensus 217 r~~~p~~va~~~~~L~s~~~~~~-t-G~~i~vdgG 249 (253)
T PRK05867 217 RLGRPEELAGLYLYLASEASSYM-T-GSDIVIDGG 249 (253)
T ss_pred CCcCHHHHHHHHHHHcCcccCCc-C-CCeEEECCC
Confidence 35678999999998886432221 1 677777765
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.2e-14 Score=134.78 Aligned_cols=227 Identities=14% Similarity=0.099 Sum_probs=138.7
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+++||||+|+||.++++.|++.|+ +|+++.|+... .+++..++ .. ...++.++.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~---~v~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~~~ 57 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF---KVAIVDYNEET---AQAAADKL---------SK---------DGGKAIAVK 57 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hh---------cCCeEEEEE
Confidence 68999999999999999999999996 45888886432 22221111 00 024678899
Q ss_pred cCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----cc
Q 037479 92 GDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC----AK 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~ 153 (492)
+|++++ +....++ .++|+|||+||.... .+.++..+++|+.|+..+++.+... +.
T Consensus 58 ~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 130 (256)
T PRK08643 58 ADVSDR-------DQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH 130 (256)
T ss_pred CCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 999953 3332333 368999999986432 1346778999999998887776542 11
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||....... ..
T Consensus 131 ~~~iv~~sS~~~~~~~--------------------------------------------------------------~~ 148 (256)
T PRK08643 131 GGKIINATSQAGVVGN--------------------------------------------------------------PE 148 (256)
T ss_pred CCEEEEECccccccCC--------------------------------------------------------------CC
Confidence 2478999885422110 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCc-cccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPG-WAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~g-w~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
...|+.||+..|.+.+.+ ..|++++.++|+.|.++....... .-................ .. ....
T Consensus 149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~ 220 (256)
T PRK08643 149 LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAK---DI-----TLGR 220 (256)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhc---cC-----CCCC
Confidence 357999999888777654 358999999999987754211000 000000000000000000 00 0113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+++|+++..++........ +.++.+.++
T Consensus 221 ~~~~~~va~~~~~L~~~~~~~~~--G~~i~vdgg 252 (256)
T PRK08643 221 LSEPEDVANCVSFLAGPDSDYIT--GQTIIVDGG 252 (256)
T ss_pred CcCHHHHHHHHHHHhCccccCcc--CcEEEeCCC
Confidence 56789999999888864332221 677777665
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.7e-14 Score=134.60 Aligned_cols=216 Identities=15% Similarity=0.144 Sum_probs=141.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++||||+|+||..+++.|++.|. +|+++.|+.... +...+++ +. ...++..
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~---~vi~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 58 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGA---KLALIDLNQEKL---EEAVAEC---------GA---------LGTEVRG 58 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHHH---------Hh---------cCCceEE
Confidence 4689999999999999999999999986 557777764221 1111011 11 0246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc----------------chhHHHHHHHhHHHHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF----------------DERYDVALDLNTFGAKHVLN 146 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~----------------~~~~~~~~~~Nv~gt~~ll~ 146 (492)
+.+|++++ +..+.++ ..+|+|||+||.... .+.+...+++|+.|+..+++
T Consensus 59 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 131 (253)
T PRK08217 59 YAANVTDE-------EDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGR 131 (253)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence 99999843 3332222 358999999985321 13456778899999988776
Q ss_pred HHHhc----ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhh
Q 037479 147 FSKKC----AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKD 222 (492)
Q Consensus 147 ~a~~~----~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (492)
.+... ..-..+|++||...++..
T Consensus 132 ~~~~~l~~~~~~~~iv~~ss~~~~~~~----------------------------------------------------- 158 (253)
T PRK08217 132 EAAAKMIESGSKGVIINISSIARAGNM----------------------------------------------------- 158 (253)
T ss_pred HHHHHHHhcCCCeEEEEEccccccCCC-----------------------------------------------------
Confidence 54431 122468999986554321
Q ss_pred hhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeE
Q 037479 223 LGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTC 297 (492)
Q Consensus 223 ~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~ 297 (492)
....|+.||+..|.+++.+ ..+++++.++|+.|.++...... ......+..+.
T Consensus 159 ----------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~--- 216 (253)
T PRK08217 159 ----------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK---------PEALERLEKMI--- 216 (253)
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---------HHHHHHHHhcC---
Confidence 2357999999999987765 35899999999999876543211 11111111111
Q ss_pred EecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 298 FLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 298 ~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+.+++|+|+++..++... ... +++|+++++
T Consensus 217 ------~~~~~~~~~~~a~~~~~l~~~~-~~~---g~~~~~~gg 250 (253)
T PRK08217 217 ------PVGRLGEPEEIAHTVRFIIEND-YVT---GRVLEIDGG 250 (253)
T ss_pred ------CcCCCcCHHHHHHHHHHHHcCC-CcC---CcEEEeCCC
Confidence 1124568899999999888532 112 789999886
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.9e-14 Score=134.25 Aligned_cols=222 Identities=14% Similarity=0.089 Sum_probs=141.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|.||.++++.|++.|+ +|+++.|+... .+.+.+ .++.. ..++.+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~---~v~~~~r~~~~---~~~~~~---------~~~~~---------~~~~~~ 59 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGA---KVVVGARRQAE---LDQLVA---------EIRAE---------GGEAVA 59 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH---------HHHhc---------CCcEEE
Confidence 4689999999999999999999999996 56888887432 111111 11111 245788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+.+|+++ .+..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 60 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~ 132 (254)
T PRK07478 60 LAGDVRD-------EAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLA 132 (254)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 9999994 33333333 368999999997431 1346788999999888776654431
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||...+....
T Consensus 133 ~~~~~iv~~sS~~~~~~~~------------------------------------------------------------- 151 (254)
T PRK07478 133 RGGGSLIFTSTFVGHTAGF------------------------------------------------------------- 151 (254)
T ss_pred cCCceEEEEechHhhccCC-------------------------------------------------------------
Confidence 1345799999964432110
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..++.+.+++|+.|-.+...... .. ......+.. . ....
T Consensus 152 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~-~~~~~~~~~----~--------~~~~ 215 (254)
T PRK07478 152 PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMG---DT-PEALAFVAG----L--------HALK 215 (254)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccccc---CC-HHHHHHHHh----c--------CCCC
Confidence 12357999999999888765 34799999999998665321110 00 000011100 0 0111
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+...+|++++++.++........ |.++.+.++
T Consensus 216 ~~~~~~~va~~~~~l~s~~~~~~~--G~~~~~dgg 248 (254)
T PRK07478 216 RMAQPEEIAQAALFLASDAASFVT--GTALLVDGG 248 (254)
T ss_pred CCcCHHHHHHHHHHHcCchhcCCC--CCeEEeCCc
Confidence 356789999999988764332221 667777654
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.4e-14 Score=136.41 Aligned_cols=227 Identities=17% Similarity=0.125 Sum_probs=142.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||.+++++|++.|+ +|+++.|+... .+.+.+++ +... ...++.+
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~---~vv~~~r~~~~---~~~~~~~~---------~~~~-------~~~~~~~ 62 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGA---AVALADLDAAL---AERAAAAI---------ARDV-------AGARVLA 62 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hhcc-------CCceEEE
Confidence 5789999999999999999999999996 45788885432 12111111 1100 0246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ ++....++ ..+|++||+||.... .+.++..+++|+.|+..+++.+... .
T Consensus 63 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (260)
T PRK07063 63 VPADVTD-------AASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER 135 (260)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Confidence 9999995 33333333 369999999996432 2457788999999999998887542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 136 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 153 (260)
T PRK07063 136 GRGSIVNIASTHAFKII--------------------------------------------------------------P 153 (260)
T ss_pred CCeEEEEECChhhccCC--------------------------------------------------------------C
Confidence 34689999996433211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++..++|+.|-.+..... | .............. .. .+ ..-
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~--~-~~~~~~~~~~~~~~-~~---~~-----~~r 221 (260)
T PRK07063 154 GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW--W-NAQPDPAAARAETL-AL---QP-----MKR 221 (260)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh--h-hccCChHHHHHHHH-hc---CC-----CCC
Confidence 2347999999999888765 3589999999998866543210 0 00000000110000 00 00 112
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++......- . +.+..+.++
T Consensus 222 ~~~~~~va~~~~fl~s~~~~~i-t-G~~i~vdgg 253 (260)
T PRK07063 222 IGRPEEVAMTAVFLASDEAPFI-N-ATCITIDGG 253 (260)
T ss_pred CCCHHHHHHHHHHHcCcccccc-C-CcEEEECCC
Confidence 4567999999998876432221 1 667777665
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-14 Score=136.60 Aligned_cols=218 Identities=11% Similarity=0.119 Sum_probs=135.8
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++++|+||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ -+..
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~---~v~~~~r~~~~---~~~~~-------------~~----------~~~~ 54 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGA---TVVVGDIDPEA---GKAAA-------------DE----------VGGL 54 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHH-------------HH----------cCCc
Confidence 36899999999999999999999999996 45777775422 11111 00 1125
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCcc---------hhHHHHHHHhHHHHHHHHHHHHh-c
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNFD---------ERYDVALDLNTFGAKHVLNFSKK-C 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~~---------~~~~~~~~~Nv~gt~~ll~~a~~-~ 151 (492)
++.+|+++ ++..+.+++ ++|+|||+||..... +.++..+++|+.|+..+++.+.. +
T Consensus 55 ~~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 127 (255)
T PRK06057 55 FVPTDVTD-------EDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHM 127 (255)
T ss_pred EEEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 67899994 443334443 589999999875321 34678899999999888776643 1
Q ss_pred --ccceeEEEeeece-eecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 152 --AKLIVLVHVSTAF-VWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 152 --~~~~~~V~vST~~-v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
.+..++|++||.. +++..
T Consensus 128 ~~~~~g~iv~~sS~~~~~g~~----------------------------------------------------------- 148 (255)
T PRK06057 128 VRQGKGSIINTASFVAVMGSA----------------------------------------------------------- 148 (255)
T ss_pred HHhCCcEEEEEcchhhccCCC-----------------------------------------------------------
Confidence 1345788888843 33221
Q ss_pred ccCCCCchHHHHHHHHHHHHH----Hh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIE----HL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~----~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+ ++ ..+++++++||+.|.++..... +. .......... ...+
T Consensus 149 ---~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~--~~---~~~~~~~~~~-----~~~~---- 211 (255)
T PRK06057 149 ---TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL--FA---KDPERAARRL-----VHVP---- 211 (255)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh--cc---CCHHHHHHHH-----hcCC----
Confidence 123469999976555544 44 4589999999999987654221 10 0111110000 0111
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+..++++++++...+........ +..+.+.++
T Consensus 212 -~~~~~~~~~~a~~~~~l~~~~~~~~~--g~~~~~~~g 246 (255)
T PRK06057 212 -MGRFAEPEEIAAAVAFLASDDASFIT--ASTFLVDGG 246 (255)
T ss_pred -CCCCcCHHHHHHHHHHHhCccccCcc--CcEEEECCC
Confidence 11468899999998877754322221 566766654
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.8e-14 Score=138.42 Aligned_cols=220 Identities=16% Similarity=0.155 Sum_probs=141.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ ...++.+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 56 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGA---RVAIVDIDADN---GAAVA-------------AS--------LGERARF 56 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------hCCeeEE
Confidence 4689999999999999999999999996 55888886432 11111 11 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhc--ccc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF------DERYDVALDLNTFGAKHVLNFSKKC--AKL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~ 154 (492)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+++.+... .+-
T Consensus 57 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (261)
T PRK08265 57 IATDITD-------DAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGG 129 (261)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCC
Confidence 9999994 43333333 368999999996421 2456788999999999999877642 123
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... ...
T Consensus 130 g~ii~isS~~~~~~~--------------------------------------------------------------~~~ 147 (261)
T PRK08265 130 GAIVNFTSISAKFAQ--------------------------------------------------------------TGR 147 (261)
T ss_pred cEEEEECchhhccCC--------------------------------------------------------------CCC
Confidence 579999985432111 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.+|+..+.+.+.. ..++++.+++|+.+..+....... . .......+... ......+.
T Consensus 148 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~---~---~~~~~~~~~~~--------~~p~~r~~ 213 (261)
T PRK08265 148 WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSG---G---DRAKADRVAAP--------FHLLGRVG 213 (261)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcc---c---chhHHHHhhcc--------cCCCCCcc
Confidence 47999999988888754 358999999999876553211100 0 00000000000 00111245
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+|+|+++..++........ +.++.+.++
T Consensus 214 ~p~dva~~~~~l~s~~~~~~t--G~~i~vdgg 243 (261)
T PRK08265 214 DPEEVAQVVAFLCSDAASFVT--GADYAVDGG 243 (261)
T ss_pred CHHHHHHHHHHHcCccccCcc--CcEEEECCC
Confidence 689999999988864322221 677887776
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.7e-14 Score=138.13 Aligned_cols=162 Identities=19% Similarity=0.120 Sum_probs=113.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++||||||||+||+++++.|++.|+ +|++++|+... .+.+.+ .. .. ...++.++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~---~v~~~~r~~~~---~~~~~~---------~~-~~--------~~~~~~~~~ 57 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH---NVIAGVQIAPQ---VTALRA---------EA-AR--------RGLALRVEK 57 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH---------HH-Hh--------cCCcceEEE
Confidence 57999999999999999999999996 55888886422 111110 00 00 124578899
Q ss_pred cCCCCCCCCCCchhhHHHhcc-CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcccceeEEE
Q 037479 92 GDITREDLGVKDSNLREEMWN-KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKCAKLIVLVH 159 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~-~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~V~ 159 (492)
+|+++ .+....++. ++|+|||+|+.... .+.++..+++|+.|+.++.+.+ ++. +.++||+
T Consensus 58 ~D~~~-------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~ 129 (257)
T PRK09291 58 LDLTD-------AIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVF 129 (257)
T ss_pred eeCCC-------HHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEE
Confidence 99994 444445555 89999999996532 1346678899999987776644 333 4578999
Q ss_pred eeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 160 VSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 160 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
+||....... .....|+.
T Consensus 130 ~SS~~~~~~~--------------------------------------------------------------~~~~~Y~~ 147 (257)
T PRK09291 130 TSSMAGLITG--------------------------------------------------------------PFTGAYCA 147 (257)
T ss_pred EcChhhccCC--------------------------------------------------------------CCcchhHH
Confidence 9986432110 12457999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeCCceec
Q 037479 240 TKVMGEMFIEHL-----KENMSVAIVRPTIITG 267 (492)
Q Consensus 240 sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g 267 (492)
||+..|++.+.+ ..+++++++||+.+..
T Consensus 148 sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 148 SKHALEAIAEAMHAELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence 999999887654 3589999999987643
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.4e-14 Score=136.37 Aligned_cols=227 Identities=15% Similarity=0.139 Sum_probs=146.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||+.++++|++.|.+ .|+++.|+.... +... +.++. ...++..
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~--~V~~~~r~~~~~---~~~~---------~~l~~---------~~~~~~~ 60 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAA--GLVICGRNAEKG---EAQA---------AELEA---------LGAKAVF 60 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCC--eEEEEcCCHHHH---HHHH---------HHHHh---------cCCeEEE
Confidence 57899999999999999999999999864 368888863321 1111 11111 1246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+....++ .++|+|||+||.... .+.+...+++|+.|+.++++.+.+..
T Consensus 61 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 133 (260)
T PRK06198 61 VQADLSD-------VEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRR 133 (260)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999994 33333333 368999999996431 13456789999999999988875431
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
...++|++||...++..
T Consensus 134 ~~~g~iv~~ss~~~~~~~-------------------------------------------------------------- 151 (260)
T PRK06198 134 KAEGTIVNIGSMSAHGGQ-------------------------------------------------------------- 151 (260)
T ss_pred CCCCEEEEECCcccccCC--------------------------------------------------------------
Confidence 12479999987655432
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
...+.|+.+|...|.+.+.+ ..+++++.++|+.+.++.......-.. .....++..... .....
T Consensus 152 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~ 220 (260)
T PRK06198 152 PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFH--GAPDDWLEKAAA---------TQPFG 220 (260)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhcc--CCChHHHHHHhc---------cCCcc
Confidence 12367999999999888754 357999999999998875311000000 011111111110 11122
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+++++..++....... . ++++.+.++
T Consensus 221 ~~~~~~~~a~~~~~l~~~~~~~~-~-G~~~~~~~~ 253 (260)
T PRK06198 221 RLLDPDEVARAVAFLLSDESGLM-T-GSVIDFDQS 253 (260)
T ss_pred CCcCHHHHHHHHHHHcChhhCCc-c-CceEeECCc
Confidence 46789999999998876432211 2 788888776
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.9e-14 Score=140.91 Aligned_cols=201 Identities=17% Similarity=0.251 Sum_probs=132.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||||+||+.++++|++.|+ +|+++.|+... .+.+.++ +++ ...++..
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~---~Vvl~~R~~~~---l~~~~~~---------l~~---------~g~~~~~ 61 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGA---KVVLLARGEEG---LEALAAE---------IRA---------AGGEALA 61 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHH---------cCCcEEE
Confidence 5689999999999999999999999996 45888886422 1111111 111 1246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+..+.++ ..+|++||+|+...+. +.++..+++|+.|+.++.+.+.+..
T Consensus 62 v~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~ 134 (334)
T PRK07109 62 VVADVAD-------AEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR 134 (334)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999994 44343332 3699999999965321 4467788999888777655543321
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||...+... .
T Consensus 135 ~~g~iV~isS~~~~~~~--------------------------------------------------------------~ 152 (334)
T PRK07109 135 DRGAIIQVGSALAYRSI--------------------------------------------------------------P 152 (334)
T ss_pred CCcEEEEeCChhhccCC--------------------------------------------------------------C
Confidence 34689999997665321 1
Q ss_pred CCchHHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
....|+.||+..+.+.+.. ..++.+++++|+.|-.+.. .|..+ .. +. .....
T Consensus 153 ~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~----~~~~~----------~~-~~------~~~~~ 211 (334)
T PRK07109 153 LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF----DWARS----------RL-PV------EPQPV 211 (334)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh----hhhhh----------hc-cc------cccCC
Confidence 2357999999887776543 2469999999998865432 11110 00 00 01112
Q ss_pred cceeehhhhhhHHHHHHHh
Q 037479 306 VDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~ 324 (492)
..++..+|+|++++.++.+
T Consensus 212 ~~~~~pe~vA~~i~~~~~~ 230 (334)
T PRK07109 212 PPIYQPEVVADAILYAAEH 230 (334)
T ss_pred CCCCCHHHHHHHHHHHHhC
Confidence 2457899999999999874
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.5e-14 Score=134.35 Aligned_cols=214 Identities=18% Similarity=0.161 Sum_probs=137.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++||||||+|+||+++++.|++.|+ +|+++.|+... .+.+..++ .. ..++..
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~----------~~~~~~ 57 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGA---QVCINSRNENK---LKRMKKTL---------SK----------YGNIHY 57 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hh----------cCCeEE
Confidence 3578999999999999999999999996 55888886432 11111000 00 135788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-----hhHHHHHHHhHHHHHHHHHHHHhcc-ccee
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-----ERYDVALDLNTFGAKHVLNFSKKCA-KLIV 156 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~ 156 (492)
+.+|++++ +..+.++ ..+|.+||+|+..... +.++..+++|+.++..+++.+.++. .-.+
T Consensus 58 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 130 (238)
T PRK05786 58 VVGDVSST-------ESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSS 130 (238)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCE
Confidence 99999953 3332332 3579999999854221 3456778999999988888776531 2246
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
||++||....... . .....
T Consensus 131 iv~~ss~~~~~~~--------~-----------------------------------------------------~~~~~ 149 (238)
T PRK05786 131 IVLVSSMSGIYKA--------S-----------------------------------------------------PDQLS 149 (238)
T ss_pred EEEEecchhcccC--------C-----------------------------------------------------CCchH
Confidence 8888885331100 0 12356
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
|+.||+..+.+++.+ ..+++++++||+.|+++.. +-..| .. .. ......++.
T Consensus 150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~-~~~~~-----------~~-----~~------~~~~~~~~~ 206 (238)
T PRK05786 150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE-PERNW-----------KK-----LR------KLGDDMAPP 206 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC-chhhh-----------hh-----hc------cccCCCCCH
Confidence 999999888777654 3589999999999998643 10000 00 00 001135788
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|++++++.++........ +..+.+.++
T Consensus 207 ~~va~~~~~~~~~~~~~~~--g~~~~~~~~ 234 (238)
T PRK05786 207 EDFAKVIIWLLTDEADWVD--GVVIPVDGG 234 (238)
T ss_pred HHHHHHHHHHhcccccCcc--CCEEEECCc
Confidence 9999999998864222111 666666544
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.2e-14 Score=137.62 Aligned_cols=226 Identities=14% Similarity=0.131 Sum_probs=141.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||||+||+++++.|++.|+ +|+++.|+ .. .+.+..+ +++. ..++.+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~---~vi~~~r~-~~---~~~~~~~---------~~~~---------~~~~~~ 58 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGA---YVLAVDIA-EA---VSETVDK---------IKSN---------GGKAKA 58 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCc-HH---HHHHHHH---------HHhc---------CCeEEE
Confidence 5789999999999999999999999996 55788776 21 1111111 1110 246888
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+....
T Consensus 59 ~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (272)
T PRK08589 59 YHVDISDE-------QQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMME 131 (272)
T ss_pred EEeecCCH-------HHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999953 3332332 358999999997531 13467788999999988877765421
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||...+... .
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 149 (272)
T PRK08589 132 QGGSIINTSSFSGQAAD--------------------------------------------------------------L 149 (272)
T ss_pred cCCEEEEeCchhhcCCC--------------------------------------------------------------C
Confidence 11589999986433211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+++.+ ..++++..+.|+.|..+......+.... .....+...... . ....-
T Consensus 150 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~---~-----~~~~~ 219 (272)
T PRK08589 150 YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSED--EAGKTFRENQKW---M-----TPLGR 219 (272)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchh--hHHHHHhhhhhc---c-----CCCCC
Confidence 2357999999999988765 4589999999999876543211110000 000000000000 0 00112
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|++++++.++........ +.++.+.++
T Consensus 220 ~~~~~~va~~~~~l~s~~~~~~~--G~~i~vdgg 251 (272)
T PRK08589 220 LGKPEEVAKLVVFLASDDSSFIT--GETIRIDGG 251 (272)
T ss_pred CcCHHHHHHHHHHHcCchhcCcC--CCEEEECCC
Confidence 46789999999888764332221 677877766
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.1e-14 Score=138.09 Aligned_cols=226 Identities=17% Similarity=0.172 Sum_probs=142.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... .+.+.+++ .. ...++.+
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 63 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGA---KVAILDRNQEK---AEAVVAEI---------KA---------AGGEALA 63 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hh---------cCCeEEE
Confidence 5789999999999999999999999996 45788886321 11111111 10 0246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc----------------------chhHHHHHHHhHHH
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF----------------------DERYDVALDLNTFG 140 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~----------------------~~~~~~~~~~Nv~g 140 (492)
+.+|+++ .+....++ .++|+|||+||.... .+.+...+++|+.+
T Consensus 64 ~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 136 (278)
T PRK08277 64 VKADVLD-------KESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLG 136 (278)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHH
Confidence 9999995 33332332 478999999995321 13467789999999
Q ss_pred HHHHHHHHHhc---ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHH
Q 037479 141 AKHVLNFSKKC---AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAIT 217 (492)
Q Consensus 141 t~~ll~~a~~~---~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (492)
+..+++.+.+. .+..++|++||...+...
T Consensus 137 ~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------------------------------------------ 168 (278)
T PRK08277 137 TLLPTQVFAKDMVGRKGGNIINISSMNAFTPL------------------------------------------------ 168 (278)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEccchhcCCC------------------------------------------------
Confidence 98776655432 134589999987554321
Q ss_pred HHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccC
Q 037479 218 LAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGK 292 (492)
Q Consensus 218 ~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~ 292 (492)
.....|+.||+..+.+++.+ ..++++.+++|+.|.++..+.....-+. ........+..
T Consensus 169 --------------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~ 232 (278)
T PRK08277 169 --------------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDG--SLTERANKILA 232 (278)
T ss_pred --------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccc--cchhHHHHHhc
Confidence 12357999999999888755 3589999999999988754221100000 00001111100
Q ss_pred ceeeEEecCCCcccceeehhhhhhHHHHHHHh-hhcCCCCCCcEEEecCC
Q 037479 293 GRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA-HAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 293 g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~-~~~~~~~~~~iy~i~~~ 341 (492)
.....-+...+|+|++++.++.. ..... . +.+..+.++
T Consensus 233 ---------~~p~~r~~~~~dva~~~~~l~s~~~~~~~-t-G~~i~vdgG 271 (278)
T PRK08277 233 ---------HTPMGRFGKPEELLGTLLWLADEKASSFV-T-GVVLPVDGG 271 (278)
T ss_pred ---------cCCccCCCCHHHHHHHHHHHcCccccCCc-C-CCEEEECCC
Confidence 01112356789999999988764 22222 1 667777665
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6e-14 Score=134.00 Aligned_cols=221 Identities=14% Similarity=0.154 Sum_probs=141.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||+|+||++++++|++.|+ +|+++.|+... .+.+.+++ .+. ...+..
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~---~Vi~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 61 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGA---HVIVSSRKLDG---CQAVADAI---------VAA---------GGKAEA 61 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hhc---------CCeEEE
Confidence 5679999999999999999999999996 56888885422 22222111 110 135678
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.+.
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (252)
T PRK07035 62 LACHIGE-------MEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKE 134 (252)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 8999995 33332332 368999999985421 1345678999999999888776432
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||.......
T Consensus 135 ~~~~~iv~~sS~~~~~~~-------------------------------------------------------------- 152 (252)
T PRK07035 135 QGGGSIVNVASVNGVSPG-------------------------------------------------------------- 152 (252)
T ss_pred CCCcEEEEECchhhcCCC--------------------------------------------------------------
Confidence 134689999985432211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+++.+ ..++++..+.|+.|..+..... ... ......... .. + ..
T Consensus 153 ~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~---~~~----~~~~~~~~~-~~---~-----~~ 216 (252)
T PRK07035 153 DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASAL---FKN----DAILKQALA-HI---P-----LR 216 (252)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccc---cCC----HHHHHHHHc-cC---C-----CC
Confidence 23457999999999998866 3589999999998865543211 111 111111111 00 0 11
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+...+++|++++..+....... . +.++.+.++
T Consensus 217 ~~~~~~~va~~~~~l~~~~~~~~-~-g~~~~~dgg 249 (252)
T PRK07035 217 RHAEPSEMAGAVLYLASDASSYT-T-GECLNVDGG 249 (252)
T ss_pred CcCCHHHHHHHHHHHhCccccCc-c-CCEEEeCCC
Confidence 35567899999999886433222 1 677777654
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.8e-14 Score=142.80 Aligned_cols=126 Identities=15% Similarity=0.114 Sum_probs=87.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+|+|+||||||+||.++++.|++.|+ +|+++.|+... .+.+..++ .. ...++.++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~~~---~~~~~~~l---------~~---------~~~~~~~~ 60 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW---HVIMACRNLKK---AEAAAQEL---------GI---------PPDSYTII 60 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHh---------hc---------cCCceEEE
Confidence 579999999999999999999999995 56888885321 11111011 00 02467889
Q ss_pred ecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 91 PGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++....
T Consensus 61 ~~Dl~~-------~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 133 (322)
T PRK07453 61 HIDLGD-------LDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKS 133 (322)
T ss_pred EecCCC-------HHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhC
Confidence 999994 443434433 49999999996421 14567889999999999988876421
Q ss_pred c--ceeEEEeeeceeec
Q 037479 153 K--LIVLVHVSTAFVWG 167 (492)
Q Consensus 153 ~--~~~~V~vST~~v~~ 167 (492)
+ ..++|++||...+.
T Consensus 134 ~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 134 PAPDPRLVILGTVTANP 150 (322)
T ss_pred CCCCceEEEEcccccCc
Confidence 1 24899999976553
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.7e-14 Score=134.32 Aligned_cols=219 Identities=11% Similarity=0.092 Sum_probs=140.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|.||++++++|++.|++| .++.|... ....+.+ +. ...++..
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~v---v~~~~~~~-~~~~~~~-------------~~---------~~~~~~~ 61 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDI---VGINIVEP-TETIEQV-------------TA---------LGRRFLS 61 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEE---EEecCcch-HHHHHHH-------------Hh---------cCCeEEE
Confidence 678999999999999999999999999744 55544321 1111111 10 1245788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++.+....
T Consensus 62 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (253)
T PRK08993 62 LTADLRK-------IDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ 134 (253)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 9999994 33333433 368999999997532 14678899999999999998875421
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ -.++|++||...+...
T Consensus 135 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 152 (253)
T PRK08993 135 GNGGKIINIASMLSFQGG-------------------------------------------------------------- 152 (253)
T ss_pred CCCeEEEEECchhhccCC--------------------------------------------------------------
Confidence 1 2479999997554321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.. ..++++..++|+.|-.+...... .. ......+.. ..+ ..
T Consensus 153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~---~~----~~~~~~~~~----~~p-----~~ 216 (253)
T PRK08993 153 IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLR---AD----EQRSAEILD----RIP-----AG 216 (253)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhc---cc----hHHHHHHHh----cCC-----CC
Confidence 12247999999988888755 35899999999999765432110 00 000001100 011 01
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+++|+.++.++....... . +.++.+.++
T Consensus 217 r~~~p~eva~~~~~l~s~~~~~~-~-G~~~~~dgg 249 (253)
T PRK08993 217 RWGLPSDLMGPVVFLASSASDYI-N-GYTIAVDGG 249 (253)
T ss_pred CCcCHHHHHHHHHHHhCccccCc-c-CcEEEECCC
Confidence 25667999999998886432221 1 666666554
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=9e-14 Score=134.42 Aligned_cols=222 Identities=17% Similarity=0.147 Sum_probs=158.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|||||||||+|++++++|++.|+ +|.+++|+....... ...+.++.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~---~v~~~~r~~~~~~~~----------------------------~~~v~~~~~ 49 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH---EVRAAVRNPEAAAAL----------------------------AGGVEVVLG 49 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC---EEEEEEeCHHHHHhh----------------------------cCCcEEEEe
Confidence 5899999999999999999999986 558999976542211 156889999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM 172 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~ 172 (492)
|+. +...+...+++++.++++.+... .+. ........+..+..+.+. . +.++++++|...+..
T Consensus 50 d~~-------~~~~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s~~~~~~----- 112 (275)
T COG0702 50 DLR-------DPKSLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG-A-GVKHGVSLSVLGADA----- 112 (275)
T ss_pred ccC-------CHhHHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc-C-CceEEEEeccCCCCC-----
Confidence 999 55666688899999999998765 333 223333444444444444 2 577888888654332
Q ss_pred eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHhc
Q 037479 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLK 252 (492)
Q Consensus 173 i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 252 (492)
..+..|..+|..+|+++.+
T Consensus 113 -----------------------------------------------------------~~~~~~~~~~~~~e~~l~~-- 131 (275)
T COG0702 113 -----------------------------------------------------------ASPSALARAKAAVEAALRS-- 131 (275)
T ss_pred -----------------------------------------------------------CCccHHHHHHHHHHHHHHh--
Confidence 1246799999999999998
Q ss_pred CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCC
Q 037479 253 ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDV 332 (492)
Q Consensus 253 ~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~ 332 (492)
.+++.+++||+.++...... . .......+..... .+......+.++|++.++..++.... ..
T Consensus 132 sg~~~t~lr~~~~~~~~~~~----------~--~~~~~~~~~~~~~--~~~~~~~~i~~~d~a~~~~~~l~~~~-~~--- 193 (275)
T COG0702 132 SGIPYTTLRRAAFYLGAGAA----------F--IEAAEAAGLPVIP--RGIGRLSPIAVDDVAEALAAALDAPA-TA--- 193 (275)
T ss_pred cCCCeEEEecCeeeeccchh----------H--HHHHHhhCCceec--CCCCceeeeEHHHHHHHHHHHhcCCc-cc---
Confidence 89999999977766544421 0 1122222222222 22226789999999999988886433 22
Q ss_pred CcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 333 NNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 333 ~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++|.++++ ...+..++.+.+....++..
T Consensus 194 ~~~~~l~g~--~~~~~~~~~~~l~~~~gr~~ 222 (275)
T COG0702 194 GRTYELAGP--EALTLAELASGLDYTIGRPV 222 (275)
T ss_pred CcEEEccCC--ceecHHHHHHHHHHHhCCcc
Confidence 789999998 78999999999999988754
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.2e-14 Score=133.51 Aligned_cols=223 Identities=16% Similarity=0.196 Sum_probs=143.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|.||+.++++|++.|+ +|+++.|+... .+.+.+ .++...+ ..++.+
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~---~v~~~~r~~~~---~~~~~~---------~l~~~~~-------~~~~~~ 64 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGA---DVLIVARDADA---LAQARD---------ELAEEFP-------EREVHG 64 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHH---------HHHhhCC-------CCeEEE
Confidence 5789999999999999999999999997 45888886422 111111 1111111 246888
Q ss_pred EecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++++ +..+.+ +.++|+|||+||.... .+.++..+.+|+.|+..+++++... .
T Consensus 65 ~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 137 (257)
T PRK09242 65 LAADVSDD-------EDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH 137 (257)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 99999953 322222 3468999999996422 2457788999999999998887531 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 138 ~~~~ii~~sS~~~~~~~--------------------------------------------------------------~ 155 (257)
T PRK09242 138 ASSAIVNIGSVSGLTHV--------------------------------------------------------------R 155 (257)
T ss_pred CCceEEEECccccCCCC--------------------------------------------------------------C
Confidence 34689999997554321 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||...+.+++.+ ..+++++.++|+.|.++.... +... ......+... . ...-
T Consensus 156 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~---~~~~----~~~~~~~~~~-~--------~~~~ 219 (257)
T PRK09242 156 SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG---PLSD----PDYYEQVIER-T--------PMRR 219 (257)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccc---ccCC----hHHHHHHHhc-C--------CCCC
Confidence 2457999999999888754 358999999999998765422 1111 1111111110 0 0112
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+++++..++....... . ++++.+.++
T Consensus 220 ~~~~~~va~~~~~l~~~~~~~~-~-g~~i~~~gg 251 (257)
T PRK09242 220 VGEPEEVAAAVAFLCMPAASYI-T-GQCIAVDGG 251 (257)
T ss_pred CcCHHHHHHHHHHHhCcccccc-c-CCEEEECCC
Confidence 3457899999988875322211 1 667777654
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-13 Score=131.90 Aligned_cols=201 Identities=18% Similarity=0.191 Sum_probs=132.2
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+.+++++|+||||+|+||.+++++|++.|+ +|+++.|+... .+++.. .+++. ...++
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~---~Vi~~~r~~~~---~~~~~~---------~l~~~--------~~~~~ 64 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA---TVILLGRTEEK---LEAVYD---------EIEAA--------GGPQP 64 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC---cEEEEeCCHHH---HHHHHH---------HHHhc--------CCCCc
Confidence 457899999999999999999999999986 55888886421 122211 11111 01456
Q ss_pred EEEecCCCCCCCCCCchh------hHHHhccCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--
Q 037479 88 TLVPGDITREDLGVKDSN------LREEMWNKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC-- 151 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~------~~~~~~~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (492)
.++.+|++..+ ..+ .......++|+|||+||.... .+.+...+++|+.|+.++++.+...
T Consensus 65 ~~~~~d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~ 140 (247)
T PRK08945 65 AIIPLDLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLL 140 (247)
T ss_pred eEEEecccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 77888886321 111 111223468999999986432 1456788999999999988877431
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..+||++||.......
T Consensus 141 ~~~~~~iv~~ss~~~~~~~------------------------------------------------------------- 159 (247)
T PRK08945 141 KSPAASLVFTSSSVGRQGR------------------------------------------------------------- 159 (247)
T ss_pred hCCCCEEEEEccHhhcCCC-------------------------------------------------------------
Confidence 156789999985432111
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCC-CCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEP-FPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p-~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..|.+++.+ ..++++++++|+.+-++.... .+. . +
T Consensus 160 -~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~----------------------~--~--- 211 (247)
T PRK08945 160 -ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG----------------------E--D--- 211 (247)
T ss_pred -CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc----------------------c--c---
Confidence 12357999999999988765 347899999999886653211 000 0 0
Q ss_pred ccceeehhhhhhHHHHHHHh
Q 037479 305 IVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~ 324 (492)
...+...+++++.+..++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~ 231 (247)
T PRK08945 212 PQKLKTPEDIMPLYLYLMGD 231 (247)
T ss_pred ccCCCCHHHHHHHHHHHhCc
Confidence 01356779999999987753
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.3e-14 Score=134.37 Aligned_cols=219 Identities=11% Similarity=0.101 Sum_probs=140.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|.||+.++++|++.|.+ |+++.|+.. +....++ .+ ...++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~---vv~~~~~~~-----~~~~~~~---------~~---------~~~~~~~ 59 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGAD---IVGVGVAEA-----PETQAQV---------EA---------LGRKFHF 59 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEecCchH-----HHHHHHH---------HH---------cCCeEEE
Confidence 57899999999999999999999999974 466666421 1111011 00 1256888
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+....
T Consensus 60 ~~~Dl~~-------~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 132 (251)
T PRK12481 60 ITADLIQ-------QKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ 132 (251)
T ss_pred EEeCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc
Confidence 9999995 43333443 368999999997532 24577889999999998888775421
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ -.++|++||...+...
T Consensus 133 ~~~g~ii~isS~~~~~~~-------------------------------------------------------------- 150 (251)
T PRK12481 133 GNGGKIINIASMLSFQGG-------------------------------------------------------------- 150 (251)
T ss_pred CCCCEEEEeCChhhcCCC--------------------------------------------------------------
Confidence 1 2489999996544321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+++.. ..|+++..++|+.|-.+...... . .......+.. ..+ ..
T Consensus 151 ~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~---~----~~~~~~~~~~----~~p-----~~ 214 (251)
T PRK12481 151 IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALR---A----DTARNEAILE----RIP-----AS 214 (251)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcc---c----ChHHHHHHHh----cCC-----CC
Confidence 11247999999999888754 35899999999998655322110 0 0000000000 011 11
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+...+|+|+++..++....... . +.+..+.++
T Consensus 215 ~~~~peeva~~~~~L~s~~~~~~-~-G~~i~vdgg 247 (251)
T PRK12481 215 RWGTPDDLAGPAIFLSSSASDYV-T-GYTLAVDGG 247 (251)
T ss_pred CCcCHHHHHHHHHHHhCccccCc-C-CceEEECCC
Confidence 35678999999998886433222 1 566666554
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1e-13 Score=133.49 Aligned_cols=227 Identities=11% Similarity=0.058 Sum_probs=143.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... .+++.+ .++.. ..++..
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~---~vv~~~~~~~~---~~~~~~---------~~~~~---------~~~~~~ 63 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGA---TIVFNDINQEL---VDKGLA---------AYREL---------GIEAHG 63 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHHH---HHHHHH---------HHHhc---------CCceEE
Confidence 4689999999999999999999999996 45777665421 111111 11110 246888
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.+...+++|+.|+..+.+.+... .
T Consensus 64 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (265)
T PRK07097 64 YVCDVTD-------EDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK 136 (265)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 9999994 44333433 358999999997542 2456778899999999888776542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||....... .
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 154 (265)
T PRK07097 137 GHGKIINICSMMSELGR--------------------------------------------------------------E 154 (265)
T ss_pred CCcEEEEEcCccccCCC--------------------------------------------------------------C
Confidence 45689999985322110 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.+|+..+.+.+.+ ..++.++.++|+.|..+...+...-... .....+...+.. . .....
T Consensus 155 ~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~-~--------~~~~~ 224 (265)
T PRK07097 155 TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQAD-GSRHPFDQFIIA-K--------TPAAR 224 (265)
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcccc-ccchhHHHHHHh-c--------CCccC
Confidence 2467999999999988766 3589999999999988754332110000 000001000000 0 00113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|+.++.++........ +.++.+.++
T Consensus 225 ~~~~~dva~~~~~l~~~~~~~~~--g~~~~~~gg 256 (265)
T PRK07097 225 WGDPEDLAGPAVFLASDASNFVN--GHILYVDGG 256 (265)
T ss_pred CcCHHHHHHHHHHHhCcccCCCC--CCEEEECCC
Confidence 55678999999998864222211 677777766
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5e-14 Score=134.64 Aligned_cols=222 Identities=16% Similarity=0.124 Sum_probs=143.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||++++.+|++.|. +|+++.|+.+. .+++.+++ .+ ...++..
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 60 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGA---KVVVADRDAAG---GEETVALI---------RE---------AGGEALF 60 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHHHH---------Hh---------cCCceEE
Confidence 5689999999999999999999999996 56888886532 12211111 11 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHh-c--
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN----F----DERYDVALDLNTFGAKHVLNFSKK-C-- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (492)
+.+|+++ .+....++ .++|+|||+||... + .+.+...+++|+.++..+++.+.. +
T Consensus 61 ~~~D~~~-------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 133 (253)
T PRK06172 61 VACDVTR-------DAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLA 133 (253)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999994 33333333 35799999999642 1 145677889999999877665432 1
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||...+...
T Consensus 134 ~~~~~ii~~sS~~~~~~~-------------------------------------------------------------- 151 (253)
T PRK06172 134 QGGGAIVNTASVAGLGAA-------------------------------------------------------------- 151 (253)
T ss_pred cCCcEEEEECchhhccCC--------------------------------------------------------------
Confidence 134689999986554321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.+ ..++++.++.|+.|-.+..++... ........+ ... ....
T Consensus 152 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~------~~~~~~~~~-~~~--------~~~~ 216 (253)
T PRK06172 152 PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE------ADPRKAEFA-AAM--------HPVG 216 (253)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc------cChHHHHHH-hcc--------CCCC
Confidence 12457999999988887655 357999999999886655432211 011111111 000 0011
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+...+++++.++.++........ |.++++.++
T Consensus 217 ~~~~p~~ia~~~~~l~~~~~~~~~--G~~i~~dgg 249 (253)
T PRK06172 217 RIGKVEEVASAVLYLCSDGASFTT--GHALMVDGG 249 (253)
T ss_pred CccCHHHHHHHHHHHhCccccCcC--CcEEEECCC
Confidence 346789999999888864332221 778887776
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.3e-14 Score=136.50 Aligned_cols=162 Identities=18% Similarity=0.092 Sum_probs=115.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|++|||||||+||+.++++|++.|. +|+++.|+... .+.+. .+.+ ..++.++.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~~-------~~~~~~~~~ 55 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW---RVGAYDINEAG---LAALA-------------AELG-------AGNAWTGAL 55 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHHH---HHHHH-------------HHhc-------CCceEEEEe
Confidence 6899999999999999999999996 55788886432 11111 1100 246889999
Q ss_pred CCCCCCCCCCchhhHHHh--------ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---ccc
Q 037479 93 DITREDLGVKDSNLREEM--------WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AKL 154 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~--------~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~ 154 (492)
|+++ .+....+ ..++|+|||+||.... .+.++..+++|+.|+.++++++.+. .+.
T Consensus 56 D~~~-------~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 128 (260)
T PRK08267 56 DVTD-------RAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPG 128 (260)
T ss_pred cCCC-------HHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 9995 3333333 2367999999997542 1456788999999999999887542 134
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... ...
T Consensus 129 ~~iv~isS~~~~~~~--------------------------------------------------------------~~~ 146 (260)
T PRK08267 129 ARVINTSSASAIYGQ--------------------------------------------------------------PGL 146 (260)
T ss_pred CEEEEeCchhhCcCC--------------------------------------------------------------CCc
Confidence 689999985433211 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
..|+.||+..+.+.+.. ..++++++++|+.+-...
T Consensus 147 ~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~ 186 (260)
T PRK08267 147 AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM 186 (260)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence 57999999988887765 357999999999886543
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.1e-14 Score=136.41 Aligned_cols=168 Identities=18% Similarity=0.204 Sum_probs=119.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||+++++.|++.|+ +|+++.|+... .+.+. ..++.. ..++..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~---~Vi~~~r~~~~---~~~~~---------~~l~~~---------~~~~~~ 62 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA---KVVLASRRVER---LKELR---------AEIEAE---------GGAAHV 62 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCcEEE
Confidence 5789999999999999999999999886 56888886432 11111 111111 246788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+....+++ ++|+|||+|+.... .+.++..+++|+.|+.++++.+....
T Consensus 63 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (258)
T PRK06949 63 VSLDVTD-------YQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIAR 135 (258)
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 9999994 333334333 68999999996432 13567789999999999988775310
Q ss_pred c--------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhh
Q 037479 153 K--------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLG 224 (492)
Q Consensus 153 ~--------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (492)
. ..++|++||.......
T Consensus 136 ~~~~~~~~~~g~iv~~sS~~~~~~~------------------------------------------------------- 160 (258)
T PRK06949 136 AKGAGNTKPGGRIINIASVAGLRVL------------------------------------------------------- 160 (258)
T ss_pred CCcCCCCCCCeEEEEECcccccCCC-------------------------------------------------------
Confidence 1 2479999986544211
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCC
Q 037479 225 IKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 225 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~ 270 (492)
...+.|+.+|+..|.+++.+ ..++++++++|+.|.++..
T Consensus 161 -------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 161 -------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 23467999999999888765 3479999999999988754
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-13 Score=129.26 Aligned_cols=216 Identities=13% Similarity=0.117 Sum_probs=135.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|++|||||||+||++++++|++.|+ +|+++.|+.. ...+.+..+ +.. ...++..+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~---------~~~---------~~~~~~~~~~ 57 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY---RVAANCGPNE--ERAEAWLQE---------QGA---------LGFDFRVVEG 57 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCH--HHHHHHHHH---------HHh---------hCCceEEEEe
Confidence 6899999999999999999999996 4577777321 111111100 000 1246889999
Q ss_pred CCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhcccc
Q 037479 93 DITREDLGVKDSNLREEM-------WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKCAKL 154 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~ 154 (492)
|+++ ++..+.+ ..++|+|||+||.... .+.+...+++|+.++..+++.+ ++. +.
T Consensus 58 D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~ 129 (242)
T TIGR01829 58 DVSS-------FESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GW 129 (242)
T ss_pred cCCC-------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CC
Confidence 9994 3333232 2468999999986532 1346677899999988866554 333 45
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... ...
T Consensus 130 ~~iv~iss~~~~~~~--------------------------------------------------------------~~~ 147 (242)
T TIGR01829 130 GRIINISSVNGQKGQ--------------------------------------------------------------FGQ 147 (242)
T ss_pred cEEEEEcchhhcCCC--------------------------------------------------------------CCc
Confidence 689999985432111 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.+|+..+.+++.+ ..+++++.++|+.+.++...+.+ ...+..+..+. ....+.
T Consensus 148 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~ 209 (242)
T TIGR01829 148 TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR---------EDVLNSIVAQI---------PVGRLG 209 (242)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc---------hHHHHHHHhcC---------CCCCCc
Confidence 57999999777766544 35899999999999876543221 11111111110 111345
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+++++++..++.+..... . ++++.+.++
T Consensus 210 ~~~~~a~~~~~l~~~~~~~~-~-G~~~~~~gg 239 (242)
T TIGR01829 210 RPEEIAAAVAFLASEEAGYI-T-GATLSINGG 239 (242)
T ss_pred CHHHHHHHHHHHcCchhcCc-c-CCEEEecCC
Confidence 67889998877665322222 2 778888776
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-13 Score=133.32 Aligned_cols=170 Identities=15% Similarity=0.232 Sum_probs=114.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH-HHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA-TVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~-~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++++++||||||+||+++++.|++.|+ +|+++.|+...... ...+. .....++.. ..++.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~------~~~~~~~~~---------~~~~~ 65 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGA---NIVIAAKTAEPHPKLPGTIH------TAAEEIEAA---------GGQAL 65 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecccccccchhhHHH------HHHHHHHhc---------CCceE
Confidence 4679999999999999999999999996 55888887543211 11111 001111111 24678
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
++.+|+++ .+....++ .++|+|||+||..... +.++..+++|+.|+.++++++....
T Consensus 66 ~~~~D~~~-------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~ 138 (273)
T PRK08278 66 PLVGDVRD-------EDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKK 138 (273)
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHh
Confidence 89999995 33333333 3689999999975321 3467789999999999999987531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|++||.. +... .+ .
T Consensus 139 ~~~g~iv~iss~~--~~~~------~~----------------------------------------------------~ 158 (273)
T PRK08278 139 SENPHILTLSPPL--NLDP------KW----------------------------------------------------F 158 (273)
T ss_pred cCCCEEEEECCch--hccc------cc----------------------------------------------------c
Confidence 123678887632 1110 00 0
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTI 264 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~ 264 (492)
.....|+.||+..|.+++.+ ..++.++.+.|+.
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 159 APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 23468999999999998865 3479999999983
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.9e-14 Score=134.63 Aligned_cols=222 Identities=15% Similarity=0.146 Sum_probs=140.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++++++|||||+|+||+.++++|++.|+ +|+++.|+.... +.+.++ +.+ ...++.+
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~---~V~~~~r~~~~~---~~~~~~---------~~~---------~~~~~~~ 62 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA---NVAVASRSQEKV---DAAVAQ---------LQQ---------AGPEGLG 62 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHH---------HHH---------hCCceEE
Confidence 5789999999999999999999999986 458888864321 111101 100 0145678
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--K 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~ 153 (492)
+.+|+++ ++..+.++ .++|+|||+|+.... .+.++..+++|+.|+.++++++...- .
T Consensus 63 ~~~Dv~~-------~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~ 135 (264)
T PRK07576 63 VSADVRD-------YAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP 135 (264)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 8999994 34333433 357999999985321 24467788999999999999876521 1
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||....... ..
T Consensus 136 ~g~iv~iss~~~~~~~--------------------------------------------------------------~~ 153 (264)
T PRK07576 136 GASIIQISAPQAFVPM--------------------------------------------------------------PM 153 (264)
T ss_pred CCEEEEECChhhccCC--------------------------------------------------------------CC
Confidence 2489999986433111 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..|.+++.. ..+++++.++|+.+.++... ..+... ......+.. . . .....
T Consensus 154 ~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~--~~~~~~----~~~~~~~~~-~---~-----~~~~~ 218 (264)
T PRK07576 154 QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM--ARLAPS----PELQAAVAQ-S---V-----PLKRN 218 (264)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH--hhcccC----HHHHHHHHh-c---C-----CCCCC
Confidence 357999999999998865 35799999999988653210 111110 000000000 0 0 11235
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....|+|++++.++........ +..+.+.++
T Consensus 219 ~~~~dva~~~~~l~~~~~~~~~--G~~~~~~gg 249 (264)
T PRK07576 219 GTKQDIANAALFLASDMASYIT--GVVLPVDGG 249 (264)
T ss_pred CCHHHHHHHHHHHcChhhcCcc--CCEEEECCC
Confidence 6789999999998864222111 566666665
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-13 Score=129.91 Aligned_cols=198 Identities=17% Similarity=0.118 Sum_probs=127.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++|+||||||+||++++++|++.|. .+|+++.|+.... .+.+.+++ ... ...+++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg--~~V~~~~r~~~~~--~~~~~~~l---------~~~--------~~~~v~~~ 65 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAP--ARVVLAALPDDPR--RDAAVAQM---------KAA--------GASSVEVI 65 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCC--CeEEEEeCCcchh--HHHHHHHH---------Hhc--------CCCceEEE
Confidence 578999999999999999999999852 2568888875421 11111111 110 01368899
Q ss_pred ecCCCCCCCCCCchhhHHHhc--cCccEEEEcccccCcc----hh---HHHHHHHhHHHHHHH----HHHHHhcccceeE
Q 037479 91 PGDITREDLGVKDSNLREEMW--NKLDVVINLAATTNFD----ER---YDVALDLNTFGAKHV----LNFSKKCAKLIVL 157 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~--~~vd~Vih~Aa~~~~~----~~---~~~~~~~Nv~gt~~l----l~~a~~~~~~~~~ 157 (492)
.+|+++++- -.+..+.+. .++|++||+||..... .. ....+++|+.|+..+ +.++++. +..+|
T Consensus 66 ~~D~~~~~~---~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~i 141 (253)
T PRK07904 66 DFDALDTDS---HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQI 141 (253)
T ss_pred EecCCChHH---HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceE
Confidence 999995321 011122222 3799999999875321 11 224689999998874 4555554 45789
Q ss_pred EEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchH
Q 037479 158 VHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTY 237 (492)
Q Consensus 158 V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y 237 (492)
|++||....... .....|
T Consensus 142 v~isS~~g~~~~--------------------------------------------------------------~~~~~Y 159 (253)
T PRK07904 142 IAMSSVAGERVR--------------------------------------------------------------RSNFVY 159 (253)
T ss_pred EEEechhhcCCC--------------------------------------------------------------CCCcch
Confidence 999996432110 122469
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehh
Q 037479 238 VFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPAD 312 (492)
Q Consensus 238 ~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vd 312 (492)
+.||+....+.+.. ..++++++++|+.|..+..... . .. ...++.+
T Consensus 160 ~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~-------~------------------~~----~~~~~~~ 210 (253)
T PRK07904 160 GSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA-------K------------------EA----PLTVDKE 210 (253)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC-------C------------------CC----CCCCCHH
Confidence 99999887665443 4589999999999876432100 0 00 0146889
Q ss_pred hhhhHHHHHHHh
Q 037479 313 MVVNAIVVAVVA 324 (492)
Q Consensus 313 dva~~ii~~~~~ 324 (492)
++|+.++.++.+
T Consensus 211 ~~A~~i~~~~~~ 222 (253)
T PRK07904 211 DVAKLAVTAVAK 222 (253)
T ss_pred HHHHHHHHHHHc
Confidence 999999998873
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.9e-14 Score=136.42 Aligned_cols=158 Identities=16% Similarity=0.175 Sum_probs=112.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++||||||+||+++++.|++.|+ +|+++.|+... .+.+. ..++.++.+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~------------------------~~~~~~~~~ 51 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY---EVWATARKAED---VEALA------------------------AAGFTAVQL 51 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH------------------------HCCCeEEEe
Confidence 6899999999999999999999996 55888886421 11111 134678899
Q ss_pred CCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--cccee
Q 037479 93 DITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--AKLIV 156 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~ 156 (492)
|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..+
T Consensus 52 Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~ 124 (274)
T PRK05693 52 DVND-------GAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGL 124 (274)
T ss_pred eCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCE
Confidence 9994 33333333 468999999996532 1456778999999999998887542 12357
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|++||....... .....
T Consensus 125 iv~isS~~~~~~~--------------------------------------------------------------~~~~~ 142 (274)
T PRK05693 125 VVNIGSVSGVLVT--------------------------------------------------------------PFAGA 142 (274)
T ss_pred EEEECCccccCCC--------------------------------------------------------------CCccH
Confidence 8888885432111 12457
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
|+.||+..+.+...+ ..|+++++++|+.|..+.
T Consensus 143 Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 143 YCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 999999988876544 358999999999987653
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-13 Score=131.33 Aligned_cols=222 Identities=16% Similarity=0.225 Sum_probs=135.9
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+|+||||+|+||+++++.|++.|+ +|+++.|+... ..+.+.++ +....+ ...+..+.+|
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~---~v~~~~r~~~~--~~~~~~~~---------~~~~~~-------~~~~~~~~~D 59 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA---KVFLTDINDAA--GLDAFAAE---------INAAHG-------EGVAFAAVQD 59 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcch--HHHHHHHH---------HHhcCC-------CceEEEEEee
Confidence 389999999999999999999996 55888886321 12222211 111100 1234568899
Q ss_pred CCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHH----HHHHHHHHHHhcccce
Q 037479 94 ITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTF----GAKHVLNFSKKCAKLI 155 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~----gt~~ll~~a~~~~~~~ 155 (492)
+++ .+..+.++ .++|+|||+||..... +.....+++|+. +++.++..+++. +.+
T Consensus 60 ~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~ 131 (251)
T PRK07069 60 VTD-------EAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPA 131 (251)
T ss_pred cCC-------HHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCc
Confidence 994 33333333 4689999999976432 345677889998 677777777765 567
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
+||++||...+... ....
T Consensus 132 ~ii~~ss~~~~~~~--------------------------------------------------------------~~~~ 149 (251)
T PRK07069 132 SIVNISSVAAFKAE--------------------------------------------------------------PDYT 149 (251)
T ss_pred EEEEecChhhccCC--------------------------------------------------------------CCCc
Confidence 89999997655322 1234
Q ss_pred hHHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 236 TYVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
.|+.+|+..+.+++.+ ..+++++.++|+.+.++...+..... . .......+.++. ....+
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---~-~~~~~~~~~~~~---------~~~~~ 216 (251)
T PRK07069 150 AYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRL---G-EEEATRKLARGV---------PLGRL 216 (251)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhc---c-chhHHHHHhccC---------CCCCC
Confidence 7999999988887754 12589999999998877643211100 0 011111111111 11234
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..++|++++++.++....... . +..+-+.++
T Consensus 217 ~~~~~va~~~~~l~~~~~~~~-~-g~~i~~~~g 247 (251)
T PRK07069 217 GEPDDVAHAVLYLASDESRFV-T-GAELVIDGG 247 (251)
T ss_pred cCHHHHHHHHHHHcCccccCc-c-CCEEEECCC
Confidence 578999999988765322111 1 555555443
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1e-13 Score=132.06 Aligned_cols=219 Identities=20% Similarity=0.173 Sum_probs=132.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|+||||||+||+.++..|++.|++ |.++.++... ..+.+. ..++.. ..++..+.
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~---v~~~~~~~~~--~~~~~~---------~~~~~~---------~~~~~~~~ 58 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWS---VGINYARDAA--AAEETA---------DAVRAA---------GGRACVVA 58 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHH---------HHHHhc---------CCcEEEEE
Confidence 469999999999999999999999864 3554443211 111111 111110 24688999
Q ss_pred cCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHH-hccc--
Q 037479 92 GDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSK-KCAK-- 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~-~~~~-- 153 (492)
+|++++ +..+.+ ..++|+|||+||.... .+.+...+++|+.|+..+++.+. .+..
T Consensus 59 ~Dl~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (248)
T PRK06947 59 GDVANE-------ADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDR 131 (248)
T ss_pred eccCCH-------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC
Confidence 999953 322222 2469999999996432 13456779999999998875443 3311
Q ss_pred ---ceeEEEeeeceee-cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 154 ---LIVLVHVSTAFVW-GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 154 ---~~~~V~vST~~v~-~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
-.+||++||.... +..
T Consensus 132 ~~~~~~ii~~sS~~~~~~~~------------------------------------------------------------ 151 (248)
T PRK06947 132 GGRGGAIVNVSSIASRLGSP------------------------------------------------------------ 151 (248)
T ss_pred CCCCcEEEEECchhhcCCCC------------------------------------------------------------
Confidence 1259999985432 211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+++.+ ..+++++++||+.|..+.... .+......... +.. +
T Consensus 152 --~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~--------~~~~~~~~~~~-~~~---~----- 212 (248)
T PRK06947 152 --NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS--------GGQPGRAARLG-AQT---P----- 212 (248)
T ss_pred --CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccc--------cCCHHHHHHHh-hcC---C-----
Confidence 11246999999999887655 347999999999987764311 00001110000 000 0
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-...++++++.++.++.+..... . +.++.+.++
T Consensus 213 ~~~~~~~e~va~~~~~l~~~~~~~~-~-G~~~~~~gg 247 (248)
T PRK06947 213 LGRAGEADEVAETIVWLLSDAASYV-T-GALLDVGGG 247 (248)
T ss_pred CCCCcCHHHHHHHHHHHcCccccCc-C-CceEeeCCC
Confidence 0113578999999988876432211 1 666666543
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.2e-14 Score=131.93 Aligned_cols=213 Identities=17% Similarity=0.099 Sum_probs=138.6
Q ss_pred EEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCCC
Q 037479 16 LVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDIT 95 (492)
Q Consensus 16 lITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~ 95 (492)
+||||||+||+.++++|++.|+ +|+++.|+... .+.+.. .++ ...+++++.+|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~---~v~~~~r~~~~---~~~~~~---------~~~----------~~~~~~~~~~Dl~ 55 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA---RVTIASRSRDR---LAAAAR---------ALG----------GGAPVRTAALDIT 55 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH---------HHh----------cCCceEEEEccCC
Confidence 6999999999999999999996 45888886321 111110 000 0246788999999
Q ss_pred CCCCCCCchhhHHHhcc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 96 REDLGVKDSNLREEMWN---KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 96 ~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
+.+....+++ ++|++||+|+.... .+.+...+++|+.++.+++++... .+..++|++||...
T Consensus 56 -------~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~g~iv~~ss~~~ 127 (230)
T PRK07041 56 -------DEAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARI-APGGSLTFVSGFAA 127 (230)
T ss_pred -------CHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh-cCCeEEEEECchhh
Confidence 4444445554 58999999986432 245678899999999999995543 35678999998765
Q ss_pred ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 166 WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 166 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
+... .+.+.|+.+|+..|
T Consensus 128 ~~~~--------------------------------------------------------------~~~~~Y~~sK~a~~ 145 (230)
T PRK07041 128 VRPS--------------------------------------------------------------ASGVLQGAINAALE 145 (230)
T ss_pred cCCC--------------------------------------------------------------CcchHHHHHHHHHH
Confidence 5321 23467999999999
Q ss_pred HHHHHhc---CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHH
Q 037479 246 MFIEHLK---ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAV 322 (492)
Q Consensus 246 ~~v~~~~---~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~ 322 (492)
.+++... .+++++.++|+.+-.+.....+ . .....++...... . +. .-+...+|+|+++..++
T Consensus 146 ~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~---~--~~~~~~~~~~~~~-~---~~-----~~~~~~~dva~~~~~l~ 211 (230)
T PRK07041 146 ALARGLALELAPVRVNTVSPGLVDTPLWSKLA---G--DAREAMFAAAAER-L---PA-----RRVGQPEDVANAILFLA 211 (230)
T ss_pred HHHHHHHHHhhCceEEEEeecccccHHHHhhh---c--cchHHHHHHHHhc-C---CC-----CCCcCHHHHHHHHHHHh
Confidence 9987652 3588999999887654321110 0 0011111111110 0 10 01235799999999988
Q ss_pred HhhhcCCCCCCcEEEecCC
Q 037479 323 VAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 323 ~~~~~~~~~~~~iy~i~~~ 341 (492)
.. .... +++|++.++
T Consensus 212 ~~-~~~~---G~~~~v~gg 226 (230)
T PRK07041 212 AN-GFTT---GSTVLVDGG 226 (230)
T ss_pred cC-CCcC---CcEEEeCCC
Confidence 63 2122 788998887
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1e-13 Score=136.42 Aligned_cols=127 Identities=17% Similarity=0.132 Sum_probs=86.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+.... +... ..+.+..+ ..++.+
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~---~vi~~~r~~~~~---~~~~---------~~l~~~~~-------~~~~~~ 71 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGA---HVVLAVRNLDKG---KAAA---------ARITAATP-------GADVTL 71 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHH---------HHHHHhCC-------CCceEE
Confidence 4789999999999999999999999996 557888864221 1111 11111111 146788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-----chhHHHHHHHhHHH----HHHHHHHHHhccc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-----DERYDVALDLNTFG----AKHVLNFSKKCAK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-----~~~~~~~~~~Nv~g----t~~ll~~a~~~~~ 153 (492)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.| +..++..+++. +
T Consensus 72 ~~~Dl~d-------~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~ 143 (306)
T PRK06197 72 QELDLTS-------LASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-P 143 (306)
T ss_pred EECCCCC-------HHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-C
Confidence 9999994 33333333 368999999996532 13456778999999 55666666654 4
Q ss_pred ceeEEEeeeceee
Q 037479 154 LIVLVHVSTAFVW 166 (492)
Q Consensus 154 ~~~~V~vST~~v~ 166 (492)
..++|++||....
T Consensus 144 ~~~iV~vSS~~~~ 156 (306)
T PRK06197 144 GSRVVTVSSGGHR 156 (306)
T ss_pred CCEEEEECCHHHh
Confidence 4689999997543
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-13 Score=135.64 Aligned_cols=201 Identities=17% Similarity=0.198 Sum_probs=131.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||||.||++++++|++.|+ +|+++.|+... .+.+.++ +++ ...++.+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~---~Vvl~~R~~~~---l~~~~~~---------~~~---------~g~~~~~ 60 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGA---RLVLAARDEEA---LQAVAEE---------CRA---------LGAEVLV 60 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHh---------cCCcEEE
Confidence 4679999999999999999999999996 45788886422 1111111 111 1246778
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc---c----hhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF---D----ERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~---~----~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+..+.++ .++|++||+||...+ . +.++..+++|+.|+.++.+.+....
T Consensus 61 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~ 133 (330)
T PRK06139 61 VPTDVTD-------ADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ 133 (330)
T ss_pred EEeeCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc
Confidence 8999994 44444443 468999999996532 1 4466789999999999887764311
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 134 ~~g~iV~isS~~~~~~~--------------------------------------------------------------p 151 (330)
T PRK06139 134 GHGIFINMISLGGFAAQ--------------------------------------------------------------P 151 (330)
T ss_pred CCCEEEEEcChhhcCCC--------------------------------------------------------------C
Confidence 23578999886533211 1
Q ss_pred CCchHHHHHHHH----HHHHHHhc--CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 233 WPNTYVFTKVMG----EMFIEHLK--ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 233 ~~n~Y~~sK~~a----E~~v~~~~--~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
....|+.||+.. |.+..++. .++.++.+.|+.|.++..+... +. .+. ......
T Consensus 152 ~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~----~~-----------~~~------~~~~~~ 210 (330)
T PRK06139 152 YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA----NY-----------TGR------RLTPPP 210 (330)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc----cc-----------ccc------cccCCC
Confidence 245799999964 44444443 3799999999998776432100 00 000 001112
Q ss_pred ceeehhhhhhHHHHHHHh
Q 037479 307 DVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~ 324 (492)
.++..+++|++++.++.+
T Consensus 211 ~~~~pe~vA~~il~~~~~ 228 (330)
T PRK06139 211 PVYDPRRVAKAVVRLADR 228 (330)
T ss_pred CCCCHHHHHHHHHHHHhC
Confidence 357889999999998863
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=130.61 Aligned_cols=225 Identities=12% Similarity=0.077 Sum_probs=137.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++||||+|+||.++++.|++.|. +|+++.|+... .+.+..+ ++. ...++..+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~~---~~~~~~~---------l~~---------~~~~~~~~~~ 56 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF---AVAVADLNEET---AKETAKE---------INQ---------AGGKAVAYKL 56 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHh---------cCCeEEEEEc
Confidence 5899999999999999999999986 45777776321 1111111 111 0246788999
Q ss_pred CCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh----cccc
Q 037479 93 DITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK----CAKL 154 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~ 154 (492)
|+++ ++....++ ..+|+|||+|+.... .+.++..+++|+.++..+++.+.. .+..
T Consensus 57 Dl~~-------~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 129 (254)
T TIGR02415 57 DVSD-------KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG 129 (254)
T ss_pred CCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC
Confidence 9994 44333333 358999999997532 144667899999999888776643 2123
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... ...
T Consensus 130 ~~iv~~sS~~~~~~~--------------------------------------------------------------~~~ 147 (254)
T TIGR02415 130 GKIINAASIAGHEGN--------------------------------------------------------------PIL 147 (254)
T ss_pred eEEEEecchhhcCCC--------------------------------------------------------------CCC
Confidence 589999885433211 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCc--hHHHHHhccCceeeEEecCCCcccc
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRT--IDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
+.|+.+|+..|.+++.. ..++++.+++|+.+..+.............. .......+. .......
T Consensus 148 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 218 (254)
T TIGR02415 148 SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFS---------SEIALGR 218 (254)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHH---------hhCCCCC
Confidence 57999999999888754 3479999999998865542211110000000 000000000 0001113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+++++..++....... . +.++.+.++
T Consensus 219 ~~~~~~~a~~~~~l~~~~~~~~-~-g~~~~~d~g 250 (254)
T TIGR02415 219 PSEPEDVAGLVSFLASEDSDYI-T-GQSILVDGG 250 (254)
T ss_pred CCCHHHHHHHHHhhcccccCCc-c-CcEEEecCC
Confidence 6788999999998887533221 1 555555443
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.1e-13 Score=132.94 Aligned_cols=216 Identities=17% Similarity=0.159 Sum_probs=136.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|. +|++..|+... ..+.+.++ ++.. ..++..
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga---~Vv~~~~~~~~--~~~~~~~~---------i~~~---------g~~~~~ 66 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGA---TVVVNDVASAL--DASDVLDE---------IRAA---------GAKAVA 66 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCchh--HHHHHHHH---------HHhc---------CCeEEE
Confidence 6789999999999999999999999996 44666664221 11111111 1110 246888
Q ss_pred EecCCCCCCCCCCchhhHHHhc------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhccc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCAK--- 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~--- 153 (492)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.....
T Consensus 67 ~~~Dv~d-------~~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~ 139 (306)
T PRK07792 67 VAGDISQ-------RATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKA 139 (306)
T ss_pred EeCCCCC-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Confidence 9999995 33333333 468999999997642 245678899999999999988753210
Q ss_pred -------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 154 -------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 154 -------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
-.++|++||.......
T Consensus 140 ~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------- 162 (306)
T PRK07792 140 KAAGGPVYGRIVNTSSEAGLVGP--------------------------------------------------------- 162 (306)
T ss_pred cccCCCCCcEEEEECCcccccCC---------------------------------------------------------
Confidence 1378999885433211
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~ 301 (492)
.....|+.||+..+.+.+.+ ..|+++..+.|+. ...... +.... ....
T Consensus 163 -----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~---~~~~~---~~~~--------------- 215 (306)
T PRK07792 163 -----VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTA---DVFGD---APDV--------------- 215 (306)
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhh---hhccc---cchh---------------
Confidence 12347999999999988754 3589999999973 111100 00000 0000
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+.+++++|++++..++....... . +++|.+.++
T Consensus 216 ~~~~~~~~~pe~va~~v~~L~s~~~~~~-t-G~~~~v~gg 253 (306)
T PRK07792 216 EAGGIDPLSPEHVVPLVQFLASPAAAEV-N-GQVFIVYGP 253 (306)
T ss_pred hhhccCCCCHHHHHHHHHHHcCccccCC-C-CCEEEEcCC
Confidence 0011234578999999888775322222 2 778888765
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.7e-13 Score=130.09 Aligned_cols=192 Identities=18% Similarity=0.142 Sum_probs=130.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|+||||||+||.++++.|+++|+ +|+++.|+.... +.+.++ ++.. ...++.++.
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~---~Vi~~~r~~~~~---~~~~~~---------~~~~--------~~~~~~~~~ 57 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGA---RLYLAARDVERL---ERLADD---------LRAR--------GAVAVSTHE 57 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCC---EEEEEeCCHHHH---HHHHHH---------HHHh--------cCCeEEEEe
Confidence 36899999999999999999999996 458888865321 111111 1111 125788999
Q ss_pred cCCCCCCCCCCchhhHHHhc----cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhc---ccceeE
Q 037479 92 GDITREDLGVKDSNLREEMW----NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKC---AKLIVL 157 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~----~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~ 157 (492)
+|++++ +..+.++ +++|+|||+||..... +.....+++|+.|+.++++.+... .+..+|
T Consensus 58 ~Dl~~~-------~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 130 (243)
T PRK07102 58 LDILDT-------ASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTI 130 (243)
T ss_pred cCCCCh-------HHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEE
Confidence 999953 3333333 3579999999865321 334567899999999999887652 145689
Q ss_pred EEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchH
Q 037479 158 VHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTY 237 (492)
Q Consensus 158 V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y 237 (492)
|++||....... .....|
T Consensus 131 v~~sS~~~~~~~--------------------------------------------------------------~~~~~Y 148 (243)
T PRK07102 131 VGISSVAGDRGR--------------------------------------------------------------ASNYVY 148 (243)
T ss_pred EEEecccccCCC--------------------------------------------------------------CCCccc
Confidence 999986422111 112469
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehh
Q 037479 238 VFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPAD 312 (492)
Q Consensus 238 ~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vd 312 (492)
+.||+..+.+.+.+ ..++++.+++|+.|.++...... .+ ..-.+.++
T Consensus 149 ~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~-----------------------~~-----~~~~~~~~ 200 (243)
T PRK07102 149 GSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK-----------------------LP-----GPLTAQPE 200 (243)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC-----------------------CC-----ccccCCHH
Confidence 99999988887754 45899999999998876331100 00 01246789
Q ss_pred hhhhHHHHHHH
Q 037479 313 MVVNAIVVAVV 323 (492)
Q Consensus 313 dva~~ii~~~~ 323 (492)
++++.++.++.
T Consensus 201 ~~a~~i~~~~~ 211 (243)
T PRK07102 201 EVAKDIFRAIE 211 (243)
T ss_pred HHHHHHHHHHh
Confidence 99999988876
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-13 Score=132.76 Aligned_cols=197 Identities=20% Similarity=0.177 Sum_probs=130.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++|+||||+|+||+.++++|++.|+ +|+++.|+... .+.+.++ + + ...++.++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~--~--------~~~~~~~~ 58 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA---RLLLVGRNAEK---LEALAAR---------L--P--------YPGRHRWV 58 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------H--h--------cCCceEEE
Confidence 578999999999999999999999996 45888886321 1111111 1 0 02578899
Q ss_pred ecCCCCCCCCCCchhhHHHh------ccCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcc---cc
Q 037479 91 PGDITREDLGVKDSNLREEM------WNKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCA---KL 154 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~------~~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~---~~ 154 (492)
.+|+++ .+..+.+ ...+|+|||+||...+. +.+...+++|+.|+.++++.+.+.. +.
T Consensus 59 ~~D~~d-------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 131 (263)
T PRK09072 59 VADLTS-------EAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPS 131 (263)
T ss_pred EccCCC-------HHHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 999995 3333232 24689999999976431 3456788999999999999886421 23
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... ...
T Consensus 132 ~~iv~isS~~~~~~~--------------------------------------------------------------~~~ 149 (263)
T PRK09072 132 AMVVNVGSTFGSIGY--------------------------------------------------------------PGY 149 (263)
T ss_pred CEEEEecChhhCcCC--------------------------------------------------------------CCc
Confidence 568888875432111 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+++.+ ..++.++.+.|+.+.++...+...+ .... ......
T Consensus 150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~--------------~~~~---------~~~~~~ 206 (263)
T PRK09072 150 ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA--------------LNRA---------LGNAMD 206 (263)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc--------------cccc---------ccCCCC
Confidence 56999999877766544 3579999999988765432110000 0000 011356
Q ss_pred ehhhhhhHHHHHHHh
Q 037479 310 PADMVVNAIVVAVVA 324 (492)
Q Consensus 310 ~vddva~~ii~~~~~ 324 (492)
.++++|++++.++.+
T Consensus 207 ~~~~va~~i~~~~~~ 221 (263)
T PRK09072 207 DPEDVAAAVLQAIEK 221 (263)
T ss_pred CHHHHHHHHHHHHhC
Confidence 789999999998874
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.8e-13 Score=147.81 Aligned_cols=230 Identities=14% Similarity=0.123 Sum_probs=142.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|. +|+++.|+... .+.+. ..+..+.+ ..++..
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga---~Vvi~~r~~~~---~~~~~---------~~l~~~~~-------~~~~~~ 469 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGA---HVVLADLNLEA---AEAVA---------AEINGQFG-------AGRAVA 469 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCCHHH---HHHHH---------HHHHhhcC-------CCcEEE
Confidence 5689999999999999999999999996 55788775432 11111 11111111 135778
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh----c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK----C 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~----~ 151 (492)
+.+|+++ .+....+++ ++|+|||+||.... .+.+...+++|+.|...+.+.+.. .
T Consensus 470 v~~Dvtd-------~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~ 542 (676)
T TIGR02632 470 LKMDVTD-------EQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQ 542 (676)
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999994 444434443 68999999997532 134677889999998877655432 2
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+.-.++|++||.......
T Consensus 543 ~~~g~IV~iSS~~a~~~~-------------------------------------------------------------- 560 (676)
T TIGR02632 543 GLGGNIVFIASKNAVYAG-------------------------------------------------------------- 560 (676)
T ss_pred CCCCEEEEEeChhhcCCC--------------------------------------------------------------
Confidence 112479999985432111
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCcee-cCCCCCCCccccCc---CchH-HHHHhccCceeeEEecC
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIIT-GTYKEPFPGWAEGI---RTID-SLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~-g~~~~p~~gw~~~~---~~~~-~~~~~~~~g~~~~~~~~ 301 (492)
.....|+.||+..|.+++.+ ..++++..++|+.|. |+... ..+|.... .+.. .-+.. ....
T Consensus 561 ~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~ 631 (676)
T TIGR02632 561 KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIW-DGEWREERAAAYGIPADELEE--------HYAK 631 (676)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccc-cccchhhhhhcccCChHHHHH--------HHHh
Confidence 12468999999999998765 347999999999886 32110 01121110 0000 00000 0011
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
......++..+|||+++..++....... . +.++++.++
T Consensus 632 r~~l~r~v~peDVA~av~~L~s~~~~~~-T-G~~i~vDGG 669 (676)
T TIGR02632 632 RTLLKRHIFPADIAEAVFFLASSKSEKT-T-GCIITVDGG 669 (676)
T ss_pred cCCcCCCcCHHHHHHHHHHHhCCcccCC-c-CcEEEECCC
Confidence 1222356888999999998875322222 2 788998877
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-13 Score=132.98 Aligned_cols=155 Identities=20% Similarity=0.219 Sum_probs=114.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||+++++.|++.|. +|.++.|+..... ..++.+
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~---~v~~~~~~~~~~~------------------------------~~~~~~ 53 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGA---NVVNADIHGGDGQ------------------------------HENYQF 53 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCccccc------------------------------cCceEE
Confidence 5789999999999999999999999996 4577777543211 145778
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc----------------chhHHHHHHHhHHHHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF----------------DERYDVALDLNTFGAKHVLN 146 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~----------------~~~~~~~~~~Nv~gt~~ll~ 146 (492)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++
T Consensus 54 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 126 (266)
T PRK06171 54 VPTDVSS-------AEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQ 126 (266)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHH
Confidence 9999994 43333333 368999999996421 13467789999999999999
Q ss_pred HHHhcc---cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhh
Q 037479 147 FSKKCA---KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDL 223 (492)
Q Consensus 147 ~a~~~~---~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (492)
++.... +-.++|++||.......
T Consensus 127 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 152 (266)
T PRK06171 127 AVARQMVKQHDGVIVNMSSEAGLEGS------------------------------------------------------ 152 (266)
T ss_pred HHHHHHHhcCCcEEEEEccccccCCC------------------------------------------------------
Confidence 887531 23479999986543211
Q ss_pred hccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCcee
Q 037479 224 GIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIIT 266 (492)
Q Consensus 224 ~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~ 266 (492)
.....|+.||+..+.+++.+ ..++++.+++|+.+-
T Consensus 153 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 153 --------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 12357999999999888765 358999999999884
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.1e-13 Score=126.57 Aligned_cols=175 Identities=15% Similarity=0.122 Sum_probs=115.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||+|+||++++++|++.|+ +|+++.|+... .+.+. +.+++.. ...+..
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~---~V~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~~ 60 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGA---TVILVARHQKK---LEKVY---------DAIVEAG--------HPEPFA 60 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCChHH---HHHHH---------HHHHHcC--------CCCcce
Confidence 5689999999999999999999999986 56888887532 11111 1111110 134567
Q ss_pred EecCCCCCCCCCCchhhHH---Hhc-cCccEEEEcccccC----cc----hhHHHHHHHhHHHHHHHHHHHHhcc---cc
Q 037479 90 VPGDITREDLGVKDSNLRE---EMW-NKLDVVINLAATTN----FD----ERYDVALDLNTFGAKHVLNFSKKCA---KL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~---~~~-~~vd~Vih~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~~~---~~ 154 (492)
+.+|+++.... +.....+ ..+ .++|+|||+||... +. +.+...+++|+.|+.++++.+.+.. +.
T Consensus 61 ~~~D~~~~~~~-~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 139 (239)
T PRK08703 61 IRFDLMSAEEK-EFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPD 139 (239)
T ss_pred EEeeecccchH-HHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCC
Confidence 78888742100 0011111 112 46899999999642 11 3456788999999999888775521 23
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||...... . ...
T Consensus 140 ~~iv~~ss~~~~~~---------~-----------------------------------------------------~~~ 157 (239)
T PRK08703 140 ASVIFVGESHGETP---------K-----------------------------------------------------AYW 157 (239)
T ss_pred CEEEEEeccccccC---------C-----------------------------------------------------CCc
Confidence 58899888432110 0 123
Q ss_pred chHHHHHHHHHHHHHHh-----c-CCCcEEEEeCCceecCCC
Q 037479 235 NTYVFTKVMGEMFIEHL-----K-ENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~-~~~~~~ivRPs~v~g~~~ 270 (492)
..|+.||+..|.+++.+ . .++++++++|+.|.++..
T Consensus 158 ~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~ 199 (239)
T PRK08703 158 GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR 199 (239)
T ss_pred cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence 57999999999988654 1 269999999999988754
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-13 Score=123.94 Aligned_cols=268 Identities=19% Similarity=0.227 Sum_probs=180.6
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.|-..|..||||-||.=|++|+|-||..|++| +.++|..+.-. ..|+. -+..++. .......
T Consensus 24 ~~r~rkvALITGItGQDGSYLaEfLL~KgYeV---HGiiRRsSsFN-T~RIe-HlY~nP~-------------~h~~~~m 85 (376)
T KOG1372|consen 24 AFRPRKVALITGITGQDGSYLAEFLLSKGYEV---HGIIRRSSSFN-TARIE-HLYSNPH-------------THNGASM 85 (376)
T ss_pred CcccceEEEEecccCCCchHHHHHHHhCCcee---eEEEeeccccc-hhhhh-hhhcCch-------------hccccee
Confidence 34445689999999999999999999999976 78888766543 23333 2222221 1113567
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccC----cchhHHHHHHHhHHHHHHHHHHHHhcc--cceeEEE
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTN----FDERYDVALDLNTFGAKHVLNFSKKCA--KLIVLVH 159 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~~V~ 159 (492)
....||++ |...+..++. +++-|+|+||..+ |+- ++...++...||.+++++.+.+. .--+|-.
T Consensus 86 kLHYgDmT-------Dss~L~k~I~~ikPtEiYnLaAQSHVkvSFdl-peYTAeVdavGtLRlLdAi~~c~l~~~VrfYQ 157 (376)
T KOG1372|consen 86 KLHYGDMT-------DSSCLIKLISTIKPTEVYNLAAQSHVKVSFDL-PEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQ 157 (376)
T ss_pred EEeecccc-------chHHHHHHHhccCchhhhhhhhhcceEEEeec-ccceeeccchhhhhHHHHHHhcCcccceeEEe
Confidence 78899999 5555556666 7899999999754 432 24456778889999999999883 1137888
Q ss_pred eeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 160 VSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 160 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
.||.-.||... |-+..+ ..+..|.++|+.
T Consensus 158 AstSElyGkv~----e~PQsE-----------------------------------------------~TPFyPRSPYa~ 186 (376)
T KOG1372|consen 158 ASTSELYGKVQ----EIPQSE-----------------------------------------------TTPFYPRSPYAA 186 (376)
T ss_pred cccHhhccccc----CCCccc-----------------------------------------------CCCCCCCChhHH
Confidence 99988888532 111111 013367899999
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeE-EecCCCcccceeehhhhhhHH
Q 037479 240 TKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTC-FLGDVKGIVDVIPADMVVNAI 318 (492)
Q Consensus 240 sK~~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~d~v~vddva~~i 318 (492)
+|..+-.++..++...... ..-+|.+-. ..|-.|-.---+.++.-+..+..|.... ..|+-+..+||-|..|-++|+
T Consensus 187 aKmy~~WivvNyREAYnmf-AcNGILFNH-ESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAM 264 (376)
T KOG1372|consen 187 AKMYGYWIVVNYREAYNMF-ACNGILFNH-ESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAM 264 (376)
T ss_pred hhhhheEEEEEhHHhhcce-eeccEeecC-CCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHH
Confidence 9998877765552211111 112344433 2232221111145556666666666554 468999999999999999999
Q ss_pred HHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 319 VVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 319 i~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
...+.+.. ..-|-+..+ ...|.+||++....+.|+.
T Consensus 265 W~mLQ~d~------PdDfViATg--e~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 265 WLMLQQDS------PDDFVIATG--EQHSVREFCNLAFAEIGEV 300 (376)
T ss_pred HHHHhcCC------CCceEEecC--CcccHHHHHHHHHHhhCcE
Confidence 99987533 445888888 7899999999988888854
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.5e-13 Score=126.11 Aligned_cols=220 Identities=12% Similarity=0.118 Sum_probs=138.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+++||||+|+||+++++.|++.|. +|+++.|+... .+.+.++ +++. ..++..+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~---~Vi~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~~ 56 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA---NVVITGRTKEK---LEEAKLE---------IEQF---------PGQVLTVQ 56 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEEEE
Confidence 58999999999999999999999986 56888886422 1121111 1110 24688999
Q ss_pred cCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cc-
Q 037479 92 GDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AK- 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~- 153 (492)
+|+++ ++..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++.+. .+
T Consensus 57 ~D~~~-------~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 129 (252)
T PRK07677 57 MDVRN-------PEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI 129 (252)
T ss_pred ecCCC-------HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC
Confidence 99994 33333333 468999999985321 1446788999999999999988542 12
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||.+..... ..
T Consensus 130 ~g~ii~isS~~~~~~~--------------------------------------------------------------~~ 147 (252)
T PRK07677 130 KGNIINMVATYAWDAG--------------------------------------------------------------PG 147 (252)
T ss_pred CEEEEEEcChhhccCC--------------------------------------------------------------CC
Confidence 3579999986432111 12
Q ss_pred CchHHHHHHHHHHHHHHh----c--CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 234 PNTYVFTKVMGEMFIEHL----K--ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~----~--~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
...|+.||+..+.+.+.. . .|+++..++|+.|.++.... ..|. .......+.+. . ...-
T Consensus 148 ~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~-~~~~-----~~~~~~~~~~~----~-----~~~~ 212 (252)
T PRK07677 148 VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGAD-KLWE-----SEEAAKRTIQS----V-----PLGR 212 (252)
T ss_pred CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccc-cccC-----CHHHHHHHhcc----C-----CCCC
Confidence 346999999988887753 2 48999999999987532110 0010 01111111110 0 0113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+++++..++....... . +.++.+.++
T Consensus 213 ~~~~~~va~~~~~l~~~~~~~~-~-g~~~~~~gg 244 (252)
T PRK07677 213 LGTPEEIAGLAYFLLSDEAAYI-N-GTCITMDGG 244 (252)
T ss_pred CCCHHHHHHHHHHHcCcccccc-C-CCEEEECCC
Confidence 5678899998887765322211 1 667777665
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=130.79 Aligned_cols=158 Identities=15% Similarity=0.130 Sum_probs=112.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+||||||+||++++++|++.|+ +|.++.|+..... . .. ...++.++.+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~---~v~~~~r~~~~~~-----~-------------~~--------~~~~~~~~~~ 52 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGI---AVLGVARSRHPSL-----A-------------AA--------AGERLAEVEL 52 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCC---EEEEEecCcchhh-----h-------------hc--------cCCeEEEEEe
Confidence 5899999999999999999999996 4578888653210 0 00 1246888999
Q ss_pred CCCCCCCCCCchhhHHHhc-----------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 93 DITREDLGVKDSNLREEMW-----------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-----------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
|++++ +..+.++ ..+|++||+||.... .+.+...+++|+.|+..+.+.+.+..
T Consensus 53 D~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 125 (243)
T PRK07023 53 DLSDA-------AAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAAS 125 (243)
T ss_pred ccCCH-------HHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhh
Confidence 99953 3232311 258999999997542 13467788999999777766655421
Q ss_pred --cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 153 --KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 153 --~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
+..++|++||...+...
T Consensus 126 ~~~~~~iv~isS~~~~~~~------------------------------------------------------------- 144 (243)
T PRK07023 126 DAAERRILHISSGAARNAY------------------------------------------------------------- 144 (243)
T ss_pred ccCCCEEEEEeChhhcCCC-------------------------------------------------------------
Confidence 34689999996543211
Q ss_pred CCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecC
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGT 268 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~ 268 (492)
.....|+.+|+..|.+++.+ ..++++.+++|+.+-.+
T Consensus 145 -~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 145 -AGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred -CCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 23458999999999999866 24799999999987554
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.9e-13 Score=131.61 Aligned_cols=207 Identities=16% Similarity=0.159 Sum_probs=135.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++|+||||+|.||..+++.|++.|. +|+++.|+... .+.+. ++.+. ...+..
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---l~~~~-------------~~l~~------~~~~~~ 61 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGA---KLALVDLEEAE---LAALA-------------AELGG------DDRVLT 61 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHhcC------CCcEEE
Confidence 5789999999999999999999999996 56888885421 11111 11110 135667
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--K 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~ 153 (492)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.... +
T Consensus 62 ~~~Dv~d-------~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~ 134 (296)
T PRK05872 62 VVADVTD-------LAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER 134 (296)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 7899994 33333332 468999999997532 24567889999999999999876421 2
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||...+... ..
T Consensus 135 ~g~iv~isS~~~~~~~--------------------------------------------------------------~~ 152 (296)
T PRK05872 135 RGYVLQVSSLAAFAAA--------------------------------------------------------------PG 152 (296)
T ss_pred CCEEEEEeCHhhcCCC--------------------------------------------------------------CC
Confidence 2479999986544321 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+.+.. ..++.+.++.|+.|..+....... . ......+. +... ....-+
T Consensus 153 ~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~---~----~~~~~~~~-~~~~------~p~~~~ 218 (296)
T PRK05872 153 MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADA---D----LPAFRELR-ARLP------WPLRRT 218 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccc---c----chhHHHHH-hhCC------CcccCC
Confidence 357999999999888754 358999999999887654321110 0 01111111 0110 011245
Q ss_pred eehhhhhhHHHHHHHh
Q 037479 309 IPADMVVNAIVVAVVA 324 (492)
Q Consensus 309 v~vddva~~ii~~~~~ 324 (492)
++.+|++++++.++.+
T Consensus 219 ~~~~~va~~i~~~~~~ 234 (296)
T PRK05872 219 TSVEKCAAAFVDGIER 234 (296)
T ss_pred CCHHHHHHHHHHHHhc
Confidence 7899999999988863
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.5e-13 Score=127.13 Aligned_cols=225 Identities=13% Similarity=0.067 Sum_probs=137.4
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
..+++|+++||||+|+||++++++|++.|.+ |+++.|+... ..+.+.+ .+... ...++
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~~--~~~~~~~---------~~~~~--------~~~~~ 61 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVN---IAFTYNSNVE--EANKIAE---------DLEQK--------YGIKA 61 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHH---------HHHHh--------cCCce
Confidence 3468999999999999999999999999974 4565554321 1111110 11111 12468
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC---------c----chhHHHHHHHhHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN---------F----DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~---------~----~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
.++.+|++++ +..+.++ .++|++||+||... + .+.+...+++|+.+...+.+.
T Consensus 62 ~~~~~D~~~~-------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 134 (260)
T PRK08416 62 KAYPLNILEP-------ETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQE 134 (260)
T ss_pred EEEEcCCCCH-------HHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHH
Confidence 8999999953 3333332 36899999997531 1 134566788899887776665
Q ss_pred HHhc-c--cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhh
Q 037479 148 SKKC-A--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLG 224 (492)
Q Consensus 148 a~~~-~--~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (492)
+... . +-.++|++||.......
T Consensus 135 ~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------- 159 (260)
T PRK08416 135 AAKRMEKVGGGSIISLSSTGNLVYI------------------------------------------------------- 159 (260)
T ss_pred HHHhhhccCCEEEEEEeccccccCC-------------------------------------------------------
Confidence 5432 1 33589999985322110
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEe
Q 037479 225 IKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFL 299 (492)
Q Consensus 225 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~ 299 (492)
.....|+.||+..+.+++.+ ..++++..|.|+.|-.+.....++ .......+... .+
T Consensus 160 -------~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~-------~~~~~~~~~~~----~~ 221 (260)
T PRK08416 160 -------ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTN-------YEEVKAKTEEL----SP 221 (260)
T ss_pred -------CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccC-------CHHHHHHHHhc----CC
Confidence 12357999999999988765 348999999998875543221111 01111111000 00
Q ss_pred cCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 300 GDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 300 ~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|++++.++........ +..+.+.++
T Consensus 222 -----~~r~~~p~~va~~~~~l~~~~~~~~~--G~~i~vdgg 256 (260)
T PRK08416 222 -----LNRMGQPEDLAGACLFLCSEKASWLT--GQTIVVDGG 256 (260)
T ss_pred -----CCCCCCHHHHHHHHHHHcChhhhccc--CcEEEEcCC
Confidence 11256789999999988764332221 677777654
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.9e-13 Score=145.63 Aligned_cols=195 Identities=19% Similarity=0.250 Sum_probs=135.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||||+||++++++|++.|+ +|+++.|+... .+.+.++ +... ..++.+
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 424 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGA---TVFLVARNGEA---LDELVAE---------IRAK---------GGTAHA 424 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 5689999999999999999999999996 56888886422 1111111 1110 246888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc--
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF---------DERYDVALDLNTFGAKHVLNFSKKC-- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (492)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 425 ~~~Dv~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 497 (657)
T PRK07201 425 YTCDLTD-------SAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMR 497 (657)
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999994 443434433 68999999996421 1346778999999998887765431
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..++|++||..++...
T Consensus 498 ~~~~g~iv~isS~~~~~~~------------------------------------------------------------- 516 (657)
T PRK07201 498 ERRFGHVVNVSSIGVQTNA------------------------------------------------------------- 516 (657)
T ss_pred hcCCCEEEEECChhhcCCC-------------------------------------------------------------
Confidence 145689999997665432
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..+.+.+.+ ..++.+++++|+.|..+...+.. .. ..
T Consensus 517 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~-------------------~~--------~~ 568 (657)
T PRK07201 517 -PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK-------------------RY--------NN 568 (657)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc-------------------cc--------cC
Confidence 12357999999999988754 35899999999998765442210 00 01
Q ss_pred cceeehhhhhhHHHHHHHh
Q 037479 306 VDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~ 324 (492)
...++.+++|+.++.++.+
T Consensus 569 ~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 569 VPTISPEEAADMVVRAIVE 587 (657)
T ss_pred CCCCCHHHHHHHHHHHHHh
Confidence 1357889999999988763
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-13 Score=131.43 Aligned_cols=165 Identities=17% Similarity=0.213 Sum_probs=115.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++||||||+||++++++|++.|+ +|+++.|+... .+.+. +. ...++..
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~l~-------------~~--------~~~~~~~ 55 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGA---RVAVLDKSAAG---LQELE-------------AA--------HGDAVVG 55 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------hh--------cCCceEE
Confidence 4689999999999999999999999996 45777775421 11111 11 1246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------c-----hhHHHHHHHhHHHHHHHHHHHHh
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------D-----ERYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~-----~~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
+.+|+++ .+....++ .++|++||+||.... . +.++..+++|+.|+..+++++..
T Consensus 56 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 128 (262)
T TIGR03325 56 VEGDVRS-------LDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP 128 (262)
T ss_pred EEeccCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence 9999994 33232322 468999999986421 1 23567899999999999998865
Q ss_pred cc--cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 151 CA--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 151 ~~--~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
.. .-.++|++||.......
T Consensus 129 ~~~~~~g~iv~~sS~~~~~~~----------------------------------------------------------- 149 (262)
T TIGR03325 129 ALVASRGSVIFTISNAGFYPN----------------------------------------------------------- 149 (262)
T ss_pred HHhhcCCCEEEEeccceecCC-----------------------------------------------------------
Confidence 31 11468888875433111
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~ 270 (492)
.....|+.||+..+.+++.+ .+.+++..+.|+.|..+..
T Consensus 150 ---~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~ 192 (262)
T TIGR03325 150 ---GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLR 192 (262)
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCc
Confidence 12347999999999998765 3358999999999876543
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-12 Score=121.95 Aligned_cols=196 Identities=14% Similarity=0.154 Sum_probs=131.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++++||||||+||++++++|++.|+ +|+++.|+... .+++. ..+++++.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~---~v~~~~r~~~~---~~~~~------------------------~~~~~~~~~ 51 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW---RVIATARDAAA---LAALQ------------------------ALGAEALAL 51 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC---EEEEEECCHHH---HHHHH------------------------hccceEEEe
Confidence 6899999999999999999999886 45788776432 12221 123567899
Q ss_pred CCCCCCCCCCchhhHHHh---cc--CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhcc--ccee
Q 037479 93 DITREDLGVKDSNLREEM---WN--KLDVVINLAATTNF---------DERYDVALDLNTFGAKHVLNFSKKCA--KLIV 156 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~---~~--~vd~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~ 156 (492)
|++++ +..+.+ +. ++|+|||+|+.... .+.++..+++|+.++.++++.+.+.. .-.+
T Consensus 52 D~~~~-------~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ 124 (222)
T PRK06953 52 DVADP-------ASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGV 124 (222)
T ss_pred cCCCH-------HHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCe
Confidence 99953 333332 22 58999999997521 24567889999999999999887531 2236
Q ss_pred EEEeeece-eecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 157 LVHVSTAF-VWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 157 ~V~vST~~-v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
+|++||.. .++... . ....
T Consensus 125 iv~isS~~~~~~~~~-------~-----------------------------------------------------~~~~ 144 (222)
T PRK06953 125 LAVLSSRMGSIGDAT-------G-----------------------------------------------------TTGW 144 (222)
T ss_pred EEEEcCccccccccc-------C-----------------------------------------------------CCcc
Confidence 88888753 232210 0 1123
Q ss_pred hHHHHHHHHHHHHHHh---cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehh
Q 037479 236 TYVFTKVMGEMFIEHL---KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPAD 312 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~---~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vd 312 (492)
.|+.+|+..+.+++.+ ..+++++.++|+.|..+... + ...+..+
T Consensus 145 ~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------------------------~----~~~~~~~ 191 (222)
T PRK06953 145 LYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG-----------------------------A----QAALDPA 191 (222)
T ss_pred ccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC-----------------------------C----CCCCCHH
Confidence 6999999999998866 24789999999987664321 0 0135678
Q ss_pred hhhhHHHHHHHhhhcCCCCCCcEEEecC
Q 037479 313 MVVNAIVVAVVAHAKQPSDVNNIYQVGS 340 (492)
Q Consensus 313 dva~~ii~~~~~~~~~~~~~~~iy~i~~ 340 (492)
+++..++.++....... . +..|+..+
T Consensus 192 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~ 217 (222)
T PRK06953 192 QSVAGMRRVIAQATRRD-N-GRFFQYDG 217 (222)
T ss_pred HHHHHHHHHHHhcCccc-C-ceEEeeCC
Confidence 88888888876543222 1 56666544
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.6e-13 Score=130.58 Aligned_cols=225 Identities=16% Similarity=0.156 Sum_probs=139.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|++ |+++.|+... .+.+. ++. ..++.+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 56 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGAR---VAVLERSAEK---LASLR-------------QRF--------GDHVLV 56 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHH-------------HHh--------CCcceE
Confidence 56899999999999999999999999974 5788886422 11111 111 246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-----c---h----hHHHHHHHhHHHHHHHHHHHHh
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-----D---E----RYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-----~---~----~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
+.+|++++ +..+.++ .++|++||+||.... + + .++..+++|+.|+..+++.+..
T Consensus 57 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (263)
T PRK06200 57 VEGDVTSY-------ADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP 129 (263)
T ss_pred EEccCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence 99999953 3332332 368999999996431 1 1 1556788999999999888765
Q ss_pred cc--cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 151 CA--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 151 ~~--~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
.. .-.++|++||...+...
T Consensus 130 ~~~~~~g~iv~~sS~~~~~~~----------------------------------------------------------- 150 (263)
T PRK06200 130 ALKASGGSMIFTLSNSSFYPG----------------------------------------------------------- 150 (263)
T ss_pred HHHhcCCEEEEECChhhcCCC-----------------------------------------------------------
Confidence 31 12479999986544221
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCcccc--CcCchHHHHHhccCceeeEEecCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAE--GIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~--~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..+.+++.+ .+++.+..+.|+.|..+...+...... ...........+.. .
T Consensus 151 ---~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 218 (263)
T PRK06200 151 ---GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAA---------I 218 (263)
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhc---------C
Confidence 12347999999999888765 346999999999987654321100000 00000000000000 0
Q ss_pred CcccceeehhhhhhHHHHHHHhh-hcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAH-AKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~-~~~~~~~~~iy~i~~~ 341 (492)
....-+...+|++++++.++... .... . +.++.+.++
T Consensus 219 ~p~~r~~~~~eva~~~~fl~s~~~~~~i-t-G~~i~vdgG 256 (263)
T PRK06200 219 TPLQFAPQPEDHTGPYVLLASRRNSRAL-T-GVVINADGG 256 (263)
T ss_pred CCCCCCCCHHHHhhhhhheecccccCcc-c-ceEEEEcCc
Confidence 01123566799999998887633 2211 1 667777655
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-13 Score=121.21 Aligned_cols=252 Identities=18% Similarity=0.182 Sum_probs=166.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+..+||||||-|.+|..++..|... +.-..|++-.--+...+ ++ +.=-++
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~-yGs~~VILSDI~KPp~~--------V~---------------------~~GPyI 92 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYM-YGSECVILSDIVKPPAN--------VT---------------------DVGPYI 92 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHH-hCCccEehhhccCCchh--------hc---------------------ccCCch
Confidence 4468999999999999988755433 33233333221121111 11 222345
Q ss_pred ecCCCCCCCCCCchhhHHHhc--cCccEEEEcccccCc--chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 91 PGDITREDLGVKDSNLREEMW--NKLDVVINLAATTNF--DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~--~~vd~Vih~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
..|+. |...+++++ ..+|-.||..|..+. +.+...+.++|+.|..|+++.|++. +++ +..-||.+++
T Consensus 93 y~DIL-------D~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~-iFVPSTIGAF 163 (366)
T KOG2774|consen 93 YLDIL-------DQKSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLK-VFVPSTIGAF 163 (366)
T ss_pred hhhhh-------ccccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-Cee-Eeeccccccc
Confidence 66776 333333443 379999999886542 2344567899999999999999998 665 4457999999
Q ss_pred cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 167 GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 167 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
|..... .+. +.+ .+..+...|+.||.-||-
T Consensus 164 GPtSPR---NPT---------Pdl--------------------------------------tIQRPRTIYGVSKVHAEL 193 (366)
T KOG2774|consen 164 GPTSPR---NPT---------PDL--------------------------------------TIQRPRTIYGVSKVHAEL 193 (366)
T ss_pred CCCCCC---CCC---------CCe--------------------------------------eeecCceeechhHHHHHH
Confidence 875411 011 110 012577899999999998
Q ss_pred HHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 247 FIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 247 ~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
+-..+ +.++....+|.+.+.+... |-.|-.+ +...-+-....+|+. ..+-.++....+.+..||-.+++..+..
T Consensus 194 ~GEy~~hrFg~dfr~~rfPg~is~~~-pgggttd--ya~A~f~~Al~~gk~-tCylrpdtrlpmmy~~dc~~~~~~~~~a 269 (366)
T KOG2774|consen 194 LGEYFNHRFGVDFRSMRFPGIISATK-PGGGTTD--YAIAIFYDALQKGKH-TCYLRPDTRLPMMYDTDCMASVIQLLAA 269 (366)
T ss_pred HHHHHHhhcCccceecccCcccccCC-CCCCcch--hHHHHHHHHHHcCCc-ccccCCCccCceeehHHHHHHHHHHHhC
Confidence 77655 5688999999888877544 2223222 233333333445544 5677788999999999999999988875
Q ss_pred hhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 325 HAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
+.+..+ .++||+++ -.+|-+|+++.+.+...
T Consensus 270 ~~~~lk--rr~ynvt~---~sftpee~~~~~~~~~p 300 (366)
T KOG2774|consen 270 DSQSLK--RRTYNVTG---FSFTPEEIADAIRRVMP 300 (366)
T ss_pred CHHHhh--hheeeece---eccCHHHHHHHHHhhCC
Confidence 444333 68999998 67999999998887654
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.2e-12 Score=123.95 Aligned_cols=224 Identities=16% Similarity=0.145 Sum_probs=140.7
Q ss_pred hhcCCCEEEEeCCcc-hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 8 EFLENKTILVTGATG-FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 8 ~~~~~~~vlITGatG-flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
..+++++++||||+| -||+.+++.|++.|++ |++..|.... .+... +.+++..+ ..+
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~---V~~~~~~~~~---~~~~~---------~~~~~~~~-------~~~ 70 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGAR---VVISDIHERR---LGETA---------DELAAELG-------LGR 70 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHH---------HHHHHhcC-------Cce
Confidence 356789999999998 5999999999999974 5776665322 11111 11111111 146
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA 152 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (492)
+..+.+|+++ .+..+.++ ..+|+|||+||.... .+.+...+++|+.|+..+++.+....
T Consensus 71 ~~~~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 143 (262)
T PRK07831 71 VEAVVCDVTS-------EAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYM 143 (262)
T ss_pred EEEEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 7889999994 33333333 368999999996421 14567788999999999888775421
Q ss_pred ---c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 153 ---K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 153 ---~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
+ -.++|++||.......
T Consensus 144 ~~~~~~g~iv~~ss~~~~~~~----------------------------------------------------------- 164 (262)
T PRK07831 144 RARGHGGVIVNNASVLGWRAQ----------------------------------------------------------- 164 (262)
T ss_pred HhcCCCcEEEEeCchhhcCCC-----------------------------------------------------------
Confidence 1 3468888774322110
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..|.+++.+ ..++++.+++|+.+..+..... . .......+... .
T Consensus 165 ---~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~-------~-~~~~~~~~~~~-~-------- 224 (262)
T PRK07831 165 ---HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV-------T-SAELLDELAAR-E-------- 224 (262)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc-------c-CHHHHHHHHhc-C--------
Confidence 12357999999999998765 3589999999999887643110 0 11111111110 0
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...-+...+|++++++.++......- . |+++.+.++
T Consensus 225 ~~~r~~~p~~va~~~~~l~s~~~~~i-t-G~~i~v~~~ 260 (262)
T PRK07831 225 AFGRAAEPWEVANVIAFLASDYSSYL-T-GEVVSVSSQ 260 (262)
T ss_pred CCCCCcCHHHHHHHHHHHcCchhcCc-C-CceEEeCCC
Confidence 01135567899999998876432221 1 666666553
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.6e-12 Score=120.47 Aligned_cols=202 Identities=19% Similarity=0.231 Sum_probs=136.9
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++++++|||||+.||..++++|.++|++ ++++.|+++. .+.+.+ .|+.+. .-.+.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~---liLvaR~~~k---L~~la~---------~l~~~~--------~v~v~ 59 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYN---LILVARREDK---LEALAK---------ELEDKT--------GVEVE 59 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCcHHH---HHHHHH---------HHHHhh--------CceEE
Confidence 467899999999999999999999999974 5899998543 222221 222221 25678
Q ss_pred EEecCCCCCCCCCCchhhHHHhc----c---CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 89 LVPGDITREDLGVKDSNLREEMW----N---KLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~----~---~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
++..|+++++ ..+.+. + .+|++||+||...+. +.....+++|+.++..+..+.....
T Consensus 60 vi~~DLs~~~-------~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~ 132 (265)
T COG0300 60 VIPADLSDPE-------ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVE 132 (265)
T ss_pred EEECcCCChh-------HHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999653 232332 2 599999999987653 4567889999999888877654321
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-..+|.++|...+-..
T Consensus 133 ~~~G~IiNI~S~ag~~p~-------------------------------------------------------------- 150 (265)
T COG0300 133 RGAGHIINIGSAAGLIPT-------------------------------------------------------------- 150 (265)
T ss_pred cCCceEEEEechhhcCCC--------------------------------------------------------------
Confidence 23479999996554321
Q ss_pred CCCchHHHHHHHHHHH----HHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMF----IEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~----v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
+....|+.||+..-.+ -.+. ..|+.++.+-|+.+.....+. +. .. .. ......
T Consensus 151 p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-----~~-~~-----------~~-----~~~~~~ 208 (265)
T COG0300 151 PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-----KG-SD-----------VY-----LLSPGE 208 (265)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-----cc-cc-----------cc-----cccchh
Confidence 3457899999865433 3344 468999999999887655421 00 00 00 001122
Q ss_pred ceeehhhhhhHHHHHHHh
Q 037479 307 DVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~ 324 (492)
-+...++||+..+.++.+
T Consensus 209 ~~~~~~~va~~~~~~l~~ 226 (265)
T COG0300 209 LVLSPEDVAEAALKALEK 226 (265)
T ss_pred hccCHHHHHHHHHHHHhc
Confidence 467889999999999874
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.8e-12 Score=115.31 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=138.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.++|.++|||||+.+|...++.|.+.|+ +|.+..|+. +||++ |..+.+ ..++.+
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~---~vvl~aRR~------drL~~----------la~~~~-------~~~~~~ 57 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGA---KVVLAARRE------ERLEA----------LADEIG-------AGAALA 57 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCC---eEEEEeccH------HHHHH----------HHHhhc-------cCceEE
Confidence 4579999999999999999999999996 568888874 34431 222221 146888
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcc---cceeEEE
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCA---KLIVLVH 159 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~~~V~ 159 (492)
+..|++++.--...-.....-+.++|++||.||..... +.|+.++++|+.|..+..++..... +--.+|.
T Consensus 58 ~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN 137 (246)
T COG4221 58 LALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIIN 137 (246)
T ss_pred EeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEE
Confidence 99999953200000011122334799999999976432 5689999999999999988764321 2337899
Q ss_pred eeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 160 VSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 160 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
+||.. |.. +| ...+.|+.
T Consensus 138 ~~SiA--G~~-------~y-----------------------------------------------------~~~~vY~A 155 (246)
T COG4221 138 LGSIA--GRY-------PY-----------------------------------------------------PGGAVYGA 155 (246)
T ss_pred ecccc--ccc-------cC-----------------------------------------------------CCCccchh
Confidence 98843 221 12 34578999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhh
Q 037479 240 TKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 240 sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddv 314 (492)
||+...++.... ..+++++.+-|+.|....-.-++ + .+-..-..... .....+..+|+
T Consensus 156 TK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~---~--~g~~~~~~~~y------------~~~~~l~p~dI 218 (246)
T COG4221 156 TKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVR---F--EGDDERADKVY------------KGGTALTPEDI 218 (246)
T ss_pred hHHHHHHHHHHHHHHhcCCCeeEEEecCceecceeccccc---C--CchhhhHHHHh------------ccCCCCCHHHH
Confidence 999887776544 46899999999998654321111 0 00000011110 12256889999
Q ss_pred hhHHHHHHHhhh
Q 037479 315 VNAIVVAVVAHA 326 (492)
Q Consensus 315 a~~ii~~~~~~~ 326 (492)
|+++..++..+.
T Consensus 219 A~~V~~~~~~P~ 230 (246)
T COG4221 219 AEAVLFAATQPQ 230 (246)
T ss_pred HHHHHHHHhCCC
Confidence 999999998543
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.3e-13 Score=128.00 Aligned_cols=161 Identities=14% Similarity=0.187 Sum_probs=109.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+||||||+||+.++++|++.|+ +|+++.|.... ++. ++ .+. ...+++++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~---~V~~~~r~~~~-----~~~-~~---------~~~--------~~~~~~~~~~ 55 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT---HVISISRTENK-----ELT-KL---------AEQ--------YNSNLTFHSL 55 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC---EEEEEeCCchH-----HHH-HH---------Hhc--------cCCceEEEEe
Confidence 6899999999999999999999996 45788886421 111 11 000 1256888999
Q ss_pred CCCCCCCCCCchhhHHHhccCc-----------cEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--
Q 037479 93 DITREDLGVKDSNLREEMWNKL-----------DVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC-- 151 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~v-----------d~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (492)
|+++ .+..+.+++++ .++||+||.... .+.+...+++|+.|+..+++.+...
T Consensus 56 D~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 128 (251)
T PRK06924 56 DLQD-------VHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTK 128 (251)
T ss_pred cCCC-------HHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHh
Confidence 9995 33333444321 279999987532 1446677889999977766655432
Q ss_pred --ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 152 --AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 152 --~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
++..+||++||..+... +
T Consensus 129 ~~~~~~~iv~~sS~~~~~~---------~--------------------------------------------------- 148 (251)
T PRK06924 129 DWKVDKRVINISSGAAKNP---------Y--------------------------------------------------- 148 (251)
T ss_pred ccCCCceEEEecchhhcCC---------C---------------------------------------------------
Confidence 22357999999643211 1
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecC
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGT 268 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~ 268 (492)
.....|+.+|+..|.+++.+ ..++.+..++|+.|-.+
T Consensus 149 --~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 149 --FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred --CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 23458999999999988754 13689999999987654
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.4e-12 Score=120.58 Aligned_cols=207 Identities=17% Similarity=0.245 Sum_probs=132.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+||||||+||++++++|++.|+.+ .+....|..... . ...++.++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~~~-----~------------------------~~~~~~~~~~ 50 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHKPD-----F------------------------QHDNVQWHAL 50 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCccc-----c------------------------ccCceEEEEe
Confidence 589999999999999999999987655 455555543211 0 0256788999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-------------hhHHHHHHHhHHHHHHHHHHHHhcc---ccee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-------------ERYDVALDLNTFGAKHVLNFSKKCA---KLIV 156 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-------------~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~~ 156 (492)
|+++++ ..+.....++++|+|||+||..... +.+...+.+|+.++..+.+.+.... +..+
T Consensus 51 Dls~~~----~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~ 126 (235)
T PRK09009 51 DVTDEA----EIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAK 126 (235)
T ss_pred cCCCHH----HHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCce
Confidence 999532 1111123345899999999976310 2355778999999998888776531 2347
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
++++||.. +.. .+... .....
T Consensus 127 i~~iss~~--~~~----~~~~~-----------------------------------------------------~~~~~ 147 (235)
T PRK09009 127 FAVISAKV--GSI----SDNRL-----------------------------------------------------GGWYS 147 (235)
T ss_pred EEEEeecc--ccc----ccCCC-----------------------------------------------------CCcch
Confidence 88888632 211 00001 11247
Q ss_pred HHHHHHHHHHHHHHh----c---CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 237 YVFTKVMGEMFIEHL----K---ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~----~---~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
|+.+|+..+.+.+.. . .++.+..+.|+.|-.+...... . . .....++
T Consensus 148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~-----------------~----~-----~~~~~~~ 201 (235)
T PRK09009 148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ-----------------Q----N-----VPKGKLF 201 (235)
T ss_pred hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh-----------------h----c-----cccCCCC
Confidence 999999999888754 1 4788999999988765432100 0 0 0112357
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGS 340 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~ 340 (492)
..+++|++++.++........ +..+.+.+
T Consensus 202 ~~~~~a~~~~~l~~~~~~~~~--g~~~~~~g 230 (235)
T PRK09009 202 TPEYVAQCLLGIIANATPAQS--GSFLAYDG 230 (235)
T ss_pred CHHHHHHHHHHHHHcCChhhC--CcEEeeCC
Confidence 889999999998875422211 55555444
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-12 Score=119.21 Aligned_cols=183 Identities=22% Similarity=0.302 Sum_probs=124.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++||||+|.||++++++|.+. . +|+++.|+.. .+.+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~---~vi~~~r~~~--------------------------------------~~~~ 38 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H---EVITAGRSSG--------------------------------------DVQV 38 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C---cEEEEecCCC--------------------------------------ceEe
Confidence 58999999999999999999986 3 5677777531 2567
Q ss_pred CCCCCCCCCCchhhHHHhc---cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-ccceeEEEee
Q 037479 93 DITREDLGVKDSNLREEMW---NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-AKLIVLVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~---~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~V~vS 161 (492)
|+++ .+..+.++ .++|+|||+||...+ .+.+...+++|+.|+.++++++... .+..+|+++|
T Consensus 39 D~~~-------~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 39 DITD-------PASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred cCCC-------hHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 8884 33333443 379999999996432 2456778899999999999988653 2234788888
Q ss_pred eceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHH
Q 037479 162 TAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241 (492)
Q Consensus 162 T~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK 241 (492)
|....... .....|+.||
T Consensus 112 s~~~~~~~--------------------------------------------------------------~~~~~Y~~sK 129 (199)
T PRK07578 112 GILSDEPI--------------------------------------------------------------PGGASAATVN 129 (199)
T ss_pred ccccCCCC--------------------------------------------------------------CCchHHHHHH
Confidence 75432110 1235799999
Q ss_pred HHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhH
Q 037479 242 VMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNA 317 (492)
Q Consensus 242 ~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ 317 (492)
+..+.+.+.. ..++.+..+.|+.|-.+... . +. .+++ ...++.+|+|+.
T Consensus 130 ~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~--------------~------~~--~~~~-----~~~~~~~~~a~~ 182 (199)
T PRK07578 130 GALEGFVKAAALELPRGIRINVVSPTVLTESLEK--------------Y------GP--FFPG-----FEPVPAARVALA 182 (199)
T ss_pred HHHHHHHHHHHHHccCCeEEEEEcCCcccCchhh--------------h------hh--cCCC-----CCCCCHHHHHHH
Confidence 9888877654 35799999999876432110 0 00 0111 235899999999
Q ss_pred HHHHHHhhhcCCCCCCcEEEe
Q 037479 318 IVVAVVAHAKQPSDVNNIYQV 338 (492)
Q Consensus 318 ii~~~~~~~~~~~~~~~iy~i 338 (492)
++.++.... . ++++++
T Consensus 183 ~~~~~~~~~----~-g~~~~~ 198 (199)
T PRK07578 183 YVRSVEGAQ----T-GEVYKV 198 (199)
T ss_pred HHHHhccce----e-eEEecc
Confidence 988886321 1 677765
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.7e-13 Score=140.04 Aligned_cols=220 Identities=17% Similarity=0.168 Sum_probs=144.3
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
...+|+++||||+|.||..++++|++.|. +|+++.|+... .+.+. ++. ..++.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~ 318 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGD---RLLIIDRDAEG---AKKLA-------------EAL--------GDEHL 318 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHh--------CCcee
Confidence 34789999999999999999999999996 55788775321 11111 111 24567
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
.+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+....
T Consensus 319 ~~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 391 (520)
T PRK06484 319 SVQADITD-------EAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS 391 (520)
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 78999995 33333333 358999999997521 13567889999999999999887632
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||....... .
T Consensus 392 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 409 (520)
T PRK06484 392 QGGVIVNLGSIASLLAL--------------------------------------------------------------P 409 (520)
T ss_pred cCCEEEEECchhhcCCC--------------------------------------------------------------C
Confidence 23589999996544221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+++.. ..++++..+.|+.|.++...... .. . ......+.+ ..+ ...
T Consensus 410 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~--~-~~~~~~~~~----~~~-----~~~ 474 (520)
T PRK06484 410 PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALK---AS--G-RADFDSIRR----RIP-----LGR 474 (520)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhc---cc--c-HHHHHHHHh----cCC-----CCC
Confidence 2357999999999888765 34799999999998776432110 00 0 000111111 000 112
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++....... . ++++.+.++
T Consensus 475 ~~~~~dia~~~~~l~s~~~~~~-~-G~~i~vdgg 506 (520)
T PRK06484 475 LGDPEEVAEAIAFLASPAASYV-N-GATLTVDGG 506 (520)
T ss_pred CcCHHHHHHHHHHHhCccccCc-c-CcEEEECCC
Confidence 4678999999998876332222 2 778888776
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.1e-13 Score=127.14 Aligned_cols=213 Identities=12% Similarity=0.059 Sum_probs=132.6
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|+||||||+||+++++.|++.|. +|+++.|+.... .+.+. ..+++. ..++.++.+|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~---~v~~~~~~~~~~--~~~~~---------~~l~~~---------~~~~~~~~~Dl 57 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF---EICVHYHSGRSD--AESVV---------SAIQAQ---------GGNARLLQFDV 57 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCCHHH--HHHHH---------HHHHHc---------CCeEEEEEccC
Confidence 68999999999999999999996 457777753221 11111 111111 25688999999
Q ss_pred CCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH-hc---cccee
Q 037479 95 TREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK-KC---AKLIV 156 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~-~~---~~~~~ 156 (492)
++ .+..+.++ ..+|++||+||.... .+.+...+++|+.|+.++++.+. .+ .+..+
T Consensus 58 ~~-------~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 130 (239)
T TIGR01831 58 AD-------RVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGR 130 (239)
T ss_pred CC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeE
Confidence 95 33333332 357999999986431 24567889999999999988652 11 13458
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
||++||....... .....
T Consensus 131 iv~vsS~~~~~~~--------------------------------------------------------------~~~~~ 148 (239)
T TIGR01831 131 IITLASVSGVMGN--------------------------------------------------------------RGQVN 148 (239)
T ss_pred EEEEcchhhccCC--------------------------------------------------------------CCCcc
Confidence 9999985432111 12346
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
|+.+|+..+.+.+.. ..+++++.++|+.|.++.....+.+ ...... .. + ..-+...
T Consensus 149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~-~~---~-----~~~~~~~ 209 (239)
T TIGR01831 149 YSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD----------LDEALK-TV---P-----MNRMGQP 209 (239)
T ss_pred hHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH----------HHHHHh-cC---C-----CCCCCCH
Confidence 999999877766544 3589999999999877654222111 101100 00 0 1124467
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGS 340 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~ 340 (492)
+|++++++.++........ +.+..+.+
T Consensus 210 ~~va~~~~~l~~~~~~~~~--g~~~~~~g 236 (239)
T TIGR01831 210 AEVASLAGFLMSDGASYVT--RQVISVNG 236 (239)
T ss_pred HHHHHHHHHHcCchhcCcc--CCEEEecC
Confidence 9999999998864332211 45555544
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.9e-12 Score=123.19 Aligned_cols=220 Identities=15% Similarity=0.159 Sum_probs=137.1
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC------CcCHHHHHHHHhhcChhhHHHHHhcCCchhhh
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD------AKSATVRFHNEIIGKDLFRVLKEKNGTHLNAL 82 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~------~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~ 82 (492)
.+++|+++||||+|.||..++++|++.|. +|+++.|+.. .....+.+.++ ++..
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~---~vii~~~~~~~~~~~~~~~~~~~~~~~---------l~~~-------- 62 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSASGGSAAQAVVDE---------IVAA-------- 62 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEeeCCccccccccchhHHHHHHHH---------HHhc--------
Confidence 46799999999999999999999999996 4466666531 11111121111 1110
Q ss_pred ccCceEEEecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH
Q 037479 83 ISEKITLVPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a 148 (492)
..++..+.+|++++ +....+ ...+|++||+||.... .+.+...+++|+.|+..+++++
T Consensus 63 -~~~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 134 (286)
T PRK07791 63 -GGEAVANGDDIADW-------DGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHA 134 (286)
T ss_pred -CCceEEEeCCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHH
Confidence 24577899999953 333222 2468999999997532 1457888999999999988877
Q ss_pred Hhcc---c------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHH
Q 037479 149 KKCA---K------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLA 219 (492)
Q Consensus 149 ~~~~---~------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (492)
.... . -.++|++||.......
T Consensus 135 ~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-------------------------------------------------- 164 (286)
T PRK07791 135 AAYWRAESKAGRAVDARIINTSSGAGLQGS-------------------------------------------------- 164 (286)
T ss_pred HHHHHHhcccCCCCCcEEEEeCchhhCcCC--------------------------------------------------
Confidence 5321 0 1379999985432111
Q ss_pred HhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCce
Q 037479 220 MKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGR 294 (492)
Q Consensus 220 ~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~ 294 (492)
.....|+.||+..+.+.+.. ..++++..|.|+ +..+... ........ .
T Consensus 165 ------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~-------------~~~~~~~~-~ 217 (286)
T PRK07791 165 ------------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE-------------TVFAEMMA-K 217 (286)
T ss_pred ------------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch-------------hhHHHHHh-c
Confidence 12357999999988887654 358999999997 3221110 00000000 0
Q ss_pred eeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 295 LTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 295 ~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
. +.........+|+|++++.++........ ++++.+.++
T Consensus 218 ~------~~~~~~~~~pedva~~~~~L~s~~~~~it--G~~i~vdgG 256 (286)
T PRK07791 218 P------EEGEFDAMAPENVSPLVVWLGSAESRDVT--GKVFEVEGG 256 (286)
T ss_pred C------cccccCCCCHHHHHHHHHHHhCchhcCCC--CcEEEEcCC
Confidence 0 01111345689999999988764322221 777888776
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.6e-12 Score=115.19 Aligned_cols=164 Identities=17% Similarity=0.167 Sum_probs=114.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++++||||||++|.+++++|++.|. ..|+++.|+.......... +..+++. ..++..+.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~--~~v~~~~r~~~~~~~~~~~---------~~~~~~~---------~~~~~~~~~ 60 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA--RHLVLLSRSGPDAPGAAEL---------LAELEAL---------GAEVTVVAC 60 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC--CeEEEEeCCCCCCccHHHH---------HHHHHhc---------CCeEEEEEC
Confidence 5799999999999999999999885 2457777765432211100 1111111 246788999
Q ss_pred CCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 93 DITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
|+++ .+..+.++ ..+|+|||+|+..... +.++..+++|+.|+.++++++++. +.+++|
T Consensus 61 D~~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii 132 (180)
T smart00822 61 DVAD-------RAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFV 132 (180)
T ss_pred CCCC-------HHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEE
Confidence 9984 33333332 3479999999965321 456778999999999999999775 667899
Q ss_pred EeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHH
Q 037479 159 HVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238 (492)
Q Consensus 159 ~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~ 238 (492)
++||....-.. .....|+
T Consensus 133 ~~ss~~~~~~~--------------------------------------------------------------~~~~~y~ 150 (180)
T smart00822 133 LFSSVAGVLGN--------------------------------------------------------------PGQANYA 150 (180)
T ss_pred EEccHHHhcCC--------------------------------------------------------------CCchhhH
Confidence 99885432111 1235799
Q ss_pred HHHHHHHHHHHHh-cCCCcEEEEeCCcee
Q 037479 239 FTKVMGEMFIEHL-KENMSVAIVRPTIIT 266 (492)
Q Consensus 239 ~sK~~aE~~v~~~-~~~~~~~ivRPs~v~ 266 (492)
.+|...+.++... ..+++++.+.|+.+-
T Consensus 151 ~sk~~~~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 151 AANAFLDALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence 9999999998765 568999999987654
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=125.68 Aligned_cols=229 Identities=11% Similarity=0.080 Sum_probs=140.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|.||++++++|++.|+ +|+++.|+... .+.+.++ +++. ...++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~--------~~~~~~~ 62 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGA---DVILLSRNEEN---LKKAREK---------IKSE--------SNVDVSY 62 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhh--------cCCceEE
Confidence 5789999999999999999999999996 45788886432 1111111 1111 0246889
Q ss_pred EecCCCCCCCCCCchhhHHHhc------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|...+.+.+... .+
T Consensus 63 ~~~Dv~~-------~~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~ 135 (263)
T PRK08339 63 IVADLTK-------REDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG 135 (263)
T ss_pred EEecCCC-------HHHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 9999995 33333443 358999999996432 2567888999999877776655432 13
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||....... ..
T Consensus 136 ~g~Ii~isS~~~~~~~--------------------------------------------------------------~~ 153 (263)
T PRK08339 136 FGRIIYSTSVAIKEPI--------------------------------------------------------------PN 153 (263)
T ss_pred CCEEEEEcCccccCCC--------------------------------------------------------------Cc
Confidence 4589999997543211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-CccccCc-CchHHHHHhccCceeeEEecCCCccc
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-PGWAEGI-RTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~gw~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
...|+.+|+..+.+.+.. ..|+++..+.|+.|-.+..... ....... .........+.. ..+ ..
T Consensus 154 ~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p-----~~ 224 (263)
T PRK08339 154 IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAK----PIP-----LG 224 (263)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhc----cCC-----cc
Confidence 346899999888877654 4589999999998865432100 0000000 000111111111 011 11
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|+++..++........ +.++.+.++
T Consensus 225 r~~~p~dva~~v~fL~s~~~~~it--G~~~~vdgG 257 (263)
T PRK08339 225 RLGEPEEIGYLVAFLASDLGSYIN--GAMIPVDGG 257 (263)
T ss_pred cCcCHHHHHHHHHHHhcchhcCcc--CceEEECCC
Confidence 356689999999888764332221 677777766
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.7e-12 Score=121.89 Aligned_cols=107 Identities=18% Similarity=0.169 Sum_probs=79.3
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+-+++++++||||+|+||++++++|++.|. +|+++.|++... .. .. . ....
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~---~Vi~~~r~~~~~-----~~-~~----------~----------~~~~ 60 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGA---KVIGLTHSKINN-----SE-SN----------D----------ESPN 60 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEECCchhh-----hh-hh----------c----------cCCC
Confidence 457889999999999999999999999996 457778765211 00 00 0 0112
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHh
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF----DERYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
..+.+|++ +.+..+..+.++|++||+||.... .+.+...+++|+.|+.++++.+..
T Consensus 61 ~~~~~D~~-------~~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 61 EWIKWECG-------KEESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred eEEEeeCC-------CHHHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 56789998 444455677889999999996432 245778899999999999998765
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=126.07 Aligned_cols=224 Identities=13% Similarity=0.105 Sum_probs=132.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++++||||+|+||++++++|++.|.+ |+++.|+.... .+.+.+ .+.... ..++..+.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~---V~~~~~~~~~~--~~~~~~---------~l~~~~--------~~~~~~~~~ 59 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYR---VVLHYHRSAAA--ASTLAA---------ELNARR--------PNSAVTCQA 59 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCe---EEEEcCCcHHH--HHHHHH---------HHHhcc--------CCceEEEEc
Confidence 58999999999999999999999974 46766643211 111111 111111 135667899
Q ss_pred CCCCCCCCCCc-hhhHHH---hccCccEEEEcccccCc------c------------hhHHHHHHHhHHHHHHHHHHHHh
Q 037479 93 DITREDLGVKD-SNLREE---MWNKLDVVINLAATTNF------D------------ERYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 93 Dl~~~~lgl~~-~~~~~~---~~~~vd~Vih~Aa~~~~------~------------~~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
|+++++-.... .+..+. ...++|+|||+||.... + ..+...+++|+.++..+.+.+..
T Consensus 60 Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (267)
T TIGR02685 60 DLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ 139 (267)
T ss_pred cCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 99964311000 111111 12469999999996421 1 12567799999999999887653
Q ss_pred ccc---------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHh
Q 037479 151 CAK---------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMK 221 (492)
Q Consensus 151 ~~~---------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (492)
... -..+|.+||......
T Consensus 140 ~~~~~~~~~~~~~~~iv~~~s~~~~~~----------------------------------------------------- 166 (267)
T TIGR02685 140 RQAGTRAEQRSTNLSIVNLCDAMTDQP----------------------------------------------------- 166 (267)
T ss_pred HhhhcccccCCCCeEEEEehhhhccCC-----------------------------------------------------
Confidence 211 124555555322100
Q ss_pred hhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceee
Q 037479 222 DLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLT 296 (492)
Q Consensus 222 ~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~ 296 (492)
....+.|+.||+..|.+++.+ ..|++++.|+|+.+..+...+ . .....+.. ..
T Consensus 167 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~--------~---~~~~~~~~-~~- 224 (267)
T TIGR02685 167 ---------LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP--------F---EVQEDYRR-KV- 224 (267)
T ss_pred ---------CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc--------h---hHHHHHHH-hC-
Confidence 023468999999999998865 358999999999886442211 0 01111110 00
Q ss_pred EEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 297 CFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 297 ~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+. .......++++++++.++....... . +..+.+.++
T Consensus 225 --~~----~~~~~~~~~va~~~~~l~~~~~~~~-~-G~~~~v~gg 261 (267)
T TIGR02685 225 --PL----GQREASAEQIADVVIFLVSPKAKYI-T-GTCIKVDGG 261 (267)
T ss_pred --CC----CcCCCCHHHHHHHHHHHhCcccCCc-c-cceEEECCc
Confidence 00 0124578999999999886432222 1 677777665
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=124.94 Aligned_cols=218 Identities=15% Similarity=0.106 Sum_probs=138.6
Q ss_pred cCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++||||+ +-||+.++++|++.|. +|++..|+.+ ..+.+. ++ ...++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~---~Vi~~~r~~~---~~~~~~-~~--------------------~~~~~ 57 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGA---TVIYTYQNDR---MKKSLQ-KL--------------------VDEED 57 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCC---EEEEecCchH---HHHHHH-hh--------------------ccCce
Confidence 578999999999 7999999999999996 4577777521 111111 11 01457
Q ss_pred EEEecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
..+++|++++ +..+.+ ..++|++||+||.... .+.++..+++|+.|+..+++.+.
T Consensus 58 ~~~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~ 130 (252)
T PRK06079 58 LLVECDVASD-------ESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYAR 130 (252)
T ss_pred eEEeCCCCCH-------HHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHH
Confidence 7899999953 323222 2468999999996431 14567889999999999988876
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... +-.++|++||.......
T Consensus 131 ~~~~~~g~Iv~iss~~~~~~~----------------------------------------------------------- 151 (252)
T PRK06079 131 PLLNPGASIVTLTYFGSERAI----------------------------------------------------------- 151 (252)
T ss_pred HhcccCceEEEEeccCccccC-----------------------------------------------------------
Confidence 532 22478888874322110
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..|+.+..|.|+.|-.+.... + .........+.. . .+
T Consensus 152 ---~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~---~----~~~~~~~~~~~~-~---~p---- 213 (252)
T PRK06079 152 ---PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG---I----KGHKDLLKESDS-R---TV---- 213 (252)
T ss_pred ---CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc---C----CChHHHHHHHHh-c---Cc----
Confidence 12357999999999888754 358999999999986653211 1 011111111111 1 11
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+...+|+|+++..++........ +.+..+.++
T Consensus 214 -~~r~~~pedva~~~~~l~s~~~~~it--G~~i~vdgg 248 (252)
T PRK06079 214 -DGVGVTIEEVGNTAAFLLSDLSTGVT--GDIIYVDKG 248 (252)
T ss_pred -ccCCCCHHHHHHHHHHHhCccccccc--ccEEEeCCc
Confidence 11356789999999988864322221 666666554
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-12 Score=124.24 Aligned_cols=222 Identities=14% Similarity=0.122 Sum_probs=134.8
Q ss_pred cCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcC-----HHHHHHHHhhcChhhHHHHHhcCCchhhh
Q 037479 10 LENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKS-----ATVRFHNEIIGKDLFRVLKEKNGTHLNAL 82 (492)
Q Consensus 10 ~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~-----~~~r~~~~~~~~~~f~~l~~~~~~~~~~~ 82 (492)
+++|+|+|||||| .||++++++|++.|.. |++..|...... ..+.+. + .-+.+++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~---vi~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~--------- 65 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGAD---IFFTYWTAYDKEMPWGVDQDEQI-Q-----LQEELLK--------- 65 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCe---EEEEecccccccccccccHHHHH-H-----HHHHHHh---------
Confidence 5789999999995 7999999999999964 455543321100 001100 0 0011111
Q ss_pred ccCceEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHH
Q 037479 83 ISEKITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a 148 (492)
...++.++.+|++++ +..+.++ ..+|+|||+||..... +.++..+++|+.|...+.+.+
T Consensus 66 ~g~~~~~~~~D~~~~-------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 138 (256)
T PRK12859 66 NGVKVSSMELDLTQN-------DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQF 138 (256)
T ss_pred cCCeEEEEEcCCCCH-------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 124678899999953 3332332 3589999999975321 346778999999998886544
Q ss_pred Hh-cc--cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhc
Q 037479 149 KK-CA--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGI 225 (492)
Q Consensus 149 ~~-~~--~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (492)
.. +. +-.+||++||.......
T Consensus 139 ~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------------------- 162 (256)
T PRK12859 139 ARGFDKKSGGRIINMTSGQFQGPM-------------------------------------------------------- 162 (256)
T ss_pred HHHHhhcCCeEEEEEcccccCCCC--------------------------------------------------------
Confidence 32 21 23589999996432110
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEec
Q 037479 226 KRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300 (492)
Q Consensus 226 ~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~ 300 (492)
.....|+.||+..+.+.+.. ..+++++.++|+.|-.+... . .+...+. . ..+
T Consensus 163 ------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~---------~---~~~~~~~-~---~~~- 219 (256)
T PRK12859 163 ------VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT---------E---EIKQGLL-P---MFP- 219 (256)
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC---------H---HHHHHHH-h---cCC-
Confidence 23468999999999987765 35799999999987654221 0 1100000 0 000
Q ss_pred CCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 301 ~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+...+|+|++++.++....... . ++++.+.++
T Consensus 220 ----~~~~~~~~d~a~~~~~l~s~~~~~~-~-G~~i~~dgg 254 (256)
T PRK12859 220 ----FGRIGEPKDAARLIKFLASEEAEWI-T-GQIIHSEGG 254 (256)
T ss_pred ----CCCCcCHHHHHHHHHHHhCccccCc-c-CcEEEeCCC
Confidence 1134567999999988775322221 1 666666554
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-12 Score=122.62 Aligned_cols=162 Identities=14% Similarity=0.137 Sum_probs=112.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|+||||||++|++++++|++.|+ +|+++.|+...... +.. ..++.++.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~~~~---~~~-----------------------~~~~~~~~~ 52 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW---QVTATVRGPQQDTA---LQA-----------------------LPGVHIEKL 52 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC---EEEEEeCCCcchHH---HHh-----------------------ccccceEEc
Confidence 6899999999999999999999996 56888887654211 110 135677889
Q ss_pred CCCCCCCCCCchhhHHHhcc-----CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhcc--ccee
Q 037479 93 DITREDLGVKDSNLREEMWN-----KLDVVINLAATTNF---------DERYDVALDLNTFGAKHVLNFSKKCA--KLIV 156 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~-----~vd~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~ 156 (492)
|+++ .+..+.+.+ ++|+|||+||.... .+.+...+++|+.++..+++.+.... +...
T Consensus 53 D~~d-------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 125 (225)
T PRK08177 53 DMND-------PASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGV 125 (225)
T ss_pred CCCC-------HHHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCE
Confidence 9984 333333333 59999999987532 13456778899999999988876532 2246
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
++++||.+ |... .++ ......
T Consensus 126 iv~~ss~~--g~~~-------~~~--------------------------------------------------~~~~~~ 146 (225)
T PRK08177 126 LAFMSSQL--GSVE-------LPD--------------------------------------------------GGEMPL 146 (225)
T ss_pred EEEEccCc--cccc-------cCC--------------------------------------------------CCCccc
Confidence 77777742 2210 000 012346
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
|+.+|+..|.+++.+ ..++.+..++|+.|-.+.
T Consensus 147 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 147 YKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 999999999998765 357999999999886654
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.7e-12 Score=122.33 Aligned_cols=222 Identities=15% Similarity=0.095 Sum_probs=134.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|.||++++++|++.|. +|+++.|+... ..+.+.+ .++.. ..++..
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~---~vvi~~~~~~~--~~~~~~~---------~l~~~---------~~~~~~ 61 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKA---KVVINYRSDEE--EANDVAE---------EIKKA---------GGEAIA 61 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHH---------HHHHc---------CCeEEE
Confidence 5789999999999999999999999996 44666664321 1111111 11110 246778
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (492)
+.+|+++ .+....++ .++|++||+|+.... .+.++..+++|+.++..+++.+ ++.
T Consensus 62 ~~~Dl~~-------~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~ 134 (261)
T PRK08936 62 VKGDVTV-------ESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEH 134 (261)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 33333333 368999999996432 1446678999998887665543 433
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
..-.++|++||.......
T Consensus 135 ~~~g~iv~~sS~~~~~~~-------------------------------------------------------------- 152 (261)
T PRK08936 135 DIKGNIINMSSVHEQIPW-------------------------------------------------------------- 152 (261)
T ss_pred CCCcEEEEEccccccCCC--------------------------------------------------------------
Confidence 123589999985322110
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..+++++.++|+.|..+...... ... .....+.. . .+ ..
T Consensus 153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~------~~~-~~~~~~~~-~---~~-----~~ 216 (261)
T PRK08936 153 PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKF------ADP-KQRADVES-M---IP-----MG 216 (261)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccccc------CCH-HHHHHHHh-c---CC-----CC
Confidence 23457999997666655543 45899999999998776532100 011 11111110 0 01 12
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+...+++++.+..++........ +..+.+.++
T Consensus 217 ~~~~~~~va~~~~~l~s~~~~~~~--G~~i~~d~g 249 (261)
T PRK08936 217 YIGKPEEIAAVAAWLASSEASYVT--GITLFADGG 249 (261)
T ss_pred CCcCHHHHHHHHHHHcCcccCCcc--CcEEEECCC
Confidence 356678999998888764322221 555666554
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-12 Score=124.30 Aligned_cols=166 Identities=22% Similarity=0.257 Sum_probs=111.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++||||||+||..+++.|++.|. +|+++.|+... .+.+.++ ++.. + ...+.++.+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~---~vv~~~r~~~~---~~~~~~~---------~~~~-~-------~~~~~~~~~ 57 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA---ELFLTDRDADG---LAQTVAD---------ARAL-G-------GTVPEHRAL 57 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc-C-------CCcceEEEe
Confidence 5899999999999999999999986 45777775421 1111111 1111 0 123556789
Q ss_pred CCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----ccc
Q 037479 93 DITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC----AKL 154 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~ 154 (492)
|++++ +....++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... +..
T Consensus 58 D~~~~-------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 130 (272)
T PRK07832 58 DISDY-------DAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRG 130 (272)
T ss_pred eCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC
Confidence 99953 3322222 358999999986432 2456788999999999999987531 123
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... ...
T Consensus 131 g~ii~isS~~~~~~~--------------------------------------------------------------~~~ 148 (272)
T PRK07832 131 GHLVNVSSAAGLVAL--------------------------------------------------------------PWH 148 (272)
T ss_pred cEEEEEccccccCCC--------------------------------------------------------------CCC
Confidence 589999986432110 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCC
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~ 270 (492)
..|+.||+..+.+.... ..++++++++|+.+.++..
T Consensus 149 ~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~ 189 (272)
T PRK07832 149 AAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLV 189 (272)
T ss_pred cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence 56999998666665433 4589999999999987654
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3e-12 Score=132.95 Aligned_cols=163 Identities=20% Similarity=0.177 Sum_probs=113.1
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++++++||||+|+||..+++.|.+.|. +|+++.|+..... .+.+. .+ -+..
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga---~vi~~~~~~~~~~-l~~~~-------------~~----------~~~~ 259 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGA---HVVCLDVPAAGEA-LAAVA-------------NR----------VGGT 259 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCccHHH-HHHHH-------------HH----------cCCe
Confidence 35689999999999999999999999986 4577777532211 11111 11 1235
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
.+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++.+.+....
T Consensus 260 ~~~~Dv~~-------~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 332 (450)
T PRK08261 260 ALALDITA-------PDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGAL 332 (450)
T ss_pred EEEEeCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 67889994 33333333 268999999997642 24577889999999999999987631
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.-.+||++||.......
T Consensus 333 ~~~g~iv~~SS~~~~~g~-------------------------------------------------------------- 350 (450)
T PRK08261 333 GDGGRIVGVSSISGIAGN-------------------------------------------------------------- 350 (450)
T ss_pred cCCCEEEEECChhhcCCC--------------------------------------------------------------
Confidence 22579999986443211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceec
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITG 267 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g 267 (492)
.....|+.+|+..+.++..+ ..++++..+.|+.|-.
T Consensus 351 ~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t 391 (450)
T PRK08261 351 RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIET 391 (450)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcc
Confidence 12357999999766666544 3589999999998754
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-12 Score=139.90 Aligned_cols=167 Identities=19% Similarity=0.175 Sum_probs=118.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.++++|||||||+||++++++|.+.|+ +|+++.|+... .+.+.++ ++.. ..++.+
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~---~v~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 368 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGA---EVVASDIDEAA---AERTAEL---------IRAA---------GAVAHA 368 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 5678999999999999999999999997 45888886422 1111111 1110 246788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+..+.+++ .+|++||+||.... .+.+...+++|+.|+.++++++....
T Consensus 369 ~~~Dv~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 441 (582)
T PRK05855 369 YRVDVSD-------ADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVER 441 (582)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999994 443334333 58999999998642 24567889999999999888764321
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ -.++|++||...+...
T Consensus 442 ~~~g~iv~~sS~~~~~~~-------------------------------------------------------------- 459 (582)
T PRK05855 442 GTGGHIVNVASAAAYAPS-------------------------------------------------------------- 459 (582)
T ss_pred CCCcEEEEECChhhccCC--------------------------------------------------------------
Confidence 1 2479999997665432
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
.....|+.||+..+.+.+.. ..|++++++.|+.|-.+.
T Consensus 460 ~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 502 (582)
T PRK05855 460 RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI 502 (582)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence 12357999999888776544 458999999999886643
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.1e-12 Score=121.82 Aligned_cols=220 Identities=15% Similarity=0.100 Sum_probs=137.2
Q ss_pred cCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++||||+ +-||+.++++|++.|. +|++..|+.+.....+.+. ++. ..+
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~---~v~l~~r~~~~~~~~~~~~-------------~~~---------~~~ 62 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGA---ELAVTYLNDKARPYVEPLA-------------EEL---------DAP 62 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCChhhHHHHHHHH-------------Hhh---------ccc
Confidence 578999999998 5899999999999996 4577777643211112211 111 234
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
.++.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+++.+.
T Consensus 63 ~~~~~D~~~~-------~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~ 135 (258)
T PRK07533 63 IFLPLDVREP-------GQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAE 135 (258)
T ss_pred eEEecCcCCH-------HHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 5788999953 3332322 468999999996421 14567889999999999999775
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... .-.++|++||.... . ..
T Consensus 136 p~m~~~g~Ii~iss~~~~--~-------~~-------------------------------------------------- 156 (258)
T PRK07533 136 PLMTNGGSLLTMSYYGAE--K-------VV-------------------------------------------------- 156 (258)
T ss_pred HHhccCCEEEEEeccccc--c-------CC--------------------------------------------------
Confidence 532 12368888874321 1 00
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..++.+..+.|+.|-.+...... ........+.. ..+
T Consensus 157 ---~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~----~~p---- 218 (258)
T PRK07533 157 ---ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGID-------DFDALLEDAAE----RAP---- 218 (258)
T ss_pred ---ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccC-------CcHHHHHHHHh----cCC----
Confidence 12357999999988887654 35899999999988654321110 00111111111 001
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+...+|+|++++.++......-. +.++.+.++
T Consensus 219 -~~r~~~p~dva~~~~~L~s~~~~~it--G~~i~vdgg 253 (258)
T PRK07533 219 -LRRLVDIDDVGAVAAFLASDAARRLT--GNTLYIDGG 253 (258)
T ss_pred -cCCCCCHHHHHHHHHHHhChhhcccc--CcEEeeCCc
Confidence 11356779999999888764322211 667766554
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.6e-12 Score=121.49 Aligned_cols=212 Identities=10% Similarity=0.043 Sum_probs=133.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|++|||||+|+||++++++|++.|+ +|+++.|+... ..+.+. ..++.++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~--~~~~~~------------------------~~~~~~~~ 52 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ---PVIVSYRTHYP--AIDGLR------------------------QAGAQCIQ 52 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCchh--HHHHHH------------------------HcCCEEEE
Confidence 57999999999999999999999996 45788886532 111111 12367889
Q ss_pred cCCCCCCCCCCchhhHHHh---ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---c--cee
Q 037479 92 GDITREDLGVKDSNLREEM---WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---K--LIV 156 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~---~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~--~~~ 156 (492)
+|+++++- -....+.+ ..++|++||+||.... .+.++..+++|+.++..+.+.+.... + ..+
T Consensus 53 ~D~~~~~~---~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~ 129 (236)
T PRK06483 53 ADFSTNAG---IMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASD 129 (236)
T ss_pred cCCCCHHH---HHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCce
Confidence 99995321 01111122 2358999999996421 24577889999999988877665521 1 247
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|++||....... .....
T Consensus 130 iv~~ss~~~~~~~--------------------------------------------------------------~~~~~ 147 (236)
T PRK06483 130 IIHITDYVVEKGS--------------------------------------------------------------DKHIA 147 (236)
T ss_pred EEEEcchhhccCC--------------------------------------------------------------CCCcc
Confidence 8999874322110 12357
Q ss_pred HHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehh
Q 037479 237 YVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPAD 312 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vd 312 (492)
|+.||+..|.+++.+ .+++++..|+|+.|......+ ............ + --....+
T Consensus 148 Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-----------~~~~~~~~~~~~--~-------~~~~~~~ 207 (236)
T PRK06483 148 YAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD-----------AAYRQKALAKSL--L-------KIEPGEE 207 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC-----------HHHHHHHhccCc--c-------ccCCCHH
Confidence 999999999998765 346999999999874321100 011111111000 0 0123578
Q ss_pred hhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 313 MVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 313 dva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
|+++++..++. ..... +.++.+.++
T Consensus 208 ~va~~~~~l~~-~~~~~---G~~i~vdgg 232 (236)
T PRK06483 208 EIIDLVDYLLT-SCYVT---GRSLPVDGG 232 (236)
T ss_pred HHHHHHHHHhc-CCCcC---CcEEEeCcc
Confidence 99999988875 22122 777877765
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.9e-12 Score=123.39 Aligned_cols=168 Identities=15% Similarity=0.151 Sum_probs=113.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|. +|+++.|+.... +... +.+.++.+ ..++..
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~---~V~~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~ 63 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGA---SVAICGRDEERL---ASAE---------ARLREKFP-------GARLLA 63 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHHHH---HHHH---------HHHHhhCC-------CceEEE
Confidence 5789999999999999999999999996 458888864321 1111 11111111 136788
Q ss_pred EecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ .+..+.+ ...+|++||+||.... .+.+...+++|+.+...+++.+... .
T Consensus 64 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 136 (265)
T PRK07062 64 ARCDVLD-------EADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS 136 (265)
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Confidence 9999995 3333232 2468999999996432 1356778899999887777665431 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 154 (265)
T PRK07062 137 AAASIVCVNSLLALQPE--------------------------------------------------------------P 154 (265)
T ss_pred CCcEEEEeccccccCCC--------------------------------------------------------------C
Confidence 34589999986543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecC
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGT 268 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~ 268 (492)
....|+.+|+..+.+.+.. ..|++++.++|+.|-.+
T Consensus 155 ~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 155 HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccc
Confidence 2246888888777666543 35899999999988664
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.1e-12 Score=123.64 Aligned_cols=224 Identities=12% Similarity=0.107 Sum_probs=140.7
Q ss_pred HHhhcCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhc
Q 037479 6 VLEFLENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALI 83 (492)
Q Consensus 6 ~~~~~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (492)
-..++++|+++||||+ +-||..++++|++.|+ +|++..|+.. ..++++ + +.++.
T Consensus 4 ~~~~~~~k~~lItGas~~~GIG~aia~~la~~G~---~V~l~~r~~~---~~~~~~-~---------l~~~~-------- 59 (272)
T PRK08159 4 ASGLMAGKRGLILGVANNRSIAWGIAKACRAAGA---ELAFTYQGDA---LKKRVE-P---------LAAEL-------- 59 (272)
T ss_pred ccccccCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCchH---HHHHHH-H---------HHHhc--------
Confidence 3467889999999997 8999999999999996 4466666421 122222 1 11111
Q ss_pred cCceEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHH
Q 037479 84 SEKITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVL 145 (492)
Q Consensus 84 ~~~v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll 145 (492)
.....+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+..++
T Consensus 60 -~~~~~~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~ 131 (272)
T PRK08159 60 -GAFVAGHCDVTD-------EASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVA 131 (272)
T ss_pred -CCceEEecCCCC-------HHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHH
Confidence 224568999995 33333332 368999999996531 1457888999999999999
Q ss_pred HHHHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhh
Q 037479 146 NFSKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLG 224 (492)
Q Consensus 146 ~~a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (492)
+.+.... +-.++|++||.... . ..
T Consensus 132 ~~~~~~~~~~g~Iv~iss~~~~--~-------~~---------------------------------------------- 156 (272)
T PRK08159 132 QRAEKLMTDGGSILTLTYYGAE--K-------VM---------------------------------------------- 156 (272)
T ss_pred HHHHHhcCCCceEEEEeccccc--c-------CC----------------------------------------------
Confidence 9876532 22478888874321 1 01
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEe
Q 037479 225 IKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFL 299 (492)
Q Consensus 225 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~ 299 (492)
.....|+.||+..+.+.+.. ..++.+..+.|+.|-.+.....+ ... . ........ .+
T Consensus 157 -------p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~----~~~---~-~~~~~~~~---~p 218 (272)
T PRK08159 157 -------PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIG----DFR---Y-ILKWNEYN---AP 218 (272)
T ss_pred -------CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCC----cch---H-HHHHHHhC---Cc
Confidence 12357999999988887654 45799999999988654321111 000 0 10100000 01
Q ss_pred cCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 300 GDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 300 ~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|++++.++....... . +.++.+.++
T Consensus 219 -----~~r~~~peevA~~~~~L~s~~~~~i-t-G~~i~vdgG 253 (272)
T PRK08159 219 -----LRRTVTIEEVGDSALYLLSDLSRGV-T-GEVHHVDSG 253 (272)
T ss_pred -----ccccCCHHHHHHHHHHHhCccccCc-c-ceEEEECCC
Confidence 1124678999999998886432222 2 677877776
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.5e-12 Score=127.68 Aligned_cols=107 Identities=21% Similarity=0.305 Sum_probs=78.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|. +|+++.|++.. +...+ ... ..++..
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~---~Vi~l~r~~~~------l~~~~---------~~~---------~~~v~~ 228 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA---KVVALTSNSDK------ITLEI---------NGE---------DLPVKT 228 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH------HHHHH---------hhc---------CCCeEE
Confidence 4689999999999999999999999996 55777775421 11000 000 124667
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHh
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF----DERYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
+.+|++ +++.....++++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 229 v~~Dvs-------d~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 229 LHWQVG-------QEAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred EEeeCC-------CHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999 555555777899999999986432 135678899999999999998754
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.42 E-value=6e-12 Score=124.34 Aligned_cols=171 Identities=21% Similarity=0.189 Sum_probs=115.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.|+.++||||||.||++++++|++.|.+ |+++.|+... .+.+.+ .++...+ ..++..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~---Vil~~R~~~~---l~~~~~---------~l~~~~~-------~~~~~~~ 109 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLN---LVLVARNPDK---LKDVSD---------SIQSKYS-------KTQIKTV 109 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCC---EEEEECCHHH---HHHHHH---------HHHHHCC-------CcEEEEE
Confidence 4799999999999999999999999974 5888886432 122211 1211111 1356778
Q ss_pred ecCCCCCCCCCCchhhH---HHhcc--CccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 91 PGDITREDLGVKDSNLR---EEMWN--KLDVVINLAATTN-----F----DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~---~~~~~--~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
.+|+++. ..+.. .+.++ ++|++||+||... + .+.++..+++|+.|+..+.+++... .+
T Consensus 110 ~~Dl~~~-----~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~ 184 (320)
T PLN02780 110 VVDFSGD-----IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK 184 (320)
T ss_pred EEECCCC-----cHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence 8999841 11212 22233 4669999999752 1 1345678999999999998887542 13
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||........ . ..
T Consensus 185 ~g~IV~iSS~a~~~~~~-------~-----------------------------------------------------p~ 204 (320)
T PLN02780 185 KGAIINIGSGAAIVIPS-------D-----------------------------------------------------PL 204 (320)
T ss_pred CcEEEEEechhhccCCC-------C-----------------------------------------------------cc
Confidence 46899999965432100 0 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecC
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGT 268 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~ 268 (492)
...|+.||+..+.+.+.. ..|+.+.++.|+.|-.+
T Consensus 205 ~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 205 YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 368999999998887654 35899999999988654
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.8e-12 Score=119.27 Aligned_cols=229 Identities=17% Similarity=0.124 Sum_probs=138.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|.||+.++..|++.|. +|+++.|+... .+.+.++ +... ...++..
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~--------~~~~~~~ 61 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGC---HLHLVARDADA---LEALAAD---------LRAA--------HGVDVAV 61 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHHH---------HHhh--------cCCceEE
Confidence 4689999999999999999999999986 56888886431 1111111 1111 1246788
Q ss_pred EecCCCCCCCCCCchhhHHHhc---cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---ccee
Q 037479 90 VPGDITREDLGVKDSNLREEMW---NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---KLIV 156 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~---~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~~ 156 (492)
+.+|+++ .+....++ ..+|++||+||.... .+.++..+++|+.|...+.+.+.... +-.+
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ 134 (259)
T PRK06125 62 HALDLSS-------PEAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGV 134 (259)
T ss_pred EEecCCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcE
Confidence 9999994 33333333 479999999996532 14567889999999998888764321 2247
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|++||.... .. . .....
T Consensus 135 iv~iss~~~~--~~-------~-----------------------------------------------------~~~~~ 152 (259)
T PRK06125 135 IVNVIGAAGE--NP-------D-----------------------------------------------------ADYIC 152 (259)
T ss_pred EEEecCcccc--CC-------C-----------------------------------------------------CCchH
Confidence 8888874221 10 0 12346
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-CccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-PGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
|+.+|+..+.+.+.. ..++++..+.|+.|-.+..... ................+.. ..+ ..-+.+
T Consensus 153 y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~ 223 (259)
T PRK06125 153 GSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLA----GLP-----LGRPAT 223 (259)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhc----cCC-----cCCCcC
Confidence 889999988887754 3589999999988876531100 0000000000000001000 001 113567
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++|+|++++.++....... . +.++.+.++
T Consensus 224 ~~~va~~~~~l~~~~~~~~-~-G~~i~vdgg 252 (259)
T PRK06125 224 PEEVADLVAFLASPRSGYT-S-GTVVTVDGG 252 (259)
T ss_pred HHHHHHHHHHHcCchhccc-c-CceEEecCC
Confidence 8999999988875322211 1 677777665
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.6e-12 Score=118.68 Aligned_cols=195 Identities=14% Similarity=0.060 Sum_probs=128.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++||||+|.||+++++.|++.|+ +|+++.|+... .+.+. ++ .++..+.+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~---~v~~~~r~~~~---~~~~~-------------~~----------~~~~~~~~ 51 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH---KVTLVGARRDD---LEVAA-------------KE----------LDVDAIVC 51 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------Hh----------ccCcEEec
Confidence 4799999999999999999999986 45777775321 11111 00 13567889
Q ss_pred CCCCCCCCCCchhhHHHhcc----CccEEEEcccccC---------c---chhHHHHHHHhHHHHHHHHHHHHhcc-cce
Q 037479 93 DITREDLGVKDSNLREEMWN----KLDVVINLAATTN---------F---DERYDVALDLNTFGAKHVLNFSKKCA-KLI 155 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~----~vd~Vih~Aa~~~---------~---~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~ 155 (492)
|+++ .+..+.+++ .+|++||+|+... + .+.+...+++|+.|+.++++++.... .-.
T Consensus 52 D~~~-------~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g 124 (223)
T PRK05884 52 DNTD-------PASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGG 124 (223)
T ss_pred CCCC-------HHHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9994 443434433 6899999997421 1 24577889999999999999886531 224
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
++|.+||.. . ....
T Consensus 125 ~Iv~isS~~---~---------------------------------------------------------------~~~~ 138 (223)
T PRK05884 125 SIISVVPEN---P---------------------------------------------------------------PAGS 138 (223)
T ss_pred eEEEEecCC---C---------------------------------------------------------------CCcc
Confidence 799998743 0 0125
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
.|+.||+..+.+.+.. ..++++..+.|+.|..+.. .... .. + .-.
T Consensus 139 ~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~-----------------~~~~-----~~---p-----~~~ 188 (223)
T PRK05884 139 AEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY-----------------DGLS-----RT---P-----PPV 188 (223)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh-----------------hhcc-----CC---C-----CCC
Confidence 7999999988888655 3579999999988753211 0000 00 0 115
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+|+++++...+........ +.++.+.++
T Consensus 189 ~~~ia~~~~~l~s~~~~~v~--G~~i~vdgg 217 (223)
T PRK05884 189 AAEIARLALFLTTPAARHIT--GQTLHVSHG 217 (223)
T ss_pred HHHHHHHHHHHcCchhhccC--CcEEEeCCC
Confidence 78999999887764322221 667777665
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.7e-12 Score=120.16 Aligned_cols=221 Identities=14% Similarity=0.107 Sum_probs=136.0
Q ss_pred hcCCCEEEEeCC--cchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 9 FLENKTILVTGA--TGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 9 ~~~~~~vlITGa--tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
++++|+++|||| ++.||+.++++|++.|.+ |++..|..+. .+.++ ++ ..+. ..
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~---v~~~~~~~~~---~~~~~-~~---------~~~~---------~~ 57 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAE---LAFTYVVDKL---EERVR-KM---------AAEL---------DS 57 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCcHHH---HHHHH-HH---------Hhcc---------CC
Confidence 478999999997 679999999999999964 4665554221 12221 11 1111 22
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------c----hhHHHHHHHhHHHHHHHHHH
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------D----ERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~----~~~~~~~~~Nv~gt~~ll~~ 147 (492)
...+.+|++++ +..+.++ .++|++||+||.... + +.++..+++|+.++..+.+.
T Consensus 58 ~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~ 130 (261)
T PRK08690 58 ELVFRCDVASD-------DEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKA 130 (261)
T ss_pred ceEEECCCCCH-------HHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHH
Confidence 35789999953 3333333 469999999997531 1 24566788999999888876
Q ss_pred HHhcc--cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhc
Q 037479 148 SKKCA--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGI 225 (492)
Q Consensus 148 a~~~~--~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (492)
+..+. +-.++|++||.......
T Consensus 131 ~~p~m~~~~g~Iv~iss~~~~~~~-------------------------------------------------------- 154 (261)
T PRK08690 131 ARPMMRGRNSAIVALSYLGAVRAI-------------------------------------------------------- 154 (261)
T ss_pred HHHHhhhcCcEEEEEcccccccCC--------------------------------------------------------
Confidence 65421 12478888875432110
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEec
Q 037479 226 KRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300 (492)
Q Consensus 226 ~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~ 300 (492)
.....|+.||+..+.+.+.. ..|+.+..+.|+.|-.+... ++ .........+.. . .+
T Consensus 155 ------~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~---~~----~~~~~~~~~~~~-~---~p- 216 (261)
T PRK08690 155 ------PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAAS---GI----ADFGKLLGHVAA-H---NP- 216 (261)
T ss_pred ------CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhh---cC----CchHHHHHHHhh-c---CC-
Confidence 12357999999988877654 45899999999998664321 11 000111111111 0 01
Q ss_pred CCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 301 ~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+...+|||+++..++....... . +.++.+.++
T Consensus 217 ----~~r~~~peevA~~v~~l~s~~~~~~-t-G~~i~vdgG 251 (261)
T PRK08690 217 ----LRRNVTIEEVGNTAAFLLSDLSSGI-T-GEITYVDGG 251 (261)
T ss_pred ----CCCCCCHHHHHHHHHHHhCcccCCc-c-eeEEEEcCC
Confidence 1235678999999999887432222 1 667776665
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.8e-12 Score=120.71 Aligned_cols=249 Identities=10% Similarity=0.034 Sum_probs=138.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+++|||| |+||+++++.|. .|. +|+++.|+... .+.+.++ ++.. ..++.++.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~---~Vv~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~~~ 55 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGK---KVLLADYNEEN---LEAAAKT---------LREA---------GFDVSTQE 55 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCeEEEEE
Confidence 579999998 789999999996 675 56888886421 1111111 1110 14678899
Q ss_pred cCCCCCCCCCCchhhHHHhc------cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcc-cceeEEEeeece
Q 037479 92 GDITREDLGVKDSNLREEMW------NKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCA-KLIVLVHVSTAF 164 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~------~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~V~vST~~ 164 (492)
+|+++ .+..+.++ ..+|++||+||.....+.+...+++|+.|+.++++.+.... .-.++|.+||..
T Consensus 56 ~Dv~d-------~~~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 56 VDVSS-------RESVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred eecCC-------HHHHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 99995 33333333 36999999999765556788899999999999999886531 113456677643
Q ss_pred eecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 165 VWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 165 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
...... ...+.. +.. ...+.+...... . ..+.........|+.||+..
T Consensus 129 ~~~~~~-~~~~~~-~~~------~~~~~~~~~~~~----------------------~--~~~~~~~~~~~~Y~asKaa~ 176 (275)
T PRK06940 129 GHRLPA-LTAEQE-RAL------ATTPTEELLSLP----------------------F--LQPDAIEDSLHAYQIAKRAN 176 (275)
T ss_pred cccCcc-cchhhh-ccc------cccccccccccc----------------------c--ccccccCCccchhHHHHHHH
Confidence 321110 000000 000 000000000000 0 00000001245799999998
Q ss_pred HHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHH
Q 037479 245 EMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 245 E~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii 319 (492)
+.+.+.. ..++.+..+.|+.|-.+..... +... . ......+.. ..+ ..-+...+|+|+++.
T Consensus 177 ~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~--~~~~-~--~~~~~~~~~----~~p-----~~r~~~peeia~~~~ 242 (275)
T PRK06940 177 ALRVMAEAVKWGERGARINSISPGIISTPLAQDE--LNGP-R--GDGYRNMFA----KSP-----AGRPGTPDEIAALAE 242 (275)
T ss_pred HHHHHHHHHHHccCCeEEEEeccCcCcCccchhh--hcCC-c--hHHHHHHhh----hCC-----cccCCCHHHHHHHHH
Confidence 8887644 3589999999998876542110 0000 0 001111100 001 113567899999998
Q ss_pred HHHHhhhcCCCCCCcEEEecCC
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++....... . +.++.+.++
T Consensus 243 fL~s~~~~~i-t-G~~i~vdgg 262 (275)
T PRK06940 243 FLMGPRGSFI-T-GSDFLVDGG 262 (275)
T ss_pred HHcCcccCcc-c-CceEEEcCC
Confidence 8875332221 1 677777665
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=8e-12 Score=123.29 Aligned_cols=182 Identities=13% Similarity=0.135 Sum_probs=119.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||||+||++++++|++.|. +|+++.|+.... +... +.+....+ ..++.+
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~---~Vil~~R~~~~~---~~~~---------~~l~~~~~-------~~~v~~ 69 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGA---EVILPVRNRAKG---EAAV---------AAIRTAVP-------DAKLSL 69 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHH---------HHHHHhCC-------CCceEE
Confidence 5789999999999999999999999995 568888864321 1111 11222211 146888
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc------hhHHHHHHHhHHHHHHHHHHHHhcc--cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD------ERYDVALDLNTFGAKHVLNFSKKCA--KL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~------~~~~~~~~~Nv~gt~~ll~~a~~~~--~~ 154 (492)
+.+|+++ .+..+.++ ..+|++||+||..... +.++..+.+|+.|...+.+.+.... +-
T Consensus 70 ~~~Dl~d-------~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~ 142 (313)
T PRK05854 70 RALDLSS-------LASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGR 142 (313)
T ss_pred EEecCCC-------HHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCC
Confidence 9999994 33333332 3589999999975321 4567789999999888777765311 23
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... +.-...... ......
T Consensus 143 ~riv~vsS~~~~~~~---~~~~~~~~~-----------------------------------------------~~~~~~ 172 (313)
T PRK05854 143 ARVTSQSSIAARRGA---INWDDLNWE-----------------------------------------------RSYAGM 172 (313)
T ss_pred CCeEEEechhhcCCC---cCccccccc-----------------------------------------------ccCcch
Confidence 579999986543211 110000000 001234
Q ss_pred chHHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecCCC
Q 037479 235 NTYVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~~~ 270 (492)
..|+.||+..+.+..++ ..++.+..+.|+.|-....
T Consensus 173 ~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~ 215 (313)
T PRK05854 173 RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL 215 (313)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence 68999999998887655 2469999999999876543
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.9e-12 Score=120.16 Aligned_cols=133 Identities=21% Similarity=0.240 Sum_probs=92.3
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHH-HHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSAT-VRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~-~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
+-+.||.|+|||||..||.+++..|.+.|. ++++++|..+..... +.++ +..+ .++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~---~l~lvar~~rrl~~v~~~l~-------------~~~~-------~~~ 64 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGA---KLVLVARRARRLERVAEELR-------------KLGS-------LEK 64 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCC---ceEEeehhhhhHHHHHHHHH-------------HhCC-------cCc
Confidence 456899999999999999999999999995 457888876653322 2222 2211 126
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcc---ccee
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCA---KLIV 156 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~~ 156 (492)
+.++++|+++.+.-...-++....+.++|++||.||..... +.....+++|+.|+..+.+++-... +-.+
T Consensus 65 v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~Gh 144 (282)
T KOG1205|consen 65 VLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGH 144 (282)
T ss_pred cEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCe
Confidence 99999999954321111111113456899999999987532 3456789999999998888875432 2247
Q ss_pred EEEeeec
Q 037479 157 LVHVSTA 163 (492)
Q Consensus 157 ~V~vST~ 163 (492)
+|.+||.
T Consensus 145 IVvisSi 151 (282)
T KOG1205|consen 145 IVVISSI 151 (282)
T ss_pred EEEEecc
Confidence 9999984
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.40 E-value=7e-12 Score=120.23 Aligned_cols=223 Identities=17% Similarity=0.152 Sum_probs=138.5
Q ss_pred cCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++||||+ +-||+.++++|++.|.+ |++..|+.......+.+. + +.++ ..++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~---v~~~~~~~~~~~~~~~~~-~---------~~~~---------~~~~ 61 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAE---LGITYLPDEKGRFEKKVR-E---------LTEP---------LNPS 61 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCE---EEEEecCcccchHHHHHH-H---------HHhc---------cCcc
Confidence 468999999986 79999999999999974 466666533211122221 1 1111 1235
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC-------c----chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN-------F----DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
.++.+|+++ ++..+.++ .++|++||+||... + .+.++..+++|+.|+..+.+.+.
T Consensus 62 ~~~~~Dl~d-------~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~ 134 (258)
T PRK07370 62 LFLPCDVQD-------DAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAK 134 (258)
T ss_pred eEeecCcCC-------HHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHH
Confidence 678999995 33333332 36899999999642 1 14567889999999999888775
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... .-.++|++||...... +
T Consensus 135 ~~m~~~g~Iv~isS~~~~~~---------~-------------------------------------------------- 155 (258)
T PRK07370 135 PLMSEGGSIVTLTYLGGVRA---------I-------------------------------------------------- 155 (258)
T ss_pred HHHhhCCeEEEEeccccccC---------C--------------------------------------------------
Confidence 421 2247999998532210 0
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..++.+..+.|+.|-.+......+ .......... . .
T Consensus 156 ---~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~-------~~~~~~~~~~-~--------~ 216 (258)
T PRK07370 156 ---PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG-------ILDMIHHVEE-K--------A 216 (258)
T ss_pred ---cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc-------chhhhhhhhh-c--------C
Confidence 12357999999999888755 458999999999987653211110 0011111000 0 0
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+...+|+++++..++........ ++++.+.++
T Consensus 217 p~~r~~~~~dva~~~~fl~s~~~~~~t--G~~i~vdgg 252 (258)
T PRK07370 217 PLRRTVTQTEVGNTAAFLLSDLASGIT--GQTIYVDAG 252 (258)
T ss_pred CcCcCCCHHHHHHHHHHHhChhhcccc--CcEEEECCc
Confidence 112355679999999998864332221 666766554
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-11 Score=119.15 Aligned_cols=220 Identities=13% Similarity=0.102 Sum_probs=136.2
Q ss_pred cCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|++|||||++ -||+.++++|++.|.+ |++..|+... .+++. + +.++. ...
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~---V~~~~r~~~~---~~~~~-~---------~~~~~---------g~~ 59 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAE---LAFTYQGEAL---GKRVK-P---------LAESL---------GSD 59 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCE---EEEecCchHH---HHHHH-H---------HHHhc---------CCc
Confidence 5789999999997 9999999999999974 4666664321 12222 1 11111 112
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
..+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 60 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~ 132 (271)
T PRK06505 60 FVLPCDVED-------IASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAA 132 (271)
T ss_pred eEEeCCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHH
Confidence 468899995 33333332 468999999996531 14577889999999999888775
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... .-.++|++||.......
T Consensus 133 ~~m~~~G~Iv~isS~~~~~~~----------------------------------------------------------- 153 (271)
T PRK06505 133 KLMPDGGSMLTLTYGGSTRVM----------------------------------------------------------- 153 (271)
T ss_pred HhhccCceEEEEcCCCccccC-----------------------------------------------------------
Confidence 421 12478999885322110
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..|+.+..|.|+.|-.+...... + ..... ...... .+
T Consensus 154 ---~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~---~----~~~~~-~~~~~~---~p---- 215 (271)
T PRK06505 154 ---PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIG---D----ARAIF-SYQQRN---SP---- 215 (271)
T ss_pred ---CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCc---c----hHHHH-HHHhhc---CC----
Confidence 12357999999988887654 35899999999988765321110 0 00111 100000 01
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|++++.++....... . +.+..+.++
T Consensus 216 -~~r~~~peeva~~~~fL~s~~~~~i-t-G~~i~vdgG 250 (271)
T PRK06505 216 -LRRTVTIDEVGGSALYLLSDLSSGV-T-GEIHFVDSG 250 (271)
T ss_pred -ccccCCHHHHHHHHHHHhCcccccc-C-ceEEeecCC
Confidence 0123457999999998876322221 1 667777665
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-11 Score=117.63 Aligned_cols=221 Identities=14% Similarity=0.095 Sum_probs=136.6
Q ss_pred hcCCCEEEEeCC--cchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 9 FLENKTILVTGA--TGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 9 ~~~~~~vlITGa--tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
++++|+++|||| ++-||..++++|++.|.+| ++..|.... .+++. + +.++. ..
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v---~~~~~~~~~---~~~~~-~---------~~~~~---------~~ 57 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGAEL---AFTYVGDRF---KDRIT-E---------FAAEF---------GS 57 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeE---EEEccchHH---HHHHH-H---------HHHhc---------CC
Confidence 467899999996 6799999999999999754 555553221 12221 1 11111 12
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc------------chhHHHHHHHhHHHHHHHHHH
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF------------DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
...+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+.++
T Consensus 58 ~~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~ 130 (260)
T PRK06997 58 DLVFPCDVASD-------EQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKA 130 (260)
T ss_pred cceeeccCCCH-------HHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHH
Confidence 24678999953 3333333 469999999987421 135677899999999999888
Q ss_pred HHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 148 SKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 148 a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
+.... +-.++|++||.... .. +
T Consensus 131 ~lp~m~~~g~Ii~iss~~~~--~~-------~------------------------------------------------ 153 (260)
T PRK06997 131 ALPMLSDDASLLTLSYLGAE--RV-------V------------------------------------------------ 153 (260)
T ss_pred HHHhcCCCceEEEEeccccc--cC-------C------------------------------------------------
Confidence 76532 22479999875422 10 0
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~ 301 (492)
.....|+.||+..+.+.+.. ..++.+..|.|+.|-.+.... + .. .......+.. . .+
T Consensus 154 -----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~---~-~~---~~~~~~~~~~-~---~p-- 215 (260)
T PRK06997 154 -----PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG---I-KD---FGKILDFVES-N---AP-- 215 (260)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc---c-cc---hhhHHHHHHh-c---Cc--
Confidence 12357999999998887754 357999999999886542211 0 00 0011101100 0 01
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+...+|+++++..++....... . +.++.+.++
T Consensus 216 ---~~r~~~pedva~~~~~l~s~~~~~i-t-G~~i~vdgg 250 (260)
T PRK06997 216 ---LRRNVTIEEVGNVAAFLLSDLASGV-T-GEITHVDSG 250 (260)
T ss_pred ---ccccCCHHHHHHHHHHHhCccccCc-c-eeEEEEcCC
Confidence 1135678999999999887432222 1 677777665
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.4e-12 Score=121.08 Aligned_cols=220 Identities=11% Similarity=0.084 Sum_probs=136.9
Q ss_pred cCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++||||+ +-||..+++.|++.|. +|++..|+... .+++. + +.++. ...
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~---~Vil~~r~~~~---~~~~~-~---------~~~~~--------~~~- 57 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGA---ELAFTYLNEAL---KKRVE-P---------IAQEL--------GSD- 57 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEecCHHH---HHHHH-H---------HHHhc--------CCc-
Confidence 468999999997 7999999999999996 45777775321 12222 1 11111 122
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC-------c----chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN-------F----DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
..+.+|++++ +..+.++ .++|++||+||... + .+.++..+++|+.|+..+.+.+.
T Consensus 58 ~~~~~Dv~d~-------~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 130 (274)
T PRK08415 58 YVYELDVSKP-------EHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALL 130 (274)
T ss_pred eEEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHH
Confidence 5688999953 3333332 46899999999642 1 14567889999999999988776
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... .-.++|++||.......
T Consensus 131 p~m~~~g~Iv~isS~~~~~~~----------------------------------------------------------- 151 (274)
T PRK08415 131 PLLNDGASVLTLSYLGGVKYV----------------------------------------------------------- 151 (274)
T ss_pred HHhccCCcEEEEecCCCccCC-----------------------------------------------------------
Confidence 532 22479999985322110
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..|+.+..+.|+.|..+.....+. ... ........ .|
T Consensus 152 ---~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-------~~~-~~~~~~~~---~p---- 213 (274)
T PRK08415 152 ---PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD-------FRM-ILKWNEIN---AP---- 213 (274)
T ss_pred ---CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch-------hhH-Hhhhhhhh---Cc----
Confidence 12347999999988887654 358999999999887643211100 000 00000000 01
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|||++++.++........ +.++.+.++
T Consensus 214 -l~r~~~pedva~~v~fL~s~~~~~it--G~~i~vdGG 248 (274)
T PRK08415 214 -LKKNVSIEEVGNSGMYLLSDLSSGVT--GEIHYVDAG 248 (274)
T ss_pred -hhccCCHHHHHHHHHHHhhhhhhccc--ccEEEEcCc
Confidence 01245679999999988874332221 677777766
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.7e-11 Score=116.10 Aligned_cols=222 Identities=15% Similarity=0.092 Sum_probs=138.5
Q ss_pred cCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++||||+ +-||+.++++|++.|. +|++..|+.+.....+.+. ++.+ ..++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~---~v~~~~r~~~~~~~~~~~~-------------~~~~-------~~~~ 61 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGA---KLVFTYAGERLEKEVRELA-------------DTLE-------GQES 61 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEecCcccchHHHHHHH-------------HHcC-------CCce
Confidence 578999999997 8999999999999996 4577777543322222222 1110 1467
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------c----hhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------D----ERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~----~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
..+.+|++++ +..+.++ .++|++||+||.... . +.+...+++|+.++..+.+.+.
T Consensus 62 ~~~~~Dv~d~-------~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 134 (257)
T PRK08594 62 LLLPCDVTSD-------EEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAK 134 (257)
T ss_pred EEEecCCCCH-------HHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHH
Confidence 8899999953 3332322 469999999986421 1 3456778999999998887776
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... .-.++|++||...... .
T Consensus 135 ~~~~~~g~Iv~isS~~~~~~---------~-------------------------------------------------- 155 (257)
T PRK08594 135 KLMTEGGSIVTLTYLGGERV---------V-------------------------------------------------- 155 (257)
T ss_pred HhcccCceEEEEcccCCccC---------C--------------------------------------------------
Confidence 532 2247999998543211 0
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..++.+..|.|+.|-.+.....++ .. ........ ..+
T Consensus 156 ---~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~----~~---~~~~~~~~----~~p---- 217 (257)
T PRK08594 156 ---QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG----FN---SILKEIEE----RAP---- 217 (257)
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc----cc---HHHHHHhh----cCC----
Confidence 12347999999999888754 358999999999887643211100 00 00000000 000
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+...+|++++++.++........ +.+..+.++
T Consensus 218 -~~r~~~p~~va~~~~~l~s~~~~~~t--G~~~~~dgg 252 (257)
T PRK08594 218 -LRRTTTQEEVGDTAAFLFSDLSRGVT--GENIHVDSG 252 (257)
T ss_pred -ccccCCHHHHHHHHHHHcCccccccc--ceEEEECCc
Confidence 11346679999999888764332221 666766554
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.7e-11 Score=115.38 Aligned_cols=222 Identities=13% Similarity=0.085 Sum_probs=136.4
Q ss_pred hhcCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 8 EFLENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 8 ~~~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
..+++|+++||||++ -||+.++++|++.|.+ |++..|+.. ..+.+. + +.++. .
T Consensus 4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~---v~~~~r~~~---~~~~~~-~---------l~~~~---------g 58 (260)
T PRK06603 4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAE---LWFTYQSEV---LEKRVK-P---------LAEEI---------G 58 (260)
T ss_pred cccCCcEEEEECCCCCcchHHHHHHHHHHcCCE---EEEEeCchH---HHHHHH-H---------HHHhc---------C
Confidence 346789999999997 7999999999999964 466666421 112221 1 11111 1
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC-------c----chhHHHHHHHhHHHHHHHHHH
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN-------F----DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
....+.+|++++ +..+.++ .++|++||+|+... + .+.++..+++|+.|+..+++.
T Consensus 59 ~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 131 (260)
T PRK06603 59 CNFVSELDVTNP-------KSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRS 131 (260)
T ss_pred CceEEEccCCCH-------HHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 123578999953 3333333 46999999998642 1 145778899999999998887
Q ss_pred HHhc-ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 148 SKKC-AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 148 a~~~-~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
+... ..-.++|++||...... .
T Consensus 132 ~~~~m~~~G~Iv~isS~~~~~~---------~------------------------------------------------ 154 (260)
T PRK06603 132 AEALMHDGGSIVTLTYYGAEKV---------I------------------------------------------------ 154 (260)
T ss_pred HHhhhccCceEEEEecCccccC---------C------------------------------------------------
Confidence 6542 11247999998432210 0
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~ 301 (492)
.....|+.||+..+.+.+.. ..++.+..+.|+.|-.+.....+ . .......... . .+
T Consensus 155 -----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~----~---~~~~~~~~~~-~---~p-- 216 (260)
T PRK06603 155 -----PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIG----D---FSTMLKSHAA-T---AP-- 216 (260)
T ss_pred -----CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCC----C---cHHHHHHHHh-c---CC--
Confidence 12357999999988887754 45899999999988654321111 0 0111111110 0 01
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+...+|+|++++.++....... . +..+.+.++
T Consensus 217 ---~~r~~~pedva~~~~~L~s~~~~~i-t-G~~i~vdgG 251 (260)
T PRK06603 217 ---LKRNTTQEDVGGAAVYLFSELSKGV-T-GEIHYVDCG 251 (260)
T ss_pred ---cCCCCCHHHHHHHHHHHhCcccccC-c-ceEEEeCCc
Confidence 1124567999999999886432221 1 566666554
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.7e-12 Score=107.60 Aligned_cols=168 Identities=20% Similarity=0.135 Sum_probs=126.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|++||.||||-.|..|+..++++ +..++||++.|.+....+ ..+++..
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d~a----------------------------t~k~v~q 66 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPDPA----------------------------TDKVVAQ 66 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCCcc----------------------------ccceeee
Confidence 67899999999999999999999987 578999999998632211 1266777
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
+..|.++ -+......+++|+.|.|-|+++-....+-.+++.-.-...+.++|++- +++.|+.+||+.+..+.
T Consensus 67 ~~vDf~K-------l~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~sS 138 (238)
T KOG4039|consen 67 VEVDFSK-------LSQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADPSS 138 (238)
T ss_pred EEechHH-------HHHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCccc
Confidence 8888773 233335567999999999998765545556666666777788889886 99999999998765432
Q ss_pred ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 170 SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 170 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
. -.|-.+|...|+-+.
T Consensus 139 r----------------------------------------------------------------FlY~k~KGEvE~~v~ 154 (238)
T KOG4039|consen 139 R----------------------------------------------------------------FLYMKMKGEVERDVI 154 (238)
T ss_pred c----------------------------------------------------------------eeeeeccchhhhhhh
Confidence 1 247788888888887
Q ss_pred HhcCCCcEEEEeCCceecCCCCCCC-ccccC
Q 037479 250 HLKENMSVAIVRPTIITGTYKEPFP-GWAEG 279 (492)
Q Consensus 250 ~~~~~~~~~ivRPs~v~g~~~~p~~-gw~~~ 279 (492)
+... -.++|+||+.+.|...+.-+ +|..+
T Consensus 155 eL~F-~~~~i~RPG~ll~~R~esr~geflg~ 184 (238)
T KOG4039|consen 155 ELDF-KHIIILRPGPLLGERTESRQGEFLGN 184 (238)
T ss_pred hccc-cEEEEecCcceecccccccccchhhh
Confidence 7522 26899999999999887654 35544
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.4e-11 Score=116.57 Aligned_cols=162 Identities=13% Similarity=0.050 Sum_probs=107.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++||||+|.||+.++++|++.|+ +|+++.|+... .+...+++ .+ ..++.++.+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~l---------~~----------~~~~~~~~~ 55 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA---RVVISSRNEEN---LEKALKEL---------KE----------YGEVYAVKA 55 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHHHH---------Hh----------cCCceEEEc
Confidence 5899999999999999999999996 45788876432 11111111 10 135778999
Q ss_pred CCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC-----cc----hhHHHHHHHhHHHHHHHHHHHHh----cc
Q 037479 93 DITREDLGVKDSNLREEMW-------NKLDVVINLAATTN-----FD----ERYDVALDLNTFGAKHVLNFSKK----CA 152 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~-----~~----~~~~~~~~~Nv~gt~~ll~~a~~----~~ 152 (492)
|+++ .+..+.++ .++|+|||+||... +. +.+...+.+|+.++..+.+.+.. ..
T Consensus 56 Dv~d-------~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~ 128 (259)
T PRK08340 56 DLSD-------KDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK 128 (259)
T ss_pred CCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC
Confidence 9995 33333333 46999999999642 11 23455678888886655443321 11
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||..+.... .
T Consensus 129 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 146 (259)
T PRK08340 129 MKGVLVYLSSVSVKEPM--------------------------------------------------------------P 146 (259)
T ss_pred CCCEEEEEeCcccCCCC--------------------------------------------------------------C
Confidence 33589999986543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecC
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGT 268 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~ 268 (492)
....|+.||+..+.+.+.. ..++.+..+.|+.|-.+
T Consensus 147 ~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 147 PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence 2357999999888887755 35799999999887654
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.3e-11 Score=115.72 Aligned_cols=220 Identities=15% Similarity=0.114 Sum_probs=135.8
Q ss_pred cCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++||||++ -||+.+++.|++.|+. |++..|+.+ ..+.+. ++ ..+ ..++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~---vil~~r~~~---~~~~~~-~~---------~~~---------~~~~ 58 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDK---LKGRVE-EF---------AAQ---------LGSD 58 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCE---EEEEecchh---HHHHHH-HH---------Hhc---------cCCc
Confidence 6789999999985 8999999999999964 466666521 111111 11 111 1235
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc------------chhHHHHHHHhHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF------------DERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a 148 (492)
..+.+|+++ .+..+.++ .++|++||+||.... .+.++..+++|+.|...+.+.+
T Consensus 59 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 131 (262)
T PRK07984 59 IVLPCDVAE-------DASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKAC 131 (262)
T ss_pred eEeecCCCC-------HHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHH
Confidence 678899995 33333333 358999999986421 1345677899999998888877
Q ss_pred Hhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 149 KKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 149 ~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
..+. .-.++|.+||...... .
T Consensus 132 ~~~~~~~g~Iv~iss~~~~~~---------~------------------------------------------------- 153 (262)
T PRK07984 132 RSMLNPGSALLTLSYLGAERA---------I------------------------------------------------- 153 (262)
T ss_pred HHHhcCCcEEEEEecCCCCCC---------C-------------------------------------------------
Confidence 5532 1147888887542210 0
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..+.+.+.. ..++.+..|-|+.|-.+.....+ ........... . .+
T Consensus 154 ----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~-------~~~~~~~~~~~-~---~p--- 215 (262)
T PRK07984 154 ----PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-------DFRKMLAHCEA-V---TP--- 215 (262)
T ss_pred ----CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCC-------chHHHHHHHHH-c---CC---
Confidence 12347999999999888755 35899999999988654221000 00011111100 0 01
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+||+++++.++....... . +.++.+.++
T Consensus 216 --~~r~~~pedva~~~~~L~s~~~~~i-t-G~~i~vdgg 250 (262)
T PRK07984 216 --IRRTVTIEDVGNSAAFLCSDLSAGI-S-GEVVHVDGG 250 (262)
T ss_pred --CcCCCCHHHHHHHHHHHcCcccccc-c-CcEEEECCC
Confidence 1135677999999998876432221 1 666766655
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.7e-11 Score=116.01 Aligned_cols=220 Identities=20% Similarity=0.142 Sum_probs=136.0
Q ss_pred cCCCEEEEeCC--cchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGA--TGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGa--tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++|||| ++-||..++++|++.|. +|++..|+... ...+.+. ++. ..++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~---~v~l~~r~~~~-~~~~~~~-------------~~~--------~~~~ 59 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGA---EVVLTGFGRAL-RLTERIA-------------KRL--------PEPA 59 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCC---EEEEecCccch-hHHHHHH-------------Hhc--------CCCC
Confidence 57899999999 89999999999999996 55777775421 1111111 111 1356
Q ss_pred EEEecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccC-------cc----hhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTN-------FD----ERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~-------~~----~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
.++.+|++++ +..+.+ ..++|++||+||... +. +.+...+++|+.|+..+.+.+.
T Consensus 60 ~~~~~Dv~~~-------~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 132 (256)
T PRK07889 60 PVLELDVTNE-------EHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALL 132 (256)
T ss_pred cEEeCCCCCH-------HHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 7889999953 333232 246999999999752 11 3456679999999998888776
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... .-.++|++|+....+ .
T Consensus 133 ~~m~~~g~Iv~is~~~~~~----------~-------------------------------------------------- 152 (256)
T PRK07889 133 PLMNEGGSIVGLDFDATVA----------W-------------------------------------------------- 152 (256)
T ss_pred HhcccCceEEEEeeccccc----------C--------------------------------------------------
Confidence 421 223677776431110 0
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..|+.+..+.|+.|-.+.....+++ ......+.. . .+.
T Consensus 153 ---~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~-~---~p~--- 215 (256)
T PRK07889 153 ---PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-------ELLEEGWDE-R---APL--- 215 (256)
T ss_pred ---CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-------HHHHHHHHh-c---Ccc---
Confidence 12346899999988877654 4589999999999876543222110 011101100 0 000
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+...+|+|++++.++....... . +.++.+.++
T Consensus 216 -~~~~~~p~evA~~v~~l~s~~~~~~-t-G~~i~vdgg 250 (256)
T PRK07889 216 -GWDVKDPTPVARAVVALLSDWFPAT-T-GEIVHVDGG 250 (256)
T ss_pred -ccccCCHHHHHHHHHHHhCcccccc-c-ceEEEEcCc
Confidence 0124678999999998886432221 1 667776654
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.9e-12 Score=110.74 Aligned_cols=224 Identities=14% Similarity=0.051 Sum_probs=152.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
...++-|+.||.|++++..-...+..| -.|.|+...+. + +.....+.++.|
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~sv---gilsen~~k~~-l-------------------------~sw~~~vswh~g 103 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSV---GILSENENKQT-L-------------------------SSWPTYVSWHRG 103 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceee---eEeecccCcch-h-------------------------hCCCcccchhhc
Confidence 468899999999999999999888655 78888866321 1 112366777888
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM 172 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~ 172 (492)
|.... +.....+.++..++-+++-. .+...+.++|-....+-.++|++. ++++|+|+|.....-.
T Consensus 104 nsfss-------n~~k~~l~g~t~v~e~~ggf---gn~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d~~~~---- 168 (283)
T KOG4288|consen 104 NSFSS-------NPNKLKLSGPTFVYEMMGGF---GNIILMDRINGTANINAVKAAAKA-GVPRFVYISAHDFGLP---- 168 (283)
T ss_pred ccccc-------CcchhhhcCCcccHHHhcCc---cchHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhhcCCC----
Confidence 87632 22234557888888888743 234566788888888889999998 9999999996322110
Q ss_pred eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHhc
Q 037479 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLK 252 (492)
Q Consensus 173 i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 252 (492)
...+..|..+|..||.-+.+.
T Consensus 169 ----------------------------------------------------------~~i~rGY~~gKR~AE~Ell~~- 189 (283)
T KOG4288|consen 169 ----------------------------------------------------------PLIPRGYIEGKREAEAELLKK- 189 (283)
T ss_pred ----------------------------------------------------------CccchhhhccchHHHHHHHHh-
Confidence 023568999999999988765
Q ss_pred CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCce---eeEEecCCCcccceeehhhhhhHHHHHHHhhhcCC
Q 037479 253 ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGR---LTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQP 329 (492)
Q Consensus 253 ~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~ 329 (492)
.+++-.|+||+.|||.+. ..|--..+..+...+....++. +..++.-+......|+|++||.+.+.++.++ .
T Consensus 190 ~~~rgiilRPGFiyg~R~--v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp-~-- 264 (283)
T KOG4288|consen 190 FRFRGIILRPGFIYGTRN--VGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDP-D-- 264 (283)
T ss_pred cCCCceeeccceeecccc--cCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCC-C--
Confidence 348889999999999943 3332222222223333333333 3345666778889999999999999988742 1
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHH
Q 037479 330 SDVNNIYQVGSSLRNPLIYTNLQDYAY 356 (492)
Q Consensus 330 ~~~~~iy~i~~~~~~~~t~~e~~~~~~ 356 (492)
|- .++++.++.++..
T Consensus 265 ------f~------Gvv~i~eI~~~a~ 279 (283)
T KOG4288|consen 265 ------FK------GVVTIEEIKKAAH 279 (283)
T ss_pred ------cC------ceeeHHHHHHHHH
Confidence 22 2567777766544
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.6e-11 Score=128.40 Aligned_cols=164 Identities=17% Similarity=0.190 Sum_probs=116.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.++|+++||||++.||..++++|++.|+ +|+++.|+.... +.+. ++ +..++..
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~---~~~~-------------~~--------~~~~~~~ 55 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGD---QVVVADRNVERA---RERA-------------DS--------LGPDHHA 55 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHH-------------HH--------hCCceeE
Confidence 3689999999999999999999999996 557777864321 1111 11 1245678
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN-----F----DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
+.+|+++ ++..+.++ .++|++||+||... + .+.++..+++|+.|+..+++++....
T Consensus 56 ~~~D~~~-------~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (520)
T PRK06484 56 LAMDVSD-------EAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMI 128 (520)
T ss_pred EEeccCC-------HHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999995 33333333 36999999998631 1 24577889999999999988876531
Q ss_pred --cc-eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 153 --KL-IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 153 --~~-~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
+- .++|++||.......
T Consensus 129 ~~~~g~~iv~isS~~~~~~~------------------------------------------------------------ 148 (520)
T PRK06484 129 EQGHGAAIVNVASGAGLVAL------------------------------------------------------------ 148 (520)
T ss_pred hcCCCCeEEEECCcccCCCC------------------------------------------------------------
Confidence 22 379999985433211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
.....|+.||+..+.+++.. ..+++++.+.|+.|-.+.
T Consensus 149 --~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~ 191 (520)
T PRK06484 149 --PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191 (520)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence 12357999999999987654 347999999999886554
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.4e-11 Score=118.09 Aligned_cols=125 Identities=15% Similarity=0.103 Sum_probs=85.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhC-CCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQ-PNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g-~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+++++||||||.||.+++++|++.| + +|+++.|+... .+.+..+ +.. ...++..+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~---~V~l~~r~~~~---~~~~~~~---------l~~---------~~~~~~~~ 58 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW---HVIMACRDFLK---AEQAAKS---------LGM---------PKDSYTIM 58 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC---EEEEEeCCHHH---HHHHHHH---------hcC---------CCCeEEEE
Confidence 6899999999999999999999998 5 55788876432 1111111 100 02457788
Q ss_pred ecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHh----c
Q 037479 91 PGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKK----C 151 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~----~ 151 (492)
.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.. .
T Consensus 59 ~~Dl~~~-------~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~ 131 (314)
T TIGR01289 59 HLDLGSL-------DSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNS 131 (314)
T ss_pred EcCCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhC
Confidence 9999953 3332222 469999999996421 145677899999998888776543 2
Q ss_pred c-cceeEEEeeeceeec
Q 037479 152 A-KLIVLVHVSTAFVWG 167 (492)
Q Consensus 152 ~-~~~~~V~vST~~v~~ 167 (492)
+ +-.++|++||...+.
T Consensus 132 ~~~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 132 PNKDKRLIIVGSITGNT 148 (314)
T ss_pred CCCCCeEEEEecCcccc
Confidence 1 135899999976653
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.2e-10 Score=115.11 Aligned_cols=231 Identities=16% Similarity=0.150 Sum_probs=132.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.+..+|||+||||.+|+-+++.|+++|+. |++++|+...... ++. .+ ........
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~---vra~VRd~~~a~~-------~~~--~~-------------~~d~~~~~ 131 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFS---VRALVRDEQKAED-------LLG--VF-------------FVDLGLQN 131 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCe---eeeeccChhhhhh-------hhc--cc-------------ccccccce
Confidence 45579999999999999999999999964 5899998654321 111 00 00133444
Q ss_pred EecCCCCCCCCCCchhhHHHhcc----CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 90 VPGDITREDLGVKDSNLREEMWN----KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~----~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
+..|... ..+....+.+ ...+++-|++-..-.++...-.++...|+.+++++|+.+ ++++||++|+...
T Consensus 132 v~~~~~~------~~d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~ 204 (411)
T KOG1203|consen 132 VEADVVT------AIDILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGG 204 (411)
T ss_pred eeecccc------ccchhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecC
Confidence 4444443 2233333333 234666666543322212233567889999999999998 9999999987543
Q ss_pred ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 166 WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 166 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
.-... +++ - . .....+-.+|.++|
T Consensus 205 ~~~~~------~~~-------------~-----~--------------------------------~~~~~~~~~k~~~e 228 (411)
T KOG1203|consen 205 TKFNQ------PPN-------------I-----L--------------------------------LLNGLVLKAKLKAE 228 (411)
T ss_pred cccCC------Cch-------------h-----h--------------------------------hhhhhhhHHHHhHH
Confidence 32110 000 0 0 00123447889999
Q ss_pred HHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 246 MFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 246 ~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
+.+.+ ++++.+||||+.-.-....-.+--+. ..... ...+...-.|+-.++|+..+.++...
T Consensus 229 ~~~~~--Sgl~ytiIR~g~~~~~~~~~~~~~~~--------------~~~~~--~~~~~~~~~i~r~~vael~~~all~~ 290 (411)
T KOG1203|consen 229 KFLQD--SGLPYTIIRPGGLEQDTGGQREVVVD--------------DEKEL--LTVDGGAYSISRLDVAELVAKALLNE 290 (411)
T ss_pred HHHHh--cCCCcEEEeccccccCCCCcceeccc--------------Ccccc--ccccccceeeehhhHHHHHHHHHhhh
Confidence 99987 89999999998754322210000000 00000 11111113688889999998888754
Q ss_pred hcCCCCCCcEEEecCCCCCcccHH
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYT 349 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~ 349 (492)
.... ..+..++.....|-++.
T Consensus 291 ~~~~---~k~~~~v~~~~gpg~~~ 311 (411)
T KOG1203|consen 291 AATF---KKVVELVLKPEGPGRPY 311 (411)
T ss_pred hhcc---ceeEEeecCCCCCCccH
Confidence 3222 23444444333344433
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.7e-11 Score=112.48 Aligned_cols=164 Identities=18% Similarity=0.148 Sum_probs=109.4
Q ss_pred EEEEeCCcchhhHHHHHHHHh----hCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 14 TILVTGATGFLAKIFVEKILR----VQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~----~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.++||||||.||.+++++|++ .|. +|+++.|+... .+.+.+ .++...+ ..++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~---~V~~~~r~~~~---~~~~~~---------~l~~~~~-------~~~v~~ 59 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS---VLVLSARNDEA---LRQLKA---------EIGAERS-------GLRVVR 59 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc---EEEEEEcCHHH---HHHHHH---------HHHhcCC-------CceEEE
Confidence 589999999999999999997 574 56888886432 111111 1111111 146788
Q ss_pred EecCCCCCCCCCCchhhHHHhccC-----------ccEEEEcccccC-----c-----chhHHHHHHHhHHHHHHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEMWNK-----------LDVVINLAATTN-----F-----DERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~-----------vd~Vih~Aa~~~-----~-----~~~~~~~~~~Nv~gt~~ll~~a 148 (492)
+.+|+++ .+..+.+++. .|++||+||... + .+.++..+++|+.|+..+.+.+
T Consensus 60 ~~~Dl~~-------~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~ 132 (256)
T TIGR01500 60 VSLDLGA-------EAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSV 132 (256)
T ss_pred EEeccCC-------HHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHH
Confidence 9999994 3333333321 269999999632 1 1345778999999998887766
Q ss_pred Hhcc----c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhh
Q 037479 149 KKCA----K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDL 223 (492)
Q Consensus 149 ~~~~----~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (492)
.... + -.++|++||.......
T Consensus 133 ~~~l~~~~~~~~~iv~isS~~~~~~~------------------------------------------------------ 158 (256)
T TIGR01500 133 LKAFKDSPGLNRTVVNISSLCAIQPF------------------------------------------------------ 158 (256)
T ss_pred HHHHhhcCCCCCEEEEECCHHhCCCC------------------------------------------------------
Confidence 5421 1 2479999986433111
Q ss_pred hccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecC
Q 037479 224 GIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGT 268 (492)
Q Consensus 224 ~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~ 268 (492)
.....|+.||+..+.+.+.. ..++.+..+.|+.|-.+
T Consensus 159 --------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 159 --------KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 12357999999999888764 35799999999988654
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.2e-10 Score=102.03 Aligned_cols=124 Identities=22% Similarity=0.274 Sum_probs=90.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++||||+|-||..++++|+++|. .+|+++.|+ ...++.. ++ ...++.. ..++.++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~----~~~~~~~-~l-----~~~l~~~---------~~~~~~~~~ 59 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA--RVVILTSRS----EDSEGAQ-EL-----IQELKAP---------GAKITFIEC 59 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESS----CHHHHHH-HH-----HHHHHHT---------TSEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeec----ccccccc-cc-----ccccccc---------ccccccccc
Confidence 6899999999999999999999964 467888887 1122222 11 1112211 378899999
Q ss_pred CCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 93 DITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
|+++ .+..+.++ ..+|++||+||.... .+.+...+++|+.+...+.+++.. .+-.++|
T Consensus 60 D~~~-------~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv 131 (167)
T PF00106_consen 60 DLSD-------PESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIV 131 (167)
T ss_dssp ETTS-------HHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEE
T ss_pred cccc-------cccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceE
Confidence 9994 43333433 368999999998752 255778999999999999999888 4667899
Q ss_pred Eeeecee
Q 037479 159 HVSTAFV 165 (492)
Q Consensus 159 ~vST~~v 165 (492)
++||...
T Consensus 132 ~~sS~~~ 138 (167)
T PF00106_consen 132 NISSIAG 138 (167)
T ss_dssp EEEEGGG
T ss_pred Eecchhh
Confidence 9998543
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.7e-10 Score=113.28 Aligned_cols=175 Identities=14% Similarity=0.086 Sum_probs=112.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC----HHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS----ATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~----~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
+++|+++||||++.||..++++|++.|. +|++..|+..... ..+++. ++ -+.+.. ...
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~-~~-----~~~l~~---------~~~ 67 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGA---TVYVTGRSTRARRSEYDRPETIE-ET-----AELVTA---------AGG 67 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecccccccccccccchHH-HH-----HHHHHh---------cCC
Confidence 5789999999999999999999999996 5578888643210 011111 00 001111 024
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcc-ccc-------Cc----chhHHHHHHHhHHHHHHHHH
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLA-ATT-------NF----DERYDVALDLNTFGAKHVLN 146 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~A-a~~-------~~----~~~~~~~~~~Nv~gt~~ll~ 146 (492)
++.++.+|++++ +..+.++ ..+|++||+| +.. .+ .+.+...+++|+.|+..+++
T Consensus 68 ~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 140 (305)
T PRK08303 68 RGIAVQVDHLVP-------EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSH 140 (305)
T ss_pred ceEEEEcCCCCH-------HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHH
Confidence 577899999953 3333332 3689999999 632 11 13456678999999988887
Q ss_pred HHHhcc---cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhh
Q 037479 147 FSKKCA---KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDL 223 (492)
Q Consensus 147 ~a~~~~---~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (492)
++.... +-.++|.+||....-... .+
T Consensus 141 ~~lp~m~~~~~g~IV~isS~~~~~~~~------~~--------------------------------------------- 169 (305)
T PRK08303 141 FALPLLIRRPGGLVVEITDGTAEYNAT------HY--------------------------------------------- 169 (305)
T ss_pred HHHHHhhhCCCcEEEEECCccccccCc------CC---------------------------------------------
Confidence 775421 124789998843211000 00
Q ss_pred hccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecC
Q 037479 224 GIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGT 268 (492)
Q Consensus 224 ~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~ 268 (492)
.....|+.||+..+.+.+.. ..++.+..|.|+.|-.+
T Consensus 170 --------~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 170 --------RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred --------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 11246999999988887644 35799999999887544
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.8e-10 Score=104.59 Aligned_cols=201 Identities=17% Similarity=0.180 Sum_probs=127.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.+|+.||||||++.+|+.++.++++.|. ++.+-...+++.....+. + ++ ..++..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~---~~vl~Din~~~~~etv~~---~---------~~----------~g~~~~ 90 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA---KLVLWDINKQGNEETVKE---I---------RK----------IGEAKA 90 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC---eEEEEeccccchHHHHHH---H---------Hh----------cCceeE
Confidence 4689999999999999999999999995 445666655443221111 1 00 025889
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----HhcccceeEE
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKCAKLIVLV 158 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~V 158 (492)
+.+|+++++=--.-.+.+++-..++|++||.||.+.. ++..+..+++|+.|.....++- .+. +-.++|
T Consensus 91 y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV 169 (300)
T KOG1201|consen 91 YTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIV 169 (300)
T ss_pred EEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEE
Confidence 9999996420000011112223479999999998753 3567889999999977765543 332 335788
Q ss_pred EeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHH
Q 037479 159 HVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238 (492)
Q Consensus 159 ~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~ 238 (492)
-++|+.-.... ...-.|+
T Consensus 170 ~IaS~aG~~g~--------------------------------------------------------------~gl~~Yc 187 (300)
T KOG1201|consen 170 TIASVAGLFGP--------------------------------------------------------------AGLADYC 187 (300)
T ss_pred EehhhhcccCC--------------------------------------------------------------ccchhhh
Confidence 88884322111 1235799
Q ss_pred HHHHHHHHHHHHh--------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 239 FTKVMGEMFIEHL--------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 239 ~sK~~aE~~v~~~--------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
.||+.+.-.-+.. ..+++++.+-|..+=... +.+ ...-......++
T Consensus 188 aSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm-----------------f~~---------~~~~~~l~P~L~ 241 (300)
T KOG1201|consen 188 ASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM-----------------FDG---------ATPFPTLAPLLE 241 (300)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc-----------------cCC---------CCCCccccCCCC
Confidence 9998875443322 457899999887654211 100 001123346788
Q ss_pred hhhhhhHHHHHHHh
Q 037479 311 ADMVVNAIVVAVVA 324 (492)
Q Consensus 311 vddva~~ii~~~~~ 324 (492)
.+.||+.|+.++..
T Consensus 242 p~~va~~Iv~ai~~ 255 (300)
T KOG1201|consen 242 PEYVAKRIVEAILT 255 (300)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999874
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.9e-10 Score=104.68 Aligned_cols=163 Identities=17% Similarity=0.110 Sum_probs=108.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||++-||+.++.+|++.|. +|++..|+.+. .+.+.++ +++. ..++..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~---~V~~~~r~~~~---l~~~~~~---------i~~~---------~~~~~~ 58 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGA---TLILCDQDQSA---LKDTYEQ---------CSAL---------TDNVYS 58 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHHHH---------HHhc---------CCCeEE
Confidence 4689999999999999999999999996 45777775432 1111111 1110 245677
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------c-CccEEEEcccccC----cc----hhHHHHHHHhHHHHHHHHHHHHh-c-
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------N-KLDVVINLAATTN----FD----ERYDVALDLNTFGAKHVLNFSKK-C- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~-~vd~Vih~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (492)
+.+|++++ +..+.++ . .+|++||+||... +. +.+...+++|+.++..+++.+.. +
T Consensus 59 ~~~D~~~~-------~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~ 131 (227)
T PRK08862 59 FQLKDFSQ-------ESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMR 131 (227)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 88999853 3333322 3 6999999997432 11 24455678898888777665433 2
Q ss_pred --ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 152 --AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 152 --~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
++-..+|++||....
T Consensus 132 ~~~~~g~Iv~isS~~~~--------------------------------------------------------------- 148 (227)
T PRK08862 132 KRNKKGVIVNVISHDDH--------------------------------------------------------------- 148 (227)
T ss_pred hcCCCceEEEEecCCCC---------------------------------------------------------------
Confidence 112478999874211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecC
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGT 268 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~ 268 (492)
.....|+.||+..+.+.+.. ..++.+..|.|+.|-..
T Consensus 149 --~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 149 --QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 01246999999888777654 45899999999987765
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1e-09 Score=104.43 Aligned_cols=170 Identities=15% Similarity=0.180 Sum_probs=105.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++||||++.||+.++++|.+ |. +|+++.|+... .+.+.++ +++. + ..++..+.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~---~Vil~~r~~~~---~~~~~~~---------l~~~-~-------~~~~~~~~~ 56 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE---DVVLAARRPEA---AQGLASD---------LRQR-G-------ATSVHVLSF 56 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC---EEEEEeCCHHH---HHHHHHH---------HHhc-c-------CCceEEEEc
Confidence 6899999999999999999985 74 56888886432 1222111 1111 0 134788999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHH----hcccceeEEEee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSK----KCAKLIVLVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~----~~~~~~~~V~vS 161 (492)
|+++++-.-.-.+...+...++|++||+||..... +.......+|+.+...+++.+. +...-.++|++|
T Consensus 57 Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~is 136 (246)
T PRK05599 57 DAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFS 136 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99954311000011111224799999999975321 1234556788888876665442 221124799999
Q ss_pred eceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHH
Q 037479 162 TAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241 (492)
Q Consensus 162 T~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK 241 (492)
|....-.. .....|+.||
T Consensus 137 S~~~~~~~--------------------------------------------------------------~~~~~Y~asK 154 (246)
T PRK05599 137 SIAGWRAR--------------------------------------------------------------RANYVYGSTK 154 (246)
T ss_pred ccccccCC--------------------------------------------------------------cCCcchhhHH
Confidence 85432111 1234799999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeCCceecC
Q 037479 242 VMGEMFIEHL-----KENMSVAIVRPTIITGT 268 (492)
Q Consensus 242 ~~aE~~v~~~-----~~~~~~~ivRPs~v~g~ 268 (492)
+..+.+.+.. ..++.+..+.|+.|..+
T Consensus 155 aa~~~~~~~la~el~~~~I~v~~v~PG~v~T~ 186 (246)
T PRK05599 155 AGLDAFCQGLADSLHGSHVRLIIARPGFVIGS 186 (246)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence 8887777654 35799999999988654
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.2e-09 Score=95.97 Aligned_cols=126 Identities=21% Similarity=0.242 Sum_probs=84.7
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC-CCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA-DAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~-~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
+++||||+|-||..+++.|.+++. .+|+++.|+. ......+.+. .+++. ..+|.++.+
T Consensus 2 tylitGG~gglg~~la~~La~~~~--~~~il~~r~~~~~~~~~~~i~----------~l~~~---------g~~v~~~~~ 60 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA--RRLILLGRSGAPSAEAEAAIR----------ELESA---------GARVEYVQC 60 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHH----------HHHHT---------T-EEEEEE-
T ss_pred EEEEECCccHHHHHHHHHHHHcCC--CEEEEeccCCCccHHHHHHHH----------HHHhC---------CCceeeecc
Confidence 789999999999999999999884 6899999983 3333332222 22221 367999999
Q ss_pred CCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 93 DITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
|++ +++.+..+++ .++.|||+|+.... .+.+...+..-+.|+.+|.++.... .++.||
T Consensus 61 Dv~-------d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i 132 (181)
T PF08659_consen 61 DVT-------DPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFI 132 (181)
T ss_dssp -TT-------SHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEE
T ss_pred Ccc-------CHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEE
Confidence 999 5544445542 57899999997642 1446777888999999999999885 888999
Q ss_pred Eeeecee-ecc
Q 037479 159 HVSTAFV-WGE 168 (492)
Q Consensus 159 ~vST~~v-~~~ 168 (492)
..||... .|.
T Consensus 133 ~~SSis~~~G~ 143 (181)
T PF08659_consen 133 LFSSISSLLGG 143 (181)
T ss_dssp EEEEHHHHTT-
T ss_pred EECChhHhccC
Confidence 9998654 444
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.1e-09 Score=108.00 Aligned_cols=120 Identities=14% Similarity=0.078 Sum_probs=80.3
Q ss_pred EEeCCcchhhHHHHHHHHhhC-CCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 16 LVTGATGFLAKIFVEKILRVQ-PNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 16 lITGatGflG~~l~~~Ll~~g-~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
+||||||.||..++++|++.| + +|++..|+... .+.+..++ .. ...++.++.+|+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~---~V~~~~r~~~~---~~~~~~~l---------~~---------~~~~~~~~~~Dl 56 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW---HVVMACRDFLK---AERAAKSA---------GM---------PKDSYTVMHLDL 56 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC---EEEEEeCCHHH---HHHHHHHh---------cC---------CCCeEEEEEecC
Confidence 699999999999999999998 5 45777775321 11111111 00 014678889999
Q ss_pred CCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc---c--c
Q 037479 95 TREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA---K--L 154 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~--~ 154 (492)
++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+..+++.+.... + .
T Consensus 57 ~d-------~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~ 129 (308)
T PLN00015 57 AS-------LDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPS 129 (308)
T ss_pred CC-------HHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCC
Confidence 94 44333332 358999999997421 14567889999999888876654321 2 3
Q ss_pred eeEEEeeeceee
Q 037479 155 IVLVHVSTAFVW 166 (492)
Q Consensus 155 ~~~V~vST~~v~ 166 (492)
.++|++||...+
T Consensus 130 g~IV~vsS~~~~ 141 (308)
T PLN00015 130 KRLIIVGSITGN 141 (308)
T ss_pred CEEEEEeccccc
Confidence 589999996543
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.4e-09 Score=96.87 Aligned_cols=93 Identities=18% Similarity=0.267 Sum_probs=72.3
Q ss_pred CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHH--hccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCC
Q 037479 253 ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAV--GYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPS 330 (492)
Q Consensus 253 ~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~ 330 (492)
.+.+++++|.+.|.|.....+ ..++. .++.|. -.|++++.+.|||+||+++.|..+++++.-
T Consensus 170 ~~~r~~~iR~GvVlG~gGGa~----------~~M~lpF~~g~GG---PlGsG~Q~fpWIHv~DL~~li~~ale~~~v--- 233 (315)
T KOG3019|consen 170 KDVRVALIRIGVVLGKGGGAL----------AMMILPFQMGAGG---PLGSGQQWFPWIHVDDLVNLIYEALENPSV--- 233 (315)
T ss_pred cceeEEEEEEeEEEecCCcch----------hhhhhhhhhccCC---cCCCCCeeeeeeehHHHHHHHHHHHhcCCC---
Confidence 468999999999999877332 12222 222332 348999999999999999999999985332
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCCC
Q 037479 331 DVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWI 365 (492)
Q Consensus 331 ~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~~ 365 (492)
..+.|-+.+ ++.+..|+++.+...+++..+.
T Consensus 234 --~GViNgvAP--~~~~n~Ef~q~lg~aL~Rp~~~ 264 (315)
T KOG3019|consen 234 --KGVINGVAP--NPVRNGEFCQQLGSALSRPSWL 264 (315)
T ss_pred --CceecccCC--CccchHHHHHHHHHHhCCCccc
Confidence 578999999 9999999999999999876544
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.7e-09 Score=102.24 Aligned_cols=178 Identities=21% Similarity=0.239 Sum_probs=119.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|.++||||+.-||+.++++|.+.|. +|+...|+......... ++.. .. ....++..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga---~v~i~~r~~~~~~~~~~---~~~~---------~~------~~~~~~~~ 64 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA---KVVITGRSEERLEETAQ---ELGG---------LG------YTGGKVLA 64 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHH---HHHh---------cC------CCCCeeEE
Confidence 6799999999999999999999999995 66888887543211110 1100 00 00367899
Q ss_pred EecCCCCCCCCCCchhhHHHh-ccCccEEEEcccccCcc--------hhHHHHHHHhHHH-HHHHHHHHHhcc---ccee
Q 037479 90 VPGDITREDLGVKDSNLREEM-WNKLDVVINLAATTNFD--------ERYDVALDLNTFG-AKHVLNFSKKCA---KLIV 156 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa~~~~~--------~~~~~~~~~Nv~g-t~~ll~~a~~~~---~~~~ 156 (492)
+.+|++++.--....+..... ..++|+++|+||..... +.++..+++|+.| +..+.+.|..+. +-..
T Consensus 65 ~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~ 144 (270)
T KOG0725|consen 65 IVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGS 144 (270)
T ss_pred EECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCce
Confidence 999999532100000011111 34699999999976432 5688999999995 666666665542 2236
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
++.+||........ ..+..
T Consensus 145 I~~~ss~~~~~~~~-------------------------------------------------------------~~~~~ 163 (270)
T KOG0725|consen 145 IVNISSVAGVGPGP-------------------------------------------------------------GSGVA 163 (270)
T ss_pred EEEEeccccccCCC-------------------------------------------------------------CCccc
Confidence 77788754332211 12268
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
|+.||+.-+++.+.. ..++++..+-|+.|..+.
T Consensus 164 Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 164 YGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred chhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 999999999998765 468999999999988876
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.1e-09 Score=100.45 Aligned_cols=172 Identities=21% Similarity=0.267 Sum_probs=110.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc-CceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS-EKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~-~~v~ 88 (492)
+.+|+||||||++-||+.++++|++.|.. ++++.|..... ..+.+.... . . .. ..+.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~---v~~~~~~~~~~-~~~~~~~~~---------~-~--------~~~~~~~ 60 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGAR---VVVAARRSEEE-AAEALAAAI---------K-E--------AGGGRAA 60 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCe---EEEEcCCCchh-hHHHHHHHH---------H-h--------cCCCcEE
Confidence 46799999999999999999999998864 46666665432 111111000 0 0 00 3577
Q ss_pred EEecCCCC-CCCCCCchhhHHHhccCccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 89 LVPGDITR-EDLGVKDSNLREEMWNKLDVVINLAATTN----F----DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 89 ~v~gDl~~-~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
....|+++ +.-...-.+.......++|+++|+||... + .+.++..+++|+.|...+.+++.....-+++|.
T Consensus 61 ~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~ 140 (251)
T COG1028 61 AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVN 140 (251)
T ss_pred EEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEE
Confidence 78899994 21000001111112235999999999753 2 256788999999999998885554321128899
Q ss_pred eeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC-CchHH
Q 037479 160 VSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW-PNTYV 238 (492)
Q Consensus 160 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~Y~ 238 (492)
+||.... ... + ...|+
T Consensus 141 isS~~~~-~~~--------------------------------------------------------------~~~~~Y~ 157 (251)
T COG1028 141 ISSVAGL-GGP--------------------------------------------------------------PGQAAYA 157 (251)
T ss_pred ECCchhc-CCC--------------------------------------------------------------CCcchHH
Confidence 9985443 211 1 25799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeCCcee
Q 037479 239 FTKVMGEMFIEHL-----KENMSVAIVRPTIIT 266 (492)
Q Consensus 239 ~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~ 266 (492)
.||+..+.+.... ..|+.+..+-|+.+-
T Consensus 158 ~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 158 ASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 9999988776654 357999999999444
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.03 E-value=5.3e-10 Score=95.46 Aligned_cols=207 Identities=18% Similarity=0.225 Sum_probs=140.4
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.++.|+.|++||+.-.||+.++..|.+.|. +|++..|.+.+. ..|.++.| ..+
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA---~ViAvaR~~a~L----------------~sLV~e~p--------~~I 55 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGA---QVIAVARNEANL----------------LSLVKETP--------SLI 55 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCC---EEEEEecCHHHH----------------HHHHhhCC--------cce
Confidence 467899999999999999999999999994 668998875431 12333322 458
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc---CccEEEEcccccC---c----chhHHHHHHHhHHHHHHHHHHHHhc----cc
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN---KLDVVINLAATTN---F----DERYDVALDLNTFGAKHVLNFSKKC----AK 153 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~---~----~~~~~~~~~~Nv~gt~~ll~~a~~~----~~ 153 (492)
+++.+|++ +.+...+++. .+|..+|.||... | .+..+..+++|+.+..++.+...+. ..
T Consensus 56 ~Pi~~Dls-------~wea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~ 128 (245)
T KOG1207|consen 56 IPIVGDLS-------AWEALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI 128 (245)
T ss_pred eeeEeccc-------HHHHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC
Confidence 99999999 5555555554 5899999999653 2 1455677889999988888874432 01
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
...+|.+||..+.-.- +-
T Consensus 129 ~GaIVNvSSqas~R~~--------------------------------------------------------------~n 146 (245)
T KOG1207|consen 129 KGAIVNVSSQASIRPL--------------------------------------------------------------DN 146 (245)
T ss_pred CceEEEecchhccccc--------------------------------------------------------------CC
Confidence 2368999985433111 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
.+.|..||+.-..+-+.. ..++++..+.|+.|...... ..|.|.-.. ..++. .+| .--|
T Consensus 147 HtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~--dnWSDP~K~-k~mL~--------riP-----l~rF 210 (245)
T KOG1207|consen 147 HTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGR--DNWSDPDKK-KKMLD--------RIP-----LKRF 210 (245)
T ss_pred ceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccc--cccCCchhc-cchhh--------hCc-----hhhh
Confidence 567999998887776543 45799999999999876542 345553211 11111 111 1146
Q ss_pred eehhhhhhHHHHHHHhhh
Q 037479 309 IPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~ 326 (492)
.-||.|+++++..+.+..
T Consensus 211 aEV~eVVnA~lfLLSd~s 228 (245)
T KOG1207|consen 211 AEVDEVVNAVLFLLSDNS 228 (245)
T ss_pred hHHHHHHhhheeeeecCc
Confidence 779999999988887543
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.8e-09 Score=96.70 Aligned_cols=221 Identities=20% Similarity=0.234 Sum_probs=136.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.||++++|||.|.||..+.++|+.+|-. .+.++-|.++ ... +..|++..| ..++.+
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik--~~~i~~~~En-~~a-------------~akL~ai~p-------~~~v~F 59 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIK--VLVIDDSEEN-PEA-------------IAKLQAINP-------SVSVIF 59 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCch--heeehhhhhC-HHH-------------HHHHhccCC-------CceEEE
Confidence 46999999999999999999999998753 3333333332 222 223444444 378999
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcchhHHHHHHHhHHHHHH----HHHHHHhcc-c-cee
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFDERYDVALDLNTFGAKH----VLNFSKKCA-K-LIV 156 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~----ll~~a~~~~-~-~~~ 156 (492)
+.+|+++. ..++..+ ..+|++||.||... +.+++..+.+|+.|..+ .+....+-. + -.-
T Consensus 60 ~~~DVt~~-------~~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGi 131 (261)
T KOG4169|consen 60 IKCDVTNR-------GDLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGI 131 (261)
T ss_pred EEeccccH-------HHHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcE
Confidence 99999952 2222333 46999999999765 56789999999887555 444444322 2 235
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|-+|| |+|-.. . .....
T Consensus 132 IvNmsS--v~GL~P-------~-----------------------------------------------------p~~pV 149 (261)
T KOG4169|consen 132 IVNMSS--VAGLDP-------M-----------------------------------------------------PVFPV 149 (261)
T ss_pred EEEecc--ccccCc-------c-----------------------------------------------------ccchh
Confidence 788998 444321 0 11224
Q ss_pred HHHHHH--------HHHHHHHHhcCCCcEEEEeCCceecCCCCCC---CccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 237 YVFTKV--------MGEMFIEHLKENMSVAIVRPTIITGTYKEPF---PGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 237 Y~~sK~--------~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~---~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
|+.||+ +|...-.+ ++|+.+..+.|+.+-....+.+ .+|.+--..+...+..+.
T Consensus 150 Y~AsKaGVvgFTRSla~~ayy~-~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~-------------- 214 (261)
T KOG4169|consen 150 YAASKAGVVGFTRSLADLAYYQ-RSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP-------------- 214 (261)
T ss_pred hhhcccceeeeehhhhhhhhHh-hcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc--------------
Confidence 555554 44332221 4799999999998766554443 444443222222222211
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCc
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNP 345 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~ 345 (492)
--+..+++..++.+++...+ +.+|-+.++...|
T Consensus 215 --~q~~~~~a~~~v~aiE~~~N-----Gaiw~v~~g~l~~ 247 (261)
T KOG4169|consen 215 --KQSPACCAINIVNAIEYPKN-----GAIWKVDSGSLEP 247 (261)
T ss_pred --cCCHHHHHHHHHHHHhhccC-----CcEEEEecCcEEE
Confidence 23456789999999986332 7899998874444
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.3e-09 Score=103.23 Aligned_cols=133 Identities=20% Similarity=0.168 Sum_probs=90.8
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC-CCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA-DAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~-~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.+.+++++|||||..||...+++|.++| .+|+...|+. ......+++. ++. ...++
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~-------------~~~-------~~~~i 88 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQ-------------KGK-------ANQKI 88 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHH-------------hcC-------CCCce
Confidence 3577999999999999999999999999 4779999986 2222222222 211 13778
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-----hhHHHHHHHhHHHHHHHHHHH----HhcccceeEE
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-----ERYDVALDLNTFGAKHVLNFS----KKCAKLIVLV 158 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a----~~~~~~~~~V 158 (492)
.++.+|+++......-.+.........|+.||.||..... +..+..+.+|..|...+.++. +.. ...|+|
T Consensus 89 ~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV 167 (314)
T KOG1208|consen 89 RVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIV 167 (314)
T ss_pred EEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEE
Confidence 8999999953321111111112234689999999976432 456788999999977766654 443 226999
Q ss_pred Eeeecee
Q 037479 159 HVSTAFV 165 (492)
Q Consensus 159 ~vST~~v 165 (492)
.+||..-
T Consensus 168 ~vsS~~~ 174 (314)
T KOG1208|consen 168 NVSSILG 174 (314)
T ss_pred EEcCccc
Confidence 9999654
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.9e-09 Score=100.14 Aligned_cols=241 Identities=12% Similarity=0.069 Sum_probs=135.8
Q ss_pred cCCCEEEEeCC--cchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGA--TGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGa--tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
++||+++|||| +.-||..+++.|.+.|. +|++ .|.... .+++.+++.. ..++.++.... ....+..
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga---~Vv~-~~~~~~---l~~~~~~~~~-~~~~~~~~~~~----~~~~~~~ 74 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA---EILV-GTWVPA---LNIFETSLRR-GKFDESRKLPD----GSLMEIT 74 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC---EEEE-EeCcch---hhHHHHhhhc-cccchhhhccc----ccccCcC
Confidence 78999999999 79999999999999996 4455 564332 2222212211 01111110000 0001224
Q ss_pred EEEecCC--CCCC-CCC----------CchhhHHHhc-------cCccEEEEcccccC-----c----chhHHHHHHHhH
Q 037479 88 TLVPGDI--TRED-LGV----------KDSNLREEMW-------NKLDVVINLAATTN-----F----DERYDVALDLNT 138 (492)
Q Consensus 88 ~~v~gDl--~~~~-lgl----------~~~~~~~~~~-------~~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv 138 (492)
..+.+|+ ++++ +-- ++.+..+.++ .++|++||+||... + .+.++..+++|+
T Consensus 75 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~ 154 (303)
T PLN02730 75 KVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASS 154 (303)
T ss_pred eeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHh
Confidence 5688888 3222 000 0111222222 36899999996421 1 256788899999
Q ss_pred HHHHHHHHHHHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHH
Q 037479 139 FGAKHVLNFSKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAIT 217 (492)
Q Consensus 139 ~gt~~ll~~a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (492)
.|+..+++.+.... .--++|++||....... |
T Consensus 155 ~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~---------p-------------------------------------- 187 (303)
T PLN02730 155 YSFVSLLQHFGPIMNPGGASISLTYIASERII---------P-------------------------------------- 187 (303)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEechhhcCCC---------C--------------------------------------
Confidence 99999988876532 11479999985332110 0
Q ss_pred HHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----c-CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc
Q 037479 218 LAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----K-ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG 291 (492)
Q Consensus 218 ~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~-~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~ 291 (492)
.....|+.||+..+.+.+.. . .++++..|-|+.|-.+.....+ + .........
T Consensus 188 --------------~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~-~------~~~~~~~~~ 246 (303)
T PLN02730 188 --------------GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIG-F------IDDMIEYSY 246 (303)
T ss_pred --------------CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccc-c------cHHHHHHHH
Confidence 11236999999998887654 2 4799999999888665432111 0 001110000
Q ss_pred CceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 292 KGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 292 ~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
. . .+ ...+...++++++++.++........ +.++.+.++
T Consensus 247 ~-~---~p-----l~r~~~peevA~~~~fLaS~~a~~it--G~~l~vdGG 285 (303)
T PLN02730 247 A-N---AP-----LQKELTADEVGNAAAFLASPLASAIT--GATIYVDNG 285 (303)
T ss_pred h-c---CC-----CCCCcCHHHHHHHHHHHhCccccCcc--CCEEEECCC
Confidence 0 0 01 01235679999999988863322211 667777665
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.9e-08 Score=87.77 Aligned_cols=227 Identities=16% Similarity=0.170 Sum_probs=140.8
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
+.+-.+.+..+||||+.-||++++..|.+.|..| .+..+...... +... .+ |. ..
T Consensus 8 ~~~r~~sk~~~vtGg~sGIGrAia~~la~~Garv---~v~dl~~~~A~--ata~-~L-------------~g------~~ 62 (256)
T KOG1200|consen 8 VVQRLMSKVAAVTGGSSGIGRAIAQLLAKKGARV---AVADLDSAAAE--ATAG-DL-------------GG------YG 62 (256)
T ss_pred HHHHHhcceeEEecCCchHHHHHHHHHHhcCcEE---EEeecchhhHH--HHHh-hc-------------CC------CC
Confidence 4555677899999999999999999999999744 55555443221 1111 11 10 02
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 86 KITLVPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
....+.+|++++. ..+.. +..+++++||||+.+. .+.|+..+.+|+.|+..+.+++.+.
T Consensus 63 ~h~aF~~DVS~a~-------~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~ 135 (256)
T KOG1200|consen 63 DHSAFSCDVSKAH-------DVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRA 135 (256)
T ss_pred ccceeeeccCcHH-------HHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHH
Confidence 4456789999543 22232 2369999999998764 3678999999999999998887654
Q ss_pred --c-cce--eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 152 --A-KLI--VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 152 --~-~~~--~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
. +.+ ++|.+||. .|.-. .+-...|..
T Consensus 136 ~~~~~~~~~sIiNvsSI--VGkiG-N~GQtnYAA---------------------------------------------- 166 (256)
T KOG1200|consen 136 MVMNQQQGLSIINVSSI--VGKIG-NFGQTNYAA---------------------------------------------- 166 (256)
T ss_pred HHHhcCCCceEEeehhh--hcccc-cccchhhhh----------------------------------------------
Confidence 1 222 79999984 33211 111111110
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....-++||..|-.+.+ .++++..+-|+.|-.|..+..| ..++..+....+..
T Consensus 167 -----sK~GvIgftktaArEla~---knIrvN~VlPGFI~tpMT~~mp---------~~v~~ki~~~iPmg--------- 220 (256)
T KOG1200|consen 167 -----SKGGVIGFTKTAARELAR---KNIRVNVVLPGFIATPMTEAMP---------PKVLDKILGMIPMG--------- 220 (256)
T ss_pred -----hcCceeeeeHHHHHHHhh---cCceEeEeccccccChhhhhcC---------HHHHHHHHccCCcc---------
Confidence 112344667777776665 4899999999999988776443 23333333222211
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+=..+++|+.++.++.....-. . +..+.++++
T Consensus 221 r~G~~EevA~~V~fLAS~~ssYi-T-G~t~evtGG 253 (256)
T KOG1200|consen 221 RLGEAEEVANLVLFLASDASSYI-T-GTTLEVTGG 253 (256)
T ss_pred ccCCHHHHHHHHHHHhccccccc-c-ceeEEEecc
Confidence 12236788999888875322211 1 566777665
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.6e-09 Score=97.73 Aligned_cols=211 Identities=16% Similarity=0.180 Sum_probs=137.4
Q ss_pred CCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCCCC
Q 037479 19 GAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITR 96 (492)
Q Consensus 19 Gat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~ 96 (492)
|++ +-||..++++|++.|. +|++..|+.... .+ ..+.+.++.+ ..++.+|+++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga---~V~~~~~~~~~~--~~----------~~~~l~~~~~----------~~~~~~D~~~ 55 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGA---NVILTDRNEEKL--AD----------ALEELAKEYG----------AEVIQCDLSD 55 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTE---EEEEEESSHHHH--HH----------HHHHHHHHTT----------SEEEESCTTS
T ss_pred CCCCCCChHHHHHHHHHHCCC---EEEEEeCChHHH--HH----------HHHHHHHHcC----------CceEeecCcc
Confidence 666 9999999999999995 568888875421 11 1122333322 2359999994
Q ss_pred CCCCCCchhhHHHh-------c-cCccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhcc-ccee
Q 037479 97 EDLGVKDSNLREEM-------W-NKLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSKKCA-KLIV 156 (492)
Q Consensus 97 ~~lgl~~~~~~~~~-------~-~~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~ 156 (492)
++..+.+ . .++|++||+|+.... .+.+...+++|+.+...+++.+.+.. .-.+
T Consensus 56 -------~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs 128 (241)
T PF13561_consen 56 -------EESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGS 128 (241)
T ss_dssp -------HHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEE
T ss_pred -------hHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 4434343 4 678999999987543 14577889999999999999886532 2357
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|++||....... .....
T Consensus 129 ii~iss~~~~~~~--------------------------------------------------------------~~~~~ 146 (241)
T PF13561_consen 129 IINISSIAAQRPM--------------------------------------------------------------PGYSA 146 (241)
T ss_dssp EEEEEEGGGTSBS--------------------------------------------------------------TTTHH
T ss_pred cccccchhhcccC--------------------------------------------------------------ccchh
Confidence 9999986432211 22348
Q ss_pred HHHHHHHHHHHHHHh-----c-CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 237 YVFTKVMGEMFIEHL-----K-ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~-~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
|+.+|+..+.+.+.. . .|+++..|.|+.|..+..... .....+....... ....-+..
T Consensus 147 y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~-------~~~~~~~~~~~~~---------~pl~r~~~ 210 (241)
T PF13561_consen 147 YSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERI-------PGNEEFLEELKKR---------IPLGRLGT 210 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH-------HTHHHHHHHHHHH---------STTSSHBE
T ss_pred hHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcc-------ccccchhhhhhhh---------hccCCCcC
Confidence 999999999998765 5 699999999998875432110 0111122111110 11113468
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+|||++++.++......-. |++..+.+|
T Consensus 211 ~~evA~~v~fL~s~~a~~it--G~~i~vDGG 239 (241)
T PF13561_consen 211 PEEVANAVLFLASDAASYIT--GQVIPVDGG 239 (241)
T ss_dssp HHHHHHHHHHHHSGGGTTGT--SEEEEESTT
T ss_pred HHHHHHHHHHHhCccccCcc--CCeEEECCC
Confidence 99999999999875433222 788888766
|
... |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.9e-08 Score=83.38 Aligned_cols=197 Identities=17% Similarity=0.154 Sum_probs=126.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|.||||-+|+.++++.+++|++| .+++|++..... .+.+.+++.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeV---TAivRn~~K~~~-----------------------------~~~~~i~q~ 48 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEV---TAIVRNASKLAA-----------------------------RQGVTILQK 48 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCee---EEEEeChHhccc-----------------------------cccceeecc
Confidence 689999999999999999999999876 899998754322 156778999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM 172 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~ 172 (492)
|+. +.+.+...+.+.|+||..-+....++ .. ........+++..+.. ++.|++.++.+.+.-
T Consensus 49 Dif-------d~~~~a~~l~g~DaVIsA~~~~~~~~-~~----~~~k~~~~li~~l~~a-gv~RllVVGGAGSL~----- 110 (211)
T COG2910 49 DIF-------DLTSLASDLAGHDAVISAFGAGASDN-DE----LHSKSIEALIEALKGA-GVPRLLVVGGAGSLE----- 110 (211)
T ss_pred ccc-------ChhhhHhhhcCCceEEEeccCCCCCh-hH----HHHHHHHHHHHHHhhc-CCeeEEEEcCccceE-----
Confidence 999 44445577789999998765432221 11 1123367788888887 788999888765442
Q ss_pred eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC-chHHHHHHHHHHH--HH
Q 037479 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP-NTYVFTKVMGEMF--IE 249 (492)
Q Consensus 173 i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-n~Y~~sK~~aE~~--v~ 249 (492)
++|..--. | ...+| ..|...++.+|.+ ++
T Consensus 111 id~g~rLv----------D--------------------------------------~p~fP~ey~~~A~~~ae~L~~Lr 142 (211)
T COG2910 111 IDEGTRLV----------D--------------------------------------TPDFPAEYKPEALAQAEFLDSLR 142 (211)
T ss_pred EcCCceee----------c--------------------------------------CCCCchhHHHHHHHHHHHHHHHh
Confidence 12210000 0 00122 3456677888844 33
Q ss_pred HhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 250 HLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 250 ~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
. ...+.++.+-|+..+-|.... | + +..|.- .+..+. .--+.|...|.|-+++.-+++.
T Consensus 143 ~-~~~l~WTfvSPaa~f~PGerT--g---~----------yrlggD-~ll~n~-~G~SrIS~aDYAiA~lDe~E~~ 200 (211)
T COG2910 143 A-EKSLDWTFVSPAAFFEPGERT--G---N----------YRLGGD-QLLVNA-KGESRISYADYAIAVLDELEKP 200 (211)
T ss_pred h-ccCcceEEeCcHHhcCCcccc--C---c----------eEeccc-eEEEcC-CCceeeeHHHHHHHHHHHHhcc
Confidence 3 345999999999988885431 1 1 011111 111111 1126788888899998888753
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=8.5e-09 Score=97.24 Aligned_cols=165 Identities=19% Similarity=0.275 Sum_probs=111.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
..+|.|||||+-.-+|..|+.+|.+.|..| ++-.-.+.+ .+.++ .+. ..++...
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V---~Agcl~~~g---ae~L~-------------~~~-------~s~rl~t 80 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRV---FAGCLTEEG---AESLR-------------GET-------KSPRLRT 80 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEE---EEEeecCch---HHHHh-------------hhh-------cCCccee
Confidence 457899999999999999999999999754 666633333 22222 110 0367788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHH----HHhcccce
Q 037479 90 VPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNF----SKKCAKLI 155 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~----a~~~~~~~ 155 (492)
+.-|+++++.......+++..++ +.-.|||+||+..+ -+.+...+++|..|+.++... .++.+ .
T Consensus 81 ~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--G 158 (322)
T KOG1610|consen 81 LQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--G 158 (322)
T ss_pred EeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--C
Confidence 89999964321111111111122 46799999996533 156788999999998877554 45543 4
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
|+|.+||. .|... .+...
T Consensus 159 RvVnvsS~--~GR~~------------------------------------------------------------~p~~g 176 (322)
T KOG1610|consen 159 RVVNVSSV--LGRVA------------------------------------------------------------LPALG 176 (322)
T ss_pred eEEEeccc--ccCcc------------------------------------------------------------Ccccc
Confidence 89999983 33221 12456
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCc
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTI 264 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~ 264 (492)
+|+.||+..|...... ..|+.+.|+-|+.
T Consensus 177 ~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~ 210 (322)
T KOG1610|consen 177 PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGF 210 (322)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence 8999999999876543 4699999999983
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.2e-08 Score=89.89 Aligned_cols=121 Identities=18% Similarity=0.276 Sum_probs=84.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.|-+||||||+..||..|++++++.|. +|++..|+. +||.. . +.+ .+.+...
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN---~VIi~gR~e------~~L~e-~---------~~~---------~p~~~t~ 55 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN---TVIICGRNE------ERLAE-A---------KAE---------NPEIHTE 55 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC---EEEEecCcH------HHHHH-H---------Hhc---------Ccchhee
Confidence 478999999999999999999999995 557777763 44441 1 111 2556778
Q ss_pred ecCCCCCCCCCCchhhHHHh----cc---CccEEEEcccccCc---c------hhHHHHHHHhHHHHHHHHHHHHhc--c
Q 037479 91 PGDITREDLGVKDSNLREEM----WN---KLDVVINLAATTNF---D------ERYDVALDLNTFGAKHVLNFSKKC--A 152 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~----~~---~vd~Vih~Aa~~~~---~------~~~~~~~~~Nv~gt~~ll~~a~~~--~ 152 (492)
.+|+. |.+.++++ .+ ..+++||+||+.+- . +....-+.+|..++.+|..+.-.. .
T Consensus 56 v~Dv~-------d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~ 128 (245)
T COG3967 56 VCDVA-------DRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLR 128 (245)
T ss_pred eeccc-------chhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 89998 44433333 33 68999999998642 1 234566899999999988876542 1
Q ss_pred c-ceeEEEeeeceee
Q 037479 153 K-LIVLVHVSTAFVW 166 (492)
Q Consensus 153 ~-~~~~V~vST~~v~ 166 (492)
+ -..+|.|||--.+
T Consensus 129 q~~a~IInVSSGLaf 143 (245)
T COG3967 129 QPEATIINVSSGLAF 143 (245)
T ss_pred CCCceEEEecccccc
Confidence 1 2368899985444
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-07 Score=85.25 Aligned_cols=116 Identities=14% Similarity=0.153 Sum_probs=74.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|+.++|+||||+..||--|+++|++. .++..++...|..... .+.+.. . .....++++
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a--~~~l~~-k------------------~~~d~rvHi 58 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKA--ATELAL-K------------------SKSDSRVHI 58 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHh--hHHHHH-h------------------hccCCceEE
Confidence 34578999999999999999999974 5676666666644332 111110 0 112488999
Q ss_pred EecCCCCCCCCCCchhhHHHh--ccCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEM--WNKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~--~~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
++.|++..+.--...+..+.+ ..+.|++|++||.... ...+-..+++|+.|+..+.+.
T Consensus 59 i~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~ 126 (249)
T KOG1611|consen 59 IQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQA 126 (249)
T ss_pred EEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHH
Confidence 999999633100000111223 2368999999997532 133667899999998776554
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-07 Score=114.38 Aligned_cols=182 Identities=13% Similarity=0.085 Sum_probs=117.9
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC--------HHHHHHHHhhcChhhHHHHHhc----C
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS--------ATVRFHNEIIGKDLFRVLKEKN----G 76 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~--------~~~r~~~~~~~~~~f~~l~~~~----~ 76 (492)
+-+++++|||||+|.||..++++|++++- .+|+++.|+..... ....++..+ ...++... |
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~g--a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~-----~~~l~~~g~~~~P 2066 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQCQ--AHFILAGRSSFDDNEPSWAQGKDENELKKAA-----IQHLQASGEKPTP 2066 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhcC--CEEEEEeCCcccccCchhhhccchHHHHHhh-----hhhhhhccccccc
Confidence 34689999999999999999999998842 36788888731110 011111111 00000000 0
Q ss_pred -----------------Cchh--hhccCceEEEecCCCCCCCCCCchhhHHHhcc------CccEEEEcccccCc-----
Q 037479 77 -----------------THLN--ALISEKITLVPGDITREDLGVKDSNLREEMWN------KLDVVINLAATTNF----- 126 (492)
Q Consensus 77 -----------------~~~~--~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~~~----- 126 (492)
..+. .....++.++.+|+++ .+.+..+++ ++|+|||+||....
T Consensus 2067 ~~i~~~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD-------~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~ 2139 (2582)
T TIGR02813 2067 KKVDALVRPVLSSLEIAQALAAFKAAGASAEYASADVTN-------SVSVAATVQPLNKTLQITGIIHGAGVLADKHIQD 2139 (2582)
T ss_pred chhhhcccccchhHHHHHHHHHHHhcCCcEEEEEccCCC-------HHHHHHHHHHHHHhCCCcEEEECCccCCCCCccc
Confidence 0000 0113568899999994 443433332 58999999997532
Q ss_pred --chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee-ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHH
Q 037479 127 --DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV-WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQEL 203 (492)
Q Consensus 127 --~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v-~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (492)
.+.++..+++|+.|+.++++++... ..++||.+||... +|..
T Consensus 2140 ~t~e~f~~v~~~nv~G~~~Ll~al~~~-~~~~IV~~SSvag~~G~~---------------------------------- 2184 (2582)
T TIGR02813 2140 KTLEEFNAVYGTKVDGLLSLLAALNAE-NIKLLALFSSAAGFYGNT---------------------------------- 2184 (2582)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCCCC----------------------------------
Confidence 2567889999999999999998775 4568999998543 3322
Q ss_pred HHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh---cCCCcEEEEeCCceecC
Q 037479 204 NELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL---KENMSVAIVRPTIITGT 268 (492)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~---~~~~~~~ivRPs~v~g~ 268 (492)
....|+.+|...+.+.... ..++++..+.|+.+-+.
T Consensus 2185 -----------------------------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2185 -----------------------------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred -----------------------------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 1346999998777666544 23588999999877654
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.7e-08 Score=95.72 Aligned_cols=164 Identities=12% Similarity=0.067 Sum_probs=102.0
Q ss_pred HHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCCCCCCCCCCchhhH
Q 037479 28 FVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLR 107 (492)
Q Consensus 28 l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~ 107 (492)
++++|++.|. +|+++.|+..... ...++.+|++ +.+..
T Consensus 1 ~a~~l~~~G~---~Vv~~~r~~~~~~--------------------------------~~~~~~~Dl~-------~~~~v 38 (241)
T PRK12428 1 TARLLRFLGA---RVIGVDRREPGMT--------------------------------LDGFIQADLG-------DPASI 38 (241)
T ss_pred ChHHHHhCCC---EEEEEeCCcchhh--------------------------------hhHhhcccCC-------CHHHH
Confidence 4678888896 5588888654210 0134678998 44444
Q ss_pred HHhcc----CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc-ccceeEEEeeeceeeccccc-ceeccccCCC
Q 037479 108 EEMWN----KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKC-AKLIVLVHVSTAFVWGEESG-MLYESSFKMG 181 (492)
Q Consensus 108 ~~~~~----~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~V~vST~~v~~~~~~-~i~E~~~~~~ 181 (492)
..+++ ++|+|||+||... ..+++..+++|+.|+..+++++.+. ..-.++|++||...++.... ...|....
T Consensus 39 ~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~-- 115 (241)
T PRK12428 39 DAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAA-- 115 (241)
T ss_pred HHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhc--
Confidence 44444 6899999999753 3567888999999999999998763 12258999999877653210 00000000
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh------cCCC
Q 037479 182 DTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL------KENM 255 (492)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~------~~~~ 255 (492)
..+.+.. +. ..-..+......|+.||+..+.+.+.. ..|+
T Consensus 116 -------~~~~~~~------------------------~~---~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~gi 161 (241)
T PRK12428 116 -------TASFDEG------------------------AA---WLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGI 161 (241)
T ss_pred -------cchHHHH------------------------HH---hhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCe
Confidence 0000000 00 000001134478999999998876533 3489
Q ss_pred cEEEEeCCceecCCC
Q 037479 256 SVAIVRPTIITGTYK 270 (492)
Q Consensus 256 ~~~ivRPs~v~g~~~ 270 (492)
++.+++|+.|.++..
T Consensus 162 rvn~v~PG~v~T~~~ 176 (241)
T PRK12428 162 RVNCVAPGPVFTPIL 176 (241)
T ss_pred EEEEeecCCccCccc
Confidence 999999999987753
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.5e-07 Score=87.22 Aligned_cols=202 Identities=17% Similarity=0.165 Sum_probs=129.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
.+|+||||+.-+|+.++..+.++|.+| .++.|+.+......+..+ +. .....|.+..+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~V---ti~ar~~~kl~~a~~~l~-l~------------------~~~~~v~~~S~ 91 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADV---TITARSGKKLLEAKAELE-LL------------------TQVEDVSYKSV 91 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCce---EEEeccHHHHHHHHhhhh-hh------------------hccceeeEecc
Confidence 489999999999999999999999655 889998776544333220 00 01234788999
Q ss_pred CCCCCCCCCCchhhHHHhcc-------CccEEEEcccccC---cc----hhHHHHHHHhHHHHHHHHHHHHh-cccce--
Q 037479 93 DITREDLGVKDSNLREEMWN-------KLDVVINLAATTN---FD----ERYDVALDLNTFGAKHVLNFSKK-CAKLI-- 155 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~---~~----~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~-- 155 (492)
|+. +-+....+++ .+|.+|||||..- |. +..+...++|..||.+++.++.. ++...
T Consensus 92 d~~-------~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~ 164 (331)
T KOG1210|consen 92 DVI-------DYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHL 164 (331)
T ss_pred ccc-------cHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccC
Confidence 996 3333333332 5799999999642 21 44678899999999999887654 32222
Q ss_pred -eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 156 -VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 156 -~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
+++.+||....-.- ...
T Consensus 165 g~I~~vsS~~a~~~i--------------------------------------------------------------~Gy 182 (331)
T KOG1210|consen 165 GRIILVSSQLAMLGI--------------------------------------------------------------YGY 182 (331)
T ss_pred cEEEEehhhhhhcCc--------------------------------------------------------------ccc
Confidence 78888874322110 112
Q ss_pred chHHH----HHHHHHHHHHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVF----TKVMGEMFIEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~----sK~~aE~~v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
++|.. .|.+||.+-++. ..++.++..-|+.+..|+-+- . +...+... .+.. ...+.+
T Consensus 183 saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~------E-n~tkP~~t--------~ii~---g~ss~~ 244 (331)
T KOG1210|consen 183 SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFER------E-NKTKPEET--------KIIE---GGSSVI 244 (331)
T ss_pred cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccc------c-cccCchhe--------eeec---CCCCCc
Confidence 34444 456677776666 468999999998877765321 1 11111111 1111 122558
Q ss_pred ehhhhhhHHHHHHH
Q 037479 310 PADMVVNAIVVAVV 323 (492)
Q Consensus 310 ~vddva~~ii~~~~ 323 (492)
+.+++|.+++.-+.
T Consensus 245 ~~e~~a~~~~~~~~ 258 (331)
T KOG1210|consen 245 KCEEMAKAIVKGMK 258 (331)
T ss_pred CHHHHHHHHHhHHh
Confidence 99999999887765
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.7e-08 Score=87.16 Aligned_cols=165 Identities=16% Similarity=0.122 Sum_probs=110.2
Q ss_pred CCEEEEeC-CcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 12 NKTILVTG-ATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 12 ~~~vlITG-atGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+.||||| ++|.||.+|+.++.+.|+ .|++..|+.+.-... . +..++.+.
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~---~V~AtaR~~e~M~~L----------------~----------~~~gl~~~ 57 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGY---LVYATARRLEPMAQL----------------A----------IQFGLKPY 57 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCe---EEEEEccccchHhhH----------------H----------HhhCCeeE
Confidence 58899998 569999999999999997 458998875432211 1 12567889
Q ss_pred ecCCCCCCCCCCchhhHHH-hccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--ccceeEEEe
Q 037479 91 PGDITREDLGVKDSNLREE-MWNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--AKLIVLVHV 160 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~-~~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~~~~~V~v 160 (492)
..|+++++-...-+..+.. -..+.|+.+|.||.... .+..+..+++|+.|..++.++...+ +.-..+|.+
T Consensus 58 kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnv 137 (289)
T KOG1209|consen 58 KLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNV 137 (289)
T ss_pred EeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEe
Confidence 9999965321100000000 11258999999996431 1445778999999988887776532 112378999
Q ss_pred eeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 161 STAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 161 ST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
.|..++-. +.|...|..|
T Consensus 138 gSl~~~vp--------------------------------------------------------------fpf~~iYsAs 155 (289)
T KOG1209|consen 138 GSLAGVVP--------------------------------------------------------------FPFGSIYSAS 155 (289)
T ss_pred cceeEEec--------------------------------------------------------------cchhhhhhHH
Confidence 98766632 2467899999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeCCceec
Q 037479 241 KVMGEMFIEHL-----KENMSVAIVRPTIITG 267 (492)
Q Consensus 241 K~~aE~~v~~~-----~~~~~~~ivRPs~v~g 267 (492)
|+...+..... ..|++++-+-|+.|-.
T Consensus 156 KAAihay~~tLrlEl~PFgv~Vin~itGGv~T 187 (289)
T KOG1209|consen 156 KAAIHAYARTLRLELKPFGVRVINAITGGVAT 187 (289)
T ss_pred HHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence 99888777654 3466666666655544
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.1e-06 Score=85.83 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=90.7
Q ss_pred cCccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhcc-cceeEEEeeeceeecccccceeccccCCC
Q 037479 112 NKLDVVINLAATTN-----F----DERYDVALDLNTFGAKHVLNFSKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMG 181 (492)
Q Consensus 112 ~~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~ 181 (492)
.++|++||+||... + .+.++..+++|+.|+.++++++.... .-.++|.+||....... |
T Consensus 118 G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~---------p-- 186 (299)
T PRK06300 118 GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAV---------P-- 186 (299)
T ss_pred CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcC---------C--
Confidence 46999999997531 1 14578889999999999999887632 22368888774322110 0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----c-CCC
Q 037479 182 DTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----K-ENM 255 (492)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~-~~~ 255 (492)
.....|+.||+..+.+.+.. . .|+
T Consensus 187 --------------------------------------------------~~~~~Y~asKaAl~~lt~~la~el~~~~gI 216 (299)
T PRK06300 187 --------------------------------------------------GYGGGMSSAKAALESDTKVLAWEAGRRWGI 216 (299)
T ss_pred --------------------------------------------------CccHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 11126999999998877644 2 389
Q ss_pred cEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcE
Q 037479 256 SVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNI 335 (492)
Q Consensus 256 ~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~i 335 (492)
++..|.|+.|-.+...... ........... . .+ .......+++++++...+....... . +.+
T Consensus 217 rVn~V~PG~v~T~~~~~~~-------~~~~~~~~~~~-~---~p-----~~r~~~peevA~~v~~L~s~~~~~i-t-G~~ 278 (299)
T PRK06300 217 RVNTISAGPLASRAGKAIG-------FIERMVDYYQD-W---AP-----LPEPMEAEQVGAAAAFLVSPLASAI-T-GET 278 (299)
T ss_pred EEEEEEeCCccChhhhccc-------ccHHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHhCccccCC-C-CCE
Confidence 9999999987654321100 00011000000 0 00 1124567999999988775322222 1 677
Q ss_pred EEecCC
Q 037479 336 YQVGSS 341 (492)
Q Consensus 336 y~i~~~ 341 (492)
+.+.++
T Consensus 279 i~vdGG 284 (299)
T PRK06300 279 LYVDHG 284 (299)
T ss_pred EEECCC
Confidence 777665
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.56 E-value=7.5e-07 Score=87.24 Aligned_cols=118 Identities=16% Similarity=0.054 Sum_probs=81.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|.||||+|.||+.++..|...+ -+..+.++.+.+ ....... +... .... ..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~-~~g~a~D----l~~~------------------~~~~--~i 71 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIAN-TPGVAAD----VSHI------------------NTPA--QV 71 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCC-CCeeEch----hhhC------------------CcCc--eE
Confidence 3699999999999999999988654 345677777755 1110000 1000 0111 11
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA 163 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~ 163 (492)
.+++. +.+ ....++++|+|||+||..+- .....+.+..|+..++++.+.+++. +.+++|+++|-
T Consensus 72 ~~~~~------~~d-~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSN 136 (323)
T PLN00106 72 RGFLG------DDQ-LGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISN 136 (323)
T ss_pred EEEeC------CCC-HHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCC
Confidence 12221 223 33677999999999998654 3567888999999999999999998 78899999983
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.8e-06 Score=83.11 Aligned_cols=125 Identities=14% Similarity=0.054 Sum_probs=85.2
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
..+.++|.||||+|.||+.++..|...+ ....+.++.+.+..... ..+. +. ...
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~-~~~elvL~Di~~~~g~a-~Dl~---------------------~~-~~~-- 58 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNP-HVSELSLYDIVGAPGVA-ADLS---------------------HI-DTP-- 58 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCC-CCCEEEEEecCCCcccc-cchh---------------------hc-CcC--
Confidence 3567899999999999999999888554 33567777772211100 0110 00 011
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
....+.++ +.+. .+.++++|+||++||...- ..+..+.+..|+.+++++++.+++. +++++|.++|..+..
T Consensus 59 ~~v~~~td------~~~~-~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv 130 (321)
T PTZ00325 59 AKVTGYAD------GELW-EKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNS 130 (321)
T ss_pred ceEEEecC------CCch-HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHH
Confidence 12233332 1221 3667899999999998643 3556788999999999999999998 899999999965554
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=8.3e-07 Score=79.50 Aligned_cols=100 Identities=18% Similarity=0.182 Sum_probs=67.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++|||||||+|. ++.+|++.|++ |.++.|++.. .+.+. ...+. ..++.++.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~---V~v~~R~~~~---~~~l~-------------~~l~~------~~~i~~~~~ 54 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFH---VSVIARREVK---LENVK-------------RESTT------PESITPLPL 54 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCE---EEEEECCHHH---HHHHH-------------HHhhc------CCcEEEEEc
Confidence 57999999999886 99999999974 4677775421 11111 00000 146788999
Q ss_pred CCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccce----eEEEee
Q 037479 93 DITREDLGVKDSNLREEMWN-------KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLI----VLVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~----~~V~vS 161 (492)
|++ +.+....+++ .+|++|+.+ .+.++.++.++|++. +++ +|+|+=
T Consensus 55 Dv~-------d~~sv~~~i~~~l~~~g~id~lv~~v---------------h~~~~~~~~~~~~~~-gv~~~~~~~~h~~ 111 (177)
T PRK08309 55 DYH-------DDDALKLAIKSTIEKNGPFDLAVAWI---------------HSSAKDALSVVCREL-DGSSETYRLFHVL 111 (177)
T ss_pred cCC-------CHHHHHHHHHHHHHHcCCCeEEEEec---------------cccchhhHHHHHHHH-ccCCCCceEEEEe
Confidence 999 4444434433 456666544 345788899999998 788 899965
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.37 E-value=3e-06 Score=80.16 Aligned_cols=171 Identities=15% Similarity=0.153 Sum_probs=112.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
|+-..|||||.-||+..+++|.++|.+ |+++.|.++. ++++.+||.+ ...-.+..+.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~n---vvLIsRt~~K---L~~v~kEI~~-----------------~~~vev~~i~ 105 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFN---VVLISRTQEK---LEAVAKEIEE-----------------KYKVEVRIIA 105 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHHH-----------------HhCcEEEEEE
Confidence 378999999999999999999999974 6999998654 3333333322 1124588899
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---------hhHHHHHHHhHHHHHHHHHHHHhc-c--cceeE
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---------ERYDVALDLNTFGAKHVLNFSKKC-A--KLIVL 157 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---------~~~~~~~~~Nv~gt~~ll~~a~~~-~--~~~~~ 157 (492)
.|+++++- +-+.++..+. ++-++||++|..... +.....+.+|+.++..+.+..... . +-..+
T Consensus 106 ~Dft~~~~---~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~I 182 (312)
T KOG1014|consen 106 IDFTKGDE---VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGII 182 (312)
T ss_pred EecCCCch---hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceE
Confidence 99997642 1122223333 577999999976411 134566778999987777765432 1 22368
Q ss_pred EEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchH
Q 037479 158 VHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTY 237 (492)
Q Consensus 158 V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y 237 (492)
|.+||..-. . +. .-...|
T Consensus 183 vnigS~ag~--~-------p~-----------------------------------------------------p~~s~y 200 (312)
T KOG1014|consen 183 VNIGSFAGL--I-------PT-----------------------------------------------------PLLSVY 200 (312)
T ss_pred EEecccccc--c-------cC-----------------------------------------------------hhHHHH
Confidence 888874311 1 00 123579
Q ss_pred HHHHHHHHHHHH----Hh-cCCCcEEEEeCCceecCCC
Q 037479 238 VFTKVMGEMFIE----HL-KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 238 ~~sK~~aE~~v~----~~-~~~~~~~ivRPs~v~g~~~ 270 (492)
..||+.-+.+-. ++ ..|+-+-.+-|..|.+...
T Consensus 201 sasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 201 SASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence 999986655543 33 4589999999988887654
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.3e-06 Score=78.69 Aligned_cols=164 Identities=21% Similarity=0.222 Sum_probs=104.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.++.+|+||+|--||..++..++..+.++ .+++..|..... +++.+.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~-~r~g~~r~~a~~--------------------------------~~L~v~ 51 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEA-LRYGVARLLAEL--------------------------------EGLKVA 51 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHH-HHHhhhcccccc--------------------------------cceEEE
Confidence 36789999999999999999998877654 233333433221 233333
Q ss_pred ecCCCCCCCCCC-chhhHHHhc-------cCccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhc-
Q 037479 91 PGDITREDLGVK-DSNLREEMW-------NKLDVVINLAATTNF----------DERYDVALDLNTFGAKHVLNFSKKC- 151 (492)
Q Consensus 91 ~gDl~~~~lgl~-~~~~~~~~~-------~~vd~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (492)
.||....--|.. ....+..+. .+-|+|||.||.... .+.++.++++|+.+...+...+...
T Consensus 52 ~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~l 131 (253)
T KOG1204|consen 52 YGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKL 131 (253)
T ss_pred ecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHh
Confidence 333222211111 111111111 158999999997531 2458899999999998887766542
Q ss_pred ccc---eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 152 AKL---IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 152 ~~~---~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
++. +.+|++||....-. |
T Consensus 132 k~~p~~~~vVnvSS~aav~p---------~-------------------------------------------------- 152 (253)
T KOG1204|consen 132 KKSPVNGNVVNVSSLAAVRP---------F-------------------------------------------------- 152 (253)
T ss_pred cCCCccCeEEEecchhhhcc---------c--------------------------------------------------
Confidence 222 56899998554421 1
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh---cC-CCcEEEEeCCceecCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL---KE-NMSVAIVRPTIITGTY 269 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~---~~-~~~~~ivRPs~v~g~~ 269 (492)
.....|+.+|+.-+++++.. .+ ++.+..++|+.|=...
T Consensus 153 ---~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~m 194 (253)
T KOG1204|consen 153 ---SSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQM 194 (253)
T ss_pred ---cHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchh
Confidence 22357999999999988755 33 7889999998876543
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.6e-07 Score=83.39 Aligned_cols=83 Identities=22% Similarity=0.315 Sum_probs=53.1
Q ss_pred cCCCEEEEeCCc----------------chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHH
Q 037479 10 LENKTILVTGAT----------------GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKE 73 (492)
Q Consensus 10 ~~~~~vlITGat----------------GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~ 73 (492)
++||+||||+|. ||+|++|++.|++.|++| +++.+.......
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V---~li~g~~~~~~~------------------- 58 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHV---IYLHGYFAEKPN------------------- 58 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeE---EEEeCCCcCCCc-------------------
Confidence 479999999875 999999999999999865 555543221100
Q ss_pred hcCCchhhhccCceEEEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc
Q 037479 74 KNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD 127 (492)
Q Consensus 74 ~~~~~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~ 127 (492)
.... ..++..+.++.. ..+.+..+++ ++|+|||+||...|.
T Consensus 59 ----~~~~--~~~~~~V~s~~d-------~~~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 59 ----DINN--QLELHPFEGIID-------LQDKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred ----ccCC--ceeEEEEecHHH-------HHHHHHHHhcccCCCEEEECcccccee
Confidence 0000 123445666332 1123345553 689999999997765
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=6.1e-06 Score=73.44 Aligned_cols=85 Identities=14% Similarity=0.171 Sum_probs=57.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++++.++||||+|.+|..++..|++.|. +|++..|+... .+....++ .+ ...++.+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~---~V~l~~r~~~~---~~~~~~~l---------~~---------~~~~~~~ 69 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGA---KVIVTDIDQES---GQATVEEI---------TN---------LGGEALF 69 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 6789999999999999999999999986 45777775421 11111111 10 0134667
Q ss_pred EecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccC
Q 037479 90 VPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTN 125 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~ 125 (492)
+.+|+++ .+....+ +.++|++||+||...
T Consensus 70 ~~~Dl~~-------~~~v~~~v~~~~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 70 VSYDMEK-------QGDWQRVISITLNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 8999984 3322232 247999999999654
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.3e-05 Score=78.94 Aligned_cols=110 Identities=21% Similarity=0.095 Sum_probs=69.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCC----CCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQP----NVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~----~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+|+||||+|++|++++..|+..+- .-..|+++.|++..... +.. ..++. +-..
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~-~g~-----~~Dl~----------------d~~~ 60 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKAL-EGV-----VMELQ----------------DCAF 60 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccc-cce-----eeehh----------------hccc
Confidence 5799999999999999999987542 11267888886532110 000 00000 0000
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+..+|+. ......+.++++|+|||+||..+. .++..+.++.|+.-.+.+.+..+++
T Consensus 61 ~~~~~~~-------~~~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 61 PLLKSVV-------ATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred cccCCce-------ecCCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1122332 112223666899999999998754 3455778999999999998888876
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=5.8e-06 Score=70.91 Aligned_cols=123 Identities=23% Similarity=0.316 Sum_probs=84.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC-HHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS-ATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~-~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+|...+||||..-+|+.-+|+|.++|..| .++.-+.+... ..+. +..++.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv---~lldlp~skg~~vake-------------------------lg~~~v 58 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASV---ALLDLPQSKGADVAKE-------------------------LGGKVV 58 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceE---EEEeCCcccchHHHHH-------------------------hCCceE
Confidence 467889999999999999999999999644 66666544322 2221 247899
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC------cc-------hhHHHHHHHhHHHHHHHHHHH
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN------FD-------ERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~------~~-------~~~~~~~~~Nv~gt~~ll~~a 148 (492)
+...|+++ +.+.. .++ .++|+.+||||+.- +. ++....+++|+.||.|++++.
T Consensus 59 f~padvts------ekdv~-aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~ 131 (260)
T KOG1199|consen 59 FTPADVTS------EKDVR-AALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLG 131 (260)
T ss_pred EeccccCc------HHHHH-HHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeeh
Confidence 99999995 33322 322 36999999999741 11 455677889999999999875
Q ss_pred Hhcc-------cceeEEEeeeceeec
Q 037479 149 KKCA-------KLIVLVHVSTAFVWG 167 (492)
Q Consensus 149 ~~~~-------~~~~~V~vST~~v~~ 167 (492)
.... +-+|=|.+.|+.|..
T Consensus 132 aglmg~nepdq~gqrgviintasvaa 157 (260)
T KOG1199|consen 132 AGLMGENEPDQNGQRGVIINTASVAA 157 (260)
T ss_pred hhhhcCCCCCCCCcceEEEeeceeee
Confidence 4321 224555566655554
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.4e-05 Score=73.18 Aligned_cols=95 Identities=18% Similarity=0.192 Sum_probs=54.3
Q ss_pred CCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCCCCCC
Q 037479 19 GATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITRED 98 (492)
Q Consensus 19 GatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~~~ 98 (492)
.+|||+|.+|++.|++.|++| .++.|+...... ...++.++..+-.+.
T Consensus 23 ~SSG~iG~aLA~~L~~~G~~V---~li~r~~~~~~~----------------------------~~~~v~~i~v~s~~~- 70 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGHEV---TLVTTKTAVKPE----------------------------PHPNLSIIEIENVDD- 70 (229)
T ss_pred ccchHHHHHHHHHHHhCCCEE---EEEECcccccCC----------------------------CCCCeEEEEEecHHH-
Confidence 468999999999999999754 777765321100 013455555432210
Q ss_pred CCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHh
Q 037479 99 LGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 99 lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
..+.....++++|+|||+||...+.. ....-..+...+.++.+++++
T Consensus 71 ----m~~~l~~~~~~~DivIh~AAvsd~~~-~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 71 ----LLETLEPLVKDHDVLIHSMAVSDYTP-VYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred ----HHHHHHHHhcCCCEEEeCCccCCcee-hhhhhhhhhhhhhhhhhhhcc
Confidence 01223345678999999999876532 111122334445555555553
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0001 Score=72.26 Aligned_cols=117 Identities=15% Similarity=0.094 Sum_probs=76.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+|+||||.+|++++..|.........+.++.|++. .... .+ ++. + .+....+.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~-al--Dl~-----------------~--~~~~~~i~~ 57 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGV-AV--DLS-----------------H--IPTAVKIKG 57 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccce-eh--hhh-----------------c--CCCCceEEE
Confidence 68999999999999999988653333345566666532 1110 00 000 0 011112223
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
.. ..+ ....++++|+||.+||..+- .....+.+..|....+++++.+++. +.+++|.+.|
T Consensus 58 -~~-------~~d-~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvs 118 (312)
T PRK05086 58 -FS-------GED-PTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIIT 118 (312)
T ss_pred -eC-------CCC-HHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence 11 112 22555889999999998543 3445678999999999999999998 7888888887
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=1.7e-05 Score=77.81 Aligned_cols=40 Identities=28% Similarity=0.295 Sum_probs=33.2
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.+++++|+||||||++|+.++++|++. ..+.+++++.|+.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~-~gv~~lilv~R~~ 191 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAK-TGVAELLLVARQQ 191 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhh-CCCCEEEEEcCCH
Confidence 478899999999999999999999864 2356788888763
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00017 Score=70.91 Aligned_cols=176 Identities=17% Similarity=0.056 Sum_probs=105.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCC-----eEEEEEecCCCc-CHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVK-----KLYLLLRAADAK-SATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~-----~i~~lvR~~~~~-~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
.++|.|+||+|++|..++..|+..+. +. .+.++.+.+... ...+.+ ++..... . ...
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~--Dl~~~~~-------------~-~~~ 64 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQALKALEGVAM--ELEDCAF-------------P-LLA 64 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCCcccccceeeh--hhhhccc-------------c-ccC
Confidence 46999999999999999999987553 33 677777743321 000000 1111000 0 001
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
++.+..+ + ...++++|+||-+||..+- .++-.+.+..|+.-.+.+....++......++.+-|
T Consensus 65 ~~~i~~~----------~----~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs-- 128 (322)
T cd01338 65 EIVITDD----------P----NVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVG-- 128 (322)
T ss_pred ceEEecC----------c----HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec--
Confidence 2222111 1 2555899999999997543 345567799999999999999888631244433333
Q ss_pred eecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 165 VWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 165 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
| |+|.-+. .+. +..| -.++.+.|+.|+...
T Consensus 129 -N----------------------PvD~~t~--~~~--------------------k~sg-----~~p~~~ViG~t~LDs 158 (322)
T cd01338 129 -N----------------------PCNTNAL--IAM--------------------KNAP-----DIPPDNFTAMTRLDH 158 (322)
T ss_pred -C----------------------cHHHHHH--HHH--------------------HHcC-----CCChHheEEehHHHH
Confidence 1 2221110 000 0000 013456888899999
Q ss_pred HHHHHHh--cCCCcEEEEeCCceecCCC
Q 037479 245 EMFIEHL--KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 245 E~~v~~~--~~~~~~~ivRPs~v~g~~~ 270 (492)
+++.... ..+++...+|..+|+|+..
T Consensus 159 ~Rl~~~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 159 NRAKSQLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred HHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence 9887765 4578999999989998875
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.76 E-value=6.4e-05 Score=74.75 Aligned_cols=91 Identities=23% Similarity=0.271 Sum_probs=69.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|+|.|| |++|+.++++|++++. .+|++..|++.... ++. .....+++.++
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~~~---~i~---------------------~~~~~~v~~~~ 53 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEKCA---RIA---------------------ELIGGKVEALQ 53 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHHHH---HHH---------------------hhccccceeEE
Confidence 378999998 9999999999999874 68899999865432 221 11125899999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
.|+. +.+.+.+++++.|+||||+.... +..++++|.+.
T Consensus 54 vD~~-------d~~al~~li~~~d~VIn~~p~~~---------------~~~i~ka~i~~ 91 (389)
T COG1748 54 VDAA-------DVDALVALIKDFDLVINAAPPFV---------------DLTILKACIKT 91 (389)
T ss_pred eccc-------ChHHHHHHHhcCCEEEEeCCchh---------------hHHHHHHHHHh
Confidence 9999 55556688899999999997421 12578888887
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0007 Score=67.22 Aligned_cols=93 Identities=12% Similarity=0.158 Sum_probs=53.2
Q ss_pred CCCEEEEeCCcchhhHH--HHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH-HHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 11 ENKTILVTGATGFLAKI--FVEKILRVQPNVKKLYLLLRAADAKSATVRFH-NEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 11 ~~~~vlITGatGflG~~--l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~-~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.+|++|||||++-+|.+ +++.| +.|.+ +.++.+...... .+.- .-+-....+....++. ...+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~---Vi~v~~~~~~~~--~~~~tagwy~~~a~~~~a~~~--------G~~a 105 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGAD---TLGVFFEKPGTE--KKTGTAGWYNSAAFDKFAKAA--------GLYA 105 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCe---EEEEecCcchhh--hcccccccchHHHHHHHHHhc--------CCce
Confidence 35899999999999999 88999 88864 456664321110 0000 0000001111111111 1346
Q ss_pred EEEecCCCCCCCCCCchhhHHHh-------ccCccEEEEccccc
Q 037479 88 TLVPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATT 124 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~ 124 (492)
..+.+|++++ +..+.+ +.++|+++|++|..
T Consensus 106 ~~i~~DVss~-------E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 106 KSINGDAFSD-------EIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred EEEEcCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 7789999953 323222 24699999999976
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00058 Score=67.26 Aligned_cols=103 Identities=19% Similarity=0.105 Sum_probs=68.5
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCC-----eEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVK-----KLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~-----~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+|.||||+|.+|+.++..|+..+. +. .+.++.+.+.. ++.+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~-~~~~~~~~l~L~Di~~~~---------------------------------~~~~ 47 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGEL-FGDDQPVILHLLDIPPAM---------------------------------KALE 47 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCc-cCCCCceEEEEEecCCcc---------------------------------Cccc
Confidence 799999999999999998886542 33 37777775421 1112
Q ss_pred EEecCCCCCCCCCCc-----hhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 89 LVPGDITREDLGVKD-----SNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~-----~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
....|+.+....+.. .+ ..+.++++|+|||+||..+- .++..+.+..|+.-.+.+....++.
T Consensus 48 g~~~Dl~d~~~~~~~~~~i~~~-~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 48 GVVMELQDCAFPLLKGVVITTD-PEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred eeeeehhhhcccccCCcEEecC-hHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 223333332100000 11 23667899999999997643 3456778999999999999988886
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0003 Score=66.72 Aligned_cols=92 Identities=11% Similarity=0.215 Sum_probs=61.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||+||||. |+.|++.|.+.|+ +|++.+|+..+...... .....++.|
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~---~v~~s~~t~~~~~~~~~--------------------------~g~~~v~~g 50 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGI---EILVTVTTSEGKHLYPI--------------------------HQALTVHTG 50 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCC---eEEEEEccCCccccccc--------------------------cCCceEEEC
Confidence 68999999999 9999999999886 45888888765332111 012233444
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccce
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLI 155 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~ 155 (492)
-+. ..+ +...++ ++|+|||++.+ +. ..-+.++.++|++. ++.
T Consensus 51 ~l~-------~~~-l~~~l~~~~i~~VIDAtHP------fA------~~is~~a~~a~~~~-~ip 94 (256)
T TIGR00715 51 ALD-------PQE-LREFLKRHSIDILVDATHP------FA------AQITTNATAVCKEL-GIP 94 (256)
T ss_pred CCC-------HHH-HHHHHHhcCCCEEEEcCCH------HH------HHHHHHHHHHHHHh-CCc
Confidence 333 333 434444 69999998753 11 24567788999998 655
|
This enzyme was found to be a monomer by gel filtration. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00073 Score=66.58 Aligned_cols=112 Identities=21% Similarity=0.092 Sum_probs=72.2
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCC-----eEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVK-----KLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~-----~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+|.|+||+|.+|+.++..|...+. +. .++++.+.+... +.+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~~~~---------------------------------~a~ 46 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPPAMK---------------------------------VLE 46 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCCccc---------------------------------ccc
Confidence 589999999999999999986542 21 467777754321 122
Q ss_pred EEecCCCCCCCCC----C-chhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 89 LVPGDITREDLGV----K-DSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 89 ~v~gDl~~~~lgl----~-~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
....|+.+....+ . ..+. ...++++|+|||+||..+- .++..+.+..|+.-.+.+.+..++..+...++.+
T Consensus 47 g~~~Dl~d~~~~~~~~~~~~~~~-~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiiv 123 (324)
T TIGR01758 47 GVVMELMDCAFPLLDGVVPTHDP-AVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLV 123 (324)
T ss_pred eeEeehhcccchhcCceeccCCh-HHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 2333333322100 0 0121 2666899999999997654 3446778999999999999999886223344443
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0011 Score=60.90 Aligned_cols=136 Identities=18% Similarity=0.172 Sum_probs=84.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCC--CCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPN--VKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~--V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.|.++|||++..+|-.++.+|++...+ +-++.+..|+-+... ++..+|+.-+|.. .-.+.+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae------------~vc~~lk~f~p~~-----~i~~~y 65 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAE------------AVCAALKAFHPKS-----TIEVTY 65 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHH------------HHHHHHHHhCCCc-----eeEEEE
Confidence 478999999999999999999987544 224555566533211 1122333333321 256888
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc----------------------------------chhHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF----------------------------------DERYDVALD 135 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~----------------------------------~~~~~~~~~ 135 (492)
+..|+++-...+.....+..-++..|.|+-.||...+ .+.+...++
T Consensus 66 vlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFe 145 (341)
T KOG1478|consen 66 VLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFE 145 (341)
T ss_pred EEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhh
Confidence 9999985332221111222334578999999986421 134567889
Q ss_pred HhHHHHHHHHHHHHhc---ccceeEEEeeece
Q 037479 136 LNTFGAKHVLNFSKKC---AKLIVLVHVSTAF 164 (492)
Q Consensus 136 ~Nv~gt~~ll~~a~~~---~~~~~~V~vST~~ 164 (492)
+||.|.--+++..... ..-..+|.+||..
T Consensus 146 tnVFGhfyli~~l~pll~~~~~~~lvwtSS~~ 177 (341)
T KOG1478|consen 146 TNVFGHFYLIRELEPLLCHSDNPQLVWTSSRM 177 (341)
T ss_pred hcccchhhhHhhhhhHhhcCCCCeEEEEeecc
Confidence 9999987776644332 1123799999853
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00025 Score=71.76 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=32.1
Q ss_pred cCCCEEEEeCC----------------cchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGA----------------TGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGa----------------tGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
++||+|+|||| ||.+|.++++.|.+.|.+ |+++.|+.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~---V~~v~~~~ 238 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGAD---VTLVSGPV 238 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCE---EEEeCCCc
Confidence 68999999999 999999999999999965 47776654
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0044 Score=53.27 Aligned_cols=115 Identities=16% Similarity=0.109 Sum_probs=74.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|.|+||+|.+|++++..|+..+ -+..++++.+.+... +....++.... .+...++....+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~-l~~ei~L~D~~~~~~---~g~a~Dl~~~~--------------~~~~~~~~i~~~ 62 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQG-LADEIVLIDINEDKA---EGEALDLSHAS--------------APLPSPVRITSG 62 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTT-TSSEEEEEESSHHHH---HHHHHHHHHHH--------------HGSTEEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CCCceEEeccCcccc---eeeehhhhhhh--------------hhcccccccccc
Confidence 589999999999999999998874 467788888864311 11111111111 111122333332
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
| .+.++++|+|+-+||..+- .+.-.+.++.|..-.+.+.+..++. +.+.++.+
T Consensus 63 ~--------------~~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~viv 116 (141)
T PF00056_consen 63 D--------------YEALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAIVIV 116 (141)
T ss_dssp S--------------GGGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSEEEE
T ss_pred c--------------ccccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccEEEE
Confidence 2 1444899999999997543 3456777899999999999998887 44444443
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0005 Score=62.74 Aligned_cols=82 Identities=21% Similarity=0.212 Sum_probs=53.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++|+||||.+|+.+++.|++.|. +|+++.|+... .+.+. +.+.++ .+...
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~---~V~l~~R~~~~---~~~l~---------~~l~~~----------~~~~~ 80 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA---RVVLVGRDLER---AQKAA---------DSLRAR----------FGEGV 80 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH---------HHHHhh----------cCCcE
Confidence 4679999999999999999999998874 56788775321 11111 111111 12334
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAAT 123 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~ 123 (492)
..+|.. +.+.....++++|+||++.+.
T Consensus 81 ~~~~~~-------~~~~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 81 GAVETS-------DDAARAAAIKGADVVFAAGAA 107 (194)
T ss_pred EEeeCC-------CHHHHHHHHhcCCEEEECCCC
Confidence 455665 434344677899999997764
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00048 Score=61.94 Aligned_cols=80 Identities=20% Similarity=0.317 Sum_probs=46.9
Q ss_pred cCCCEEEEeCC----------------cchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHH
Q 037479 10 LENKTILVTGA----------------TGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKE 73 (492)
Q Consensus 10 ~~~~~vlITGa----------------tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~ 73 (492)
++||+||||+| ||-+|..|++.+.+.|.+| .++..+..-..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V---~li~g~~~~~~-------------------- 57 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEV---TLIHGPSSLPP-------------------- 57 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EE---EEEE-TTS-----------------------
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEE---EEEecCccccc--------------------
Confidence 47899999976 6899999999999999755 56555532100
Q ss_pred hcCCchhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc
Q 037479 74 KNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD 127 (492)
Q Consensus 74 ~~~~~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~ 127 (492)
...+..+...-.+. -.+.....+++.|++||+||...|.
T Consensus 58 ----------p~~~~~i~v~sa~e-----m~~~~~~~~~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 58 ----------PPGVKVIRVESAEE-----MLEAVKELLPSADIIIMAAAVSDFR 96 (185)
T ss_dssp -----------TTEEEEE-SSHHH-----HHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred ----------cccceEEEecchhh-----hhhhhccccCcceeEEEecchhhee
Confidence 14566666543311 0122234456789999999998875
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.027 Score=51.38 Aligned_cols=112 Identities=18% Similarity=0.269 Sum_probs=69.2
Q ss_pred hcCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 9 FLENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 9 ~~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
+++||++||+|-. --|+..+++.|.++|.+. ...-..+ ...+|++ .|.++. ..
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL---~fTy~~e---~l~krv~----------~la~~~---------~s 57 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAEL---AFTYQGE---RLEKRVE----------ELAEEL---------GS 57 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEE---EEEeccH---HHHHHHH----------HHHhhc---------cC
Confidence 6789999999943 468999999999999643 3333322 2233333 122221 22
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-----------hhHHHHHHHhHHHHHHHHHHH
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-----------ERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-----------~~~~~~~~~Nv~gt~~ll~~a 148 (492)
-.++++|+++ ++.++.++ .+.|.++|+.|...-+ +.+..+.++-..+...+.+.|
T Consensus 58 ~~v~~cDV~~-------d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a 130 (259)
T COG0623 58 DLVLPCDVTN-------DESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAA 130 (259)
T ss_pred CeEEecCCCC-------HHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHH
Confidence 3568999995 33343443 4689999999975311 334455566666666666666
Q ss_pred Hhcc
Q 037479 149 KKCA 152 (492)
Q Consensus 149 ~~~~ 152 (492)
+.+.
T Consensus 131 ~~lM 134 (259)
T COG0623 131 RPLM 134 (259)
T ss_pred HHhc
Confidence 6643
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0013 Score=63.34 Aligned_cols=89 Identities=24% Similarity=0.416 Sum_probs=59.2
Q ss_pred EEEEeCCcchhhHHHHHHHHhhC--CCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 14 TILVTGATGFLAKIFVEKILRVQ--PNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g--~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.+.|-|||||.|+.+++.+++.+ .. -.+-+..|+.+ +|++ . ...+-+..+.+ +...+ ++.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~-~slavAGRn~~------KL~~-v-----L~~~~~k~~~~----ls~~~-i~i 68 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEG-LSLAVAGRNEK------KLQE-V-----LEKVGEKTGTD----LSSSV-ILI 68 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccC-ceEEEecCCHH------HHHH-H-----HHHHhhccCCC----cccce-EEE
Confidence 68999999999999999999832 11 13444555532 2321 1 11111222222 23444 888
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD 127 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~ 127 (492)
+|.. +++.+.++.+.+.+|+||+|+-++.
T Consensus 69 ~D~~-------n~~Sl~emak~~~vivN~vGPyR~h 97 (423)
T KOG2733|consen 69 ADSA-------NEASLDEMAKQARVIVNCVGPYRFH 97 (423)
T ss_pred ecCC-------CHHHHHHHHhhhEEEEeccccceec
Confidence 9999 6777889999999999999998775
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0028 Score=62.97 Aligned_cols=39 Identities=28% Similarity=0.318 Sum_probs=33.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
+++|+|.||||++|..|++.|.++++.+.++..++|...
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS 39 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence 468999999999999999999998877778888887644
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.001 Score=55.63 Aligned_cols=35 Identities=17% Similarity=0.460 Sum_probs=29.8
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+|.|.||||++|+.|++.|++ -+.+.-+.+..|+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeeecc
Confidence 689999999999999999988 57887677777766
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00063 Score=69.20 Aligned_cols=90 Identities=24% Similarity=0.371 Sum_probs=60.4
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|+|.|| |++|+.+++.|++.+. +.+|.+..|+... .+++.+++ ...++..+..|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~-~~~v~va~r~~~~---~~~~~~~~--------------------~~~~~~~~~~d~ 55 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGP-FEEVTVADRNPEK---AERLAEKL--------------------LGDRVEAVQVDV 55 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTC-E-EEEEEESSHHH---HHHHHT----------------------TTTTEEEEE--T
T ss_pred CEEEcC-cHHHHHHHHHHhcCCC-CCcEEEEECCHHH---HHHHHhhc--------------------cccceeEEEEec
Confidence 799999 9999999999999763 3378888887432 11111000 137899999999
Q ss_pred CCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 95 TREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
. +.+.+.+++++.|+||||++.. + ...++++|.+.
T Consensus 56 ~-------~~~~l~~~~~~~dvVin~~gp~-~--------------~~~v~~~~i~~ 90 (386)
T PF03435_consen 56 N-------DPESLAELLRGCDVVINCAGPF-F--------------GEPVARACIEA 90 (386)
T ss_dssp T-------THHHHHHHHTTSSEEEE-SSGG-G--------------HHHHHHHHHHH
T ss_pred C-------CHHHHHHHHhcCCEEEECCccc-h--------------hHHHHHHHHHh
Confidence 9 5555778899999999999864 1 12377888876
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0036 Score=60.88 Aligned_cols=86 Identities=15% Similarity=0.147 Sum_probs=54.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++|||| |.+|++++..|.+.|. ++|+++.|+.......+.+.++ +.+. ..++..
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a~~l~~~---------l~~~---------~~~~~~ 182 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTAEK---------IKQE---------VPECIV 182 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHHHHHHHH---------Hhhc---------CCCcee
Confidence 35789999998 8999999999999885 5689999975311112222111 1111 123344
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAAT 123 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~ 123 (492)
...|++ +.+..+..++++|+|||+-..
T Consensus 183 ~~~d~~-------~~~~~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 183 NVYDLN-------DTEKLKAEIASSDILVNATLV 209 (289)
T ss_pred EEechh-------hhhHHHhhhccCCEEEEeCCC
Confidence 556766 333344566788999997654
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.008 Score=59.01 Aligned_cols=120 Identities=15% Similarity=0.074 Sum_probs=70.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+||||.+|.+++..|+..|. ...|.++.|.++... .+.. ..++.+.+... ..... +.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-~~~v~lvd~~~~~~~-l~~~-----~~dl~d~~~~~---------~~~~~-i~~ 63 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-VKEINLISRPKSLEK-LKGL-----RLDIYDALAAA---------GIDAE-IKI 63 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEECcccccc-cccc-----cchhhhchhcc---------CCCcE-EEE
Confidence 6899999999999999999998764 346788888432111 0000 00111100000 00111 111
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vS 161 (492)
+ .+ . ..++++|+||-+|+...- ..+..+.++.|+.-.+.+++...+...-..+|.+|
T Consensus 64 --~--------~d-~-~~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~ 121 (309)
T cd05294 64 --S--------SD-L-SDVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVT 121 (309)
T ss_pred --C--------CC-H-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 1 11 2 336899999999997543 23446678899999999998877752212344444
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.02 Score=52.28 Aligned_cols=131 Identities=18% Similarity=0.219 Sum_probs=77.1
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH-----HHhhcC----hhhHHHHHhcC
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH-----NEIIGK----DLFRVLKEKNG 76 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~-----~~~~~~----~~f~~l~~~~~ 76 (492)
.++-+++.+|+|.|++| +|..+++.|.+.| |+++.++....-..+-..|.. ++-.+. ..-+.|++-.|
T Consensus 13 ~q~~L~~s~VlviG~gg-lGsevak~L~~~G--Vg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp 89 (198)
T cd01485 13 AQNKLRSAKVLIIGAGA-LGAEIAKNLVLAG--IDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP 89 (198)
T ss_pred HHHHHhhCcEEEECCCH-HHHHHHHHHHHcC--CCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC
Confidence 35567789999999888 9999999999987 478888876543322222210 000010 11233444433
Q ss_pred CchhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhccccee
Q 037479 77 THLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIV 156 (492)
Q Consensus 77 ~~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~ 156 (492)
. -+++.+..++.+ ..+.....+++.|+||.|-. +.... ..+-++|++. + ..
T Consensus 90 ~-------v~i~~~~~~~~~------~~~~~~~~~~~~dvVi~~~d------~~~~~--------~~ln~~c~~~-~-ip 140 (198)
T cd01485 90 N-------VKLSIVEEDSLS------NDSNIEEYLQKFTLVIATEE------NYERT--------AKVNDVCRKH-H-IP 140 (198)
T ss_pred C-------CEEEEEeccccc------chhhHHHHHhCCCEEEECCC------CHHHH--------HHHHHHHHHc-C-CC
Confidence 1 356666666542 11223366789999997642 12222 2245778876 4 36
Q ss_pred EEEeeeceeecc
Q 037479 157 LVHVSTAFVWGE 168 (492)
Q Consensus 157 ~V~vST~~v~~~ 168 (492)
||+.++.+.+|.
T Consensus 141 ~i~~~~~G~~G~ 152 (198)
T cd01485 141 FISCATYGLIGY 152 (198)
T ss_pred EEEEEeecCEEE
Confidence 899988777664
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.017 Score=57.42 Aligned_cols=128 Identities=20% Similarity=0.222 Sum_probs=77.5
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH----HHhh-c----ChhhHHHHHhcCC
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH----NEII-G----KDLFRVLKEKNGT 77 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~----~~~~-~----~~~f~~l~~~~~~ 77 (492)
++-+++++|+|.|+ |.+|+.++..|.+.|. ++|.++.+..-..+-..|-. +.+- . ....+++++-.|
T Consensus 19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGv--g~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp- 94 (339)
T PRK07688 19 QQKLREKHVLIIGA-GALGTANAEMLVRAGV--GKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS- 94 (339)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcCC--CeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC-
Confidence 55678899999996 8999999999999874 78888877543222222210 0010 0 001123332222
Q ss_pred chhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeE
Q 037479 78 HLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVL 157 (492)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~ 157 (492)
.-+++.+..+++ ..+ ...++++.|+||.|... . ..-..+.++|.+. + ..+
T Consensus 95 ------~v~v~~~~~~~~-------~~~-~~~~~~~~DlVid~~Dn------~--------~~r~~ln~~~~~~-~-iP~ 144 (339)
T PRK07688 95 ------DVRVEAIVQDVT-------AEE-LEELVTGVDLIIDATDN------F--------ETRFIVNDAAQKY-G-IPW 144 (339)
T ss_pred ------CcEEEEEeccCC-------HHH-HHHHHcCCCEEEEcCCC------H--------HHHHHHHHHHHHh-C-CCE
Confidence 134667777776 333 34677899999988531 1 1122355677776 4 468
Q ss_pred EEeeeceeecc
Q 037479 158 VHVSTAFVWGE 168 (492)
Q Consensus 158 V~vST~~v~~~ 168 (492)
|+.|+...+|.
T Consensus 145 i~~~~~g~~G~ 155 (339)
T PRK07688 145 IYGACVGSYGL 155 (339)
T ss_pred EEEeeeeeeeE
Confidence 99888777764
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.015 Score=57.82 Aligned_cols=129 Identities=22% Similarity=0.238 Sum_probs=77.1
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---H-Hhh-cC----hhhHHHHHhcC
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---N-EII-GK----DLFRVLKEKNG 76 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~-~~~-~~----~~f~~l~~~~~ 76 (492)
-++-+++++|+|.|+ |-+|+.+++.|.+.|. +++.++.+..-..+-..|-. . .+- .. ..-+++++-.|
T Consensus 18 ~Q~~L~~~~VlIiG~-GglGs~va~~La~aGv--g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp 94 (338)
T PRK12475 18 GQRKIREKHVLIVGA-GALGAANAEALVRAGI--GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS 94 (338)
T ss_pred HHHhhcCCcEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC
Confidence 456678899999996 6699999999999874 77888877653322222210 0 000 00 01123333332
Q ss_pred CchhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhccccee
Q 037479 77 THLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIV 156 (492)
Q Consensus 77 ~~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~ 156 (492)
.-+++.+..|++ .+. .+.+++++|+||.+... ...- ..+-++|.+. + ..
T Consensus 95 -------~v~i~~~~~~~~-------~~~-~~~~~~~~DlVid~~D~------~~~r--------~~in~~~~~~-~-ip 143 (338)
T PRK12475 95 -------EVEIVPVVTDVT-------VEE-LEELVKEVDLIIDATDN------FDTR--------LLINDLSQKY-N-IP 143 (338)
T ss_pred -------CcEEEEEeccCC-------HHH-HHHHhcCCCEEEEcCCC------HHHH--------HHHHHHHHHc-C-CC
Confidence 145677777776 333 34678899999988631 1111 1244567765 4 45
Q ss_pred EEEeeeceeecc
Q 037479 157 LVHVSTAFVWGE 168 (492)
Q Consensus 157 ~V~vST~~v~~~ 168 (492)
+|+.+....+|.
T Consensus 144 ~i~~~~~g~~G~ 155 (338)
T PRK12475 144 WIYGGCVGSYGV 155 (338)
T ss_pred EEEEEecccEEE
Confidence 888887666654
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.017 Score=56.90 Aligned_cols=119 Identities=18% Similarity=0.071 Sum_probs=73.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCC-----eEEEEEecCCC-cCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVK-----KLYLLLRAADA-KSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~-----~i~~lvR~~~~-~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
..+|.|+||+|++|+.++..|+..+. +. .++++.+.+.. ....+.+ ++..... . ...
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~a~--Dl~~~~~-------------~-~~~ 65 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPPAMKALEGVAM--ELEDCAF-------------P-LLA 65 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCCcccccchHHH--HHhhccc-------------c-ccC
Confidence 35899999999999999999987653 34 67777775422 1111111 1111100 0 001
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccC-cchhHHHHHHHhHHHHHHHHHHHHhcccc-eeEEEeee
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTN-FDERYDVALDLNTFGAKHVLNFSKKCAKL-IVLVHVST 162 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~-~~~V~vST 162 (492)
++.+..+ + ...++++|+||-+||..+ ..++..+.+..|+.-.+.+.+.+++. .. +.++.+-|
T Consensus 66 ~~~i~~~------------~--~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~-~~~~~iiivvs 129 (323)
T TIGR01759 66 GVVATTD------------P--EEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV-AKKDVKVLVVG 129 (323)
T ss_pred CcEEecC------------h--HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEEEeC
Confidence 1211111 1 255589999999999754 33556778999999999999998887 33 44444443
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0037 Score=63.07 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=30.7
Q ss_pred cCCCEEEEeCC----------------cchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGA----------------TGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGa----------------tGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
++|++|+|||| ||.+|..+++.|...|.+| +++.++.
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V---~~~~g~~ 235 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADV---TLITGPV 235 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEE---EEeCCCC
Confidence 67899999998 5789999999999999654 6666554
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0014 Score=61.17 Aligned_cols=29 Identities=34% Similarity=0.439 Sum_probs=22.3
Q ss_pred EEe-CCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 16 LVT-GATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 16 lIT-GatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
+|| .+||.+|.++++.|++.|++| +++.|
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~V---vlv~~ 47 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEV---TLVTT 47 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEE---EEEcC
Confidence 344 358999999999999999755 55544
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.009 Score=60.18 Aligned_cols=38 Identities=21% Similarity=0.362 Sum_probs=30.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-..++|.|.||||++|..|++.|++. +.+ +|..+.+..
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~h-P~~-el~~l~s~~ 73 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANH-PDF-EITVMTADR 73 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhC-CCC-eEEEEEChh
Confidence 35579999999999999999998876 444 677777743
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.056 Score=53.18 Aligned_cols=114 Identities=10% Similarity=0.083 Sum_probs=73.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++|.|+|+ |.+|..++..|+..+. +..++++.+.+........ ++..... +. .++...
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~-~~el~L~D~~~~~~~g~~~---Dl~~~~~--------------~~-~~~~i~ 64 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGI-ADELVIIDINKEKAEGDAM---DLSHAVP--------------FT-SPTKIY 64 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCCchhHHHHH---HHHhhcc--------------cc-CCeEEE
Confidence 4689999998 9999999999987653 4578888885443222111 1211100 01 223332
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.+| . +.++++|+||-+||..+- ..+..+.+..|..-.+.+++.+++. +.+.+|.
T Consensus 65 ~~~-------------~-~~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~-~~~~~vi 119 (315)
T PRK00066 65 AGD-------------Y-SDCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS-GFDGIFL 119 (315)
T ss_pred eCC-------------H-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE
Confidence 221 2 335899999999997543 3455678999999999998888876 4444433
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.013 Score=64.49 Aligned_cols=173 Identities=15% Similarity=0.187 Sum_probs=112.2
Q ss_pred ccHHhhcC--CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhh
Q 037479 4 GSVLEFLE--NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNA 81 (492)
Q Consensus 4 ~~~~~~~~--~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~ 81 (492)
+.|+..|- .|+.+|+||-|..|-.|+.-|..+|. .++.+.+|+.-...-+.++- .+++++
T Consensus 1758 ~AI~rt~~hpeksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~v---------rrWr~~------- 1819 (2376)
T KOG1202|consen 1758 SAIPRTYCHPEKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALMV---------RRWRRR------- 1819 (2376)
T ss_pred hhcchhhcCccceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHHH---------HHHHhc-------
Confidence 34555443 48999999999999999999999986 56777778754433332221 111111
Q ss_pred hccCceEEEecCCCCCCCCCCchhhHHHhcc------CccEEEEcccccCc----c---hhHHHHHHHhHHHHHHHHHHH
Q 037479 82 LISEKITLVPGDITREDLGVKDSNLREEMWN------KLDVVINLAATTNF----D---ERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~~~----~---~~~~~~~~~Nv~gt~~ll~~a 148 (492)
.-+|.+-.-|++. .+... .+++ -+--|||+|+..+. + ++.++.-+.-+.||.++=+..
T Consensus 1820 --GVqV~vsT~nitt------~~ga~-~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~s 1890 (2376)
T KOG1202|consen 1820 --GVQVQVSTSNITT------AEGAR-GLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVS 1890 (2376)
T ss_pred --CeEEEEecccchh------hhhHH-HHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhh
Confidence 1233333456663 22222 4443 47789999998753 1 345556666788999988877
Q ss_pred Hh-cccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 149 KK-CAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 149 ~~-~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
++ ++.++-||..||..+ .+..
T Consensus 1891 Re~C~~LdyFv~FSSvsc--GRGN-------------------------------------------------------- 1912 (2376)
T KOG1202|consen 1891 REICPELDYFVVFSSVSC--GRGN-------------------------------------------------------- 1912 (2376)
T ss_pred hhhCcccceEEEEEeecc--cCCC--------------------------------------------------------
Confidence 76 456789999998543 2210
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-cCCCcEEEEeCCce
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-KENMSVAIVRPTII 265 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-~~~~~~~ivRPs~v 265 (492)
--.+.|+.+....|+++.+. ..|+|-+.+-=+.|
T Consensus 1913 ----~GQtNYG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1913 ----AGQTNYGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred ----CcccccchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence 12356999999999999876 56788777765544
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.014 Score=58.11 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=31.2
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
+|+|.||||++|..|++.|.++++.+..+..+.|..+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~ 37 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRS 37 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEecccc
Confidence 5899999999999999999988888777777766543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.045 Score=54.03 Aligned_cols=119 Identities=17% Similarity=0.069 Sum_probs=72.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCC-----eEEEEEecCCC-cCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVK-----KLYLLLRAADA-KSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~-----~i~~lvR~~~~-~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
.++|.|+||+|.+|+.++..|+..+. +. .+.++.+.+.. ....+.+ ++..... .. ..
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~--Dl~~~~~-------------~~-~~ 66 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVM--ELDDCAF-------------PL-LA 66 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeeh--hhhhhhh-------------hh-cC
Confidence 46999999999999999999887543 33 67777764332 1111111 1111000 00 01
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccC-cchhHHHHHHHhHHHHHHHHHHHHhcccceeE-EEee
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTN-FDERYDVALDLNTFGAKHVLNFSKKCAKLIVL-VHVS 161 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~-V~vS 161 (492)
++.+..+ + .+.++++|+||-+||..+ ..++..+.+..|+.-.+.+.+..++..+.+.+ +.+|
T Consensus 67 ~~~i~~~------------~--y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 67 GVVITDD------------P--NVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred CcEEecC------------h--HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 2222111 1 145589999999999654 34566778999999999999998884333444 4444
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.078 Score=50.19 Aligned_cols=127 Identities=19% Similarity=0.121 Sum_probs=75.4
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcChh----hHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKDL----FRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~~----f~~l~~~~~~~~ 79 (492)
++-+++++|+|.|+ |-+|+.++..|.+.| |+++.++....-..+-..|.. .+-...+. -.+|++-.|
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp--- 100 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAG--VGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINP--- 100 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCC---
Confidence 45577899999997 899999999999987 578888876544444333310 00011111 223333333
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-+++.+...++ ..+ ...+++++|+||.|... .+ .-..+-++|.+. + ..+|+
T Consensus 101 ----~v~i~~~~~~i~-------~~~-~~~~~~~~DiVi~~~D~------~~--------~r~~ln~~~~~~-~-ip~v~ 152 (245)
T PRK05690 101 ----HIAIETINARLD-------DDE-LAALIAGHDLVLDCTDN------VA--------TRNQLNRACFAA-K-KPLVS 152 (245)
T ss_pred ----CCEEEEEeccCC-------HHH-HHHHHhcCCEEEecCCC------HH--------HHHHHHHHHHHh-C-CEEEE
Confidence 135566666555 333 34677899999998642 11 112355677775 4 45787
Q ss_pred eeeceeec
Q 037479 160 VSTAFVWG 167 (492)
Q Consensus 160 vST~~v~~ 167 (492)
.++...+|
T Consensus 153 ~~~~g~~G 160 (245)
T PRK05690 153 GAAIRMEG 160 (245)
T ss_pred eeeccCCc
Confidence 66544433
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.018 Score=59.93 Aligned_cols=77 Identities=21% Similarity=0.266 Sum_probs=51.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+|+|+++ +|..+++.|++.|++| .+..+.... ...+++ +.+. ..++.+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V---~~~d~~~~~-~~~~~~----------~~l~-----------~~~~~~ 56 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKV---ILTDEKEED-QLKEAL----------EELG-----------ELGIEL 56 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEE---EEEeCCchH-HHHHHH----------HHHH-----------hcCCEE
Confidence 4689999999888 9999999999999755 666554311 111111 1111 135667
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEccccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATT 124 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~ 124 (492)
+.+|.. + ...+++|+||++++..
T Consensus 57 ~~~~~~-------~-----~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 57 VLGEYP-------E-----EFLEGVDLVVVSPGVP 79 (450)
T ss_pred EeCCcc-------h-----hHhhcCCEEEECCCCC
Confidence 778766 2 2336789999999864
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.12 Score=50.50 Aligned_cols=113 Identities=16% Similarity=0.085 Sum_probs=70.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|.|+||+|.+|++++..|+..+. +..+.++.+. ........+. ... ...++....+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~-~~elvLiDi~-~a~g~alDL~----~~~----------------~~~~i~~~~~ 58 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPL-VSELALYDIV-NTPGVAADLS----HIN----------------TPAKVTGYLG 58 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CcEEEEEecC-ccceeehHhH----hCC----------------CcceEEEecC
Confidence 5899999999999999998877653 4567777665 2111111111 000 0011111101
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccC-cchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTN-FDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
+.+ ....++++|+||-+||..+ ..+.-.+.++.|..-.+.+.+..++. +.+.++.
T Consensus 59 ----------~~~-~y~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~vi 114 (310)
T cd01337 59 ----------PEE-LKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKALIL 114 (310)
T ss_pred ----------CCc-hHHhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE
Confidence 111 1256689999999999854 33556778999999999999988887 4454443
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.091 Score=48.17 Aligned_cols=129 Identities=17% Similarity=0.148 Sum_probs=76.0
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTH 78 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~ 78 (492)
-++-+++++|+|.| .|-+|+.+++.|.+.|. +++.++.+..-..+-..|.. .+-.... ..+++++-.|
T Consensus 15 ~q~kl~~~~VlviG-~GglGs~ia~~La~~Gv--~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-- 89 (202)
T TIGR02356 15 GQQRLLNSHVLIIG-AGGLGSPAALYLAGAGV--GTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS-- 89 (202)
T ss_pred HHHHhcCCCEEEEC-CCHHHHHHHHHHHHcCC--CeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC--
Confidence 45668889999999 77899999999999874 78888877643333233310 0000111 1223333222
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
.-+++.+...+. .++ ...++++.|+||.|... .. .-..+-++|++. + ..+|
T Consensus 90 -----~v~i~~~~~~i~-------~~~-~~~~~~~~D~Vi~~~d~------~~--------~r~~l~~~~~~~-~-ip~i 140 (202)
T TIGR02356 90 -----DIQVTALKERVT-------AEN-LELLINNVDLVLDCTDN------FA--------TRYLINDACVAL-G-TPLI 140 (202)
T ss_pred -----CCEEEEehhcCC-------HHH-HHHHHhCCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEE
Confidence 134455555554 333 34677899999988642 11 112255677775 4 4688
Q ss_pred Eeeeceeecc
Q 037479 159 HVSTAFVWGE 168 (492)
Q Consensus 159 ~vST~~v~~~ 168 (492)
+.++...+|.
T Consensus 141 ~~~~~g~~G~ 150 (202)
T TIGR02356 141 SAAVVGFGGQ 150 (202)
T ss_pred EEEeccCeEE
Confidence 8887655554
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.034 Score=55.11 Aligned_cols=36 Identities=31% Similarity=0.318 Sum_probs=29.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
++|.|+||||++|..|++.|.++++.+..+..+..+
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~ 40 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS 40 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc
Confidence 699999999999999999999877766666666443
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.028 Score=56.08 Aligned_cols=31 Identities=23% Similarity=0.493 Sum_probs=24.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLL 45 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l 45 (492)
++|.|.||||++|..+++.|.+. +.+ ++..+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~~-el~~l 31 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PEV-EITYL 31 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEE
Confidence 58999999999999999999864 555 44433
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.97 Score=39.05 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=27.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLY 43 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~ 43 (492)
...+|+|-||-|-+|+.+++.+...++-|..|-
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siD 34 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSID 34 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEe
Confidence 346899999999999999999999888664443
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.13 Score=48.49 Aligned_cols=128 Identities=19% Similarity=0.151 Sum_probs=75.5
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTH 78 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~ 78 (492)
-++-+++.+|+|.| .|-+|+.+++.|.+.| |+++.+..+..-..+-..|.. .+-...+ .-.+|++..|.
T Consensus 18 ~q~~L~~~~VlvvG-~GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~- 93 (240)
T TIGR02355 18 GQEALKASRVLIVG-LGGLGCAASQYLAAAG--VGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPH- 93 (240)
T ss_pred HHHHHhCCcEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCC-
Confidence 35667889999999 6779999999999987 588888777654433333310 0001111 12233333331
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
-+++.+...++ .++ ...++++.|+||.+... .. ....+-++|.+. + ..||
T Consensus 94 ------v~i~~~~~~i~-------~~~-~~~~~~~~DlVvd~~D~------~~--------~r~~ln~~~~~~-~-ip~v 143 (240)
T TIGR02355 94 ------IAINPINAKLD-------DAE-LAALIAEHDIVVDCTDN------VE--------VRNQLNRQCFAA-K-VPLV 143 (240)
T ss_pred ------cEEEEEeccCC-------HHH-HHHHhhcCCEEEEcCCC------HH--------HHHHHHHHHHHc-C-CCEE
Confidence 34555555444 333 34677899999998742 11 122345677775 4 4688
Q ss_pred Eeeeceeec
Q 037479 159 HVSTAFVWG 167 (492)
Q Consensus 159 ~vST~~v~~ 167 (492)
+.++...+|
T Consensus 144 ~~~~~g~~G 152 (240)
T TIGR02355 144 SGAAIRMEG 152 (240)
T ss_pred EEEecccEe
Confidence 876654444
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.011 Score=50.37 Aligned_cols=37 Identities=27% Similarity=0.419 Sum_probs=32.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+++++++|.|| |-.|+.++..|.+.|. ++|++..|+.
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~ 46 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTP 46 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSH
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCH
Confidence 67899999996 7799999999999875 6789999974
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.11 Score=44.14 Aligned_cols=122 Identities=21% Similarity=0.302 Sum_probs=71.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHH--H-HHHhhcCh----hhHHHHHhcCCchhhhcc
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVR--F-HNEIIGKD----LFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r--~-~~~~~~~~----~f~~l~~~~~~~~~~~~~ 84 (492)
+++|+|.| .|-+|+.++..|.+.|. .++.+.....-..+-..| + ..+-.... .-+.+++..| .
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv--~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np-------~ 71 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGV--GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP-------D 71 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTT--SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST-------T
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCC--CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC-------c
Confidence 57999999 77799999999999875 777777654322211111 0 00000111 1223333333 2
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
-++..+..+++ .+. ...+++++|+||.|.... .....+.+.|++. + ..+|+.++..
T Consensus 72 ~~v~~~~~~~~-------~~~-~~~~~~~~d~vi~~~d~~--------------~~~~~l~~~~~~~-~-~p~i~~~~~g 127 (135)
T PF00899_consen 72 VEVEAIPEKID-------EEN-IEELLKDYDIVIDCVDSL--------------AARLLLNEICREY-G-IPFIDAGVNG 127 (135)
T ss_dssp SEEEEEESHCS-------HHH-HHHHHHTSSEEEEESSSH--------------HHHHHHHHHHHHT-T--EEEEEEEET
T ss_pred eeeeeeecccc-------ccc-ccccccCCCEEEEecCCH--------------HHHHHHHHHHHHc-C-CCEEEEEeec
Confidence 56777777775 343 347778999999986431 1223356678776 4 3688888765
Q ss_pred eec
Q 037479 165 VWG 167 (492)
Q Consensus 165 v~~ 167 (492)
.+|
T Consensus 128 ~~G 130 (135)
T PF00899_consen 128 FYG 130 (135)
T ss_dssp TEE
T ss_pred CEE
Confidence 544
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.12 Score=48.33 Aligned_cols=129 Identities=22% Similarity=0.132 Sum_probs=74.4
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTH 78 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~ 78 (492)
.++-+++++|+|.| .|-+|+++++.|.+.| |+++.+.....-..+-..|.. .+-.... .-+++++-.|
T Consensus 15 ~q~~L~~~~VlivG-~GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-- 89 (228)
T cd00757 15 GQEKLKNARVLVVG-AGGLGSPAAEYLAAAG--VGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP-- 89 (228)
T ss_pred HHHHHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC--
Confidence 35667889999999 7779999999999987 477777654432222111100 0000111 1223333322
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
.-++..+..+++ .++ ...+++++|+||.|.... . .-..+-++|.+. + ..+|
T Consensus 90 -----~~~i~~~~~~i~-------~~~-~~~~~~~~DvVi~~~d~~------~--------~r~~l~~~~~~~-~-ip~i 140 (228)
T cd00757 90 -----DVEIEAYNERLD-------AEN-AEELIAGYDLVLDCTDNF------A--------TRYLINDACVKL-G-KPLV 140 (228)
T ss_pred -----CCEEEEecceeC-------HHH-HHHHHhCCCEEEEcCCCH------H--------HHHHHHHHHHHc-C-CCEE
Confidence 134566666654 333 346778999999987531 1 112355677775 4 4688
Q ss_pred Eeeeceeecc
Q 037479 159 HVSTAFVWGE 168 (492)
Q Consensus 159 ~vST~~v~~~ 168 (492)
+.++....|.
T Consensus 141 ~~g~~g~~g~ 150 (228)
T cd00757 141 SGAVLGFEGQ 150 (228)
T ss_pred EEEeccCEEE
Confidence 8877655543
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.024 Score=56.31 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=31.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
+.++|.|.||||++|..|++.|.++++.+..+..+...
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~ 43 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA 43 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc
Confidence 45799999999999999999998877766677666443
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.14 Score=49.22 Aligned_cols=128 Identities=15% Similarity=0.147 Sum_probs=74.7
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTH 78 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~ 78 (492)
-++-+++.+|+|.| .|-+|+.+++.|.+.| |+++.++....-..+-..|-. .+-.... .-+++++-.|
T Consensus 21 ~Q~kL~~s~VlIvG-~GGLGs~va~~LA~aG--VG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP-- 95 (287)
T PRK08223 21 EQQRLRNSRVAIAG-LGGVGGIHLLTLARLG--IGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINP-- 95 (287)
T ss_pred HHHHHhcCCEEEEC-CCHHHHHHHHHHHHhC--CCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCC--
Confidence 35567889999999 5679999999999987 478888766544333222210 0001111 1233333333
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
.-+|+.+...++ .++ ...+++++|+|+.+.-... ...-..+-++|.+. + ..+|
T Consensus 96 -----~v~V~~~~~~l~-------~~n-~~~ll~~~DlVvD~~D~~~------------~~~r~~ln~~c~~~-~-iP~V 148 (287)
T PRK08223 96 -----ELEIRAFPEGIG-------KEN-ADAFLDGVDVYVDGLDFFE------------FDARRLVFAACQQR-G-IPAL 148 (287)
T ss_pred -----CCEEEEEecccC-------ccC-HHHHHhCCCEEEECCCCCc------------HHHHHHHHHHHHHc-C-CCEE
Confidence 145667777776 333 3477789999996652111 11123355677776 4 4578
Q ss_pred Eeeecee
Q 037479 159 HVSTAFV 165 (492)
Q Consensus 159 ~vST~~v 165 (492)
+.|....
T Consensus 149 ~~~~~g~ 155 (287)
T PRK08223 149 TAAPLGM 155 (287)
T ss_pred EEeccCC
Confidence 8765443
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.13 Score=51.56 Aligned_cols=127 Identities=17% Similarity=0.070 Sum_probs=75.8
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~~ 79 (492)
++-+++.+|+|.|+ |-+|+.+++.|.+.| |+++.++....-..+-..|-. .+-.... .-.+|++..|.
T Consensus 23 q~~L~~~~VlivG~-GGlGs~~a~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~-- 97 (355)
T PRK05597 23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAG--VGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPD-- 97 (355)
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCC--
Confidence 55678899999995 789999999999877 478888877643332222210 0000111 12234443331
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
-+++.+...++ .++. ..+++++|+||.|... .. .-..+-++|.+. + ..||+
T Consensus 98 -----v~v~~~~~~i~-------~~~~-~~~~~~~DvVvd~~d~------~~--------~r~~~n~~c~~~-~-ip~v~ 148 (355)
T PRK05597 98 -----VKVTVSVRRLT-------WSNA-LDELRDADVILDGSDN------FD--------TRHLASWAAARL-G-IPHVW 148 (355)
T ss_pred -----cEEEEEEeecC-------HHHH-HHHHhCCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEEE
Confidence 45666666666 3333 3677899999998742 11 111245567775 4 45888
Q ss_pred eeeceeec
Q 037479 160 VSTAFVWG 167 (492)
Q Consensus 160 vST~~v~~ 167 (492)
.++....|
T Consensus 149 ~~~~g~~g 156 (355)
T PRK05597 149 ASILGFDA 156 (355)
T ss_pred EEEecCeE
Confidence 87655554
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.16 Score=46.31 Aligned_cols=128 Identities=17% Similarity=0.228 Sum_probs=74.2
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHH---HHHhhcC----hhhHHHHHhcCCc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRF---HNEIIGK----DLFRVLKEKNGTH 78 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~---~~~~~~~----~~f~~l~~~~~~~ 78 (492)
-++-+++++|+|.|+.| +|..+++.|...| |+++.++....-..+-..|. ..+-... ...++|++-.|.
T Consensus 15 ~Q~~L~~s~VlIiG~gg-lG~evak~La~~G--Vg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~- 90 (197)
T cd01492 15 AQKRLRSARILLIGLKG-LGAEIAKNLVLSG--IGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPR- 90 (197)
T ss_pred HHHHHHhCcEEEEcCCH-HHHHHHHHHHHcC--CCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCC-
Confidence 35667889999999777 9999999999987 57887776543322111110 0000111 122334444332
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
-+++++...+++ . ....+++.|+||.+... .... ..+-++|++. ++ .||
T Consensus 91 ------v~i~~~~~~~~~-------~--~~~~~~~~dvVi~~~~~------~~~~--------~~ln~~c~~~-~i-p~i 139 (197)
T cd01492 91 ------VKVSVDTDDISE-------K--PEEFFSQFDVVVATELS------RAEL--------VKINELCRKL-GV-KFY 139 (197)
T ss_pred ------CEEEEEecCccc-------c--HHHHHhCCCEEEECCCC------HHHH--------HHHHHHHHHc-CC-CEE
Confidence 355555555541 1 12556889999976431 1222 2244678776 54 689
Q ss_pred Eeeeceeecc
Q 037479 159 HVSTAFVWGE 168 (492)
Q Consensus 159 ~vST~~v~~~ 168 (492)
+.++...+|.
T Consensus 140 ~~~~~G~~G~ 149 (197)
T cd01492 140 ATGVHGLFGF 149 (197)
T ss_pred EEEecCCEEE
Confidence 9888766654
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.16 Score=49.83 Aligned_cols=113 Identities=16% Similarity=0.084 Sum_probs=69.7
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+|.|+||+|.+|.+++..|+..+ -+..+.++.+.+ .......+. +.. ....+....
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~-~~~elvL~Di~~-a~g~a~DL~---------------------~~~-~~~~i~~~~ 56 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQP-YVSELSLYDIAG-AAGVAADLS---------------------HIP-TAASVKGFS 56 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCcEEEEecCCC-CcEEEchhh---------------------cCC-cCceEEEec
Confidence 58999999999999999888764 345677777654 111000010 000 001111100
Q ss_pred CCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 94 ITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
. +.+ ....++++|+||-+||..+- .....+.+..|+.-.+.+.+..++. +.+.++.+
T Consensus 57 -~-------~~~-~~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~iiiv 114 (312)
T TIGR01772 57 -G-------EEG-LENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMILV 114 (312)
T ss_pred -C-------CCc-hHHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEEEE
Confidence 0 111 22567899999999997543 3455678999999999999888876 44444443
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.21 Score=48.55 Aligned_cols=117 Identities=18% Similarity=0.124 Sum_probs=73.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|.|+|| |.+|+.++..|+..+.. ..++++.+.+..... ..+ ++.....+. ...+. +.+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~~~~~G-~a~--DL~~~~~~~--------------~~~~~-i~~ 60 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINEEKAEG-VAL--DLSHAAAPL--------------GSDVK-ITG 60 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEcccccccc-hhc--chhhcchhc--------------cCceE-Eec
Confidence 58999999 99999999999766542 277888887433221 111 111111110 11111 222
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
| .+ . ..++++|+|+-+||..+-. ..-.+.++.|..-.+.+.+...+. ..+.++.+=|
T Consensus 61 ~----------~~-y-~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvt 118 (313)
T COG0039 61 D----------GD-Y-EDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVT 118 (313)
T ss_pred C----------CC-h-hhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEec
Confidence 2 11 2 4558999999999876533 455678999999999999888876 4456666554
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.22 Score=51.01 Aligned_cols=118 Identities=16% Similarity=0.107 Sum_probs=73.1
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhh---C---CCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRV---Q---PNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~---g---~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
--+|.|+||+|.+|.+++-.|+.. | .-+..++++.+.++....... ++...-. .+ ..
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~am---DL~daa~-------------~~-~~ 162 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAM---ELEDSLY-------------PL-LR 162 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHH---HHHHhhh-------------hh-cC
Confidence 358999999999999999999875 1 223356777665543322111 1211110 00 11
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHh-ccccee-EEEee
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKK-CAKLIV-LVHVS 161 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~~-~V~vS 161 (492)
++.+..+| . ..++++|+||-+||..+- .+.-.+.++.|+.-.+.+.+...+ . +... +|.+|
T Consensus 163 ~v~i~~~~-------------y-e~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a-~p~~ivIVVs 226 (444)
T PLN00112 163 EVSIGIDP-------------Y-EVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVA-SRNVKVIVVG 226 (444)
T ss_pred ceEEecCC-------------H-HHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEcC
Confidence 23222222 1 445899999999997543 345567899999999999999988 4 3333 44444
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.03 Score=53.81 Aligned_cols=77 Identities=22% Similarity=0.325 Sum_probs=50.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
..++|-|||||.|+-++|+|.++|.+- .+..|+.. + .+.++.+.+.++ ..+.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~---aLAgRs~~------k----------l~~l~~~LG~~~--------~~~p- 58 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTA---ALAGRSSA------K----------LDALRASLGPEA--------AVFP- 58 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCch---hhccCCHH------H----------HHHHHHhcCccc--------cccC-
Confidence 478999999999999999999998643 34445421 1 223444433211 1111
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccC
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTN 125 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~ 125 (492)
+. .++..+++++.+++|+||+|+..
T Consensus 59 -~~-------~p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 59 -LG-------VPAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred -CC-------CHHHHHHHHhcceEEEecccccc
Confidence 11 34556688899999999999754
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.058 Score=53.97 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=28.7
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.++|.|+||||++|+.|++.|++. +.+ ++..++++.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~-p~~-el~~~~~s~ 38 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANH-PWF-EVTALAASE 38 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEEcCh
Confidence 479999999999999999999864 444 666665554
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.066 Score=60.38 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=51.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCC------------eEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCc
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVK------------KLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTH 78 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~------------~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~ 78 (492)
++++|+|.|| |++|+..++.|.+. +++. .|.+..+... ..+++.+ .
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~~---~a~~la~-------------~---- 625 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYLK---DAKETVE-------------G---- 625 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCHH---HHHHHHH-------------h----
Confidence 3679999996 99999999999875 3332 2333333221 1222211 0
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccc
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAAT 123 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~ 123 (492)
.+++..+..|++ +.+.+..+++++|+||.|...
T Consensus 626 -----~~~~~~v~lDv~-------D~e~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 626 -----IENAEAVQLDVS-------DSESLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred -----cCCCceEEeecC-------CHHHHHHhhcCCCEEEECCCc
Confidence 135677888988 555555777889999999875
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.15 Score=51.76 Aligned_cols=128 Identities=18% Similarity=0.116 Sum_probs=75.4
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~~ 79 (492)
++-+++.+|+|.| .|-+|..++..|.+.| |++|.++....-..+-..|-. .+-.... .-..|++..|
T Consensus 37 q~~L~~~~VlviG-~GGlGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np--- 110 (392)
T PRK07878 37 QKRLKNARVLVIG-AGGLGSPTLLYLAAAG--VGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINP--- 110 (392)
T ss_pred HHHHhcCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCC---
Confidence 4456788999999 6679999999999987 478877765543332222210 0000111 1223333333
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-+++.+...++ ..+ ...+++++|+||.|... .. .-..+-++|.+. + +.||+
T Consensus 111 ----~v~i~~~~~~i~-------~~~-~~~~~~~~D~Vvd~~d~------~~--------~r~~ln~~~~~~-~-~p~v~ 162 (392)
T PRK07878 111 ----LVNVRLHEFRLD-------PSN-AVELFSQYDLILDGTDN------FA--------TRYLVNDAAVLA-G-KPYVW 162 (392)
T ss_pred ----CcEEEEEeccCC-------hhH-HHHHHhcCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEEE
Confidence 134666666666 333 23677899999987632 11 112255677776 4 46898
Q ss_pred eeeceeecc
Q 037479 160 VSTAFVWGE 168 (492)
Q Consensus 160 vST~~v~~~ 168 (492)
.++...+|.
T Consensus 163 ~~~~g~~G~ 171 (392)
T PRK07878 163 GSIYRFEGQ 171 (392)
T ss_pred EEeccCEEE
Confidence 887766664
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.12 Score=48.57 Aligned_cols=116 Identities=22% Similarity=0.200 Sum_probs=77.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+.+|.|.||.|-||+-|.. ||+..|.|..+.+..-.. ..-|.
T Consensus 28 ~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~-------------------------------------~~GVa 69 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIAN-------------------------------------TPGVA 69 (345)
T ss_pred cceEEEEecCCccCccHHH-HHhcCcccceeeeeeccc-------------------------------------CCccc
Confidence 4689999999999998876 556678887654443211 11122
Q ss_pred cCCCCCC-----CCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 92 GDITRED-----LGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 92 gDl~~~~-----lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
.|+++-+ .|-..++.++..++++|+|+-=||.-+-. -.-++.+++|..-.+.+..++.++ ..+.+|.+=|--|
T Consensus 70 aDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIsNPV 148 (345)
T KOG1494|consen 70 ADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC-CPNALILVISNPV 148 (345)
T ss_pred ccccccCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh-CccceeEeecCcc
Confidence 2322221 12223445678889999999999976543 345778999999999999998886 4456666555434
Q ss_pred e
Q 037479 166 W 166 (492)
Q Consensus 166 ~ 166 (492)
|
T Consensus 149 N 149 (345)
T KOG1494|consen 149 N 149 (345)
T ss_pred c
Confidence 4
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.29 Score=48.06 Aligned_cols=114 Identities=16% Similarity=0.162 Sum_probs=70.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|.|.|+ |.+|+.++..|+..|. ...|+++.|...... .+..++.....+ ....+....+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~-~~ei~l~D~~~~~~~---~~a~dL~~~~~~--------------~~~~~~i~~~ 61 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGI-ADELVLIDINEEKAE---GEALDLEDALAF--------------LPSPVKIKAG 61 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhh---HhHhhHHHHhhc--------------cCCCeEEEcC
Confidence 47999995 9999999999998774 236788888654321 111111110000 0112222211
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
+ . ..++++|+||.+++..+- .+.-.+.++.|..-.+.+.+..++. +.+.+|.+
T Consensus 62 ----------~---~-~~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~-~~~~~viv 115 (306)
T cd05291 62 ----------D---Y-SDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFLV 115 (306)
T ss_pred ----------C---H-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 1 234799999999997543 2345677899999999999999886 44444443
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.079 Score=52.85 Aligned_cols=33 Identities=18% Similarity=0.390 Sum_probs=26.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
++|+|.||||++|+.+++.|.+. +.+ ++.++.+
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~-p~~-elv~v~~ 35 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNH-PEV-EIVAVTS 35 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEEC
Confidence 79999999999999999999875 444 5555555
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.43 Score=48.96 Aligned_cols=121 Identities=11% Similarity=0.050 Sum_probs=70.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh---CCCCC-eEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 13 KTILVTGATGFLAKIFVEKILRV---QPNVK-KLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~---g~~V~-~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-+|+||||+|.+|.+|+-.|.+- |++-. .+.++..+... ...+-...++..+.. . +...+.
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~-~~l~G~amDL~D~a~-------------p-ll~~v~ 188 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENL-EKLKGLVMEVEDLAF-------------P-LLRGIS 188 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCch-hhHHHHHHHHHHhHH-------------h-hcCCcE
Confidence 57999999999999999998761 32211 34444443221 111111112221110 0 012233
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhccc-ceeEEEeee
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAK-LIVLVHVST 162 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~V~vST 162 (492)
+..+| ...++++|+||-+||..+- .....+.++.|+.-.+.+.+...+... -.+++.+.|
T Consensus 189 i~~~~--------------~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 189 VTTDL--------------DVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred EEECC--------------HHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 33211 2556899999999997543 345677899999999999998887633 134444443
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.32 Score=46.43 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=31.5
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+-+++.+|+|.| .|-+|+++++.|.+.| |+++.++....
T Consensus 26 ~kL~~s~VlVvG-~GGVGs~vae~Lar~G--Vg~itLiD~D~ 64 (268)
T PRK15116 26 QLFADAHICVVG-IGGVGSWAAEALARTG--IGAITLIDMDD 64 (268)
T ss_pred HHhcCCCEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCE
Confidence 346788999998 7789999999999987 47777776543
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.27 Score=46.01 Aligned_cols=122 Identities=21% Similarity=0.230 Sum_probs=69.7
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~~ 79 (492)
++-+++.+|+|.| .|-+|+++++.|.+.| |.+++++....-..+-..|.. .+-.... .-+++++-.|
T Consensus 6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~G--Vg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP--- 79 (231)
T cd00755 6 LEKLRNAHVAVVG-LGGVGSWAAEALARSG--VGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINP--- 79 (231)
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCC---
Confidence 4556789999999 6779999999999987 478888765543322222210 0001111 1223333333
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhc-cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMW-NKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~-~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
.-+++.+...++ .+.. ..++ ++.|+||.|.... .....+.+.|.+. ++ .||
T Consensus 80 ----~~~V~~~~~~i~-------~~~~-~~l~~~~~D~VvdaiD~~--------------~~k~~L~~~c~~~-~i-p~I 131 (231)
T cd00755 80 ----ECEVDAVEEFLT-------PDNS-EDLLGGDPDFVVDAIDSI--------------RAKVALIAYCRKR-KI-PVI 131 (231)
T ss_pred ----CcEEEEeeeecC-------HhHH-HHHhcCCCCEEEEcCCCH--------------HHHHHHHHHHHHh-CC-CEE
Confidence 245666666666 2232 2444 4799999986421 1223466788876 43 455
Q ss_pred Eeee
Q 037479 159 HVST 162 (492)
Q Consensus 159 ~vST 162 (492)
...+
T Consensus 132 ~s~g 135 (231)
T cd00755 132 SSMG 135 (231)
T ss_pred EEeC
Confidence 5544
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.3 Score=49.18 Aligned_cols=118 Identities=16% Similarity=0.117 Sum_probs=69.7
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCC-----eEEEE--EecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVK-----KLYLL--LRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~-----~i~~l--vR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
--+|.|+||+|.+|.+++-.|+..+- +. .++++ .+.++..... .+ ++..... .+ .
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l-~~~~~ei~L~L~diD~~~~~a~g~-a~--DL~d~a~-------------~~-~ 105 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEV-FGQDQPIALKLLGSERSKEALEGV-AM--ELEDSLY-------------PL-L 105 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEeccCccchhhhHH-HH--HHHHhhh-------------hh-c
Confidence 35899999999999999999987553 22 12222 3322221111 11 1211110 00 1
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeE-EEee
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVL-VHVS 161 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~-V~vS 161 (492)
.++.+..+| . ..++++|+||-+||..+- .+.-.+.+..|+.-.+.+.+..++..+...+ |.+|
T Consensus 106 ~~v~i~~~~-------------y-~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 106 REVSIGIDP-------------Y-EVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred CceEEecCC-------------H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 223222221 1 445899999999997543 3456678999999999999999885334444 4444
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.39 Score=44.97 Aligned_cols=128 Identities=20% Similarity=0.220 Sum_probs=74.8
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH----HHhhcCh----hhHHHHHhcCCc
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH----NEIIGKD----LFRVLKEKNGTH 78 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~----~~~~~~~----~f~~l~~~~~~~ 78 (492)
++-+++.+|+|.| .|-+|+.+++.|.+.| |++++++....-..+-..|-. +.+-... .-.++++-.|
T Consensus 22 q~~L~~~~VlIiG-~GGlGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np-- 96 (231)
T PRK08328 22 QEKLKKAKVAVVG-VGGLGSPVAYYLAAAG--VGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNS-- 96 (231)
T ss_pred HHHHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCC--
Confidence 4556788999999 6779999999999987 478888866543333222210 0000000 0112222222
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
.-+++.+.+.++ +++ .+.++++.|+||.|.... .. -..+-++|++. + ..+|
T Consensus 97 -----~v~v~~~~~~~~-------~~~-~~~~l~~~D~Vid~~d~~------~~--------r~~l~~~~~~~-~-ip~i 147 (231)
T PRK08328 97 -----DIKIETFVGRLS-------EEN-IDEVLKGVDVIVDCLDNF------ET--------RYLLDDYAHKK-G-IPLV 147 (231)
T ss_pred -----CCEEEEEeccCC-------HHH-HHHHHhcCCEEEECCCCH------HH--------HHHHHHHHHHc-C-CCEE
Confidence 134556666555 333 346778999999986431 11 11234567775 4 4688
Q ss_pred Eeeeceeecc
Q 037479 159 HVSTAFVWGE 168 (492)
Q Consensus 159 ~vST~~v~~~ 168 (492)
+.++...+|.
T Consensus 148 ~g~~~g~~G~ 157 (231)
T PRK08328 148 HGAVEGTYGQ 157 (231)
T ss_pred EEeeccCEEE
Confidence 8888776664
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.34 Score=47.43 Aligned_cols=115 Identities=12% Similarity=0.119 Sum_probs=72.3
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc-CceEEEec
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS-EKITLVPG 92 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~-~~v~~v~g 92 (492)
+|.|.|+ |.+|..++..|+..+ -+..+.++...+...... .+ ++..... +.. .++.+..+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~a~g~-a~--DL~~~~~--------------~~~~~~~~i~~~ 61 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALG-LFSEIVLIDVNEGVAEGE-AL--DFHHATA--------------LTYSTNTKIRAG 61 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCcchhhHH-HH--HHHhhhc--------------cCCCCCEEEEEC
Confidence 5789997 999999999998764 356777777644322211 11 1111111 111 13444333
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chh--HHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DER--YDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~--~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
| . +.++++|+||-+||..+- .+. -.+.+..|+.-.+.+.+..++. +...++.+-|
T Consensus 62 ~-------------y-~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivvs 119 (307)
T cd05290 62 D-------------Y-DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILIT 119 (307)
T ss_pred C-------------H-HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 3 1 445899999999997543 233 3677999999999999999887 4555555443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.1 Score=43.68 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=27.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
++|.|.|++|-+|+.+++.+++. +++.-+-++.|+.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 58999999999999999999983 3443344455554
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.29 Score=48.04 Aligned_cols=115 Identities=18% Similarity=0.105 Sum_probs=71.3
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|.|+|+ |.+|..++..|+..+ -+..+.++.+.++..... .+ ++.....| . ....+..
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~g~-a~--Dl~~~~~~--------------~-~~~~v~~ 62 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKG-LADELVLVDVVEDKLKGE-AM--DLQHGSAF--------------L-KNPKIEA 62 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHH-HH--HHHHhhcc--------------C-CCCEEEE
Confidence 369999996 999999999888765 345778887755322111 11 12111110 0 1112221
Q ss_pred -cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhccccee-EEEee
Q 037479 92 -GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIV-LVHVS 161 (492)
Q Consensus 92 -gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~-~V~vS 161 (492)
+| . +.++++|+||-+||..+- .+.-.+.+..|..-.+.+.+..++. +.+. ++.+|
T Consensus 63 ~~d-------------y-~~~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vivvs 120 (312)
T cd05293 63 DKD-------------Y-SVTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY-SPNAILLVVS 120 (312)
T ss_pred CCC-------------H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEcc
Confidence 22 1 225899999999997543 3445677899999999999998887 4443 34344
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.15 Score=50.55 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=30.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHh-hCCCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILR-VQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~-~g~~V~~i~~lvR~ 48 (492)
++++|.|.||||++|..+++.|.+ ...++.++..+...
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK 42 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence 347999999999999999998884 56666667666544
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.53 Score=47.67 Aligned_cols=127 Identities=19% Similarity=0.118 Sum_probs=72.5
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~~ 79 (492)
++-+++++|+|.| .|-+|+.++..|.+.| |+++.++.+..-..+-..|-. .+-.... .-+++++..|.
T Consensus 130 q~~l~~~~VlvvG-~GG~Gs~ia~~La~~G--vg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~-- 204 (376)
T PRK08762 130 QRRLLEARVLLIG-AGGLGSPAALYLAAAG--VGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD-- 204 (376)
T ss_pred HHHHhcCcEEEEC-CCHHHHHHHHHHHHcC--CCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC--
Confidence 4456888999998 5779999999999987 478888877633222222200 0000001 11223332221
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
-+++.+...++ ... ...+++++|+||+|.... .. -..+-++|.+. + ..+|+
T Consensus 205 -----v~v~~~~~~~~-------~~~-~~~~~~~~D~Vv~~~d~~------~~--------r~~ln~~~~~~-~-ip~i~ 255 (376)
T PRK08762 205 -----VQVEAVQERVT-------SDN-VEALLQDVDVVVDGADNF------PT--------RYLLNDACVKL-G-KPLVY 255 (376)
T ss_pred -----CEEEEEeccCC-------hHH-HHHHHhCCCEEEECCCCH------HH--------HHHHHHHHHHc-C-CCEEE
Confidence 23445555554 222 346678999999987531 11 11255677776 4 46888
Q ss_pred eeeceeec
Q 037479 160 VSTAFVWG 167 (492)
Q Consensus 160 vST~~v~~ 167 (492)
.++....|
T Consensus 256 ~~~~g~~g 263 (376)
T PRK08762 256 GAVFRFEG 263 (376)
T ss_pred EEeccCEE
Confidence 87655444
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.18 Score=54.87 Aligned_cols=123 Identities=15% Similarity=0.101 Sum_probs=75.1
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHH--HhhcChh----hHHHHHhcCCch
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN--EIIGKDL----FRVLKEKNGTHL 79 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~--~~~~~~~----f~~l~~~~~~~~ 79 (492)
-++-+++.+|+|.|+ | +|+++++.|.+.|- |+++++.....-..+-..|..- .=++.+. -.++++-.|
T Consensus 101 ~Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp--- 174 (722)
T PRK07877 101 EQERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDP--- 174 (722)
T ss_pred HHHHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCC---
Confidence 356678899999999 8 99999999999872 3678887766555444555210 0011111 122222222
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-+|+.+...++ .+. .+.+++++|+|+.|.-. . ..-..+-+.|.+. + ..+|+
T Consensus 175 ----~i~v~~~~~~i~-------~~n-~~~~l~~~DlVvD~~D~------~--------~~R~~ln~~a~~~-~-iP~i~ 226 (722)
T PRK07877 175 ----YLPVEVFTDGLT-------EDN-VDAFLDGLDVVVEECDS------L--------DVKVLLREAARAR-R-IPVLM 226 (722)
T ss_pred ----CCEEEEEeccCC-------HHH-HHHHhcCCCEEEECCCC------H--------HHHHHHHHHHHHc-C-CCEEE
Confidence 246777777777 333 45778999999998631 1 1112244667775 4 34676
Q ss_pred eee
Q 037479 160 VST 162 (492)
Q Consensus 160 vST 162 (492)
-|+
T Consensus 227 ~~~ 229 (722)
T PRK07877 227 ATS 229 (722)
T ss_pred EcC
Confidence 664
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.29 Score=49.67 Aligned_cols=128 Identities=15% Similarity=0.071 Sum_probs=76.7
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHH--H--HHHhhc---ChhhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVR--F--HNEIIG---KDLFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r--~--~~~~~~---~~~f~~l~~~~~~~~ 79 (492)
++-+++.+|+|.| .|-+|..+++.|.+.| |+++.+.....-..+-..| + .+.+=. .....+|++..|
T Consensus 33 q~~L~~~~VlivG-~GGlG~~va~~La~~G--vg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np--- 106 (390)
T PRK07411 33 QKRLKAASVLCIG-TGGLGSPLLLYLAAAG--IGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINP--- 106 (390)
T ss_pred HHHHhcCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCC---
Confidence 4567788999999 5668999999999987 4788877665433332222 0 001100 112334444443
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-+|+.+...++ .+. ...+++++|+||.|... ... -..+-++|.+. + +.+|+
T Consensus 107 ----~v~v~~~~~~~~-------~~~-~~~~~~~~D~Vvd~~d~------~~~--------r~~ln~~~~~~-~-~p~v~ 158 (390)
T PRK07411 107 ----YCQVDLYETRLS-------SEN-ALDILAPYDVVVDGTDN------FPT--------RYLVNDACVLL-N-KPNVY 158 (390)
T ss_pred ----CCeEEEEecccC-------HHh-HHHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEE
Confidence 246777777777 333 23677899999998752 111 11234566665 3 56888
Q ss_pred eeeceeecc
Q 037479 160 VSTAFVWGE 168 (492)
Q Consensus 160 vST~~v~~~ 168 (492)
.+...-+|.
T Consensus 159 ~~~~g~~g~ 167 (390)
T PRK07411 159 GSIFRFEGQ 167 (390)
T ss_pred EEEccCEEE
Confidence 877665553
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.064 Score=52.22 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=31.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+++|.|.||||-+|+.+++.|.++.+.+..+.++...+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~r 38 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASAR 38 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEeccc
Confidence 46899999999999999999999778887676665543
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.16 Score=42.81 Aligned_cols=92 Identities=15% Similarity=0.231 Sum_probs=60.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++|++.| +| .|..+++.|.+.|++| .++..++.. .+..+ ...+..+
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~G~~V---iaIDi~~~a---V~~a~------------------------~~~~~~v 63 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKESGFDV---IVIDINEKA---VEKAK------------------------KLGLNAF 63 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHCCCEE---EEEECCHHH---HHHHH------------------------HhCCeEE
Confidence 347899999 66 7888899999888654 677665431 22211 1457899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
.+|+.+|++ .+.+++|.|+-+= .. .+. ...++++|++. +..-+|
T Consensus 64 ~dDlf~p~~---------~~y~~a~liysir----pp---~el-------~~~~~~la~~~-~~~~~i 107 (134)
T PRK04148 64 VDDLFNPNL---------EIYKNAKLIYSIR----PP---RDL-------QPFILELAKKI-NVPLII 107 (134)
T ss_pred ECcCCCCCH---------HHHhcCCEEEEeC----CC---HHH-------HHHHHHHHHHc-CCCEEE
Confidence 999997642 5558899998542 21 111 13478899987 555433
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.092 Score=51.92 Aligned_cols=38 Identities=32% Similarity=0.377 Sum_probs=31.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
++++|.|.||||++|..|++.|.++.+.+.++..+...
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 57899999999999999999888765566677777543
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.59 Score=40.06 Aligned_cols=120 Identities=23% Similarity=0.243 Sum_probs=68.2
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcChh----hHHHHHhcCCchhhhccCc
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKDL----FRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~~----f~~l~~~~~~~~~~~~~~~ 86 (492)
+|+|.|+ |-+|+.++..|.+.|. +++.+.....-..+-..|.. .+-...+. -+.+++-.| .-+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p-------~v~ 70 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNP-------GVN 70 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCC-------CcE
Confidence 5899995 8899999999999875 67777755432222111110 00011111 122222222 134
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
++.+..++. .... ...+++.|+||.|... ......+.++|++. + ..||.+++....
T Consensus 71 i~~~~~~~~-------~~~~-~~~~~~~diVi~~~d~--------------~~~~~~l~~~~~~~-~-i~~i~~~~~g~~ 126 (143)
T cd01483 71 VTAVPEGIS-------EDNL-DDFLDGVDLVIDAIDN--------------IAVRRALNRACKEL-G-IPVIDAGGLGLG 126 (143)
T ss_pred EEEEeeecC-------hhhH-HHHhcCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEEcCCCcE
Confidence 556666655 2222 3666899999998753 11223466778876 4 468888776544
Q ss_pred c
Q 037479 167 G 167 (492)
Q Consensus 167 ~ 167 (492)
|
T Consensus 127 g 127 (143)
T cd01483 127 G 127 (143)
T ss_pred E
Confidence 4
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.18 Score=52.37 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=28.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
+++++|+|||++| +|...++.|++.|.+ |.+..+.
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~---V~~~d~~ 37 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGAN---VTVNDGK 37 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCE---EEEEcCC
Confidence 4689999999988 999999999999964 4665544
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.076 Score=54.76 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=27.3
Q ss_pred cCCCEEEEeCC----------------cchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGA----------------TGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGa----------------tGflG~~l~~~Ll~~g~~V 39 (492)
++||+||||+| ||-+|..|++.+...|.+|
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~V 299 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEV 299 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcE
Confidence 68999999976 6889999999999999876
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.42 Score=47.14 Aligned_cols=117 Identities=21% Similarity=0.166 Sum_probs=70.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+.++|.|+|| |.+|..++..|+..|. ..|.++.+.+..... +.+. +... . ........ +
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~--~~l~L~Di~~~~~~g-~~lD--l~~~---~-----------~~~~~~~~-i 62 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL--GDVVLYDVIKGVPQG-KALD--LKHF---S-----------TLVGSNIN-I 62 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC--CeEEEEECCCccchh-HHHH--Hhhh---c-----------cccCCCeE-E
Confidence 5689999997 9999999998887663 467777776543322 1111 1000 0 00001111 1
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhccccee-EEEee
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIV-LVHVS 161 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~-~V~vS 161 (492)
.+ ..+ . +.++++|+||-+|+.... .....+.+..|..-.+.+.+...+. ..+. ++.+|
T Consensus 63 ~~----------~~d-~-~~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvs 122 (319)
T PTZ00117 63 LG----------TNN-Y-EDIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVT 122 (319)
T ss_pred Ee----------CCC-H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 11 011 3 355899999999987543 2345667888988888888888776 4444 45554
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.49 Score=45.30 Aligned_cols=113 Identities=17% Similarity=0.046 Sum_probs=68.2
Q ss_pred EEEeCCcchhhHHHHHHHHhhCC-CCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQP-NVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~-~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
|.|+||+|.+|..++..|+..+. .+..|++..+.+........ ++... . ... ....+..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~---dl~~~------~--------~~~-~~~~i~~-- 60 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAM---DLQDA------V--------EPL-ADIKVSI-- 60 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHH---HHHHh------h--------hhc-cCcEEEE--
Confidence 57999999999999999988761 34577888776533222111 11000 0 000 0111111
Q ss_pred CCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 94 ITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
+ .+ ..+.++++|+||-+|+..+.. ..-......|+.-.+.+.+..++. ..+.++
T Consensus 61 -~--------~d-~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~-~p~a~~ 115 (263)
T cd00650 61 -T--------DD-PYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY-SPDAWI 115 (263)
T ss_pred -C--------Cc-hHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEE
Confidence 1 11 235668999999999876543 334556788999999999988876 334333
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.94 Score=44.47 Aligned_cols=115 Identities=17% Similarity=0.142 Sum_probs=69.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|.|+ |.+|..++..|+..|. +..|.++.|........ .+ ++.....+ ........+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~~~g~-a~--dl~~~~~~---------------~~~~~i~~~ 60 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAKAEGE-AM--DLAHGTPF---------------VKPVRIYAG 60 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchhhhhH-HH--HHHccccc---------------cCCeEEeeC
Confidence 57999997 9999999999998873 34678888764322110 00 11110000 011111111
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
+ . ..++++|+||-+|+...- ..+.......|+.-.+.+.+..++. +.+.++.+-|
T Consensus 61 ----------d---~-~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~-~~~giiiv~t 116 (308)
T cd05292 61 ----------D---Y-ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY-APDAILLVVT 116 (308)
T ss_pred ----------C---H-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 1 2 335899999999997532 3445567888999999888888876 3444444443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.93 Score=45.23 Aligned_cols=115 Identities=16% Similarity=0.134 Sum_probs=70.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|.|+|+ |.+|+.++..|+..+. ...+.++.+.+...... .+ ++..... +. ..+. +.+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l-~~el~LiDi~~~~~~g~-a~--DL~~~~~--------------~~-~~~~-i~~ 96 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDL-ADELALVDVNPDKLRGE-ML--DLQHAAA--------------FL-PRTK-ILA 96 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCCchhhHH-HH--HHHhhhh--------------cC-CCCE-EEe
Confidence 69999996 9999999999987653 45677877754322211 11 1211110 11 1222 222
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhccccee-EEEee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIV-LVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~-~V~vS 161 (492)
. .+ . +.++++|+||-+||..+- .+.-.+.+..|+.-.+.+.+..++. +.+. +|.+|
T Consensus 97 ~----------~d-y-~~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~-~p~~ivivvt 154 (350)
T PLN02602 97 S----------TD-Y-AVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY-SPDTILLIVS 154 (350)
T ss_pred C----------CC-H-HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 1 01 1 335899999999997532 3445677889999999999988886 4443 34444
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.1 Score=54.17 Aligned_cols=73 Identities=16% Similarity=0.283 Sum_probs=50.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+|+|+ |.+|+.+++.|.+.|++| +++.|++.. .+.+. + ..++..+.|
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v---~vid~~~~~---~~~~~-------------~----------~~~~~~~~g 50 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDV---TVIDTDEER---LRRLQ-------------D----------RLDVRTVVG 50 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcE---EEEECCHHH---HHHHH-------------h----------hcCEEEEEe
Confidence 58999997 999999999999988754 666664321 11111 0 135788999
Q ss_pred CCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 93 DITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
|.+ +.+.++.+ ++++|+||-+..
T Consensus 51 d~~-------~~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 51 NGS-------SPDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CCC-------CHHHHHHcCCCcCCEEEEecC
Confidence 988 44444455 678999887653
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.55 Score=47.29 Aligned_cols=127 Identities=20% Similarity=0.189 Sum_probs=73.7
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~~ 79 (492)
++-+++.+|+|.| .|-+|..++..|.+.| |++|.+.....-..+-..|-. .+-.+.. .-.+|++-.|
T Consensus 36 q~~l~~~~VliiG-~GglG~~v~~~La~~G--vg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np--- 109 (370)
T PRK05600 36 QERLHNARVLVIG-AGGLGCPAMQSLASAG--VGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP--- 109 (370)
T ss_pred HHHhcCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCC---
Confidence 4556788999999 5779999999999987 478888776543333222210 0001111 1222333222
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-+++.+...++ ... ...+++++|+||.|... .+ .-..+-++|.+. + ..+|+
T Consensus 110 ----~v~i~~~~~~i~-------~~~-~~~~~~~~DlVid~~Dn------~~--------~r~~in~~~~~~-~-iP~v~ 161 (370)
T PRK05600 110 ----DIRVNALRERLT-------AEN-AVELLNGVDLVLDGSDS------FA--------TKFLVADAAEIT-G-TPLVW 161 (370)
T ss_pred ----CCeeEEeeeecC-------HHH-HHHHHhCCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEEE
Confidence 134566666665 333 34677899999998753 11 112244567765 4 45888
Q ss_pred eeeceeec
Q 037479 160 VSTAFVWG 167 (492)
Q Consensus 160 vST~~v~~ 167 (492)
.+...-+|
T Consensus 162 ~~~~g~~G 169 (370)
T PRK05600 162 GTVLRFHG 169 (370)
T ss_pred EEEecCEE
Confidence 87655444
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.63 Score=42.96 Aligned_cols=128 Identities=21% Similarity=0.168 Sum_probs=71.8
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHH---HHHhhcChh----hHHHHHhcCCc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRF---HNEIIGKDL----FRVLKEKNGTH 78 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~---~~~~~~~~~----f~~l~~~~~~~ 78 (492)
.++-+++.+|+|.| .|-+|+.+++.|.+.|. .++.+.....-..+-..|- .++ ..... -.++++-.|
T Consensus 22 ~q~~L~~~~V~ViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~~~~~d-vG~~Ka~~a~~~l~~lnp-- 95 (212)
T PRK08644 22 LLEKLKKAKVGIAG-AGGLGSNIAVALARSGV--GNLKLVDFDVVEPSNLNRQQYFISQ-IGMPKVEALKENLLEINP-- 95 (212)
T ss_pred HHHHHhCCCEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCEeccccccccEeehhh-CCChHHHHHHHHHHHHCC--
Confidence 45667889999999 58899999999999874 7788877763222212221 000 11111 112222222
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
.-+++.+...++ +++ ...+++++|+||.|.- +.. ....+.+.|.+..+ ..+|
T Consensus 96 -----~v~v~~~~~~i~-------~~~-~~~~~~~~DvVI~a~D------~~~--------~r~~l~~~~~~~~~-~p~I 147 (212)
T PRK08644 96 -----FVEIEAHNEKID-------EDN-IEELFKDCDIVVEAFD------NAE--------TKAMLVETVLEHPG-KKLV 147 (212)
T ss_pred -----CCEEEEEeeecC-------HHH-HHHHHcCCCEEEECCC------CHH--------HHHHHHHHHHHhCC-CCEE
Confidence 135566666665 333 3466789999998842 111 12234556666412 4677
Q ss_pred Eeeeceeec
Q 037479 159 HVSTAFVWG 167 (492)
Q Consensus 159 ~vST~~v~~ 167 (492)
+.|...-++
T Consensus 148 ~~~~~~~~~ 156 (212)
T PRK08644 148 AASGMAGYG 156 (212)
T ss_pred EeehhhccC
Confidence 776543333
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.23 Score=49.51 Aligned_cols=38 Identities=8% Similarity=0.205 Sum_probs=31.2
Q ss_pred CEEEEeCCcchhhHHHHHHHH-hhCCCCCeEEEEEecCC
Q 037479 13 KTILVTGATGFLAKIFVEKIL-RVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll-~~g~~V~~i~~lvR~~~ 50 (492)
++|.|.||||-+|+.+++.|. +....+.+++++.-++.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s 39 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQL 39 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhh
Confidence 479999999999999999998 66777777777765543
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.29 Score=46.68 Aligned_cols=32 Identities=19% Similarity=0.378 Sum_probs=24.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
++|.|+|++|.+|+.+++.+.+. +++ .+..++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~-~~~-elvav~ 33 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAA-EDL-ELVAAV 33 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEE
Confidence 68999999999999999877653 444 334433
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.14 Score=49.57 Aligned_cols=37 Identities=27% Similarity=0.415 Sum_probs=31.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.++++++|+|+ |.+|+.++..|...|. .+|++..|+.
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~--~~V~v~~R~~ 157 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGV--AEITIVNRTV 157 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 46789999996 9999999999998773 6789999974
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.85 Score=42.71 Aligned_cols=123 Identities=11% Similarity=0.169 Sum_probs=72.7
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---H-Hh---hcChhhHHHHHhcCCchhhhccCc
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---N-EI---IGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~-~~---~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
+|||.| .|-+|..+++.|...| |+++.++....-..+-..|-. . ++ .....-+.+++..| .-+
T Consensus 1 kVlvvG-~GGlG~eilk~La~~G--vg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np-------~v~ 70 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMG--FGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNP-------NCK 70 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCC-------CCE
Confidence 588998 7789999999999987 478888876544333232210 0 00 00011233333333 246
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+..+..++++. .+.....+++.|+||.+... ...-+.+-++|.+. + ..+|+.+|....
T Consensus 71 i~~~~~~i~~~------~~~~~~f~~~~DvVi~a~Dn--------------~~aR~~ln~~c~~~-~-iplI~~g~~G~~ 128 (234)
T cd01484 71 VVPYQNKVGPE------QDFNDTFFEQFHIIVNALDN--------------IIARRYVNGMLIFL-I-VPLIESGTEGFK 128 (234)
T ss_pred EEEEeccCChh------hhchHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEEcccCCc
Confidence 77777877631 12123567899999987532 22334466677776 4 468888876655
Q ss_pred cc
Q 037479 167 GE 168 (492)
Q Consensus 167 ~~ 168 (492)
|.
T Consensus 129 G~ 130 (234)
T cd01484 129 GN 130 (234)
T ss_pred eE
Confidence 54
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.24 Score=43.84 Aligned_cols=35 Identities=17% Similarity=0.307 Sum_probs=29.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
+.+++|+|.|+++.+|..++..|.+.|. +|++..|
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~---~V~v~~r 76 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNA---TVTVCHS 76 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCC---EEEEEEC
Confidence 5789999999988899999999998874 4566655
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=93.27 E-value=1.3 Score=40.41 Aligned_cols=97 Identities=22% Similarity=0.230 Sum_probs=57.3
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHH--HHHhhcChh----hHHHHHhcCCch
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRF--HNEIIGKDL----FRVLKEKNGTHL 79 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~--~~~~~~~~~----f~~l~~~~~~~~ 79 (492)
.++-+++++|+|.|+ |-+|+.++..|.+.|. ++|++..+..-..+-..|. ..+-..... -..+.+-.|
T Consensus 15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gv--g~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp--- 88 (200)
T TIGR02354 15 IVQKLEQATVAICGL-GGLGSNVAINLARAGI--GKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINP--- 88 (200)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHcCC--CEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCC---
Confidence 456678899999996 6799999999999874 6778877762222112220 000011111 112222222
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEc
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINL 120 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~ 120 (492)
.-++..+..+++ .+. ...+++++|+||-+
T Consensus 89 ----~~~i~~~~~~i~-------~~~-~~~~~~~~DlVi~a 117 (200)
T TIGR02354 89 ----YTEIEAYDEKIT-------EEN-IDKFFKDADIVCEA 117 (200)
T ss_pred ----CCEEEEeeeeCC-------HhH-HHHHhcCCCEEEEC
Confidence 135566666666 333 34677899999988
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.78 Score=44.88 Aligned_cols=122 Identities=16% Similarity=0.204 Sum_probs=70.8
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH----HHh---hcChhhHHHHHhcCCchhhhccCc
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH----NEI---IGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~----~~~---~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
+|||.|+ |-+|..+++.|...| |++|.++....-..+-..|-. +.+ ......+.+++..| .-+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~G--vg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp-------~v~ 70 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTG--FGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNP-------NVK 70 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhc--CCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCC-------CCe
Confidence 5899995 889999999999987 478888765543322222110 000 00011223333322 145
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+..+.+++++. +.....+++.|+|+.+... ...-..+-++|.+. + ..||..+|.+..
T Consensus 71 V~~~~~~i~~~-------~~~~~f~~~~DvVv~a~Dn--------------~~ar~~in~~c~~~-~-ip~I~~gt~G~~ 127 (312)
T cd01489 71 IVAYHANIKDP-------DFNVEFFKQFDLVFNALDN--------------LAARRHVNKMCLAA-D-VPLIESGTTGFL 127 (312)
T ss_pred EEEEeccCCCc-------cchHHHHhcCCEEEECCCC--------------HHHHHHHHHHHHHC-C-CCEEEEecCcce
Confidence 66777777742 1122566899999987642 11223355667765 4 468888877766
Q ss_pred cc
Q 037479 167 GE 168 (492)
Q Consensus 167 ~~ 168 (492)
|.
T Consensus 128 G~ 129 (312)
T cd01489 128 GQ 129 (312)
T ss_pred eE
Confidence 54
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.48 Score=44.22 Aligned_cols=74 Identities=23% Similarity=0.320 Sum_probs=50.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++|.| .|-+|..+++.|.+.|++| .+..+.+... ++.. + .......+.|
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~V---v~Id~d~~~~---~~~~-------------~---------~~~~~~~v~g 51 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNV---VLIDRDEERV---EEFL-------------A---------DELDTHVVIG 51 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCce---EEEEcCHHHH---HHHh-------------h---------hhcceEEEEe
Confidence 5778887 7889999999999999866 5666653221 1100 0 0145788999
Q ss_pred CCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 93 DITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
|-+ +++.++++ +.++|+++-+.+
T Consensus 52 d~t-------~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 52 DAT-------DEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred cCC-------CHHHHHhcCCCcCCEEEEeeC
Confidence 999 56656555 678999995543
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.18 Score=50.23 Aligned_cols=40 Identities=13% Similarity=0.127 Sum_probs=30.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAK 52 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~ 52 (492)
-+|+.|||.||+|-+|+..++-....+ . ..++.+++++..
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~--~-~~v~t~~s~e~~ 195 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAG--A-IKVVTACSKEKL 195 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcC--C-cEEEEEcccchH
Confidence 457899999999999999998776655 2 345666666553
|
|
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.26 Score=47.98 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=31.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.-.+|.| ||||-+|+.+++-|-++...+++++++.-+
T Consensus 2 ~~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~ 38 (322)
T PRK06901 2 ATLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE 38 (322)
T ss_pred CcceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence 3468999 999999999999999988888888887654
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.99 Score=44.27 Aligned_cols=106 Identities=19% Similarity=0.126 Sum_probs=62.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|.|.|| |.+|..++..+...|.. .|++..+.+...... .+ +..+.... ...... +..
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~--ev~L~D~~~~~~~~~-~~-------dl~~~~~~---------~~~~~~-i~~ 61 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELG--DVVLFDIVEGVPQGK-AL-------DIAEAAPV---------EGFDTK-ITG 61 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe--EEEEEECCCchhHHH-HH-------HHHhhhhh---------cCCCcE-EEe
Confidence 69999998 99999999999876642 667877744322111 00 01110000 000111 111
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccC-cchhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTN-FDERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
..+ . ..++++|+||-+++... ......+.+.-|+.-.+.+++...+.
T Consensus 62 ----------~~d-~-~~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~ 109 (307)
T PRK06223 62 ----------TND-Y-EDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY 109 (307)
T ss_pred ----------CCC-H-HHHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 011 2 33589999999998643 23344566778888888888877765
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.44 Score=47.65 Aligned_cols=36 Identities=8% Similarity=0.270 Sum_probs=27.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~ 48 (492)
++|.|.||||++|..+++.|++. ...+.++..+..+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 58999999999999999966654 3445556665554
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.87 E-value=0.98 Score=49.14 Aligned_cols=125 Identities=14% Similarity=0.159 Sum_probs=72.5
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcChh----hHHHHHhcCCc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKDL----FRVLKEKNGTH 78 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~~----f~~l~~~~~~~ 78 (492)
.++-+++.+|+|.| .|-+|+.+++.|.+.|- +++.+..-..-..+-..|.. ..-++.+. -+++++-.|
T Consensus 37 ~Q~kL~~~~VlIvG-~GGlGs~va~~Lar~GV--G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP-- 111 (679)
T PRK14851 37 EQERLAEAKVAIPG-MGGVGGVHLITMVRTGI--GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINP-- 111 (679)
T ss_pred HHHHHhcCeEEEEC-cCHHHHHHHHHHHHhCC--CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCC--
Confidence 35667889999999 77799999999999884 77777655433222222200 00011111 122222223
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
.-+|+.+...++ .++ ...+++++|+||.|.-...+. .-..+.+.|.+. ++ .+|
T Consensus 112 -----~~~I~~~~~~i~-------~~n-~~~~l~~~DvVid~~D~~~~~------------~r~~l~~~c~~~-~i-P~i 164 (679)
T PRK14851 112 -----FLEITPFPAGIN-------ADN-MDAFLDGVDVVLDGLDFFQFE------------IRRTLFNMAREK-GI-PVI 164 (679)
T ss_pred -----CCeEEEEecCCC-------hHH-HHHHHhCCCEEEECCCCCcHH------------HHHHHHHHHHHC-CC-CEE
Confidence 246777777776 333 347778999999776321111 112355677776 44 466
Q ss_pred Eeee
Q 037479 159 HVST 162 (492)
Q Consensus 159 ~vST 162 (492)
+.+.
T Consensus 165 ~~g~ 168 (679)
T PRK14851 165 TAGP 168 (679)
T ss_pred Eeec
Confidence 6553
|
|
| >cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1 | Back alignment and domain information |
|---|
Probab=92.84 E-value=1.5 Score=44.94 Aligned_cols=131 Identities=13% Similarity=0.089 Sum_probs=71.3
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHH---HHHhhcC----hhhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRF---HNEIIGK----DLFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~---~~~~~~~----~~f~~l~~~~~~~~ 79 (492)
++-+.+.+|+|.|++| +|..++..|...| |+++.++.-..-..+-..+- ..+-++. ..-+.|++-.|.
T Consensus 15 Q~~L~~s~VlliG~gg-lGsEilKNLvL~G--Ig~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~-- 89 (425)
T cd01493 15 QAALESAHVCLLNATA-TGTEILKNLVLPG--IGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPD-- 89 (425)
T ss_pred HHHHhhCeEEEEcCcH-HHHHHHHHHHHcC--CCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCC--
Confidence 4556788999999776 9999999999876 57777775443211110000 0000000 112223333321
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
-++.++..++.+- .+.....+.+.|+||-+-. +... ...+.+.|++. + ..||+
T Consensus 90 -----V~i~~~~e~~~~l------l~~~~~f~~~fdiVI~t~~------~~~~--------~~~L~~~c~~~-~-iPlI~ 142 (425)
T cd01493 90 -----VNGSAVEESPEAL------LDNDPSFFSQFTVVIATNL------PEST--------LLRLADVLWSA-N-IPLLY 142 (425)
T ss_pred -----CEEEEEecccchh------hhhHHHHhcCCCEEEECCC------CHHH--------HHHHHHHHHHc-C-CCEEE
Confidence 2345555544310 0111255678899984321 1111 12355777776 4 46999
Q ss_pred eeeceeeccc
Q 037479 160 VSTAFVWGEE 169 (492)
Q Consensus 160 vST~~v~~~~ 169 (492)
++|.+.+|.-
T Consensus 143 ~~s~G~~G~v 152 (425)
T cd01493 143 VRSYGLYGYI 152 (425)
T ss_pred EecccCEEEE
Confidence 9998888853
|
APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.24 Score=42.96 Aligned_cols=37 Identities=24% Similarity=0.375 Sum_probs=30.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.++++|+|+|+ |.+|..+++.|.+.| ..+|++..|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~ 53 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTL 53 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCH
Confidence 45789999997 999999999999875 34667777753
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.31 Score=47.03 Aligned_cols=28 Identities=25% Similarity=0.386 Sum_probs=25.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQP 37 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~ 37 (492)
++||+|+|.|++|.+|+.++..|++.|.
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga 184 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA 184 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999998875
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.21 Score=48.77 Aligned_cols=39 Identities=15% Similarity=0.283 Sum_probs=29.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
.++|.|.||||+.|..|++.|... +++..+....|...+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~H-p~ve~~~~ss~~~~g 40 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGH-PDVELILISSRERAG 40 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcC-CCeEEEEeechhhcC
Confidence 469999999999999999988875 788633333343344
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.37 E-value=1.2 Score=43.99 Aligned_cols=116 Identities=17% Similarity=0.128 Sum_probs=69.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+.++|.|.| +|.+|..++..++..|. ..|+++.+++.... .+.+. +.. .. ........+.
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~~-~~~ld--~~~--------~~------~~~~~~~~I~ 64 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQ-GKALD--ISH--------SN------VIAGSNSKVI 64 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchhh-HHHHH--HHh--------hh------hccCCCeEEE
Confidence 457999999 59999999998887764 34777777655321 12221 100 00 0001112222
Q ss_pred e-cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-ch-----hHHHHHHHhHHHHHHHHHHHHhcccce-eEEEee
Q 037479 91 P-GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DE-----RYDVALDLNTFGAKHVLNFSKKCAKLI-VLVHVS 161 (492)
Q Consensus 91 ~-gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~-----~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~V~vS 161 (492)
. +| . +.++++|+||.+|+..+- .. +..+.+..|+.-.+.+.+...+. ..+ .++.+|
T Consensus 65 ~~~d-------------~-~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~s 128 (321)
T PTZ00082 65 GTNN-------------Y-EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVIT 128 (321)
T ss_pred ECCC-------------H-HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 1 22 2 345899999999986432 12 44667888988888888888776 334 344444
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.30 E-value=1.5 Score=49.14 Aligned_cols=128 Identities=11% Similarity=0.065 Sum_probs=73.7
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~~ 79 (492)
++-+++.+|+|.| .|-+|+.+++.|.+.| |+++.++.-..-..+-..|-. ..=++.. .-.++++-.|
T Consensus 327 Q~kL~~srVlVvG-lGGlGs~ia~~LAraG--VG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP--- 400 (989)
T PRK14852 327 QRRLLRSRVAIAG-LGGVGGIHLMTLARTG--IGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNP--- 400 (989)
T ss_pred HHHHhcCcEEEEC-CcHHHHHHHHHHHHcC--CCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCC---
Confidence 4567889999999 6779999999999987 478877755433332222200 0001111 1222333222
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-+|+.+...++ .+. .+.+++++|+||.|.-.... ...+.+.+.|.+. ++ .+|+
T Consensus 401 ----~v~I~~~~~~I~-------~en-~~~fl~~~DiVVDa~D~~~~------------~~rr~l~~~c~~~-~I-P~I~ 454 (989)
T PRK14852 401 ----FLDIRSFPEGVA-------AET-IDAFLKDVDLLVDGIDFFAL------------DIRRRLFNRALEL-GI-PVIT 454 (989)
T ss_pred ----CCeEEEEecCCC-------HHH-HHHHhhCCCEEEECCCCccH------------HHHHHHHHHHHHc-CC-CEEE
Confidence 145666766665 333 44778999999987632211 1123456667665 43 5777
Q ss_pred eeeceee
Q 037479 160 VSTAFVW 166 (492)
Q Consensus 160 vST~~v~ 166 (492)
.++....
T Consensus 455 ag~~G~~ 461 (989)
T PRK14852 455 AGPLGYS 461 (989)
T ss_pred eeccccC
Confidence 7664433
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.28 E-value=1.6 Score=43.81 Aligned_cols=124 Identities=14% Similarity=0.192 Sum_probs=69.9
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH-----HHhhc-ChhhHHHHHhcCCch
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH-----NEIIG-KDLFRVLKEKNGTHL 79 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~-----~~~~~-~~~f~~l~~~~~~~~ 79 (492)
+++-+++++|+|.| .|-+|+.+++.|.+.| |++|.++.-..-..+-..|.. +++-. ...-+.++++..
T Consensus 170 ~q~kL~~~~VaIVG-~GG~GS~Va~~LAR~G--VgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~--- 243 (393)
T PRK06153 170 LSAKLEGQRIAIIG-LGGTGSYILDLVAKTP--VREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYS--- 243 (393)
T ss_pred HHHHHhhCcEEEEc-CCccHHHHHHHHHHcC--CCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHH---
Confidence 46778899999999 6668999999999987 578888754432222222210 01100 011112222111
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
. ...++..+...++ .+. . ..+.++|+||-|.- |..+-..+.++|.+. ++ .+|.
T Consensus 244 -~-in~~I~~~~~~I~-------~~n-~-~~L~~~DiV~dcvD--------------n~~aR~~ln~~a~~~-gI-P~Id 296 (393)
T PRK06153 244 -N-MRRGIVPHPEYID-------EDN-V-DELDGFTFVFVCVD--------------KGSSRKLIVDYLEAL-GI-PFID 296 (393)
T ss_pred -H-hCCeEEEEeecCC-------HHH-H-HHhcCCCEEEEcCC--------------CHHHHHHHHHHHHHc-CC-CEEE
Confidence 0 1245666665554 322 3 35689999999874 222223355667665 43 4777
Q ss_pred eee
Q 037479 160 VST 162 (492)
Q Consensus 160 vST 162 (492)
++-
T Consensus 297 ~G~ 299 (393)
T PRK06153 297 VGM 299 (393)
T ss_pred eee
Confidence 664
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=91.97 E-value=0.73 Score=44.84 Aligned_cols=26 Identities=12% Similarity=0.308 Sum_probs=23.2
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVK 40 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~ 40 (492)
+|.|.||||+.|..|++.|.+. |++.
T Consensus 3 ~v~IvGasGy~G~el~rlL~~H-P~~e 28 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGR-DDIE 28 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCC-CCeE
Confidence 7999999999999999999886 6764
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=91.89 E-value=1 Score=44.06 Aligned_cols=33 Identities=12% Similarity=0.289 Sum_probs=25.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
+.+|.|.||||++|..|++.|.+. +++ .+..+.
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~h-p~~-~l~~~~ 34 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGR-SDI-ELLSIP 34 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcC-CCe-EEEEEe
Confidence 468999999999999999977775 565 343433
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=91.79 E-value=1.2 Score=36.96 Aligned_cols=30 Identities=20% Similarity=0.513 Sum_probs=23.4
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLL 45 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l 45 (492)
+|.|+|++|.+|+.+++.|.+. +++ .+..+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~-~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDF-EVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCc-eEEEE
Confidence 5789999999999999999874 333 34555
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=91.78 E-value=1.5 Score=35.81 Aligned_cols=70 Identities=20% Similarity=0.331 Sum_probs=44.9
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|+|.|. |-+|..+++.|.+.+ .+|.++.+.+.. .+.+. ...+.++.||.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~---~~vvvid~d~~~---~~~~~------------------------~~~~~~i~gd~ 49 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG---IDVVVIDRDPER---VEELR------------------------EEGVEVIYGDA 49 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT---SEEEEEESSHHH---HHHHH------------------------HTTSEEEES-T
T ss_pred eEEEcC-CHHHHHHHHHHHhCC---CEEEEEECCcHH---HHHHH------------------------hcccccccccc
Confidence 578885 789999999999965 355677665322 11111 25578999999
Q ss_pred CCCCCCCCchhhHH-HhccCccEEEEccc
Q 037479 95 TREDLGVKDSNLRE-EMWNKLDVVINLAA 122 (492)
Q Consensus 95 ~~~~lgl~~~~~~~-~~~~~vd~Vih~Aa 122 (492)
+ +++.++ .-+++++.|+-+..
T Consensus 50 ~-------~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 50 T-------DPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp T-------SHHHHHHTTGGCESEEEEESS
T ss_pred h-------hhhHHhhcCccccCEEEEccC
Confidence 9 444443 34468888886654
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.35 Score=47.47 Aligned_cols=33 Identities=15% Similarity=0.292 Sum_probs=28.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
++|.|+| +|++|..++..|++.|++| .+..|++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V---~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEV---RLWDADP 35 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCee---EEEeCCH
Confidence 5799999 9999999999999999754 7777764
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.88 Score=40.69 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=55.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
..|++|.|.| .|-||+.+++.|..-|. +|++..|..+... ..........-++.+-+ ...+..
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~---~V~~~d~~~~~~~---~~~~~~~~~~~l~ell~----------~aDiv~ 96 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAFGM---RVIGYDRSPKPEE---GADEFGVEYVSLDELLA----------QADIVS 96 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCHHHH---HHHHTTEEESSHHHHHH----------H-SEEE
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecCCc---eeEEecccCChhh---hcccccceeeehhhhcc----------hhhhhh
Confidence 5689999998 79999999999998775 6688888765322 01100111112222211 145666
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLA 121 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~A 121 (492)
+..-++...-++-+.+.+ ..+++=-++||+|
T Consensus 97 ~~~plt~~T~~li~~~~l-~~mk~ga~lvN~a 127 (178)
T PF02826_consen 97 LHLPLTPETRGLINAEFL-AKMKPGAVLVNVA 127 (178)
T ss_dssp E-SSSSTTTTTSBSHHHH-HTSTTTEEEEESS
T ss_pred hhhccccccceeeeeeee-eccccceEEEecc
Confidence 666666666666666655 4444444666665
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.58 Score=45.06 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=26.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++|++|+|+|+++.+|+-++..|++.|..|
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatV 185 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASV 185 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeE
Confidence 679999999999999999999999887544
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=91.09 E-value=3.1 Score=40.64 Aligned_cols=109 Identities=14% Similarity=0.088 Sum_probs=66.6
Q ss_pred EeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCCCC
Q 037479 17 VTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITR 96 (492)
Q Consensus 17 ITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~ 96 (492)
|.| .|.+|..++..|+..+ -+..+.++.+.+..... +.+ ++.....+ ...++.+..+
T Consensus 1 iIG-aG~VG~~~a~~l~~~~-l~~el~L~Di~~~~~~g-~a~--Dl~~~~~~--------------~~~~~~i~~~---- 57 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQG-IADEIVLIDINKDKAEG-EAM--DLQHAASF--------------LPTPKKIRSG---- 57 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcC-CCCEEEEEeCCCChhhH-HHH--HHHHhhcc--------------cCCCeEEecC----
Confidence 356 5999999999998765 34577888775432221 111 12111110 1122333222
Q ss_pred CCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 97 EDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 97 ~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
+ . ..++++|+||-+||..+- ..+-.+.++.|+.-.+.+.+..++. +.+.+|.
T Consensus 58 ------~---~-~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vi 110 (299)
T TIGR01771 58 ------D---Y-SDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKS-GFDGIFL 110 (299)
T ss_pred ------C---H-HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE
Confidence 1 1 455899999999997543 3345678999999999999998886 4444433
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.05 E-value=0.97 Score=45.69 Aligned_cols=33 Identities=18% Similarity=0.384 Sum_probs=27.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
.++|.|.||+|.+|..++..|.+.|++| ++..|
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V---~~~d~ 130 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQV---RILEQ 130 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeE---EEeCC
Confidence 4789999999999999999999999754 55544
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=90.71 E-value=3.1 Score=40.61 Aligned_cols=112 Identities=17% Similarity=0.105 Sum_probs=66.9
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|.|.|+ |.+|..++..|+..| -+..+.++.+.+..... ...++..... .. .......+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~-~~~el~l~D~~~~~~~g---~~~DL~~~~~--------------~~-~~~~i~~~-- 58 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKG-LASELVLVDVNEEKAKG---DALDLSHASA--------------FL-ATGTIVRG-- 58 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHH---HHHhHHHhcc--------------cc-CCCeEEEC--
Confidence 467885 889999999888765 34567787775432211 1111111000 00 11122211
Q ss_pred CCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 95 TREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
. + . ..++++|+||-+|+..+- ..+....+..|+.-.+.+.+..++. +.+.+|.+
T Consensus 59 ~-------~---~-~~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~-~p~~~viv 113 (300)
T cd00300 59 G-------D---Y-ADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILV 113 (300)
T ss_pred C-------C---H-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 1 2 455899999999997542 3345667888999999999998886 44444443
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=90.71 E-value=3.5 Score=36.72 Aligned_cols=89 Identities=24% Similarity=0.236 Sum_probs=51.5
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCchhhhccCc
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~~~~~~~~~ 86 (492)
+|+|.| .|-+|+.+++.|.+.|. +++.+.....-..+-..|-. +++ ... .-.++++-.| .-+
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gv--g~i~lvD~D~v~~sNl~Rq~~~~~~v-g~~Ka~~~~~~l~~lnp-------~v~ 69 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGV--GNLKLVDFDVVEPSNLNRQQYFLSQI-GEPKVEALKENLREINP-------FVK 69 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC--CeEEEEeCCEEcCcchhcccccHhhC-CChHHHHHHHHHHHHCC-------CCE
Confidence 588999 58899999999999874 77888877652222111110 011 111 1122222222 134
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhccCccEEEEcc
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWNKLDVVINLA 121 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~A 121 (492)
++.+...++ .+. .+.+++++|+||.|.
T Consensus 70 i~~~~~~~~-------~~~-~~~~l~~~DlVi~~~ 96 (174)
T cd01487 70 IEAINIKID-------ENN-LEGLFGDCDIVVEAF 96 (174)
T ss_pred EEEEEeecC-------hhh-HHHHhcCCCEEEECC
Confidence 556666655 322 346778999999984
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=90.67 E-value=1.9 Score=46.04 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=31.8
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+-+++.+|||.| .|-||..+++.|++.| |++|.++....
T Consensus 334 ekL~~~kVLIvG-aGGLGs~VA~~La~~G--Vg~ItlVD~D~ 372 (664)
T TIGR01381 334 ERYSQLKVLLLG-AGTLGCNVARCLIGWG--VRHITFVDNGK 372 (664)
T ss_pred HHHhcCeEEEEC-CcHHHHHHHHHHHHcC--CCeEEEEcCCE
Confidence 456789999999 6779999999999876 58888876543
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=90.56 E-value=0.48 Score=46.91 Aligned_cols=38 Identities=24% Similarity=0.235 Sum_probs=31.1
Q ss_pred CchHHHHHHHHHHHHHHh-cCCC-cEEEEeCCceecCCCC
Q 037479 234 PNTYVFTKVMGEMFIEHL-KENM-SVAIVRPTIITGTYKE 271 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-~~~~-~~~ivRPs~v~g~~~~ 271 (492)
..+|-.+|..-|.-+... .+.+ .++|+|||.+.|....
T Consensus 266 ~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 266 MFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred hhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence 357999999999988876 3334 6999999999998875
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.44 E-value=0.9 Score=50.45 Aligned_cols=78 Identities=15% Similarity=0.296 Sum_probs=51.1
Q ss_pred HHHHhccCceeeEEecCCCcccceeehhhhhhHHHHH-HHhhhcCC----CCCCcEEEecCCCCCcccHHHHHHHHHHHh
Q 037479 285 SLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVA-VVAHAKQP----SDVNNIYQVGSSLRNPLIYTNLQDYAYRYF 359 (492)
Q Consensus 285 ~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~-~~~~~~~~----~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~ 359 (492)
.+..+...|.++.+|..-.....++|+|-..++-+.+ ++.-.... +...+.-.|+.+.++.+-|+-+.+.+..|+
T Consensus 235 ~~~~~~a~g~~~~~p~~~~~p~~~~p~d~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vwgm~~~ylm~yy 314 (1108)
T PTZ00374 235 CVCLGVALGTVKHLPVGFRDPATVTPLDVALNTALLAVLLLCHGGLAECVECAAEMQLCGAPGDNSLVWGMVAEYLMDYY 314 (1108)
T ss_pred HHHHHHhhhhhhcccccCCCCceeccHHHHHHHHHHHHHHHhcCChHHHhcchhhheeccCCccceeeHHHHHHHHHHHH
Confidence 3445667788888887777777899999876654332 22211100 000234456666668999999999999999
Q ss_pred hcC
Q 037479 360 TKK 362 (492)
Q Consensus 360 ~~~ 362 (492)
|+-
T Consensus 315 ~r~ 317 (1108)
T PTZ00374 315 GRF 317 (1108)
T ss_pred hhh
Confidence 864
|
|
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=90.43 E-value=3.8 Score=39.59 Aligned_cols=124 Identities=19% Similarity=0.218 Sum_probs=70.9
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHH---H-HHh---hcChhhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRF---H-NEI---IGKDLFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~---~-~~~---~~~~~f~~l~~~~~~~~ 79 (492)
++-+++.+|||.| .|-||..++..|...|. ++|.+..-..-..+-..|- . +.+ ......++|++-.|
T Consensus 14 q~kL~~s~VLIvG-~gGLG~EiaKnLalaGV--g~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp--- 87 (286)
T cd01491 14 MKKLQKSNVLISG-LGGLGVEIAKNLILAGV--KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNP--- 87 (286)
T ss_pred HHHHhcCcEEEEc-CCHHHHHHHHHHHHcCC--CeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCC---
Confidence 4556788999999 55689999999998874 7777765443222111110 0 000 00112334444433
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-++..+.+++. + ..+.+.|+||.+.. ++..... +-++|++. + ..||+
T Consensus 88 ----~V~V~~~~~~~~--------~----~~l~~fdvVV~~~~------~~~~~~~--------in~~c~~~-~-ipfI~ 135 (286)
T cd01491 88 ----YVPVTVSTGPLT--------T----DELLKFQVVVLTDA------SLEDQLK--------INEFCHSP-G-IKFIS 135 (286)
T ss_pred ----CCEEEEEeccCC--------H----HHHhcCCEEEEecC------CHHHHHH--------HHHHHHHc-C-CEEEE
Confidence 134555555432 1 34578999998754 2222222 44678775 4 46999
Q ss_pred eeeceeecc
Q 037479 160 VSTAFVWGE 168 (492)
Q Consensus 160 vST~~v~~~ 168 (492)
..|...+|.
T Consensus 136 a~~~G~~G~ 144 (286)
T cd01491 136 ADTRGLFGS 144 (286)
T ss_pred EeccccEEE
Confidence 888777764
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=90.41 E-value=0.3 Score=45.40 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=28.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
|+|.|+||+|.+|+.++..|.+.|++| .+..|+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V---~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKI---IIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEE---EEEEcCH
Confidence 579999999999999999999998644 6667754
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.37 E-value=2 Score=40.41 Aligned_cols=39 Identities=18% Similarity=0.391 Sum_probs=31.3
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
.++|.|.||+|-+|+.+++.+.+. +++.=+-++.|+++.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~~ 40 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGSL 40 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCcc
Confidence 478999999999999999999875 466556667777553
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=90.31 E-value=17 Score=38.55 Aligned_cols=120 Identities=19% Similarity=0.206 Sum_probs=68.2
Q ss_pred hcCCCEEEEeCCc-chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 9 FLENKTILVTGAT-GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 9 ~~~~~~vlITGat-GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.|.++..+||||+ |-||..++++||..|-. |++..-. -. .+|.. .+..|..++... ...+
T Consensus 393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAt---VI~TTS~-~s---~~r~e-------fyr~LYa~~a~~-----ga~L 453 (866)
T COG4982 393 TYGDKVALVTGASKGSIAAAVVARLLAGGAT---VIATTSR-LS---EERTE-------FYRSLYARHARY-----GAAL 453 (866)
T ss_pred CcccceEEEecCCCcchHHHHHHHHHhCCcE---EEEEccc-cc---HHHHH-------HHHHHHHhhCCC-----CceE
Confidence 4788999999965 89999999999998853 3443221 11 22322 344555554321 2556
Q ss_pred EEEecCCCCCCCCCCchhhHHHh------------------ccCccEEEEcccccCc------chhHHHHHHHhHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEM------------------WNKLDVVINLAATTNF------DERYDVALDLNTFGAKH 143 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~------------------~~~vd~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ 143 (492)
-+|..+..+.. |-+.+-.- .-..|.+|-.||+--. ...-+...++=+...++
T Consensus 454 wvVpaN~~Sys----DVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~R 529 (866)
T COG4982 454 WVVPANMGSYS----DVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLR 529 (866)
T ss_pred EEEeccccchh----hHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHH
Confidence 67777766432 22211111 1136788888886421 12234445555666666
Q ss_pred HHHHHHhc
Q 037479 144 VLNFSKKC 151 (492)
Q Consensus 144 ll~~a~~~ 151 (492)
++-..++.
T Consensus 530 liggl~~~ 537 (866)
T COG4982 530 LIGGLKKQ 537 (866)
T ss_pred HHHHhhhh
Confidence 66655554
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=90.20 E-value=0.56 Score=47.94 Aligned_cols=37 Identities=24% Similarity=0.528 Sum_probs=31.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+.+++|+|.|+ |-+|+.++..|...|. .+|++..|+.
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~ 215 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTI 215 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 57899999996 9999999999998775 6789999974
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=90.16 E-value=3.1 Score=40.76 Aligned_cols=106 Identities=18% Similarity=0.165 Sum_probs=63.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|.|.|+ |.+|..++..|+..|.. .|.++.+.+.-.... .+ +.++.. + . .....++. ..+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~--~VvlvDi~~~l~~g~-a~-------d~~~~~----~--~-~~~~~~i~-~t~ 62 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA--DLVLLDVVEGIPQGK-AL-------DMYEAS----P--V-GGFDTKVT-GTN 62 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC--eEEEEeCCCChhHHH-HH-------hhhhhh----h--c-cCCCcEEE-ecC
Confidence 58999996 99999999999987752 467777643211111 00 111100 0 0 00001111 112
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
| .+. ++++|+||-+|+...- +++-.+.+..|..-.+.+++...+.
T Consensus 63 d-------------~~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 63 N-------------YAD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred C-------------HHH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 223 4789999999997543 3344567888999999998887776
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=90.13 E-value=1.2 Score=43.10 Aligned_cols=38 Identities=21% Similarity=0.221 Sum_probs=30.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.++++++|.|| |..+++++..|...|. ++|++..|+..
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~--~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCcc
Confidence 46789999996 5559999999987664 78999999754
|
|
| >TIGR01408 Ube1 ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
Probab=90.04 E-value=2.9 Score=47.65 Aligned_cols=125 Identities=14% Similarity=0.191 Sum_probs=69.2
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHH---H-HHh---hcChhhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRF---H-NEI---IGKDLFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~---~-~~~---~~~~~f~~l~~~~~~~~ 79 (492)
++-++..+|||.|+ |-||..++..|...| |++|.+..-..-..+-..|- . +.+ ......++|++-.|
T Consensus 19 q~kL~~s~VLIiG~-gGLG~EiaKnL~laG--Vg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp--- 92 (1008)
T TIGR01408 19 MQKMAKSNVLISGM-GGLGLEIAKNLVLAG--VKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNP--- 92 (1008)
T ss_pred HHHHhhCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCC---
Confidence 34567789999996 559999999999887 57777765433211110000 0 000 00012233444332
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-+|+.+.++++ +..+++.|+|+-+-. ++...+ .+-++|++.+....||+
T Consensus 93 ----~V~V~~~~~~l~------------~e~l~~fdvVV~t~~------~~~~~~--------~in~~cr~~~~~I~fI~ 142 (1008)
T TIGR01408 93 ----YVHVSSSSVPFN------------EEFLDKFQCVVLTEM------SLPLQK--------EINDFCHSQCPPIAFIS 142 (1008)
T ss_pred ----CceEEEecccCC------------HHHHcCCCEEEECCC------CHHHHH--------HHHHHHHHcCCCeEEEE
Confidence 134555555443 245689999998632 223323 35578888622235888
Q ss_pred eeeceeec
Q 037479 160 VSTAFVWG 167 (492)
Q Consensus 160 vST~~v~~ 167 (492)
.++.+.+|
T Consensus 143 ~~~~G~~G 150 (1008)
T TIGR01408 143 ADVRGLFG 150 (1008)
T ss_pred EeecceEE
Confidence 87766554
|
This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=89.84 E-value=0.55 Score=48.76 Aligned_cols=75 Identities=21% Similarity=0.288 Sum_probs=49.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
..++|+|.|+ |.+|+.+++.|.+.|++| +++.+++. ..+++. ++ ..++..+
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v---~vid~~~~---~~~~~~-------------~~---------~~~~~~i 280 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSV---KLIERDPE---RAEELA-------------EE---------LPNTLVL 280 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeE---EEEECCHH---HHHHHH-------------HH---------CCCCeEE
Confidence 3588999997 999999999999888644 56655432 122221 11 1356789
Q ss_pred ecCCCCCCCCCCchhhH-HHhccCccEEEEcc
Q 037479 91 PGDITREDLGVKDSNLR-EEMWNKLDVVINLA 121 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~-~~~~~~vd~Vih~A 121 (492)
.||.++ .+.+ +..++++|.||-+.
T Consensus 281 ~gd~~~-------~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 281 HGDGTD-------QELLEEEGIDEADAFIALT 305 (453)
T ss_pred ECCCCC-------HHHHHhcCCccCCEEEECC
Confidence 999984 3333 34456899988544
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=89.74 E-value=1.6 Score=45.43 Aligned_cols=41 Identities=17% Similarity=0.345 Sum_probs=32.1
Q ss_pred cHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 5 SVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 5 ~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
....|+.+++|+|.| .|-.|..+++.|.+.|++| .+..+.+
T Consensus 7 ~~~~~~~~~~i~v~G-~G~sG~a~a~~L~~~G~~V---~~~D~~~ 47 (458)
T PRK01710 7 EFKKFIKNKKVAVVG-IGVSNIPLIKFLVKLGAKV---TAFDKKS 47 (458)
T ss_pred HHhhhhcCCeEEEEc-ccHHHHHHHHHHHHCCCEE---EEECCCC
Confidence 345677889999999 6778999999999999744 6666544
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=89.73 E-value=0.68 Score=40.51 Aligned_cols=30 Identities=27% Similarity=0.423 Sum_probs=24.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|+|.|.++.+|+-|...|++++..|
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atV 63 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATV 63 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-EE
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCCeE
Confidence 579999999999999999999999987533
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=89.62 E-value=2 Score=45.49 Aligned_cols=89 Identities=21% Similarity=0.352 Sum_probs=55.6
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+.++..+|+|.| +|-+|++++..|++.|. .+|++++=..- .+...|+. ++ ..+.++ ..+++
T Consensus 125 ~~qR~akVlVlG-~Gg~~s~lv~sL~~sG~--~~I~~vd~D~v-~SNlnRIg-El------~e~A~~--------~n~~v 185 (637)
T TIGR03693 125 ELSRNAKILAAG-SGDFLTKLVRSLIDSGF--PRFHAIVTDAE-EHALDRIH-EL------AEIAEE--------TDDAL 185 (637)
T ss_pred hhhhcccEEEEe-cCchHHHHHHHHHhcCC--CcEEEEecccc-chhhhHHH-HH------HHHHHH--------hCCCC
Confidence 346788999999 66679999999999886 66767654433 33344433 22 111111 12444
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEccc
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa 122 (492)
.+-..|.+. +.+. ..++++.|+|++.+-
T Consensus 186 ~v~~i~~~~------~~dl-~ev~~~~DiVi~vsD 213 (637)
T TIGR03693 186 LVQEIDFAE------DQHL-HEAFEPADWVLYVSD 213 (637)
T ss_pred ceEeccCCc------chhH-HHhhcCCcEEEEECC
Confidence 444444432 4444 488899999999885
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=89.23 E-value=2.9 Score=40.80 Aligned_cols=104 Identities=20% Similarity=0.177 Sum_probs=60.7
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDI 94 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl 94 (492)
|.|.|| |.+|..++..|...+.. .|++..+++....... + +..+.. ........+ ..
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~g~~-~-------dl~~~~---------~~~~~~~~I-~~-- 57 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQGKA-L-------DISQAA---------PILGSDTKV-TG-- 57 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHHHHH-H-------HHHHhh---------hhcCCCeEE-EE--
Confidence 468997 99999999988876642 6788877643211110 0 111100 000011111 11
Q ss_pred CCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 95 TREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 95 ~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+ .+ . ..++++|+||.+|+...- +....+.+..|+.-.+.+++...+.
T Consensus 58 t--------~d-~-~~l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~ 105 (300)
T cd01339 58 T--------ND-Y-EDIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY 105 (300)
T ss_pred c--------CC-H-HHhCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 11 2 335899999999986532 3334456777888888888887775
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=88.78 E-value=0.38 Score=47.64 Aligned_cols=26 Identities=23% Similarity=0.321 Sum_probs=23.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQP 37 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~ 37 (492)
|.+|||+||||-+|+..++-+...|.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~ 168 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGA 168 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCC
Confidence 78999999999999999998887775
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=88.77 E-value=0.6 Score=45.89 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=31.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.+.+|+|+||+|.+|..+++.+...|. +|++++|+.
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~---~v~~~~~~~ 197 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKALGA---RVIAVTRSP 197 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---eEEEEeCCH
Confidence 3578999999999999999999998885 457777654
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.77 E-value=1.6 Score=42.99 Aligned_cols=93 Identities=17% Similarity=0.205 Sum_probs=59.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe-cCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR-AADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR-~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+.||+|.|.| .|-||+.+++.|..-|- +|++..+ .+....... .....+-++.+-+ ...+.
T Consensus 140 l~gkTvGIiG-~G~IG~~va~~l~afgm---~v~~~d~~~~~~~~~~~----~~~~~~~Ld~lL~----------~sDiv 201 (324)
T COG0111 140 LAGKTVGIIG-LGRIGRAVAKRLKAFGM---KVIGYDPYSPRERAGVD----GVVGVDSLDELLA----------EADIL 201 (324)
T ss_pred ccCCEEEEEC-CCHHHHHHHHHHHhCCC---eEEEECCCCchhhhccc----cceecccHHHHHh----------hCCEE
Confidence 4589999999 99999999999987775 4577766 222111100 0111111222222 25677
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-CccEEEEccc
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-KLDVVINLAA 122 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-~vd~Vih~Aa 122 (492)
.+..=++...-|+-+.+.+ ..++ ++ ++||+|=
T Consensus 202 ~lh~PlT~eT~g~i~~~~~-a~MK~ga-ilIN~aR 234 (324)
T COG0111 202 TLHLPLTPETRGLINAEEL-AKMKPGA-ILINAAR 234 (324)
T ss_pred EEcCCCCcchhcccCHHHH-hhCCCCe-EEEECCC
Confidence 7777888888888887776 4454 55 9999873
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=88.64 E-value=3.6 Score=39.86 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=25.7
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
+|||.| .|-||..+++.|.+.| |++|.++...
T Consensus 1 kVLIvG-aGGLGs~vA~~La~aG--Vg~ItlvD~D 32 (307)
T cd01486 1 KCLLLG-AGTLGCNVARNLLGWG--VRHITFVDSG 32 (307)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCC
Confidence 588998 6679999999999876 5788776544
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=88.51 E-value=3.9 Score=38.02 Aligned_cols=125 Identities=22% Similarity=0.278 Sum_probs=67.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHh---hcChhhHHHHHhcCCchhhhcc--
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEI---IGKDLFRVLKEKNGTHLNALIS-- 84 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~---~~~~~f~~l~~~~~~~~~~~~~-- 84 (492)
+++.+|.|.| -|.+|++.+|.|.|+|- .+|.+..-..-..+-..|---.+ ...+.-+.++++.. .+.
T Consensus 28 l~~~~V~VvG-iGGVGSw~veALaRsGi--g~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~-----~InP~ 99 (263)
T COG1179 28 LKQAHVCVVG-IGGVGSWAVEALARSGI--GRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIK-----QINPE 99 (263)
T ss_pred HhhCcEEEEe-cCchhHHHHHHHHHcCC--CeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHH-----hhCCC
Confidence 5678999999 56699999999999884 67776644332222222211011 11222222222210 011
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhc-cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMW-NKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA 163 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~-~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~ 163 (492)
.+|..+..=++ .+. .+.++ .+.|+||.+.-. +..-..|+..|.+. ++ -.+||.
T Consensus 100 c~V~~~~~f~t-------~en-~~~~~~~~~DyvIDaiD~--------------v~~Kv~Li~~c~~~-ki---~vIss~ 153 (263)
T COG1179 100 CEVTAINDFIT-------EEN-LEDLLSKGFDYVIDAIDS--------------VRAKVALIAYCRRN-KI---PVISSM 153 (263)
T ss_pred ceEeehHhhhC-------HhH-HHHHhcCCCCEEEEchhh--------------hHHHHHHHHHHHHc-CC---CEEeec
Confidence 23333333333 223 33444 479999987532 33445588889986 33 466776
Q ss_pred eeecc
Q 037479 164 FVWGE 168 (492)
Q Consensus 164 ~v~~~ 168 (492)
++-+.
T Consensus 154 Gag~k 158 (263)
T COG1179 154 GAGGK 158 (263)
T ss_pred cccCC
Confidence 66554
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=87.84 E-value=2.5 Score=38.63 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=28.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
++|++|+|.|| |-+|...++.|++.|.+ |.++.+
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~---V~VIs~ 41 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGAH---IVVISP 41 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCe---EEEEcC
Confidence 57899999996 99999999999999854 455544
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=87.58 E-value=1 Score=43.68 Aligned_cols=30 Identities=23% Similarity=0.370 Sum_probs=27.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|.|.|.+|.+|+-++..|+++|..|
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatV 186 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSV 186 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEE
Confidence 479999999999999999999999998654
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=87.57 E-value=1.1 Score=47.23 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=31.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+.+++|+|.|+ |-+|..++..|+..|. .+|++..|+.
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~--~~V~V~nRs~ 300 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGC--TKMVVVNRSE 300 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCC--CeEEEEeCCH
Confidence 55799999997 9999999999998774 5788888874
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=87.33 E-value=0.88 Score=44.14 Aligned_cols=36 Identities=11% Similarity=0.287 Sum_probs=30.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+.+++|+|+|+ |.+|+.++..|...|. +|++..|+.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~---~V~v~~R~~ 184 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGA---RVFVGARSS 184 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 46899999996 8899999999998885 568888864
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=87.20 E-value=1 Score=43.25 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=29.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
++++++|+|+ |.+|+.++..|++.|. +|++..|+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~---~v~v~~R~~ 150 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADC---NVIIANRTV 150 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4789999997 8999999999998874 567777753
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=87.08 E-value=0.87 Score=45.40 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=25.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
++|.|+||||++|++|++.|.+. +.+ .|..+.++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~-~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYF-ELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEEEC
Confidence 47999999999999999988765 444 44555443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >KOG1496 consensus Malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=86.69 E-value=5 Score=37.15 Aligned_cols=22 Identities=36% Similarity=0.502 Sum_probs=20.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHh
Q 037479 13 KTILVTGATGFLAKIFVEKILR 34 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~ 34 (492)
-+|+||||.|.||.+|+-.+.+
T Consensus 5 irVlVtGAAGqI~ysll~~ia~ 26 (332)
T KOG1496|consen 5 IRVLVTGAAGQIGYSLLPMIAR 26 (332)
T ss_pred eEEEeecccchhhHHHHHHHcC
Confidence 4899999999999999999876
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=86.54 E-value=1.1 Score=43.64 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=29.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
..+++|+|.|+ |-+|+.++..|.+.|. +|++..|+.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga---~V~v~~r~~ 185 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGA---NVTVGARKS 185 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 35899999995 8899999999998884 567777763
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=86.38 E-value=1.7 Score=37.15 Aligned_cols=30 Identities=27% Similarity=0.411 Sum_probs=26.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|.|.|.++-+|+.|+..|.++|..|
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~gatV 55 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRDGATV 55 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 579999999999999999999999887543
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=86.32 E-value=1.7 Score=44.11 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=30.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
++|+|||||+....|-.+++.|-+.|++ |+++...+
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~---Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHT---VILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCc
Confidence 4689999999999999999999999964 47766554
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=86.22 E-value=1.4 Score=42.39 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=26.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++|++|.|.|.++.+|+-|+..|++.|..|
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~atV 185 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATV 185 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEE
Confidence 479999999999999999999999887543
|
|
| >PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] | Back alignment and domain information |
|---|
Probab=86.08 E-value=1.5 Score=45.40 Aligned_cols=114 Identities=18% Similarity=0.220 Sum_probs=62.6
Q ss_pred CCEEEEeC-CcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 12 NKTILVTG-ATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 12 ~~~vlITG-atGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++.|++.| |+|-|....+....+.+.. .+||++-.+.......++. ++. +...++|+++
T Consensus 187 ~~vVldVGAGrGpL~~~al~A~~~~~~a-~~VyAVEkn~~A~~~l~~~------------v~~-------n~w~~~V~vi 246 (448)
T PF05185_consen 187 DKVVLDVGAGRGPLSMFALQAGARAGGA-VKVYAVEKNPNAVVTLQKR------------VNA-------NGWGDKVTVI 246 (448)
T ss_dssp T-EEEEES-TTSHHHHHHHHTTHHHCCE-SEEEEEESSTHHHHHHHHH------------HHH-------TTTTTTEEEE
T ss_pred ceEEEEeCCCccHHHHHHHHHHHHhCCC-eEEEEEcCCHhHHHHHHHH------------HHh-------cCCCCeEEEE
Confidence 57899999 7888887777776666643 4888876543221111111 000 1134789999
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEE-cccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVIN-LAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih-~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
.||+.+ - .+.+++|+||. +-|....+|-..+ ++.++.+.-+...++.-+++.+|-
T Consensus 247 ~~d~r~-------v----~lpekvDIIVSElLGsfg~nEl~pE-----------~Lda~~rfLkp~Gi~IP~~~t~yl 302 (448)
T PF05185_consen 247 HGDMRE-------V----ELPEKVDIIVSELLGSFGDNELSPE-----------CLDAADRFLKPDGIMIPSSYTSYL 302 (448)
T ss_dssp ES-TTT-------S----CHSS-EEEEEE---BTTBTTTSHHH-----------HHHHGGGGEEEEEEEESSEEEEEE
T ss_pred eCcccC-------C----CCCCceeEEEEeccCCccccccCHH-----------HHHHHHhhcCCCCEEeCcchhhEE
Confidence 999984 2 33358999996 3343333332221 345555432334567766665553
|
These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B .... |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=86.05 E-value=1.4 Score=42.73 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=31.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.++++++|.|+ |-.|+.++..|.+.|. ++|+++.|+.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~--~~i~I~nRt~ 159 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGV--TDITVINRNP 159 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCC--CeEEEEeCCH
Confidence 46789999984 8889999999998774 6889999974
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=85.95 E-value=1.5 Score=43.39 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=29.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.|.+|+|+||+|-+|..+++.+...|. +|++.+++.
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~---~Vi~~~~~~ 186 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGC---YVVGSAGSD 186 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 3578999999999999999887777774 467777754
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=85.74 E-value=2.4 Score=40.75 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=26.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
+.||+|+|.|.+..+|+-|+..|++.+..|
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~atV 186 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAGCTV 186 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCCeE
Confidence 469999999999999999999999887544
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=85.67 E-value=1.3 Score=43.58 Aligned_cols=37 Identities=16% Similarity=0.112 Sum_probs=29.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.|.+|||+||+|-+|..+++.+...|. +|++.+++.
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~---~vi~~~~s~ 178 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGC---KVIGCAGSD 178 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 3578999999999999998887777774 567777654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=85.46 E-value=1.9 Score=42.72 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=28.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.+|||+||+|-+|..+++.+...|. .+|++.+++.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~--~~Vi~~~~s~ 190 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGC--SRVVGICGSD 190 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence 7999999999999999887766664 3568877754
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=85.46 E-value=1.5 Score=42.27 Aligned_cols=30 Identities=27% Similarity=0.418 Sum_probs=27.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|.|.|.||.+|+-++..|+++|..|
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gatV 185 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNATV 185 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCCEE
Confidence 479999999999999999999999998655
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=85.29 E-value=2.5 Score=40.95 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=30.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.++++|+|.|+ |..|+.++..|.+.| +++|+++.|..
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G--~~~I~I~nR~~ 161 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLG--VERLTIFDVDP 161 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcC--CCEEEEECCCH
Confidence 35789999995 669999999999877 46889998864
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=85.26 E-value=1.6 Score=42.29 Aligned_cols=30 Identities=20% Similarity=0.358 Sum_probs=27.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|.|.|.+|.+|+.++..|++.|+.|
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tV 185 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANATV 185 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCCEE
Confidence 479999999999999999999999988655
|
|
| >KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=84.96 E-value=7.6 Score=37.42 Aligned_cols=126 Identities=17% Similarity=0.145 Sum_probs=66.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHh---hcChhhHHHHHhcCCchhhhccCc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEI---IGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~---~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
.++.-|.|.| .|-+|++++..|+|+|. .+|.++.=..-..+...|.--.. .+.+.-..|++-. .+
T Consensus 72 l~~syVVVVG-~GgVGSwv~nmL~RSG~--qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~---------sk 139 (430)
T KOG2018|consen 72 LTNSYVVVVG-AGGVGSWVANMLLRSGV--QKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHF---------SK 139 (430)
T ss_pred hcCcEEEEEe-cCchhHHHHHHHHHhcC--ceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHH---------Hh
Confidence 4567788888 56699999999999985 56666544333333232221111 1122222333221 11
Q ss_pred eE-EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 87 IT-LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 87 v~-~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
+. +.+.|....-.-.+.++ +-+..++|.|+.|.- |+..-..|+++|-.. +++ .+||.++
T Consensus 140 iaPw~eIdar~~l~~~~s~e--dll~gnPdFvvDciD--------------NidtKVdLL~y~~~~-~l~---Viss~Ga 199 (430)
T KOG2018|consen 140 IAPWCEIDARNMLWTSSSEE--DLLSGNPDFVVDCID--------------NIDTKVDLLEYCYNH-GLK---VISSTGA 199 (430)
T ss_pred hCccceecHHHhhcCCCchh--hhhcCCCCeEeEhhh--------------hhhhhhHHHHHHHHc-CCc---eEeccCc
Confidence 11 12233222212111222 245568999999863 344555689999886 665 3455555
Q ss_pred ec
Q 037479 166 WG 167 (492)
Q Consensus 166 ~~ 167 (492)
.+
T Consensus 200 aa 201 (430)
T KOG2018|consen 200 AA 201 (430)
T ss_pred cc
Confidence 44
|
|
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.76 E-value=5.4 Score=36.69 Aligned_cols=37 Identities=14% Similarity=0.235 Sum_probs=26.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
++|.|.| +|.||+.+++.+.+.--.+..+++..|+..
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~e 37 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEE 37 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHH
Confidence 4688888 899999999977653234556666666544
|
|
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=84.70 E-value=2.2 Score=40.16 Aligned_cols=37 Identities=19% Similarity=0.399 Sum_probs=29.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhC-CCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQ-PNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g-~~V~~i~~lvR~ 48 (492)
++++|.|.| +|.+|+.++..|++.+ ..+..|++..|+
T Consensus 3 ~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~ 40 (245)
T PRK07634 3 KKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRS 40 (245)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCC
Confidence 468999999 7999999999999876 345556666664
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=84.64 E-value=9.4 Score=36.10 Aligned_cols=92 Identities=13% Similarity=0.113 Sum_probs=59.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|||.|||+= |+.|++.|.+.|..| ++.+-...+.. ....+..+.
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v---~~Svat~~g~~-----------------------------~~~~~~v~~ 48 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAAGVDI---VLSLAGRTGGP-----------------------------ADLPGPVRV 48 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhCCCeE---EEEEccCCCCc-----------------------------ccCCceEEE
Confidence 468999999996 999999999888643 44444332210 014566777
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhccccee
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIV 156 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~ 156 (492)
|-+. +.+.+...++ +++.||+..- ++. ..-++++.++|++. ++.-
T Consensus 49 G~l~-------~~~~l~~~l~~~~i~~VIDATH------PfA------~~is~~a~~ac~~~-~ipy 95 (248)
T PRK08057 49 GGFG-------GAEGLAAYLREEGIDLVIDATH------PYA------AQISANAAAACRAL-GIPY 95 (248)
T ss_pred CCCC-------CHHHHHHHHHHCCCCEEEECCC------ccH------HHHHHHHHHHHHHh-CCcE
Confidence 8774 3333445554 7999998753 222 23456788899998 6653
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=84.54 E-value=4.2 Score=38.91 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=24.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
++|.|.| +|.+|+.+++.|.+.+.++.-+.+..|+
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~ 36 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRN 36 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCC
Confidence 5899999 6999999999998764344333344443
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=84.24 E-value=6.3 Score=37.29 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=57.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||.|||+= |+.|++.|.+.|. | .+-+-..-+.. +.. .....+.++.|
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v---~~sv~t~~g~~--------~~~-----------------~~~~~~~v~~G 50 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-V---IVSVATSYGGE--------LLK-----------------PELPGLEVRVG 50 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-E---EEEEEhhhhHh--------hhc-----------------cccCCceEEEC
Confidence 79999999986 9999999999885 3 22222211110 000 00145677888
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccce
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLI 155 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~ 155 (492)
-+. +.+.+...++ +++.||+..- ++. ..-++++.++|++. ++.
T Consensus 51 ~lg-------~~~~l~~~l~~~~i~~vIDATH------PfA------~~is~na~~a~~~~-~ip 95 (249)
T PF02571_consen 51 RLG-------DEEGLAEFLRENGIDAVIDATH------PFA------AEISQNAIEACREL-GIP 95 (249)
T ss_pred CCC-------CHHHHHHHHHhCCCcEEEECCC------chH------HHHHHHHHHHHhhc-Ccc
Confidence 774 3333445554 8999998753 222 23457788899988 665
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=84.22 E-value=2 Score=42.28 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=29.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|.+|||+||+|-+|..+++.+...|. +|++.+++.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~---~Vi~~~~s~ 173 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGC---KVVGAAGSD 173 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 578999999999999998887776674 567777754
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=83.96 E-value=2.4 Score=41.13 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=31.3
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.-++++|+|+||+|-+|..+++.+...|. +|+++.+++
T Consensus 142 ~~~g~~vlI~g~~~~~g~~~~~~a~~~g~---~v~~~~~~~ 179 (325)
T cd08253 142 AKAGETVLVHGGSGAVGHAAVQLARWAGA---RVIATASSA 179 (325)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 34689999999999999999998888774 568887754
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=83.92 E-value=1.8 Score=42.49 Aligned_cols=36 Identities=22% Similarity=0.175 Sum_probs=29.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+.+++|.|.| .|-||+.+++.|..-|. +|++..|..
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG~---~V~~~~~~~ 169 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWGF---PLRCWSRSR 169 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCC---EEEEEeCCC
Confidence 5689999999 99999999999998775 446666643
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=83.75 E-value=1.8 Score=41.82 Aligned_cols=99 Identities=16% Similarity=0.182 Sum_probs=60.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC-cCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA-KSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~-~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.|+.|-|+|+.| ||+--+..-..-|. +|++.+++.+. ....++|- ....
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~---rV~vis~~~~kkeea~~~LG-------------------------Ad~f- 230 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGM---RVTVISTSSKKKEEAIKSLG-------------------------ADVF- 230 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCc---EEEEEeCCchhHHHHHHhcC-------------------------ccee-
Confidence 589999999999 99887777777785 56888887533 22222211 1111
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
.|.++ +++..+.+.+-.|.++|++... ...+++ .+++++|.. -++|.++-
T Consensus 231 --v~~~~------d~d~~~~~~~~~dg~~~~v~~~-a~~~~~-----------~~~~~lk~~---Gt~V~vg~ 280 (360)
T KOG0023|consen 231 --VDSTE------DPDIMKAIMKTTDGGIDTVSNL-AEHALE-----------PLLGLLKVN---GTLVLVGL 280 (360)
T ss_pred --EEecC------CHHHHHHHHHhhcCcceeeeec-cccchH-----------HHHHHhhcC---CEEEEEeC
Confidence 23332 5667767777788888887643 111221 245566654 26788874
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=83.69 E-value=2.1 Score=41.17 Aligned_cols=30 Identities=20% Similarity=0.427 Sum_probs=26.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|+|.|.+..+|+-++..|+++|..|
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtV 184 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNAGASV 184 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCEE
Confidence 469999999999999999999999888544
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=83.60 E-value=2.1 Score=41.26 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=26.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
+.|++|+|.|.+..+|+-|+..|++++..|
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~~~~atV 191 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLLNRNATV 191 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCCEE
Confidence 479999999999999999999999887544
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=83.57 E-value=1.9 Score=41.68 Aligned_cols=37 Identities=14% Similarity=0.124 Sum_probs=31.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.++++++|.|| |..|++++..|.+.|. ++|++..|..
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~--~~i~i~nR~~ 161 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT 161 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCC--CEEEEEcCCH
Confidence 45789999995 8899999999998775 6889998864
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=83.07 E-value=2.2 Score=43.89 Aligned_cols=37 Identities=24% Similarity=0.405 Sum_probs=30.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+.+++|+|.|+ |-+|..++..|...|. .+|++..|+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~--~~V~v~~r~~ 216 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV--RKITVANRTL 216 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC--CeEEEEeCCH
Confidence 57899999985 9999999999987764 5678888864
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=82.96 E-value=8.5 Score=36.82 Aligned_cols=34 Identities=12% Similarity=0.311 Sum_probs=24.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
++|.|.|+ |.+|+.+++.|.+. +++.-+.+.+|.
T Consensus 2 ~rVgIiG~-G~iG~~~~~~l~~~-~~~~l~~v~~~~ 35 (265)
T PRK13303 2 MKVAMIGF-GAIGAAVLELLEHD-PDLRVDWVIVPE 35 (265)
T ss_pred cEEEEECC-CHHHHHHHHHHhhC-CCceEEEEEEcC
Confidence 58999997 99999999988764 444333333343
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=82.90 E-value=0.89 Score=35.77 Aligned_cols=35 Identities=11% Similarity=0.220 Sum_probs=25.8
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE-EecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLL-LRAA 49 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l-vR~~ 49 (492)
+|.|. |+|-+|+.|+..|++.|..-.+|+.. .|+.
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~ 36 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSP 36 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSH
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcH
Confidence 46677 59999999999999998433466744 5653
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=82.86 E-value=2.2 Score=41.96 Aligned_cols=37 Identities=24% Similarity=0.384 Sum_probs=30.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
..+++|+|.|+ |-+|..++..|...| +.+|++..|+.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g--~~~V~v~~r~~ 212 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKG--VAEITIANRTY 212 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcC--CCEEEEEeCCH
Confidence 46899999996 999999999988754 35778888864
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=82.62 E-value=1.7 Score=34.89 Aligned_cols=35 Identities=26% Similarity=0.352 Sum_probs=28.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
++|++|+|.|| |-+|..-++.|++.|. +|+++...
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA---~v~vis~~ 39 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEAGA---KVTVISPE 39 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCCTB---EEEEEESS
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEECCc
Confidence 47899999996 9999999999999984 55676654
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=82.50 E-value=8.5 Score=40.32 Aligned_cols=35 Identities=11% Similarity=0.219 Sum_probs=28.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
+.+++|+|.|+ |.+|..+++.|.+.|.+ |.+..+.
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~---V~~~d~~ 48 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGAR---VTVVDDG 48 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 56889999995 88999999999998864 4666544
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=82.50 E-value=11 Score=35.97 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=26.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
++|.|.|++|-+|+.+++.+.+. +++.-+.+..|+
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~-~~~elvav~d~~ 36 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAA-EGLQLVAAFERH 36 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence 58999999999999999999864 555334444444
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=82.35 E-value=1.1 Score=40.73 Aligned_cols=27 Identities=15% Similarity=0.223 Sum_probs=25.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++|.|.||+|-+|+.++..|.+.|+.|
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v 27 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGV 27 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEE
Confidence 589999999999999999999999865
|
|
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.34 E-value=1.6 Score=43.25 Aligned_cols=76 Identities=21% Similarity=0.315 Sum_probs=54.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++||+.| +||+..-+++.|.+++ +| +|.+..|..++. +++-+ ..+++.|.
T Consensus 2 ~~~vlllg-sg~v~~p~~d~ls~~~-dv-~vtva~~~~~~~---~~~~~-----------------------~~~~~av~ 52 (445)
T KOG0172|consen 2 KKGVLLLG-SGFVSRPVADFLSRKK-DV-NVTVASRTLKDA---EALVK-----------------------GINIKAVS 52 (445)
T ss_pred CcceEEec-CccccchHHHHHhhcC-Cc-eEEEehhhHHHH---HHHhc-----------------------CCCccceE
Confidence 57899999 8999999999999875 55 666666655432 22210 24478899
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEccc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa 122 (492)
.|+.+ ++..+....++.|.|+-+--
T Consensus 53 ldv~~------~~~~L~~~v~~~D~viSLlP 77 (445)
T KOG0172|consen 53 LDVAD------EELALRKEVKPLDLVISLLP 77 (445)
T ss_pred EEccc------hHHHHHhhhcccceeeeecc
Confidence 99994 22256678889999997754
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=82.22 E-value=3.8 Score=39.50 Aligned_cols=30 Identities=27% Similarity=0.471 Sum_probs=26.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|.|.|.|..+|+-|...|++++..|
T Consensus 153 l~Gk~vvViGrS~iVGkPla~lL~~~~aTV 182 (287)
T PRK14173 153 LAGKEVVVVGRSNIVGKPLAALLLREDATV 182 (287)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEE
Confidence 479999999999999999999999887533
|
|
| >cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2 | Back alignment and domain information |
|---|
Probab=82.14 E-value=11 Score=38.81 Aligned_cols=128 Identities=19% Similarity=0.165 Sum_probs=69.6
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCC---CeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCchhhhc
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNV---KKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTHLNALI 83 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V---~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~~~~~~ 83 (492)
+|||.| .|-+|..++..|...|... ++|.++....-..+-..|-. .+-.+.+ .-+.+++-.|
T Consensus 1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp------- 72 (435)
T cd01490 1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNP------- 72 (435)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCC-------
Confidence 589999 6779999999999877411 67777765443332222210 0000111 1223333333
Q ss_pred cCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec
Q 037479 84 SEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA 163 (492)
Q Consensus 84 ~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~ 163 (492)
.-+++.+...+.... ....-...+++.|+|+.+.-. +..-..+-+.|... + +.+|..+|.
T Consensus 73 ~v~I~a~~~~v~~~~----~~~~~~~f~~~~DvVi~alDn--------------~~aR~~vn~~C~~~-~-iPli~~gt~ 132 (435)
T cd01490 73 DLKITALQNRVGPET----EHIFNDEFWEKLDGVANALDN--------------VDARMYVDRRCVYY-R-KPLLESGTL 132 (435)
T ss_pred CCEEEEEecccChhh----hhhhhHHHhcCCCEEEECCCC--------------HHHHHHHHHHHHHh-C-CCEEEEecc
Confidence 145666666665211 000112456789999987532 22233456677775 3 468888887
Q ss_pred eeeccc
Q 037479 164 FVWGEE 169 (492)
Q Consensus 164 ~v~~~~ 169 (492)
+..|..
T Consensus 133 G~~G~v 138 (435)
T cd01490 133 GTKGNT 138 (435)
T ss_pred cceeEE
Confidence 776653
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=82.11 E-value=3 Score=42.04 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=27.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.+.+|+|.|+ |-+|...++.|.+.|. +|.+..|+
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa---~V~v~d~~ 199 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGA---TVTILDIN 199 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCC---eEEEEECC
Confidence 4567999986 8999999999998885 46777765
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=82.06 E-value=7.4 Score=35.14 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=27.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|+|.|-+..+|+-|+..|++++..|
T Consensus 60 l~GK~vvVIGrS~iVGkPla~lL~~~~AtV 89 (197)
T cd01079 60 LYGKTITIINRSEVVGRPLAALLANDGARV 89 (197)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEE
Confidence 689999999999999999999999988544
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=81.92 E-value=9.9 Score=39.45 Aligned_cols=39 Identities=18% Similarity=0.321 Sum_probs=31.5
Q ss_pred HhhcCCCEEEEeCCc---chhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 7 LEFLENKTILVTGAT---GFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 7 ~~~~~~~~vlITGat---GflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
..+++.++|.|.|+| |-+|..+++.|++.|+. .+||.+.
T Consensus 2 ~~l~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~-g~v~~Vn 43 (447)
T TIGR02717 2 EHLFNPKSVAVIGASRDPGKVGYAIMKNLIEGGYK-GKIYPVN 43 (447)
T ss_pred ccccCCCEEEEEccCCCCCchHHHHHHHHHhCCCC-CcEEEEC
Confidence 357889999999998 67899999999998874 3566544
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=81.86 E-value=8.3 Score=37.87 Aligned_cols=35 Identities=14% Similarity=0.156 Sum_probs=28.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
+.||+|.|.| .|-||+.+++.+..-|- +|.+..|.
T Consensus 143 L~gktvGIiG-~G~IG~~vA~~~~~fgm---~V~~~d~~ 177 (311)
T PRK08410 143 IKGKKWGIIG-LGTIGKRVAKIAQAFGA---KVVYYSTS 177 (311)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHhhcCC---EEEEECCC
Confidence 6799999999 89999999998875443 56776664
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=81.78 E-value=2.6 Score=43.27 Aligned_cols=37 Identities=30% Similarity=0.479 Sum_probs=31.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+.+++|+|.|+ |-+|..++..|...| +.+|++..|+.
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G--~~~V~v~~rs~ 214 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKG--VGKILIANRTY 214 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCC--CCEEEEEeCCH
Confidence 56899999996 999999999998866 35778888864
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.73 E-value=2.7 Score=40.35 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=26.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
+.||+|.|.|.|..+|+-|...|++++..|
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~~atV 186 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEMNATV 186 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCEE
Confidence 479999999999999999999999877533
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.54 E-value=2.8 Score=40.31 Aligned_cols=30 Identities=23% Similarity=0.338 Sum_probs=26.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|+|.|.|..+|+-|+..|++++..|
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~ATV 185 (282)
T PRK14180 156 TEGAYAVVVGASNVVGKPVSQLLLNAKATV 185 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCEE
Confidence 569999999999999999999999887543
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=81.53 E-value=7.7 Score=37.26 Aligned_cols=25 Identities=16% Similarity=0.260 Sum_probs=21.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhh
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRV 35 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~ 35 (492)
|+.++|.|.| +|.+|+.+++.|.+.
T Consensus 4 m~~irIGIIG-~G~IG~~~a~~L~~~ 28 (271)
T PRK13302 4 RPELRVAIAG-LGAIGKAIAQALDRG 28 (271)
T ss_pred CCeeEEEEEC-ccHHHHHHHHHHHhc
Confidence 4568999999 799999999999863
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.16 E-value=3 Score=39.99 Aligned_cols=30 Identities=23% Similarity=0.438 Sum_probs=26.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|.|.|.|..+|+-|...|++++..|
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~AtV 185 (278)
T PRK14172 156 IEGKEVVVIGRSNIVGKPVAQLLLNENATV 185 (278)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEE
Confidence 479999999999999999999999877433
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=80.95 E-value=2.8 Score=39.50 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=29.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.+.+|+|+|++| +|..+++.+...| .+|+++.++.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g---~~v~~~~~~~ 168 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAG---ARVIVTDRSD 168 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcC---CeEEEEcCCH
Confidence 3578999999999 9999998887777 3567777754
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
Probab=80.71 E-value=13 Score=36.04 Aligned_cols=89 Identities=17% Similarity=0.223 Sum_probs=52.0
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH----HHh---hcChhhHHHHHhcCCchhhhccCc
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH----NEI---IGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~----~~~---~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
+|||.| .|-+|..+++.|...| |++|.++.-..-..+-..|-. +.+ .....-+.+++..| .-+
T Consensus 1 kVlVVG-aGGlG~eilknLal~G--vg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np-------~v~ 70 (291)
T cd01488 1 KILVIG-AGGLGCELLKNLALSG--FRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVP-------GVN 70 (291)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCC-------CCE
Confidence 589998 6779999999999877 478888755432222222210 000 00011223333333 146
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhccCccEEEEcc
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWNKLDVVINLA 121 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~A 121 (492)
++.+.+++.+ .+ ...+++.|+||.+.
T Consensus 71 I~~~~~~i~~-------~~--~~f~~~fdvVi~al 96 (291)
T cd01488 71 VTPHFGKIQD-------KD--EEFYRQFNIIICGL 96 (291)
T ss_pred EEEEecccCc-------hh--HHHhcCCCEEEECC
Confidence 7777788773 22 25668999999865
|
UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=80.51 E-value=13 Score=38.50 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=27.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
+.+++|+|+|+ |-.|..+++.|.+.|..| .+..+.
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v---~~~d~~ 37 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEV---AAYDAE 37 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEE---EEEeCC
Confidence 46889999997 469999999999999644 555443
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=80.44 E-value=3.3 Score=40.08 Aligned_cols=30 Identities=20% Similarity=0.311 Sum_probs=26.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|.|.|.|..+|+-|...|++++..|
T Consensus 156 l~Gk~vvVIGrS~iVGkPla~lL~~~~atV 185 (297)
T PRK14186 156 IAGKKAVVVGRSILVGKPLALMLLAANATV 185 (297)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEE
Confidence 479999999999999999999999887543
|
|
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=80.37 E-value=3.9 Score=31.54 Aligned_cols=35 Identities=34% Similarity=0.366 Sum_probs=29.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
+++++++|.|+ |.+|+.++..|.+.+. .+|++..|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~--~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADEGG--KKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcC
Confidence 56799999997 9999999999999753 56777766
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=80.36 E-value=12 Score=34.25 Aligned_cols=29 Identities=28% Similarity=0.410 Sum_probs=25.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++|++|+|.| .|-+|..-+..|++.|.+|
T Consensus 7 l~gk~vlVvG-gG~va~rk~~~Ll~~ga~V 35 (205)
T TIGR01470 7 LEGRAVLVVG-GGDVALRKARLLLKAGAQL 35 (205)
T ss_pred cCCCeEEEEC-cCHHHHHHHHHHHHCCCEE
Confidence 5789999999 7889999999999999644
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=80.30 E-value=4.8 Score=40.66 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=28.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
+++|+|.|| |.+|+.++....+.|++ |+++...+.
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~---v~~~d~~~~ 36 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYK---VIVLDPDPD 36 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCE---EEEEeCCCC
Confidence 478999996 89999999999998864 477765443
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=80.21 E-value=4.9 Score=38.68 Aligned_cols=30 Identities=20% Similarity=0.367 Sum_probs=26.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|.|.|.|..+|+-|+..|++++..|
T Consensus 156 l~Gk~vvViGrS~iVG~Pla~lL~~~~atV 185 (284)
T PRK14190 156 ISGKHVVVVGRSNIVGKPVGQLLLNENATV 185 (284)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEE
Confidence 479999999999999999999999887543
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=80.02 E-value=3.6 Score=40.90 Aligned_cols=36 Identities=14% Similarity=0.270 Sum_probs=28.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.+.+|+|+|+ |-+|...++-+...|. ++|++..|++
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~--~~Vi~~~~~~ 204 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGA--AEIVCADVSP 204 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--cEEEEEeCCH
Confidence 5789999986 9999999887766664 4677777764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 492 | ||||
| 4dqv_A | 478 | Crystal Structure Of Reductase (R) Domain Of Non-Ri | 7e-06 |
| >pdb|4DQV|A Chain A, Crystal Structure Of Reductase (R) Domain Of Non-Ribosomal Peptide Synthetase From Mycobacterium Tuberculosis Length = 478 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 492 | |||
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 2e-38 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-11 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 1e-10 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 3e-06 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 7e-06 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 1e-05 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 2e-05 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 7e-05 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 3e-04 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 6e-04 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 7e-04 |
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 145 bits (366), Expect = 2e-38
Identities = 72/372 (19%), Positives = 117/372 (31%), Gaps = 73/372 (19%)
Query: 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRV 70
E +T+L+TGATGFL + V ++LR +L L+RA + A R D
Sbjct: 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDP--- 128
Query: 71 LKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKL----DVVINLAATTNF 126
+ H L ++++ +V GD + DLG L + MW +L D++++ AA N
Sbjct: 129 ---ELLRHFKELAADRLEVVAGDKSEPDLG-----LDQPMWRRLAETVDLIVDSAAMVNA 180
Query: 127 DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNG 186
Y N G ++ + KL +VSTA V
Sbjct: 181 FP-YHELFGPNVAGTAELIRIALT-TKLKPFTYVSTADV-------------------GA 219
Query: 187 ASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246
A E + +G GW Y +K GE+
Sbjct: 220 AIEPSAFTEDADIRVISPTRTVDG---------------------GWAGGYGTSKWAGEV 258
Query: 247 FIEHLKE--NMSVAIVRPTIITGTYKEPFPGWAEG-----IRTIDSLAVGY---GKGRLT 296
+ + + VA+ R +I + + +A G
Sbjct: 259 LLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLS--LMATGIAPRSFYEPD 316
Query: 297 CFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPL----IYTNLQ 352
+ D +P V AI V A Y V + + + L
Sbjct: 317 SEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLI 376
Query: 353 DYAYRYFTKKPW 364
+ Y +
Sbjct: 377 EAGYPIRRIDDF 388
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.0 bits (160), Expect = 2e-11
Identities = 78/608 (12%), Positives = 165/608 (27%), Gaps = 215/608 (35%)
Query: 23 FLAKIF----VEKILRVQPNVKKLYLLLRAADAKSATV--RFHNEIIGKD----LFRVLK 72
I ++ I+ + V L +K + +F E++ + + +
Sbjct: 41 MPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT 100
Query: 73 EKNGTHL---------NALISEKITLVPGDITREDL------------------------ 99
E+ + + L ++ +++R
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160
Query: 100 -G--------VKDSNLREEM-----WNKL-------DVVINLAA-----TTNFDERYD-- 131
G ++ +M W L V+ L N+ R D
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220
Query: 132 VALDLNTFGAKHVLN--FSKKCAK--LIVLVHVSTAFVWGEESGMLYESSFKMG------ 181
+ L + L K + L+VL++V A W ++F +
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW---------NAFNLSCKILLT 271
Query: 182 -------DTLNGASGLDIDVE---------------RQVVEQELNEL--QAEGASEEAIT 217
D L+ A+ I ++ + ++ +L + + ++
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS 331
Query: 218 L--AMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPG 275
+ G+ + N T ++ E + L+ Y++ F
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTII-ESSLNVLEPA-------------EYRKMF-- 375
Query: 276 WAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNI 335
D L+V F IP +++++ SDV +
Sbjct: 376 --------DRLSV---------FPPSAH-----IPTI------LLSLIWFDVIKSDVMVV 407
Query: 336 YQVGSSLRNPLIYTNLQDYAYR----YFTKKP-----------WINKDGKPVKVGKITVF 380
V + L+ ++ Y K ++ P +
Sbjct: 408 --VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI 465
Query: 381 HDMASFYRYMTVRYILPLKGLELANAAFCKYFQSKYNDLN---RKI-------------- 423
Y Y + + LK +E F+ + D +KI
Sbjct: 466 PPYLDQYFYSHIGH--HLKNIEHPERM--TLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521
Query: 424 NFVMRLVELYRPYLFFGGIFDDKNTEKLRLVARDNGVETDIFYFDPKCIDWEDYFINTHI 483
N + +L + Y+PY I D+ + + I F PK E+ I +
Sbjct: 522 NTLQQL-KFYKPY-----ICDNDPKYERLV--------NAILDFLPKI---EENLICSKY 564
Query: 484 PGIVKYAF 491
+++ A
Sbjct: 565 TDLLRIAL 572
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 36/309 (11%), Positives = 70/309 (22%), Gaps = 97/309 (31%)
Query: 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEK 74
V GATG L + A R
Sbjct: 16 YAVLGATGLLGHHAARA-------------IRAAGHDLVLIHR----------------- 45
Query: 75 NGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVAL 134
+ + L + ++ L + LD VI A R
Sbjct: 46 PSSQIQRLAYLEPECRVAEMLDHAG------LERALRG-LDGVIFSAGYYPSRPRRWQEE 98
Query: 135 -DLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDID 193
+ A++ +++V +A+ GL
Sbjct: 99 VASALGQTNPFYAACLQ-ARVPRILYVGSAYAMPR-----------------HPQGLPGH 140
Query: 194 VERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI-EHLK 252
E ++ ++YV K + E +
Sbjct: 141 -------------------EGLFYDSLPS----------GKSSYVLCKWALDEQAREQAR 171
Query: 253 ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPAD 312
+ V I P ++ G T + G G +T ++ + ++D
Sbjct: 172 NGLPVVIGIPGMVLG------ELDIG--PTTGRVITAIGNGEMTHYVAGQRNVIDA---A 220
Query: 313 MVVNAIVVA 321
+++A
Sbjct: 221 EAGRGLLMA 229
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 36/172 (20%), Positives = 59/172 (34%), Gaps = 48/172 (27%)
Query: 10 LENKTILVTGATGF----LAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGK 65
LEN+TIL+TG GF LA F E +++
Sbjct: 8 LENQTILITGGAGFVGSNLAFHFQEN-------------------------HPKAKVVVL 42
Query: 66 D------LFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVIN 119
D LF + + H LI K ++ DI LR D + +
Sbjct: 43 DKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLD------LRRLEKLHFDYLFH 96
Query: 120 LAA---TTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168
AA TT ++ + N ++L ++ +++ S+A V+G
Sbjct: 97 QAAVSDTTMLNQELVM--KTNYQAFLNLLEIARSKK--AKVIYASSAGVYGN 144
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 7e-06
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 64 GKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAAT 123
G +L R+L E++ SE D+T ++D + + + DV+IN AA
Sbjct: 13 GIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFP-RLEDF-IIK---KRPDVIINAAAM 67
Query: 124 TNFD---ERYDVALDLNTFGAKHVLNFSKKCAKL-IVLVHVSTAFV 165
T+ D + A +N +H+ + + +VH+ST +V
Sbjct: 68 TDVDKCEIEKEKAYKINAEAVRHI---VRAGKVIDSYIVHISTDYV 110
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 25/164 (15%), Positives = 47/164 (28%), Gaps = 39/164 (23%)
Query: 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFR 69
L N ++V G GF+ V+++L N++ D
Sbjct: 30 LANTNVMVVGGAGFVGSNLVKRLLE----------------------LGVNQVHVVDNLL 67
Query: 70 VLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDER 129
+ +N + IT D L + ++ D V +LA
Sbjct: 68 -----SAEKINVPDHPAVRFSETSIT-------DDALLASLQDEYDYVFHLATYHGNQ-S 114
Query: 130 Y----DVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169
+ NT + K +L +V+ + E+
Sbjct: 115 SIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEK 158
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 52/159 (32%)
Query: 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVL 71
N+ +LVTGATG L G+ + +
Sbjct: 2 NRRVLVTGATGLL---------------------------------------GRAVHKEF 22
Query: 72 KEKNGTHLNALISE-KITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD--- 127
++ N + + ++ + V + + + V+++ AA D
Sbjct: 23 QQNNWHAVGCGFRRARPKFEQVNLLDSN-AVHHI-IHD---FQPHVIVHCAAERRPDVVE 77
Query: 128 ERYDVALDLNTFGAKHVLNFSKKCAKL-IVLVHVSTAFV 165
+ D A LN + ++ +K+ A + L+++S+ +V
Sbjct: 78 NQPDAASQLNVDASGNL---AKEAAAVGAFLIYISSDYV 113
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 7e-05
Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 39/161 (24%)
Query: 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFR 69
++ K +L+ G GF+ ++IL E+ G D+
Sbjct: 22 MKAKKVLILGVNGFIGHHLSKRILE----------------------TTDWEVFGMDMQT 59
Query: 70 VLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAAT---TNF 126
L + E++ GDIT + E K DV++ L A +
Sbjct: 60 ----DRLGDL--VKHERMHFFEGDIT------INKEWVEYHVKKCDVILPLVAIATPATY 107
Query: 127 DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167
++ +L+ ++ + K K + V ST+ V+G
Sbjct: 108 VKQPLRVFELDFEANLPIVRSAVKYGKHL--VFPSTSEVYG 146
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 32/156 (20%), Positives = 51/156 (32%), Gaps = 39/156 (25%)
Query: 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEK 74
+L+ G GF+ E++LR H E+ G D+
Sbjct: 3 VLILGVNGFIGNHLTERLLR----------------------EDHYEVYGLDIGS----D 36
Query: 75 NGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAAT---TNFDERYD 131
+ L V GDI+ S E K DVV+ L A +
Sbjct: 37 AISRF--LNHPHFHFVEGDIS------IHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPL 88
Query: 132 VALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167
+L+ ++ + K K I + ST+ V+G
Sbjct: 89 RVFELDFEENLRIIRYCVKYRKRI--IFPSTSEVYG 122
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 6e-04
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 18/106 (16%)
Query: 64 GKDLFRVLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAAT 123
GK L L + DIT V+ ++E + ++I+ AA
Sbjct: 18 GKQLQEELNPEEYDIYPFDKKL------LDITNIS-QVQQV-VQE---IRPHIIIHCAAY 66
Query: 124 TNFD---ERYDVALDLNTFGAKHVLNFSKKCAKL-IVLVHVSTAFV 165
T D + D+A +N GA++V + + LV++ST +V
Sbjct: 67 TKVDQAEKERDLAYVINAIGARNV---AVASQLVGAKLVYISTDYV 109
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 7e-04
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47
M + + L+N+TIL+TG TG K FV K+L N KK+ + R
Sbjct: 10 MSMPNHQNMLDNQTILITGGTGSFGKCFVRKVLD-TTNAKKIIVYSR 55
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 492 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.98 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.98 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.98 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.98 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.97 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.97 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.97 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.97 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.97 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.97 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.97 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.97 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.97 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.97 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.97 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.97 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.97 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.97 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.97 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.97 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.97 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.97 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.96 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.96 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.96 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.96 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.96 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.96 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.96 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.96 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.96 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.96 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.96 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.95 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.95 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.95 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.95 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.94 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.94 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.94 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.93 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.93 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.93 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.93 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.93 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.93 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.92 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.92 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.92 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.91 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.9 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.9 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.9 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.89 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.89 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.88 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.88 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.87 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.87 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.86 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.86 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.85 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.85 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.85 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.84 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.84 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.84 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.84 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.84 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.84 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.84 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.84 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.83 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.83 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.83 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.83 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.83 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.83 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.82 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.82 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.82 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.82 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.82 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.82 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.82 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.81 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.81 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.81 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.81 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.81 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.81 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.81 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.81 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.81 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.81 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.81 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.81 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.81 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.8 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.8 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.8 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.8 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.8 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.8 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.8 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.8 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.8 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.8 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.8 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.8 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.8 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.8 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.8 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.8 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.8 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.8 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.79 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.79 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.79 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.79 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.79 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.79 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.79 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.79 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.79 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.79 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.79 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.79 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.79 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.79 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.79 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.79 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.79 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.79 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.79 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.79 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.79 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.78 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.78 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.78 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.78 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.78 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.78 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.78 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.78 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.78 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.78 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.78 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.78 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.78 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.78 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.78 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.78 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.78 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.78 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.77 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.77 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.77 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.77 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.77 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.77 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.77 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.77 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.77 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.77 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.77 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.76 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.76 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.76 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.76 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.76 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.76 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.76 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.76 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.76 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.76 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.76 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.76 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.76 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.76 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.76 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.76 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.76 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.76 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.76 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.76 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.76 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.76 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.76 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.76 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.76 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.76 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.75 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.75 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.75 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.75 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.75 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.75 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.75 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.75 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.75 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.75 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.75 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.75 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.75 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.75 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.75 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.74 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.74 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.74 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.74 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.74 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.74 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.74 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.74 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.74 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.74 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.74 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.74 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.72 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.72 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.72 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.72 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.72 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.72 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.72 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.71 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.71 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.71 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.71 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.7 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.7 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.7 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.7 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.7 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.7 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.7 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.69 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.69 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.69 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.69 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.69 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.68 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.68 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.67 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.67 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.67 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.65 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.64 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.64 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.63 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.63 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.61 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.61 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.61 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.6 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.6 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.59 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.59 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.58 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.57 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.57 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.57 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.54 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.54 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.53 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.52 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.44 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.39 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.32 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.31 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.25 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.12 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.09 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.09 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.06 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.04 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.01 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.95 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.94 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.83 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.66 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.66 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.62 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.62 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.58 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.33 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.18 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.12 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.02 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.97 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.78 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.77 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.75 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.7 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.68 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.64 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.58 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.55 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.46 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.45 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.39 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.38 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.13 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.05 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 96.77 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.66 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 96.59 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 96.52 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.51 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.5 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.49 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 96.33 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 96.31 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 96.26 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.24 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.21 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.16 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.14 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.02 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.01 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 95.96 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 95.88 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 95.82 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 95.78 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 95.76 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 95.72 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 95.66 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 95.65 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 95.57 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 95.53 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 95.51 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 95.43 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 95.4 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 95.39 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 95.39 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 95.34 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 95.31 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 95.3 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 95.29 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 95.23 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 95.2 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 95.19 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 95.11 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 95.06 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 95.02 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 94.97 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 94.96 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 94.92 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 94.92 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 94.91 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 94.89 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 94.88 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 94.86 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 94.81 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 94.78 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 94.78 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 94.75 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 94.75 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 94.73 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 94.52 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 94.52 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 94.49 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 94.45 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 94.42 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 94.41 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 94.4 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 94.2 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 94.16 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 94.15 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 94.12 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 94.06 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 93.91 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 93.91 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 93.91 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 93.77 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 93.77 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 93.77 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 93.61 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 93.45 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 93.44 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 93.24 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 93.22 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 93.13 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 92.69 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 92.63 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 92.54 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 92.44 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 92.41 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 92.4 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 92.38 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 92.18 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 92.14 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 91.97 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 91.91 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 91.85 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 91.85 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 91.72 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 91.66 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 91.36 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 91.16 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 91.13 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 91.11 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 91.08 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 91.02 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 91.02 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 90.83 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 90.81 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 90.73 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 90.65 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 90.56 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 90.53 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 90.3 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 90.09 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 90.07 | |
| 1tt5_B | 434 | Ubiquitin-activating enzyme E1C isoform 1; cell cy | 89.95 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 89.77 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 89.77 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 89.62 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 89.56 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 89.47 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 89.42 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 89.38 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 89.36 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 89.35 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 89.34 | |
| 1tt5_A | 531 | APPBP1, amyloid protein-binding protein 1; cell cy | 89.33 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 89.3 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 88.99 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 88.61 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 88.49 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 88.24 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 88.16 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 88.09 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 87.88 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 87.69 | |
| 3cmm_A | 1015 | Ubiquitin-activating enzyme E1 1; UBA1, protein tu | 87.65 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 87.51 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 87.49 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 87.45 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 87.4 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 87.28 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 86.94 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 86.9 | |
| 2nvu_B | 805 | Maltose binding protein/NEDD8-activating enzyme E1 | 86.82 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 86.81 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 86.8 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 86.71 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 86.51 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 86.43 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 86.31 | |
| 1u8x_X | 472 | Maltose-6'-phosphate glucosidase; structural genom | 86.29 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 86.28 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 86.27 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 86.18 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 86.04 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 85.88 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 85.81 | |
| 3cmm_A | 1015 | Ubiquitin-activating enzyme E1 1; UBA1, protein tu | 85.75 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 85.7 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 85.4 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 85.4 | |
| 4gqb_A | 637 | Protein arginine N-methyltransferase 5; TIM barrel | 85.39 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 85.14 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 85.14 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 85.03 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 84.77 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-35 Score=290.40 Aligned_cols=267 Identities=19% Similarity=0.231 Sum_probs=208.0
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH-HHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA-TVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~-~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.+++|+|||||||||||++|+++|++.|+ +|++++|+...... .+.+. ...+ .....++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~-------------~~~~----~~~~~~~ 81 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQ---VVIGLDNFSTGHQYNLDEVK-------------TLVS----TEQWSRF 81 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCHHHHHHHH-------------HTSC----HHHHTTE
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCCCchhhhhhhh-------------hccc----cccCCce
Confidence 35789999999999999999999999996 56999997654321 11111 1000 0011679
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
+++.+|++ +.+.+..+++++|+|||+||..... ......+++|+.||.+++++|++. ++++|||+||+.
T Consensus 82 ~~~~~Dl~-------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~ 153 (351)
T 3ruf_A 82 CFIEGDIR-------DLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSS 153 (351)
T ss_dssp EEEECCTT-------CHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG
T ss_pred EEEEccCC-------CHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHH
Confidence 99999999 5666678889999999999976543 345678999999999999999998 789999999999
Q ss_pred eeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 165 VWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 165 v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
+|+...+ .++|+.. ..+.+.|+.||+.
T Consensus 154 vyg~~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~ 181 (351)
T 3ruf_A 154 TYGDHPALPKVEENI----------------------------------------------------GNPLSPYAVTKYV 181 (351)
T ss_dssp GGTTCCCSSBCTTCC----------------------------------------------------CCCCSHHHHHHHH
T ss_pred hcCCCCCCCCccCCC----------------------------------------------------CCCCChhHHHHHH
Confidence 9986542 2333221 1567899999999
Q ss_pred HHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHH
Q 037479 244 GEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVA 321 (492)
Q Consensus 244 aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~ 321 (492)
+|++++.+ ..+++++++||+.|||+...+...+. .....++..+..|....++++++..+++|||||+|++++.+
T Consensus 182 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~ 258 (351)
T 3ruf_A 182 NEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYA---AVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILS 258 (351)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchh---hHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence 99999876 34899999999999999875532211 23445666677777777889999999999999999999999
Q ss_pred HHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 322 VVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 322 ~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+....... +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 259 ~~~~~~~~---~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 295 (351)
T 3ruf_A 259 ALAKDSAK---DNIYNVAVG--DRTTLNELSGYIYDELNLIH 295 (351)
T ss_dssp HTCCGGGC---SEEEEESCS--CCEEHHHHHHHHHHHHHTTC
T ss_pred HhhccccC---CCEEEeCCC--CcccHHHHHHHHHHHhCccc
Confidence 87522222 789999998 89999999999999999854
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=285.37 Aligned_cols=258 Identities=23% Similarity=0.283 Sum_probs=200.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|||||||||||++|+++|++.|+++ +|+++.|....... +++. ++ ....++.+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~-~~l~-~~-------------------~~~~~~~~ 79 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNL-NNVK-SI-------------------QDHPNYYF 79 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCG-GGGT-TT-------------------TTCTTEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccch-hhhh-hh-------------------ccCCCeEE
Confidence 467899999999999999999999999765 66777776533221 1111 00 01258999
Q ss_pred EecCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 90 VPGDITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
+.+|++ +.+.+..++++ +|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+||+.
T Consensus 80 ~~~Dl~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~ 151 (346)
T 4egb_A 80 VKGEIQ-------NGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDE 151 (346)
T ss_dssp EECCTT-------CHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGG
T ss_pred EEcCCC-------CHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchH
Confidence 999999 56666677776 99999999987654 456678999999999999999998 789999999999
Q ss_pred eecccc--cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 165 VWGEES--GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 165 v~~~~~--~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
+|+... ..++|+. +..+.+.|+.||+
T Consensus 152 vy~~~~~~~~~~E~~----------------------------------------------------~~~p~~~Y~~sK~ 179 (346)
T 4egb_A 152 VYGSLGKTGRFTEET----------------------------------------------------PLAPNSPYSSSKA 179 (346)
T ss_dssp GGCCCCSSCCBCTTS----------------------------------------------------CCCCCSHHHHHHH
T ss_pred HhCCCCcCCCcCCCC----------------------------------------------------CCCCCChhHHHHH
Confidence 998752 2333332 1146789999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHH
Q 037479 243 MGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 243 ~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
.+|++++.+ ..+++++++||+.|||+...+. .....++..+..|....+++++...+++|+|+|+|++++.
T Consensus 180 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 252 (346)
T 4egb_A 180 SADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-------KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDV 252 (346)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-------SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-------chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHH
Confidence 999999987 3489999999999999887431 3345666777777766778999999999999999999999
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
++.... . +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 253 ~~~~~~--~---g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 288 (346)
T 4egb_A 253 VLHKGR--V---GEVYNIGGN--NEKTNVEVVEQIITLLGKTK 288 (346)
T ss_dssp HHHHCC--T---TCEEEECCS--CCEEHHHHHHHHHHHHTCCG
T ss_pred HHhcCC--C---CCEEEECCC--CceeHHHHHHHHHHHhCCCc
Confidence 998533 2 789999998 88999999999999999764
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-34 Score=278.18 Aligned_cols=243 Identities=18% Similarity=0.166 Sum_probs=197.3
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|||||||||||++|+++|++.|+ +|++++|+..... + +++.++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~----~--------------------------~~~~~~~ 48 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN---TPIILTRSIGNKA----I--------------------------NDYEYRV 48 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCC-----------------------------------CCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCCCCccc----C--------------------------CceEEEE
Confidence 47999999999999999999999996 5699999832110 0 3678999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc-
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES- 170 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~- 170 (492)
+|++ + ++ +..+++++|+|||+||..... .....+++|+.|+.+++++|++. ++++|||+||..+|+...
T Consensus 49 ~Dl~-~------~~-~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~ 118 (311)
T 3m2p_A 49 SDYT-L------ED-LINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETS 118 (311)
T ss_dssp CCCC-H------HH-HHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGG
T ss_pred cccc-H------HH-HHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCC
Confidence 9998 3 23 457788999999999987665 45667899999999999999998 789999999999998654
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
..++|+.. ..+.+.|+.||+.+|+++++
T Consensus 119 ~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~~E~~~~~ 146 (311)
T 3m2p_A 119 LPWNEKEL----------------------------------------------------PLPDLMYGVSKLACEHIGNI 146 (311)
T ss_dssp CSBCTTSC----------------------------------------------------CCCSSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC----------------------------------------------------CCCCchhHHHHHHHHHHHHH
Confidence 23333321 14678999999999999998
Q ss_pred h--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcC
Q 037479 251 L--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 251 ~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~ 328 (492)
+ ..+++++++||+.|||+...+. .....++..+..|....++++++..+++|+++|+|++++.++.+..
T Consensus 147 ~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-- 217 (311)
T 3m2p_A 147 YSRKKGLCIKNLRFAHLYGFNEKNN-------YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-- 217 (311)
T ss_dssp HHHHSCCEEEEEEECEEECSCC--C-------CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT--
T ss_pred HHHHcCCCEEEEeeCceeCcCCCCC-------CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC--
Confidence 7 3689999999999999987532 2345666677778777778899999999999999999999887432
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 329 PSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 329 ~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 218 ~---~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (311)
T 3m2p_A 218 V---SGTFNIGSG--DALTNYEVANTINNAFGNKD 247 (311)
T ss_dssp C---CEEEEECCS--CEECHHHHHHHHHHHTTCTT
T ss_pred C---CCeEEeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 2 789999998 89999999999999999765
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-34 Score=285.35 Aligned_cols=270 Identities=17% Similarity=0.182 Sum_probs=205.2
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.|++|+|||||||||||++|+++|++. |+ +|++++|+........ ...++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~--------------------------~~~~v 71 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDW---EVFGMDMQTDRLGDLV--------------------------KHERM 71 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSC---EEEEEESCCTTTGGGG--------------------------GSTTE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCC---EEEEEeCChhhhhhhc--------------------------cCCCe
Confidence 366789999999999999999999998 75 5699999764422100 02689
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
+++.+|+++ +.+.+..+++++|+|||+||..... +.....+++|+.||.+++++|++. + ++|||+||+.
T Consensus 72 ~~~~~Dl~~------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~ 143 (372)
T 3slg_A 72 HFFEGDITI------NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSE 143 (372)
T ss_dssp EEEECCTTT------CHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGG
T ss_pred EEEeCccCC------CHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHH
Confidence 999999983 3444557788999999999987643 356678899999999999999998 5 8999999999
Q ss_pred eeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 165 VWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 165 v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
+||...+ .+.|+..+... .....+.+.|+.||+.
T Consensus 144 vyg~~~~~~~~e~~~~~~~---------------------------------------------~p~~~p~~~Y~~sK~~ 178 (372)
T 3slg_A 144 VYGMCADEQFDPDASALTY---------------------------------------------GPINKPRWIYACSKQL 178 (372)
T ss_dssp GGBSCCCSSBCTTTCCEEE---------------------------------------------CCTTCTTHHHHHHHHH
T ss_pred HhCCCCCCCCCcccccccc---------------------------------------------CCCCCCCCcHHHHHHH
Confidence 9987542 33343322000 0001355689999999
Q ss_pred HHHHHHHhcC-CCcEEEEeCCceecCCCCCCCccccCc-CchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHH
Q 037479 244 GEMFIEHLKE-NMSVAIVRPTIITGTYKEPFPGWAEGI-RTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVA 321 (492)
Q Consensus 244 aE~~v~~~~~-~~~~~ivRPs~v~g~~~~p~~gw~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~ 321 (492)
+|++++++.. +++++|+||+.|||+...+..++.... ..+..++..+..|....++++++..+++|+|+|+|++++.+
T Consensus 179 ~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 258 (372)
T 3slg_A 179 MDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKI 258 (372)
T ss_dssp HHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHH
Confidence 9999998733 899999999999999876433222221 23445666667777777888899999999999999999999
Q ss_pred HHhhhcCCCCCCcEEEecC-CCCCcccHHHHHHHHHHHhhcCCC
Q 037479 322 VVAHAKQPSDVNNIYQVGS-SLRNPLIYTNLQDYAYRYFTKKPW 364 (492)
Q Consensus 322 ~~~~~~~~~~~~~iy~i~~-~~~~~~t~~e~~~~~~~~~~~~p~ 364 (492)
+........ +++||+++ + .++|+.|+++.+.+.+|..+.
T Consensus 259 ~~~~~~~~~--~~~~ni~~~~--~~~s~~e~~~~i~~~~g~~~~ 298 (372)
T 3slg_A 259 IENSNGVAT--GKIYNIGNPN--NNFSVRELANKMLELAAEFPE 298 (372)
T ss_dssp HHCGGGTTT--TEEEEECCTT--CEEEHHHHHHHHHHHHHHCTT
T ss_pred HhcccCcCC--CceEEeCCCC--CCccHHHHHHHHHHHhCCCcc
Confidence 985432122 78999999 5 699999999999999998653
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-34 Score=284.33 Aligned_cols=263 Identities=19% Similarity=0.165 Sum_probs=202.0
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHh--hCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILR--VQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~--~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
-+++|+|||||||||||++|+++|++ .|+ +|+++.|+........+....+ .........+
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~---~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~~~ 69 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKA---KVVVLDKFRSNTLFSNNRPSSL--------------GHFKNLIGFK 69 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTS---EEEEEECCCCC-------CCCC--------------CCGGGGTTCC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCC---eEEEEECCCccccccccchhhh--------------hhhhhccccC
Confidence 36789999999999999999999999 775 5699999765321111100000 0001112356
Q ss_pred eEEEecCCCCCCCCCCchhhHHHh-ccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 87 ITLVPGDITREDLGVKDSNLREEM-WNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
+.++.+|++ +.+..+.+ ..++|+|||+||.... .+.+...+++|+.||.+++++|++. +++ |||+||+.
T Consensus 70 ~~~~~~Dl~-------d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~ 140 (362)
T 3sxp_A 70 GEVIAADIN-------NPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAG 140 (362)
T ss_dssp SEEEECCTT-------CHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGG
T ss_pred ceEEECCCC-------CHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHH
Confidence 789999999 55556566 6799999999997764 3567889999999999999999987 677 99999999
Q ss_pred eecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 165 VWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 165 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
+||...+.++|+.. ..+.+.|+.||+.+
T Consensus 141 vyg~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~~ 168 (362)
T 3sxp_A 141 VYGNTKAPNVVGKN----------------------------------------------------ESPENVYGFSKLCM 168 (362)
T ss_dssp GGCSCCSSBCTTSC----------------------------------------------------CCCSSHHHHHHHHH
T ss_pred HhCCCCCCCCCCCC----------------------------------------------------CCCCChhHHHHHHH
Confidence 99876544444321 15678999999999
Q ss_pred HHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 245 EMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 245 E~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
|++++.+...++++++||+.|||+...+...+ ......++..+..|....+++++...+++|+|+|||++++.++..
T Consensus 169 E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~ 245 (362)
T 3sxp_A 169 DEFVLSHSNDNVQVGLRYFNVYGPREFYKEKT---ASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKA 245 (362)
T ss_dssp HHHHHHTTTTSCEEEEEECSEESTTCGGGGGG---SCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTC
T ss_pred HHHHHHHhccCCEEEEEeCceeCcCCCCCCcc---hhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhc
Confidence 99999985559999999999999987542211 123456666777777767778888999999999999999999874
Q ss_pred hhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 325 HAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
. .. + +||++++ .++|+.|+++.+.+.+|
T Consensus 246 ~--~~---g-~~~i~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 246 Q--KS---G-VYNVGYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp S--SC---E-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred C--CC---C-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence 2 11 6 9999998 89999999999999999
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=279.88 Aligned_cols=254 Identities=17% Similarity=0.158 Sum_probs=196.1
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.-.++|+|||||||||||++|+++|++.|++ |+++.|+... .++
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~---------------------------------~~~ 58 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRT---VRGFDLRPSG---------------------------------TGG 58 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCC---EEEEESSCCS---------------------------------SCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCE---EEEEeCCCCC---------------------------------CCc
Confidence 3457799999999999999999999999975 4888887542 356
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcch-hHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDE-RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~-~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
.++.+|++ +.+.+..+++++|+|||+||...... .....+++|+.||.+++++|++. ++++|||+||++||
T Consensus 59 ~~~~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~vy 130 (347)
T 4id9_A 59 EEVVGSLE-------DGQALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEVY 130 (347)
T ss_dssp SEEESCTT-------CHHHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGT
T ss_pred cEEecCcC-------CHHHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHHh
Confidence 78999999 56666688899999999999876653 34788999999999999999997 78999999999999
Q ss_pred cccc---cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 167 GEES---GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 167 ~~~~---~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
|... ..+.|.. +..+.+.|+.||+.
T Consensus 131 g~~~~~~~~~~E~~----------------------------------------------------~~~~~~~Y~~sK~~ 158 (347)
T 4id9_A 131 PENRPEFLPVTEDH----------------------------------------------------PLCPNSPYGLTKLL 158 (347)
T ss_dssp TTTSCSSSSBCTTS----------------------------------------------------CCCCCSHHHHHHHH
T ss_pred CCCCCCCCCcCCCC----------------------------------------------------CCCCCChHHHHHHH
Confidence 8731 1223321 12467899999999
Q ss_pred HHHHHHHh--cCCCcEEEEeCCcee-------------cCCCCCCCcccc----CcCchHHHHHhccCceeeEEecCCCc
Q 037479 244 GEMFIEHL--KENMSVAIVRPTIIT-------------GTYKEPFPGWAE----GIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 244 aE~~v~~~--~~~~~~~ivRPs~v~-------------g~~~~p~~gw~~----~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
+|++++.+ ..+++++|+||+.|| |+...+...+-. .-.....++..+..|....++++++.
T Consensus 159 ~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 238 (347)
T 4id9_A 159 GEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNEN 238 (347)
T ss_dssp HHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTT
T ss_pred HHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCc
Confidence 99999876 458999999999999 554321100000 00223445666677776677888888
Q ss_pred ccce----eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 305 IVDV----IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 305 ~~d~----v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
..++ |+|+|+|++++.++..... . +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 239 ~~~~~~~~i~v~Dva~ai~~~~~~~~~-~---~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 295 (347)
T 4id9_A 239 GRPFRMHITDTRDMVAGILLALDHPEA-A---GGTFNLGAD--EPADFAALLPKIAALTGLPI 295 (347)
T ss_dssp CCBCEECEEEHHHHHHHHHHHHHCGGG-T---TEEEEESCS--SCEEHHHHHHHHHHHHCCCE
T ss_pred ccCCccCcEeHHHHHHHHHHHhcCccc-C---CCeEEECCC--CcccHHHHHHHHHHHhCCCC
Confidence 9999 9999999999999985422 2 789999998 89999999999999998754
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-33 Score=272.57 Aligned_cols=248 Identities=17% Similarity=0.206 Sum_probs=189.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|+ +|+++.|....... ....+++++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~---------------------------~~~~~~~~~~~ 50 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY---EVVVVDNLSSGRRE---------------------------FVNPSAELHVR 50 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCCSSCCGG---------------------------GSCTTSEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC---EEEEEeCCCCCchh---------------------------hcCCCceEEEC
Confidence 6899999999999999999999996 55888887654221 01267889999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
|++++ + ...++++ |+|||+||.... .+.+...+++|+.|+.+++++|++. ++++|||+||..+||..
T Consensus 51 Dl~d~-------~-~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~ 120 (312)
T 3ko8_A 51 DLKDY-------S-WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDA 120 (312)
T ss_dssp CTTST-------T-TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSC
T ss_pred ccccH-------H-HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCC
Confidence 99953 3 3355566 999999996532 2456788999999999999999987 78899999999999875
Q ss_pred cc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 170 SG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 170 ~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
.+ .++|+. +..+.+.|+.||+.+|+++
T Consensus 121 ~~~~~~e~~----------------------------------------------------~~~p~~~Y~~sK~~~e~~~ 148 (312)
T 3ko8_A 121 DVIPTPEEE----------------------------------------------------PYKPISVYGAAKAAGEVMC 148 (312)
T ss_dssp SSSSBCTTS----------------------------------------------------CCCCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCC----------------------------------------------------CCCCCChHHHHHHHHHHHH
Confidence 42 233331 1146789999999999999
Q ss_pred HHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCc-eeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 249 EHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKG-RLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 249 ~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
+.+ ..+++++++||+.|||+...+ .....++..+..+ ......+++...+++||++|+|++++.++.+.
T Consensus 149 ~~~~~~~g~~~~~lrp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 220 (312)
T 3ko8_A 149 ATYARLFGVRCLAVRYANVVGPRLRH--------GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKF 220 (312)
T ss_dssp HHHHHHHCCEEEEEEECEEECTTCCS--------SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEeeccccCcCCCC--------ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhc
Confidence 887 348999999999999987642 2233445444444 33456788889999999999999999999852
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
...... +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 221 ~~~~~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 255 (312)
T 3ko8_A 221 EEMDAP-FLALNVGNV--DAVRVLDIAQIVAEVLGLRP 255 (312)
T ss_dssp HHSCCS-EEEEEESCS--SCEEHHHHHHHHHHHHTCCC
T ss_pred cccCCC-CcEEEEcCC--CceeHHHHHHHHHHHhCCCC
Confidence 211111 789999998 89999999999999999765
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-32 Score=270.28 Aligned_cols=265 Identities=16% Similarity=0.158 Sum_probs=197.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH-HHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA-TVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~-~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.+|+|||||||||||++++++|++.|+ +|+++.|....... .+++. .. ...++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~-------------~~--------~~~~~~~ 59 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY---DVVIADNLVNSKREAIARIE-------------KI--------TGKTPAF 59 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCCSSSCTHHHHHHH-------------HH--------HSCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC---cEEEEecCCcchHHHHHHHH-------------hh--------cCCCceE
Confidence 468999999999999999999999996 55889887655432 11111 10 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 90 VPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
+.+|++ +.+.+..+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+.
T Consensus 60 ~~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~ 131 (341)
T 3enk_A 60 HETDVS-------DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSAT 131 (341)
T ss_dssp ECCCTT-------CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGG
T ss_pred EEeecC-------CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecce
Confidence 999999 5565667777 899999999987543 345678999999999999999987 788999999999
Q ss_pred eeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 165 VWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 165 v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
+||...+ .++|... ..+.+.|+.||+.
T Consensus 132 ~~g~~~~~~~~e~~~----------------------------------------------------~~~~~~Y~~sK~~ 159 (341)
T 3enk_A 132 VYGVPERSPIDETFP----------------------------------------------------LSATNPYGQTKLM 159 (341)
T ss_dssp GBCSCSSSSBCTTSC----------------------------------------------------CBCSSHHHHHHHH
T ss_pred EecCCCCCCCCCCCC----------------------------------------------------CCCCChhHHHHHH
Confidence 9986532 2333221 1456899999999
Q ss_pred HHHHHHHh--c-CCCcEEEEeCCceecCCCCCCCccccC--cCchHHHHHhccCc--eeeEEec------CCCcccceee
Q 037479 244 GEMFIEHL--K-ENMSVAIVRPTIITGTYKEPFPGWAEG--IRTIDSLAVGYGKG--RLTCFLG------DVKGIVDVIP 310 (492)
Q Consensus 244 aE~~v~~~--~-~~~~~~ivRPs~v~g~~~~p~~gw~~~--~~~~~~~~~~~~~g--~~~~~~~------~~~~~~d~v~ 310 (492)
+|++++.+ . .+++++++||+.|||+......|.... ......++.....| ....+.+ +++..+++||
T Consensus 160 ~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~ 239 (341)
T 3enk_A 160 AEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIH 239 (341)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred HHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEE
Confidence 99999876 2 359999999999999976433332211 12233344443333 2334455 7889999999
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
|+|+|++++.++........ +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 240 v~Dva~a~~~~~~~~~~~~~--~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 288 (341)
T 3enk_A 240 VVDLARGHIAALDALERRDA--SLTVNLGTG--RGYSVLEVVRAFEKASGRAV 288 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHTS--CEEEEESCS--CCEEHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHHhhhcCCc--ceEEEeCCC--CceeHHHHHHHHHHHhCCCc
Confidence 99999999999875321111 789999998 89999999999999999754
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=273.00 Aligned_cols=250 Identities=15% Similarity=0.093 Sum_probs=191.4
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+|++|+|||||||||||++|+++|++.|+ +... ....+.
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~~--------------------------------~~~~~~ 41 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG---------LPGE--------------------------------DWVFVS 41 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTTC--------------------------------EEEECC
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC---------cccc--------------------------------cccccC
Confidence 46789999999999999999999999985 1100 013345
Q ss_pred EEecCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNK--LDVVINLAATTNF----DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
.+.+|++ +.+.+..++++ +|+|||+||.... .+.....+++|+.||.+++++|++. ++++|||+||
T Consensus 42 ~~~~D~~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS 113 (319)
T 4b8w_A 42 SKDADLT-------DTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLS 113 (319)
T ss_dssp TTTCCTT-------SHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECC
T ss_pred ceecccC-------CHHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcc
Confidence 5689998 55556677775 9999999998652 2456778999999999999999998 7899999999
Q ss_pred ceeeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc-hHHHH
Q 037479 163 AFVWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN-TYVFT 240 (492)
Q Consensus 163 ~~v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n-~Y~~s 240 (492)
.++||...+ .++|+..... +..+.+ .|+.|
T Consensus 114 ~~vyg~~~~~~~~E~~~~~~------------------------------------------------~~~p~~~~Y~~s 145 (319)
T 4b8w_A 114 TCIFPDKTTYPIDETMIHNG------------------------------------------------PPHNSNFGYSYA 145 (319)
T ss_dssp GGGSCSSCCSSBCGGGGGBS------------------------------------------------CCCSSSHHHHHH
T ss_pred hhhcCCCCCCCccccccccC------------------------------------------------CCCCCcchHHHH
Confidence 999987543 4444431100 012334 69999
Q ss_pred HHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHh----ccCceeeEEecCCCcccceeehhhh
Q 037479 241 KVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVG----YGKGRLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 241 K~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~d~v~vddv 314 (492)
|+.+|++++.+ ..+++++++||+.|||+...+.... ......++.. +..|....++++++..+++|||+|+
T Consensus 146 K~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 222 (319)
T 4b8w_A 146 KRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIED---GHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDL 222 (319)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTT---SCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCcc---ccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHH
Confidence 99999999876 3589999999999999987542211 1223344444 5667776788999999999999999
Q ss_pred hhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 315 VNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 315 a~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
|++++.++....... +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 223 a~a~~~~~~~~~~~~---~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 266 (319)
T 4b8w_A 223 AQLFIWVLREYNEVE---PIILSVGEE--DEVSIKEAAEAVVEAMDFHG 266 (319)
T ss_dssp HHHHHHHHHHCCCSS---CEEECCCGG--GCEEHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHhccccCC---ceEEEecCC--CceeHHHHHHHHHHHhCCCC
Confidence 999999998533222 679999998 89999999999999999754
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-32 Score=269.74 Aligned_cols=258 Identities=23% Similarity=0.331 Sum_probs=193.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|+|||||||||||++|+++|++.|+.. +|+++.|....... +.+. ++ . ...++.+
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~-~V~~~~r~~~~~~~-~~~~-~~-----------------~--~~~~~~~ 58 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDW-EVINIDKLGYGSNP-ANLK-DL-----------------E--DDPRYTF 58 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCCG-GGGT-TT-----------------T--TCTTEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCC-EEEEEecCcccCch-hHHh-hh-----------------c--cCCceEE
Confidence 356899999999999999999999997432 67888886532111 1110 00 0 0257899
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+.+|++ +.+....++.++|+|||+||....+ +.+...+++|+.|+.+++++|++.+..++|||+||..+|
T Consensus 59 ~~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vy 131 (336)
T 2hun_A 59 VKGDVA-------DYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVY 131 (336)
T ss_dssp EECCTT-------CHHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGG
T ss_pred EEcCCC-------CHHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHH
Confidence 999999 5555667778999999999986532 356778999999999999999987334799999999999
Q ss_pred cccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
|... ..++|+. +..+.+.|+.||+.+|
T Consensus 132 g~~~~~~~~E~~----------------------------------------------------~~~~~~~Y~~sK~~~e 159 (336)
T 2hun_A 132 GDILKGSFTEND----------------------------------------------------RLMPSSPYSATKAASD 159 (336)
T ss_dssp CCCSSSCBCTTB----------------------------------------------------CCCCCSHHHHHHHHHH
T ss_pred CCCCCCCcCCCC----------------------------------------------------CCCCCCccHHHHHHHH
Confidence 8642 2233321 1145689999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
++++.+ ..+++++++||+.|||+...+. .....++..+..|....+++++....++++++|+|++++.++.
T Consensus 160 ~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 232 (336)
T 2hun_A 160 MLVLGWTRTYNLNASITRCTNNYGPYQFPE-------KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLL 232 (336)
T ss_dssp HHHHHHHHHTTCEEEEEEECEEESTTCCTT-------SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-------chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHh
Confidence 999876 3589999999999999886431 1233455556666655667888889999999999999999886
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
.. .. +++||++++ .++|+.|+++.+.+.+|..
T Consensus 233 ~~--~~---g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 264 (336)
T 2hun_A 233 KG--ES---REIYNISAG--EEKTNLEVVKIILRLMGKG 264 (336)
T ss_dssp HC--CT---TCEEEECCS--CEECHHHHHHHHHHHTTCC
T ss_pred CC--CC---CCEEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 42 22 789999998 8999999999999999875
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=269.91 Aligned_cols=244 Identities=19% Similarity=0.240 Sum_probs=189.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.| . ++++.|...... .....++.++.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~---~v~~~~~~~~~~---------------------------~~~~~~~~~~~~ 50 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-E---IVVIDNLSSGNE---------------------------EFVNEAARLVKA 50 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-C---EEEECCCSSCCG---------------------------GGSCTTEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-C---EEEEEcCCCCCh---------------------------hhcCCCcEEEEC
Confidence 589999999999999999999998 2 244554332211 011367899999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
|++ + +....+++++|+|||+||.... .+.+...+++|+.|+.+++++|++. ++++|||+||..+||..
T Consensus 51 Dl~-------~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~ 121 (313)
T 3ehe_A 51 DLA-------A-DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEA 121 (313)
T ss_dssp CTT-------T-SCCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSC
T ss_pred cCC-------h-HHHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcC
Confidence 999 4 3345777899999999996533 2567888999999999999999987 78899999999999865
Q ss_pred cc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 170 SG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 170 ~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
.+ .++|+. +..+.+.|+.||+.+|+++
T Consensus 122 ~~~~~~E~~----------------------------------------------------~~~~~~~Y~~sK~~~e~~~ 149 (313)
T 3ehe_A 122 KVIPTPEDY----------------------------------------------------PTHPISLYGASKLACEALI 149 (313)
T ss_dssp SSSSBCTTS----------------------------------------------------CCCCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCC----------------------------------------------------CCCCCCHHHHHHHHHHHHH
Confidence 42 222321 1145689999999999999
Q ss_pred HHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCc-eeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 249 EHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKG-RLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 249 ~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
+.+ ..+++++++||+.|||+...+ ..+..++..+..+ ....++++++..+++|||+|+|++++.++..
T Consensus 150 ~~~~~~~g~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~- 220 (313)
T 3ehe_A 150 ESYCHTFDMQAWIYRFANVIGRRSTH--------GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG- 220 (313)
T ss_dssp HHHHHHTTCEEEEEECSCEESTTCCC--------SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC-
T ss_pred HHHHHhcCCCEEEEeeccccCcCCCc--------ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc-
Confidence 876 458999999999999987642 2233455555444 3445678899999999999999999998872
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
... +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 221 -~~~---~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 252 (313)
T 3ehe_A 221 -DER---VNIFNIGSE--DQIKVKRIAEIVCEELGLSP 252 (313)
T ss_dssp -CSS---EEEEECCCS--CCEEHHHHHHHHHHHTTCCC
T ss_pred -CCC---CceEEECCC--CCeeHHHHHHHHHHHhCCCC
Confidence 111 789999998 89999999999999999765
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=271.84 Aligned_cols=267 Identities=17% Similarity=0.175 Sum_probs=201.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|||||||||||++|+++|++.|+ +|++++|+..... +++. .+.++.. .....++.+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~~~----------~~~~~~~----~~~~~~~~~ 85 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ---KVVGLDNFATGHQ--RNLD----------EVRSLVS----EKQWSNFKF 85 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCH--HHHH----------HHHHHSC----HHHHTTEEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCccch--hhHH----------HHhhhcc----cccCCceEE
Confidence 6789999999999999999999999986 5689999754321 1111 0111100 000257899
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+.+|++ +.+.+..+++++|+|||+||..... +.+...+++|+.|+.+++++|++. ++++|||+||..+|
T Consensus 86 ~~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~ 157 (352)
T 1sb8_A 86 IQGDIR-------NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTY 157 (352)
T ss_dssp EECCTT-------SHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGG
T ss_pred EECCCC-------CHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhc
Confidence 999999 5565668888999999999976532 456778999999999999999987 78999999999999
Q ss_pred ccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
+...+ .++|+.. ..+.+.|+.||+.+|
T Consensus 158 ~~~~~~~~~E~~~----------------------------------------------------~~~~~~Y~~sK~~~e 185 (352)
T 1sb8_A 158 GDHPGLPKVEDTI----------------------------------------------------GKPLSPYAVTKYVNE 185 (352)
T ss_dssp TTCCCSSBCTTCC----------------------------------------------------CCCCSHHHHHHHHHH
T ss_pred CCCCCCCCCCCCC----------------------------------------------------CCCCChhHHHHHHHH
Confidence 86532 2333221 145689999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
++++.+ ..+++++++||+.|||+...+...+. .....++..+..|....++++++..+++|+++|+|++++.++.
T Consensus 186 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~ 262 (352)
T 1sb8_A 186 LYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYA---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAAT 262 (352)
T ss_dssp HHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEECceeCcCCCCCcchh---hHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHh
Confidence 999876 34899999999999998864421110 1233455555566665677889999999999999999998887
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHh---hcCC
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYF---TKKP 363 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~---~~~p 363 (492)
...... +++||++++ .++|+.|+++.+.+.+ |..+
T Consensus 263 ~~~~~~---~~~~ni~~~--~~~s~~e~~~~i~~~~~~~g~~~ 300 (352)
T 1sb8_A 263 AGLDAR---NQVYNIAVG--GRTSLNQLFFALRDGLAENGVSY 300 (352)
T ss_dssp CCGGGC---SEEEEESCS--CCEEHHHHHHHHHHHHHHTTCCC
T ss_pred ccccCC---CceEEeCCC--CCccHHHHHHHHHHHHHhcCCCC
Confidence 422222 789999998 8999999999999999 7543
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-32 Score=267.14 Aligned_cols=251 Identities=16% Similarity=0.172 Sum_probs=190.1
Q ss_pred cHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 5 SVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 5 ~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
....+.+.++|||||||||||++|+++|++.|+ +|+++.|+... ..
T Consensus 5 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~-~~------------------------------ 50 (321)
T 2pk3_A 5 HHHHHHGSMRALITGVAGFVGKYLANHLTEQNV---EVFGTSRNNEA-KL------------------------------ 50 (321)
T ss_dssp --------CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCTTC-CC------------------------------
T ss_pred ccccccCcceEEEECCCChHHHHHHHHHHHCCC---EEEEEecCCcc-cc------------------------------
Confidence 344566779999999999999999999999996 56889887543 10
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
-++.++.+|++ +.+.+..++++ +|+|||+||..... +.+...+++|+.|+.+++++|+++.++++|||
T Consensus 51 l~~~~~~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~ 123 (321)
T 2pk3_A 51 PNVEMISLDIM-------DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILT 123 (321)
T ss_dssp TTEEEEECCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred ceeeEEECCCC-------CHHHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 14788999999 55555566664 99999999986542 35678899999999999999987645789999
Q ss_pred eeeceeeccc---ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 160 VSTAFVWGEE---SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 160 vST~~v~~~~---~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+||..+|+.. ...++|+.. ..+.+.
T Consensus 124 ~SS~~v~g~~~~~~~~~~E~~~----------------------------------------------------~~~~~~ 151 (321)
T 2pk3_A 124 IGSSEEYGMILPEESPVSEENQ----------------------------------------------------LRPMSP 151 (321)
T ss_dssp EEEGGGTBSCCGGGCSBCTTSC----------------------------------------------------CBCCSH
T ss_pred EccHHhcCCCCCCCCCCCCCCC----------------------------------------------------CCCCCc
Confidence 9999999863 223333321 135689
Q ss_pred HHHHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccC---c--eeeEEecCCCccccee
Q 037479 237 YVFTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGK---G--RLTCFLGDVKGIVDVI 309 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~---g--~~~~~~~~~~~~~d~v 309 (492)
|+.||+.+|++++.+ ..+++++++||+.|||+...+ . .....++..+.. | ......+++....+++
T Consensus 152 Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~-~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v 224 (321)
T 2pk3_A 152 YGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL-G------FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFT 224 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCT-T------SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC-C------chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeE
Confidence 999999999999876 348999999999999988743 1 112233333333 5 3445667888899999
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+++|+|++++.++... .. +++||++++ .++|+.|+++.+.+.+|..
T Consensus 225 ~v~Dva~a~~~~~~~~--~~---g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 270 (321)
T 2pk3_A 225 DVRDIVQAYWLLSQYG--KT---GDVYNVCSG--IGTRIQDVLDLLLAMANVK 270 (321)
T ss_dssp EHHHHHHHHHHHHHHC--CT---TCEEEESCS--CEEEHHHHHHHHHHHSSSC
T ss_pred EHHHHHHHHHHHHhCC--CC---CCeEEeCCC--CCeeHHHHHHHHHHHhCCC
Confidence 9999999999998753 22 789999998 8999999999999998864
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-32 Score=271.48 Aligned_cols=264 Identities=14% Similarity=0.153 Sum_probs=196.4
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++++|+|||||||||||++|+++|++.|+ +|++++|+......... .+ . ...++
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~---~~-~------------------~~~~~ 59 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA---TVKGYSLTAPTVPSLFE---TA-R------------------VADGM 59 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCSSSSCHHH---HT-T------------------TTTTS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC---eEEEEeCCCcccchhhH---hh-c------------------cCCce
Confidence 578899999999999999999999999996 56999997654321110 00 0 02578
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNK--LDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
.++.+|++ +.+.+..++++ +|+|||+||.... .+.+...+++|+.|+.+++++|++++++++|||+||
T Consensus 60 ~~~~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 60 QSEIGDIR-------DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp EEEECCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred EEEEcccc-------CHHHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 89999999 55555566665 8999999996432 245677899999999999999998744889999999
Q ss_pred ceeeccccc--ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 163 AFVWGEESG--MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 163 ~~v~~~~~~--~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
..+||.... .+.|+. +..+.+.|+.|
T Consensus 133 ~~vyg~~~~~~~~~E~~----------------------------------------------------~~~~~~~Y~~s 160 (357)
T 1rkx_A 133 DKCYDNKEWIWGYRENE----------------------------------------------------AMGGYDPYSNS 160 (357)
T ss_dssp GGGBCCCCSSSCBCTTS----------------------------------------------------CBCCSSHHHHH
T ss_pred HHHhCCCCcCCCCCCCC----------------------------------------------------CCCCCCccHHH
Confidence 999986532 222221 11456899999
Q ss_pred HHHHHHHHHHhc-----------CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 241 KVMGEMFIEHLK-----------ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 241 K~~aE~~v~~~~-----------~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
|+.+|++++.+. .+++++++||+.|||+...+.. .....++..+..|....+ ++++..+++|
T Consensus 161 K~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~------~~~~~~~~~~~~g~~~~~-~~~~~~~~~v 233 (357)
T 1rkx_A 161 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD------RIVPDILRAFEQSQPVII-RNPHAIRPWQ 233 (357)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS------CHHHHHHHHHHTTCCEEC-SCTTCEECCE
T ss_pred HHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccc------cHHHHHHHHHhcCCCEEE-CCCCCeeccE
Confidence 999999998762 2899999999999998753211 233455556666665433 4567889999
Q ss_pred ehhhhhhHHHHHHHhhh-cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 310 PADMVVNAIVVAVVAHA-KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~-~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
||+|+|++++.++.... ..... +++||++++...++|+.|+++.+.+.+|..+
T Consensus 234 ~v~Dva~a~~~~~~~~~~~~~~~-~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~ 287 (357)
T 1rkx_A 234 HVLEPLSGYLLLAQKLYTDGAEY-AEGWNFGPNDADATPVKNIVEQMVKYWGEGA 287 (357)
T ss_dssp ETHHHHHHHHHHHHHHHHTCGGG-CSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred eHHHHHHHHHHHHHhhhhcCCCC-CceEEECCCCCCcccHHHHHHHHHHHhCCCC
Confidence 99999999999887421 10011 6799999752268999999999999998653
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=264.37 Aligned_cols=257 Identities=19% Similarity=0.253 Sum_probs=191.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|+ +|+++.|...... +. +..+++++.+
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~-------------------------~~~~~~~~~~ 51 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGL---SVVVVDNLQTGHE--DA-------------------------ITEGAKFYNG 51 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCG--GG-------------------------SCTTSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCCCcCch--hh-------------------------cCCCcEEEEC
Confidence 6899999999999999999999986 5688888654321 00 1136789999
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+.+..+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++. ++++|||+||..+|+
T Consensus 52 D~~-------~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~ 123 (330)
T 2c20_A 52 DLR-------DKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYG 123 (330)
T ss_dssp CTT-------CHHHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGC
T ss_pred CCC-------CHHHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeC
Confidence 999 5555667777 899999999976542 456778999999999999999987 789999999999998
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
...+ .++|+.. ..+.+.|+.||+.+|+
T Consensus 124 ~~~~~~~~E~~~----------------------------------------------------~~~~~~Y~~sK~~~e~ 151 (330)
T 2c20_A 124 EVDVDLITEETM----------------------------------------------------TNPTNTYGETKLAIEK 151 (330)
T ss_dssp SCSSSSBCTTSC----------------------------------------------------CCCSSHHHHHHHHHHH
T ss_pred CCCCCCCCcCCC----------------------------------------------------CCCCChHHHHHHHHHH
Confidence 6431 2333321 1356899999999999
Q ss_pred HHHHh--cCCCcEEEEeCCceecCCCCCCCccccC-cCchHHHHHhccC--ceeeEEec------CCCcccceeehhhhh
Q 037479 247 FIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEG-IRTIDSLAVGYGK--GRLTCFLG------DVKGIVDVIPADMVV 315 (492)
Q Consensus 247 ~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~-~~~~~~~~~~~~~--g~~~~~~~------~~~~~~d~v~vddva 315 (492)
+++.+ ..+++++++||+.|||+......|.... .......+..... +....+++ +++..+++|||+|+|
T Consensus 152 ~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva 231 (330)
T 2c20_A 152 MLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLV 231 (330)
T ss_dssp HHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHH
T ss_pred HHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHH
Confidence 99876 3489999999999999975322221111 1222223333222 22334455 677889999999999
Q ss_pred hHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 316 NAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 316 ~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
++++.++........ +++||++++ .++|+.|+++.+.+.+|...
T Consensus 232 ~a~~~~~~~~~~~~~--~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 275 (330)
T 2c20_A 232 AAHFLGLKDLQNGGE--SDFYNLGNG--NGFSVKEIVDAVREVTNHEI 275 (330)
T ss_dssp HHHHHHHHHHHTTCC--CEEEECCCT--TCBCHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHhccccCCC--CCeEEeCCC--CCccHHHHHHHHHHHhCCCC
Confidence 999999875432211 689999998 89999999999999998653
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=270.58 Aligned_cols=254 Identities=16% Similarity=0.081 Sum_probs=197.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|||||||||||++|+++|++.|+ +|++++|+....... ...+++++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~---------------------------~~~~v~~~ 77 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH---YVIASDWKKNEHMTE---------------------------DMFCDEFH 77 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCSSSCG---------------------------GGTCSEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC---eEEEEECCCccchhh---------------------------ccCCceEE
Confidence 468999999999999999999999986 568999976542210 02568899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF----DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
.+|++ +.+.+..+++++|+|||+||.... .+.+...+++|+.|+.+++++|++. ++++|||+||..+|
T Consensus 78 ~~Dl~-------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~ 149 (379)
T 2c5a_A 78 LVDLR-------VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIY 149 (379)
T ss_dssp ECCTT-------SHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGS
T ss_pred ECCCC-------CHHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehhee
Confidence 99999 556566888999999999997653 3557788999999999999999987 78899999999999
Q ss_pred ccccc------ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 167 GEESG------MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 167 ~~~~~------~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
+...+ .++|+... +..+.+.|+.|
T Consensus 150 ~~~~~~~~~~~~~~E~~~~--------------------------------------------------~~~~~~~Y~~s 179 (379)
T 2c5a_A 150 PEFKQLETTNVSLKESDAW--------------------------------------------------PAEPQDAFGLE 179 (379)
T ss_dssp CGGGSSSSSSCEECGGGGS--------------------------------------------------SBCCSSHHHHH
T ss_pred CCCCCCCccCCCcCcccCC--------------------------------------------------CCCCCChhHHH
Confidence 86431 13332210 11456899999
Q ss_pred HHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee-eEEecCCCcccceeehhhhhhH
Q 037479 241 KVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL-TCFLGDVKGIVDVIPADMVVNA 317 (492)
Q Consensus 241 K~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~v~vddva~~ 317 (492)
|+.+|++++.+ ..+++++++||+.|||+...+..++. .....++..+..|.. ..+++++...+++||++|+|++
T Consensus 180 K~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 256 (379)
T 2c5a_A 180 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGRE---KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 256 (379)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCC---CHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccc---cHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHH
Confidence 99999999876 34899999999999999875432221 123445555545543 4567888889999999999999
Q ss_pred HHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 318 IVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 318 ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
++.++... . +++||++++ .++|+.|+++.+.+.+|...
T Consensus 257 i~~~l~~~---~---~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 294 (379)
T 2c5a_A 257 VLRLTKSD---F---REPVNIGSD--EMVSMNEMAEMVLSFEEKKL 294 (379)
T ss_dssp HHHHHHSS---C---CSCEEECCC--CCEEHHHHHHHHHHTTTCCC
T ss_pred HHHHhhcc---C---CCeEEeCCC--CccCHHHHHHHHHHHhCCCC
Confidence 99998742 1 678999998 89999999999999998754
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=266.34 Aligned_cols=255 Identities=22% Similarity=0.322 Sum_probs=195.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh-CCCC--CeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 13 KTILVTGATGFLAKIFVEKILRV-QPNV--KKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~-g~~V--~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|+|||||||||||++|+++|++. ++.+ .+|+++.|....... +++. ++. ...++.+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~-~~~~-~~~-------------------~~~~~~~ 59 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLA-PVD-------------------ADPRLRF 59 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGG-GGT-------------------TCTTEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch-hhhh-hcc-------------------cCCCeEE
Confidence 58999999999999999999996 3221 367899986532211 1110 000 0257899
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+.+|++ +.+.+..++.++|+|||+||..... +.+...+++|+.|+.+++++|++. ++++|||+||..+|
T Consensus 60 ~~~Dl~-------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vy 131 (337)
T 1r6d_A 60 VHGDIR-------DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVY 131 (337)
T ss_dssp EECCTT-------CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGG
T ss_pred EEcCCC-------CHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHh
Confidence 999999 5555667889999999999976532 345678999999999999999997 78899999999999
Q ss_pred cccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
|... ..++|+. +..+.+.|+.||+.+|
T Consensus 132 g~~~~~~~~E~~----------------------------------------------------~~~~~~~Y~~sK~~~e 159 (337)
T 1r6d_A 132 GSIDSGSWTESS----------------------------------------------------PLEPNSPYAASKAGSD 159 (337)
T ss_dssp CCCSSSCBCTTS----------------------------------------------------CCCCCSHHHHHHHHHH
T ss_pred CCCCCCCCCCCC----------------------------------------------------CCCCCCchHHHHHHHH
Confidence 8642 1223321 1145689999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
++++.+ ..+++++++||+.|||+...+ . .....++..+..|....++++++...++++++|+|++++.++.
T Consensus 160 ~~~~~~~~~~g~~~~ilrp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 232 (337)
T 1r6d_A 160 LVARAYHRTYGLDVRITRCCNNYGPYQHP-E------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLA 232 (337)
T ss_dssp HHHHHHHHHHCCCEEEEEECEEECTTCCT-T------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEeeeeECCCCCC-C------ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHh
Confidence 999876 348999999999999988643 1 1233455556666655667888889999999999999999887
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
.. .. +++||++++ .++|+.|+++.+.+.+|..
T Consensus 233 ~~--~~---g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 233 GG--RA---GEIYHIGGG--LELTNRELTGILLDSLGAD 264 (337)
T ss_dssp HC--CT---TCEEEECCC--CEEEHHHHHHHHHHHHTCC
T ss_pred CC--CC---CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 42 22 789999998 8999999999999999875
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-32 Score=268.05 Aligned_cols=242 Identities=18% Similarity=0.179 Sum_probs=182.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
..|+|||||||||||++|+++|++.|+ +|++++|+..... .+. ..+++++
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~---~l~------------------------~~~~~~~ 61 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGH---DLVLIHRPSSQIQ---RLA------------------------YLEPECR 61 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECTTSCGG---GGG------------------------GGCCEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEecChHhhh---hhc------------------------cCCeEEE
Confidence 457999999999999999999999986 5689999764321 110 1368899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
.+|++ +.+.+..+++++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||..+++..
T Consensus 62 ~~Dl~-------d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~ 133 (342)
T 2x4g_A 62 VAEML-------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRH 133 (342)
T ss_dssp ECCTT-------CHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCC
T ss_pred EecCC-------CHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcC
Confidence 99999 5566668889999999999976532 456778999999999999999997 78999999999999865
Q ss_pred cc--ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC----CchHHHHHHH
Q 037479 170 SG--MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW----PNTYVFTKVM 243 (492)
Q Consensus 170 ~~--~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~n~Y~~sK~~ 243 (492)
.+ ..+|+..+ .+ .+.|+.||+.
T Consensus 134 ~~~~~~~E~~~~----------------------------------------------------~p~~~~~~~Y~~sK~~ 161 (342)
T 2x4g_A 134 PQGLPGHEGLFY----------------------------------------------------DSLPSGKSSYVLCKWA 161 (342)
T ss_dssp TTSSCBCTTCCC----------------------------------------------------SSCCTTSCHHHHHHHH
T ss_pred CCCCCCCCCCCC----------------------------------------------------CccccccChHHHHHHH
Confidence 42 22232111 23 6799999999
Q ss_pred HHHHHHHhc-CCCcEEEEeCCceecCCC-CCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHH
Q 037479 244 GEMFIEHLK-ENMSVAIVRPTIITGTYK-EPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVA 321 (492)
Q Consensus 244 aE~~v~~~~-~~~~~~ivRPs~v~g~~~-~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~ 321 (492)
+|++++.+. .+++++++||+.|||+.. .+ + ...++..+..|....+ ++...++++++|+|++++.+
T Consensus 162 ~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~--~-------~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~ 229 (342)
T 2x4g_A 162 LDEQAREQARNGLPVVIGIPGMVLGELDIGP--T-------TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMA 229 (342)
T ss_dssp HHHHHHHHHHTTCCEEEEEECEEECSCCSSC--S-------TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCcEEEEeCCceECCCCccc--c-------HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHH
Confidence 999998862 389999999999999876 21 1 2244444555554333 56778999999999999999
Q ss_pred HHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 322 VVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 322 ~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+.+.. . +++||++++ . +|+.|+++.+.+.+|..
T Consensus 230 ~~~~~--~---g~~~~v~~~--~-~s~~e~~~~i~~~~g~~ 262 (342)
T 2x4g_A 230 LERGR--I---GERYLLTGH--N-LEMADLTRRIAELLGQP 262 (342)
T ss_dssp HHHSC--T---TCEEEECCE--E-EEHHHHHHHHHHHHTCC
T ss_pred HhCCC--C---CceEEEcCC--c-ccHHHHHHHHHHHhCCC
Confidence 87532 1 679999998 6 99999999999999865
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-32 Score=271.54 Aligned_cols=263 Identities=16% Similarity=0.166 Sum_probs=194.7
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhC-CCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQ-PNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g-~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.+++|+|||||||||||++|+++|++.| + +|++++|+..... +.+. ...++
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~--~~l~-----------------------~~~~v 80 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVN---QVHVVDNLLSAEK--INVP-----------------------DHPAV 80 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCS---EEEEECCCTTCCG--GGSC-----------------------CCTTE
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCc---eEEEEECCCCCch--hhcc-----------------------CCCce
Confidence 4678999999999999999999999998 6 5689998754321 0000 02578
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
+++.+|++ +.+.+..+++++|+|||+||..... +++...+++|+.|+.+++++|++..++++|||+||..
T Consensus 81 ~~~~~Dl~-------d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~ 153 (377)
T 2q1s_A 81 RFSETSIT-------DDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGC 153 (377)
T ss_dssp EEECSCTT-------CHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-
T ss_pred EEEECCCC-------CHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHH
Confidence 99999999 5566668888999999999986543 3567889999999999999998864678999999999
Q ss_pred eeccccc-cee--ccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC-CCCchHHHH
Q 037479 165 VWGEESG-MLY--ESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY-GWPNTYVFT 240 (492)
Q Consensus 165 v~~~~~~-~i~--E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~n~Y~~s 240 (492)
+||...+ .++ |..+. .+. .+.+.|+.|
T Consensus 154 vyg~~~~~~~~~~E~~~~-------------------------------------------------~~~~~~~~~Y~~s 184 (377)
T 2q1s_A 154 SIAEKTFDDAKATEETDI-------------------------------------------------VSLHNNDSPYSMS 184 (377)
T ss_dssp -------------CCCCC-------------------------------------------------CCSSCCCSHHHHH
T ss_pred HcCCCCCCCcCccccccc-------------------------------------------------ccccCCCCchHHH
Confidence 9986532 233 33210 001 346789999
Q ss_pred HHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCc-cccC-----cCchHHHHHhccCceeeEEecCCCcccceeehh
Q 037479 241 KVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPG-WAEG-----IRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPAD 312 (492)
Q Consensus 241 K~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~g-w~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vd 312 (492)
|+.+|++++.+ ..+++++++||+.|||+...+..| |... ......++..+..|....++++++..+++|+|+
T Consensus 185 K~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~ 264 (377)
T 2q1s_A 185 KIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVE 264 (377)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHH
Confidence 99999999876 348999999999999987632221 2111 123445666666776656678888999999999
Q ss_pred hhhhH-HHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 313 MVVNA-IVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 313 dva~~-ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
|+|++ ++.++... . . + +||++++ .++|+.|+++.+.+.+|..+
T Consensus 265 Dva~a~i~~~~~~~-~-~---g-~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 308 (377)
T 2q1s_A 265 DVANGLIACAADGT-P-G---G-VYNIASG--KETSIADLATKINEITGNNT 308 (377)
T ss_dssp HHHHHHHHHHHHCC-T-T---E-EEECCCC--CCEEHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHhcC-C-C---C-eEEecCC--CceeHHHHHHHHHHHhCCCC
Confidence 99999 88888742 1 1 7 9999998 89999999999999998754
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-31 Score=263.19 Aligned_cols=263 Identities=19% Similarity=0.180 Sum_probs=190.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC-------cCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA-------KSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~-------~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
+|+|||||||||||++|+++|++.|++ |+++.|.... ....+++. .. ..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~r~~~~~~~~~~~l~-------------~~--------~~ 57 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYL---PVVIDNFHNAFRGGGSLPESLRRVQ-------------EL--------TG 57 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCC---EEEEECSSSSCBCSSSSBHHHHHHH-------------HH--------HT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecCCcccccccccHHHHHHHH-------------hc--------cC
Confidence 579999999999999999999999965 5888886543 11111111 10 12
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.++.++.+|++ +.+.+..+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++. ++++|||
T Consensus 58 ~~~~~~~~D~~-------~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~ 129 (348)
T 1ek6_A 58 RSVEFEEMDIL-------DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVF 129 (348)
T ss_dssp CCCEEEECCTT-------CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEE
T ss_pred CceEEEECCCC-------CHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence 57889999999 5555567777 899999999976532 456778999999999999999987 7889999
Q ss_pred eeeceeecccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC-CchH
Q 037479 160 VSTAFVWGEES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW-PNTY 237 (492)
Q Consensus 160 vST~~v~~~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~Y 237 (492)
+||..+|+... ..++|+.. ..+ .+.|
T Consensus 130 ~SS~~~~g~~~~~~~~E~~~----------------------------------------------------~~p~~~~Y 157 (348)
T 1ek6_A 130 SSSATVYGNPQYLPLDEAHP----------------------------------------------------TGGCTNPY 157 (348)
T ss_dssp EEEGGGGCSCSSSSBCTTSC----------------------------------------------------CCCCSSHH
T ss_pred ECcHHHhCCCCCCCcCCCCC----------------------------------------------------CCCCCCch
Confidence 99999998643 12333211 123 6799
Q ss_pred HHHHHHHHHHHHHhc---CCCcEEEEeCCceecCCCCCCCccccC--cCchHHHHHhc-c-CceeeEEec------CCCc
Q 037479 238 VFTKVMGEMFIEHLK---ENMSVAIVRPTIITGTYKEPFPGWAEG--IRTIDSLAVGY-G-KGRLTCFLG------DVKG 304 (492)
Q Consensus 238 ~~sK~~aE~~v~~~~---~~~~~~ivRPs~v~g~~~~p~~gw~~~--~~~~~~~~~~~-~-~g~~~~~~~------~~~~ 304 (492)
+.||+.+|++++.+. .+++++++||+.|||+......|.... .......+... . .+....+++ +++.
T Consensus 158 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 237 (348)
T 1ek6_A 158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237 (348)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCce
Confidence 999999999998762 349999999999999864222111110 01222222222 2 344334555 5678
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
.+++|||+|+|++++.++.......+ +++||++++ .++|+.|+++.+.+.+|..
T Consensus 238 ~~~~i~v~Dva~a~~~~~~~~~~~~g--~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 291 (348)
T 1ek6_A 238 VRDYIHVVDLAKGHIAALRKLKEQCG--CRIYNLGTG--TGYSVLQMVQAMEKASGKK 291 (348)
T ss_dssp EECEEEHHHHHHHHHHHHHHHTTTCC--EEEEEECCS--CCEEHHHHHHHHHHHHCSC
T ss_pred EEeeEEHHHHHHHHHHHHhcccccCC--ceEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 89999999999999999875321221 389999998 8899999999999999865
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-31 Score=265.78 Aligned_cols=258 Identities=20% Similarity=0.288 Sum_probs=194.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|+. .+|+++.|+...... +.+. .....++.++.+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~-~~~~---------------------~~~~~~~~~~~~ 61 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPD-VHVTVLDKLTYAGNK-ANLE---------------------AILGDRVELVVG 61 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGTG---------------------GGCSSSEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCC-CEEEEEeCCCCCCCh-hHHh---------------------hhccCCeEEEEC
Confidence 79999999999999999999999322 266899996532211 1110 011257899999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
|++ +.+.+..+++++|+|||+||..... +.+...+++|+.|+.+++++|++. ++ +|||+||..+||..
T Consensus 62 Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~ 132 (348)
T 1oc2_A 62 DIA-------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDL 132 (348)
T ss_dssp CTT-------CHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCB
T ss_pred CCC-------CHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCC
Confidence 999 5566668889999999999986532 345778999999999999999987 56 99999999999864
Q ss_pred ccc-----e---eccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHH
Q 037479 170 SGM-----L---YESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241 (492)
Q Consensus 170 ~~~-----i---~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK 241 (492)
... . ++.++.+. .+..+.+.|+.||
T Consensus 133 ~~~~~~~~~~~~~~~~~~E~-----------------------------------------------~~~~~~~~Y~~sK 165 (348)
T 1oc2_A 133 PLREDLPGHGEGPGEKFTAE-----------------------------------------------TNYNPSSPYSSTK 165 (348)
T ss_dssp CCGGGSTTTTCSTTSSBCTT-----------------------------------------------SCCCCCSHHHHHH
T ss_pred cccccccccccccCCCcCCC-----------------------------------------------CCCCCCCccHHHH
Confidence 210 0 00111110 1124568999999
Q ss_pred HHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHH
Q 037479 242 VMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 242 ~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii 319 (492)
+.+|++++.+ ..+++++++||+.|||+...+ . .....++..+..|....+++++....++++++|+|++++
T Consensus 166 ~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 238 (348)
T 1oc2_A 166 AASDLIVKAWVRSFGVKATISNCSNNYGPYQHI-E------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW 238 (348)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT-T------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc-c------chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHH
Confidence 9999999876 348999999999999988643 1 123344555556665567788888999999999999999
Q ss_pred HHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.++... .. +++||++++ .++|+.|+++.+.+.+|...
T Consensus 239 ~~~~~~--~~---g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 275 (348)
T 1oc2_A 239 AILTKG--RM---GETYLIGAD--GEKNNKEVLELILEKMGQPK 275 (348)
T ss_dssp HHHHHC--CT---TCEEEECCS--CEEEHHHHHHHHHHHTTCCT
T ss_pred HHhhCC--CC---CCeEEeCCC--CCCCHHHHHHHHHHHhCCCc
Confidence 998742 22 789999998 89999999999999998753
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=283.00 Aligned_cols=298 Identities=22% Similarity=0.280 Sum_probs=205.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC-CeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV-KKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V-~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.++|+|||||||||||++|+++|++.++ + .+|++++|++......+++.+ .+.......+.. +......++.
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~-~g~~V~~l~R~~~~~~~~~~l~~-~~~~~~~~~~~~-----~~~~~~~~v~ 143 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLD-VDGRLICLVRAESDEDARRRLEK-TFDSGDPELLRH-----FKELAADRLE 143 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSC-TTCEEEEEECSSSHHHHHHHHHG-GGCSSCHHHHHH-----HHHHHTTTEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCC-CCCEEEEEECCCCcHHHHHHHHH-HHHhcchhhhhh-----hhhhccCceE
Confidence 4689999999999999999999999832 1 477999999877666666663 332211110000 0111237899
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
++.+|++++++|++.++ ...+++++|+|||+||.+++ .++...+++|+.||.+++++|++. ++++|||+||.++++.
T Consensus 144 ~v~~Dl~~~~~gld~~~-~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v~~~ 220 (478)
T 4dqv_A 144 VVAGDKSEPDLGLDQPM-WRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAA 220 (478)
T ss_dssp EEECCTTSGGGGCCHHH-HHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGGGTT
T ss_pred EEEeECCCcccCCCHHH-HHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhhcCc
Confidence 99999999999996655 45788899999999999887 566678999999999999999987 7899999999999876
Q ss_pred ccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 169 ESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 169 ~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
... .+.|+... . ....++.....+.+.|+.||+.+|++
T Consensus 221 ~~~~~~~E~~~~-------------~----------------------------p~~~~~~~~~~~~~~Y~~sK~~~E~~ 259 (478)
T 4dqv_A 221 IEPSAFTEDADI-------------R----------------------------VISPTRTVDGGWAGGYGTSKWAGEVL 259 (478)
T ss_dssp SCTTTCCSSSCH-------------H----------------------------HHCCEEECCTTSEECHHHHHHHHHHH
T ss_pred cCCCCcCCcccc-------------c----------------------------ccCcccccccccccchHHHHHHHHHH
Confidence 432 22222100 0 00000111123457899999999999
Q ss_pred HHHhc--CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHh-ccCceeeE-EecC------CCcccceeehhhhhhH
Q 037479 248 IEHLK--ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVG-YGKGRLTC-FLGD------VKGIVDVIPADMVVNA 317 (492)
Q Consensus 248 v~~~~--~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~-~~~g~~~~-~~~~------~~~~~d~v~vddva~~ 317 (492)
++++. .+++++++||+.|||+.... |.......+..++.. ...|..+. +++. ++..+++|||||||++
T Consensus 260 ~~~~~~~~gi~~~ivRpg~v~G~~~~~--g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~a 337 (478)
T 4dqv_A 260 LREANDLCALPVAVFRCGMILADTSYA--GQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEA 337 (478)
T ss_dssp HHHHHHHHCCCEEEEEECEEECCSSSS--SCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHH
T ss_pred HHHHHHHhCCCeEEEECceeeCCCccC--CcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHH
Confidence 99873 48999999999999985411 100001122233322 22344322 2222 2678899999999999
Q ss_pred HHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 318 IVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 318 ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
++.++..........+++||++++..+++||.|+++.+.++ +.
T Consensus 338 i~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~ 380 (478)
T 4dqv_A 338 IAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GY 380 (478)
T ss_dssp HHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TC
T ss_pred HHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CC
Confidence 99998742111111178999999843349999999999885 54
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-31 Score=273.28 Aligned_cols=283 Identities=13% Similarity=0.110 Sum_probs=195.1
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC--------------HHHHHHHHhhcChhhHHH
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS--------------ATVRFHNEIIGKDLFRVL 71 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~--------------~~~r~~~~~~~~~~f~~l 71 (492)
...+.++++|||||||||||++|+++|++.|+ +|+++.|...... ..+++. .+
T Consensus 5 ~~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~----------~~ 71 (404)
T 1i24_A 5 HHHHHHGSRVMVIGGDGYCGWATALHLSKKNY---EVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS----------RW 71 (404)
T ss_dssp -------CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHH----------HH
T ss_pred cccccCCCeEEEeCCCcHHHHHHHHHHHhCCC---eEEEEEecCccccccccccccccccchhhhhhh----------hH
Confidence 34567899999999999999999999999996 5588877432110 001111 00
Q ss_pred HHhcCCchhhhccCceEEEecCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hh---HHHHHHHhHHHHHH
Q 037479 72 KEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ER---YDVALDLNTFGAKH 143 (492)
Q Consensus 72 ~~~~~~~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~---~~~~~~~Nv~gt~~ 143 (492)
.. ....++.++.+|++ +.+.+..++++ +|+|||+||..... .. +...+++|+.||.+
T Consensus 72 ~~--------~~~~~v~~~~~Dl~-------d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ 136 (404)
T 1i24_A 72 KA--------LTGKSIELYVGDIC-------DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLN 136 (404)
T ss_dssp HH--------HHCCCCEEEESCTT-------SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hh--------ccCCceEEEECCCC-------CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHH
Confidence 00 01257889999999 55555577776 99999999976432 11 23478999999999
Q ss_pred HHHHHHhcccc-eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhh
Q 037479 144 VLNFSKKCAKL-IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKD 222 (492)
Q Consensus 144 ll~~a~~~~~~-~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (492)
++++|++. ++ ++|||+||..+||.....++|..+++.+....
T Consensus 137 ll~a~~~~-~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~------------------------------------ 179 (404)
T 1i24_A 137 VLFAIKEF-GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRT------------------------------------ 179 (404)
T ss_dssp HHHHHHHH-CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEE------------------------------------
T ss_pred HHHHHHHh-CCCcEEEEeCcHHHhCCCCCCCCcccccccccccc------------------------------------
Confidence 99999987 55 59999999999987654555543321100000
Q ss_pred hhccccccCCCCchHHHHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCC---CCccccCc-------CchHHHHHhc
Q 037479 223 LGIKRAKIYGWPNTYVFTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEP---FPGWAEGI-------RTIDSLAVGY 290 (492)
Q Consensus 223 ~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p---~~gw~~~~-------~~~~~~~~~~ 290 (492)
-....+..+.+.|+.||+.+|++++.+ ..+++++++||+.|||+...+ .++|+... ..+..++..+
T Consensus 180 --~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (404)
T 1i24_A 180 --DTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQA 257 (404)
T ss_dssp --EEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHH
T ss_pred --ccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHH
Confidence 000001246689999999999998876 248999999999999998643 12222211 2345666666
Q ss_pred cCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCC--cEEEecCCCCCcccHHHHHHHHHHH---hhcC
Q 037479 291 GKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVN--NIYQVGSSLRNPLIYTNLQDYAYRY---FTKK 362 (492)
Q Consensus 291 ~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~--~iy~i~~~~~~~~t~~e~~~~~~~~---~~~~ 362 (492)
..|....+++++...+++|||+|||++++.++.... .. + ++||+++ .++|+.|+++.+.+. +|..
T Consensus 258 ~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~-~~---g~~~~yni~~---~~~s~~e~~~~i~~~~~~~g~~ 327 (404)
T 1i24_A 258 AVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA-KA---GEFRVFNQFT---EQFSVNELASLVTKAGSKLGLD 327 (404)
T ss_dssp HHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC-CT---TCEEEEEECS---EEEEHHHHHHHHHHHHHTTTCC
T ss_pred HcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc-cC---CCceEEEECC---CCCcHHHHHHHHHHHHHhhCCC
Confidence 677766677889999999999999999999987422 12 4 7999986 479999999999998 5543
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-32 Score=262.33 Aligned_cols=235 Identities=15% Similarity=0.076 Sum_probs=180.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|+||||| +||||++|+++|++.|++ |++++|+.... ..++.+
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~---V~~~~r~~~~~-------------------------------~~~~~~ 45 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQGHE---VTGLRRSAQPM-------------------------------PAGVQT 45 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTTCC---EEEEECTTSCC-------------------------------CTTCCE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCCCE---EEEEeCCcccc-------------------------------ccCCce
Confidence 4578999999 599999999999999975 58999975431 256889
Q ss_pred EecCCCCCCCCCCchhhHHHhccC-ccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNK-LDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~-vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
+.+|+++ .+.+..++++ +|+|||+||... ......+++|+.|+.+++++|++. ++++|||+||+.+||.
T Consensus 46 ~~~Dl~d-------~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~ 115 (286)
T 3gpi_A 46 LIADVTR-------PDTLASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQ 115 (286)
T ss_dssp EECCTTC-------GGGCTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCC
T ss_pred EEccCCC-------hHHHHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcC
Confidence 9999994 4444466666 999999999753 445677899999999999999986 7899999999999987
Q ss_pred ccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 169 ESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 169 ~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
..+ .++|+.. ..+.+.|+.||+.+|++
T Consensus 116 ~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~~E~~ 143 (286)
T 3gpi_A 116 EVEEWLDEDTP----------------------------------------------------PIAKDFSGKRMLEAEAL 143 (286)
T ss_dssp CCSSEECTTSC----------------------------------------------------CCCCSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCC----------------------------------------------------CCCCChhhHHHHHHHHH
Confidence 543 2333321 14678999999999999
Q ss_pred HHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhc
Q 037479 248 IEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAK 327 (492)
Q Consensus 248 v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~ 327 (492)
.++ ++++++||+.|||+... .++..+.. ....++++...++|+++|+|++++.++.....
T Consensus 144 -~~~---~~~~ilR~~~v~G~~~~-------------~~~~~~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~ 203 (286)
T 3gpi_A 144 -LAA---YSSTILRFSGIYGPGRL-------------RMIRQAQT---PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSH 203 (286)
T ss_dssp -GGG---SSEEEEEECEEEBTTBC-------------HHHHHTTC---GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTT
T ss_pred -Hhc---CCeEEEecccccCCCch-------------hHHHHHHh---cccCCCcCceeEEEEHHHHHHHHHHHHhhhcc
Confidence 664 99999999999998763 12223332 12236778889999999999999999985321
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCCC
Q 037479 328 QPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWI 365 (492)
Q Consensus 328 ~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~~ 365 (492)
... +++||++++ .++|+.|+++.+.+.+|..+..
T Consensus 204 ~~~--~~~~~~~~~--~~~s~~e~~~~i~~~~g~~~~~ 237 (286)
T 3gpi_A 204 AVP--ERLYIVTDN--QPLPVHDLLRWLADRQGIAYPA 237 (286)
T ss_dssp SCC--CSEEEECCS--CCEEHHHHHHHHHHHTTCCCCC
T ss_pred CCC--CceEEEeCC--CCCCHHHHHHHHHHHcCCCCCC
Confidence 111 789999998 8999999999999999976533
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-31 Score=265.61 Aligned_cols=265 Identities=20% Similarity=0.229 Sum_probs=196.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
|+|||||||||||++++++|++. |+ +|++++|+..... . +. ...++.++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~---~----~~-------------------~~~~~~~~~ 51 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY---EVYGLDIGSDAIS---R----FL-------------------NHPHFHFVE 51 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC---EEEEEESCCGGGG---G----GT-------------------TCTTEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC---EEEEEeCCcchHH---H----hh-------------------cCCCeEEEe
Confidence 58999999999999999999997 75 5689999753211 0 00 025789999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
+|++++ .+..+.+++++|+|||+||.... .......+++|+.|+.+++++|++. + ++|||+||+.+|+.
T Consensus 52 ~D~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~ 123 (345)
T 2bll_A 52 GDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGM 123 (345)
T ss_dssp CCTTTC------SHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBT
T ss_pred ccccCc------HHHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCC
Confidence 999942 34455677899999999997653 2456778999999999999999987 5 89999999999986
Q ss_pred ccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 169 ESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 169 ~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
..+ .++|+..+... .+ ...+.+.|+.||+.+|++
T Consensus 124 ~~~~~~~e~~~~~~~-----~~----------------------------------------~~~~~~~Y~~sK~~~e~~ 158 (345)
T 2bll_A 124 CSDKYFDEDHSNLIV-----GP----------------------------------------VNKPRWIYSVSKQLLDRV 158 (345)
T ss_dssp CCCSSBCTTTCCCBC-----CC----------------------------------------TTCGGGHHHHHHHHHHHH
T ss_pred CCCCCcCCccccccc-----Cc----------------------------------------ccCcccccHHHHHHHHHH
Confidence 532 33443221000 00 002456899999999999
Q ss_pred HHHh--cCCCcEEEEeCCceecCCCCCCCccccC-cCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 248 IEHL--KENMSVAIVRPTIITGTYKEPFPGWAEG-IRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 248 v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
++.+ ..+++++++||+.|||+...+...+..+ ......++..+..|....++++++..+++|+++|+|++++.++..
T Consensus 159 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 238 (345)
T 2bll_A 159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN 238 (345)
T ss_dssp HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhh
Confidence 9876 3489999999999999987542211111 122345555666676666778888899999999999999999875
Q ss_pred hhcCCCCCCcEEEecCCCCC-cccHHHHHHHHHHHhhcCC
Q 037479 325 HAKQPSDVNNIYQVGSSLRN-PLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~-~~t~~e~~~~~~~~~~~~p 363 (492)
...... +++||++++ . ++|+.|+++.+.+.+|..+
T Consensus 239 ~~~~~~--g~~~~i~~~--~~~~s~~e~~~~i~~~~g~~~ 274 (345)
T 2bll_A 239 AGNRCD--GEIINIGNP--ENEASIEELGEMLLASFEKHP 274 (345)
T ss_dssp GGGTTT--TEEEEECCT--TSEEEHHHHHHHHHHHHHTCT
T ss_pred ccccCC--CceEEeCCC--CCCCCHHHHHHHHHHHhCCCc
Confidence 322111 789999987 5 8999999999999998764
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7e-31 Score=266.59 Aligned_cols=272 Identities=14% Similarity=0.167 Sum_probs=192.1
Q ss_pred CCEEEEeCCcchhhHHHHHHHH-hhCCCCCeEEEEEecCCCcC------HHHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 12 NKTILVTGATGFLAKIFVEKIL-RVQPNVKKLYLLLRAADAKS------ATVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll-~~g~~V~~i~~lvR~~~~~~------~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
+|+|||||||||||++|+++|+ +.|+ +|+++.|...... ..+.+... + ++.... ...
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~---~~~ 65 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNH---SVVIVDSLVGTHGKSDHVETRENVARK---------L-QQSDGP---KPP 65 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCC---EEEEEECCTTTTTCCTTSCCHHHHHHH---------H-HHSCSS---CCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCC---EEEEEecCCcccccccccchHHHHHHH---------H-HHhhcc---ccc
Confidence 5799999999999999999999 9886 5688988754320 01222100 0 000000 000
Q ss_pred Cc---eEEEecCCCCCCCCCCchhhHHHhcc--C-ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccce
Q 037479 85 EK---ITLVPGDITREDLGVKDSNLREEMWN--K-LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLI 155 (492)
Q Consensus 85 ~~---v~~v~gDl~~~~lgl~~~~~~~~~~~--~-vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~ 155 (492)
.+ +.++.+|++ +.+.+..+++ + +|+|||+||..... +.+...+++|+.|+.+++++|++. +++
T Consensus 66 ~~~~~~~~~~~Dl~-------d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~ 137 (397)
T 1gy8_A 66 WADRYAALEVGDVR-------NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCD 137 (397)
T ss_dssp TTTCCCEEEESCTT-------CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred cCCceEEEEECCCC-------CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCC
Confidence 23 889999999 5555556666 5 99999999987542 456788999999999999999987 788
Q ss_pred eEEEeeeceeecccc--------cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 156 VLVHVSTAFVWGEES--------GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 156 ~~V~vST~~v~~~~~--------~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
+|||+||+.+++... ..++|+.
T Consensus 138 ~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~-------------------------------------------------- 167 (397)
T 1gy8_A 138 KIIFSSSAAIFGNPTMGSVSTNAEPIDINA-------------------------------------------------- 167 (397)
T ss_dssp EEEEEEEGGGTBSCCC-----CCCCBCTTS--------------------------------------------------
T ss_pred EEEEECCHHHhCCCCcccccccccCcCccC--------------------------------------------------
Confidence 999999999997643 1122211
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCcccc-CcCchHHHHH-----hccCcee----
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAE-GIRTIDSLAV-----GYGKGRL---- 295 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~-~~~~~~~~~~-----~~~~g~~---- 295 (492)
+..+.+.|+.||+.+|++++.+ ..+++++++||+.|||+......|... ........+. .+..|..
T Consensus 168 --~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (397)
T 1gy8_A 168 --KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIH 245 (397)
T ss_dssp --CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC------
T ss_pred --CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccc
Confidence 1135689999999999999876 238999999999999997643322221 1122223333 4444432
Q ss_pred --------eEEec------CCCcccceeehhhhhhHHHHHHHhhhcCC--CCCC---cEEEecCCCCCcccHHHHHHHHH
Q 037479 296 --------TCFLG------DVKGIVDVIPADMVVNAIVVAVVAHAKQP--SDVN---NIYQVGSSLRNPLIYTNLQDYAY 356 (492)
Q Consensus 296 --------~~~~~------~~~~~~d~v~vddva~~ii~~~~~~~~~~--~~~~---~iy~i~~~~~~~~t~~e~~~~~~ 356 (492)
..+++ +++..+++|||+|||++++.++....... +. + ++||++++ .++|+.|+++.+.
T Consensus 246 ~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~~~ni~~~--~~~s~~e~~~~i~ 322 (397)
T 1gy8_A 246 EDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDK-SKYFSVFNLGTS--RGYSVREVIEVAR 322 (397)
T ss_dssp -----CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTG-GGSEEEEEESCS--CCEEHHHHHHHHH
T ss_pred cccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccc-cCCCcEEEeCCC--CcccHHHHHHHHH
Confidence 34555 67888999999999999999987533211 00 3 79999998 8999999999999
Q ss_pred HHhhcC
Q 037479 357 RYFTKK 362 (492)
Q Consensus 357 ~~~~~~ 362 (492)
+.+|..
T Consensus 323 ~~~g~~ 328 (397)
T 1gy8_A 323 KTTGHP 328 (397)
T ss_dssp HHHCCC
T ss_pred HHhCCC
Confidence 999864
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-31 Score=265.37 Aligned_cols=274 Identities=17% Similarity=0.217 Sum_probs=193.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|+ +|+++.|...... .+.+. . +.. ..++.++.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-~~~~~-~---------l~~----------~~~~~~~~~ 57 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI---DLIVFDNLSRKGA-TDNLH-W---------LSS----------LGNFEFVHG 57 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSTTH-HHHHH-H---------HHT----------TCCCEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC---EEEEEeCCCccCc-hhhhh-h---------hcc----------CCceEEEEc
Confidence 6899999999999999999999996 5688888542211 11111 0 100 145889999
Q ss_pred CCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccce-eEEEeeeceee
Q 037479 93 DITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLI-VLVHVSTAFVW 166 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~V~vST~~v~ 166 (492)
|++ +.+.++.++++ +|+|||+||....+ +.+...+++|+.|+.+++++|++. +++ +|||+||.++|
T Consensus 58 Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~ 129 (347)
T 1orr_A 58 DIR-------NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVY 129 (347)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGG
T ss_pred CCC-------CHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHh
Confidence 999 55556677777 99999999976542 456788999999999999999987 565 89999999999
Q ss_pred ccccc-ceeccc--cCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 167 GEESG-MLYESS--FKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 167 ~~~~~-~i~E~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
+...+ ...|.. +...... .+ ++...+..+.+.|+.||+.
T Consensus 130 g~~~~~~~~e~~~~~~~~~~~---~~-----------------------------------~~e~~~~~~~~~Y~~sK~~ 171 (347)
T 1orr_A 130 GDLEQYKYNETETRYTCVDKP---NG-----------------------------------YDESTQLDFHSPYGCSKGA 171 (347)
T ss_dssp TTCTTSCEEECSSCEEETTCT---TC-----------------------------------BCTTSCCCCCHHHHHHHHH
T ss_pred CCCCcCCcccccccccccccc---cC-----------------------------------ccccCCCCCCCchHHHHHH
Confidence 86432 122210 0000000 00 0000112466899999999
Q ss_pred HHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCce-----eeEEecCCCcccceeehhhhhh
Q 037479 244 GEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGR-----LTCFLGDVKGIVDVIPADMVVN 316 (492)
Q Consensus 244 aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~d~v~vddva~ 316 (492)
+|++++.+ ..+++++++||+.|||+...+.. +. .....++..+..|. ....+++++..+++|+++|+|+
T Consensus 172 ~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ 247 (347)
T 1orr_A 172 ADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY---DQ-GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMIS 247 (347)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTCCCBT---TB-CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEEccCceeCcCCCCCC---cC-cHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHH
Confidence 99999886 34899999999999998764321 00 11233444444444 3456788999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 317 AIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 317 ~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++.++....... +++||++++..+++|+.|+++.+.+.+|..+
T Consensus 248 a~~~~~~~~~~~~---g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~ 291 (347)
T 1orr_A 248 LYFTALANVSKIR---GNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 291 (347)
T ss_dssp HHHHHHHTHHHHT---TCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhccccCC---CCEEEeCCCCCCCccHHHHHHHHHHHhCCCC
Confidence 9999987422122 7799999983236999999999999998754
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-31 Score=262.80 Aligned_cols=256 Identities=17% Similarity=0.145 Sum_probs=193.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+|+|||||||||||++|+++|++.|+ +|++++|+...... .++. .+. ...++.++
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~-~~~-------------------~~~~~~~~ 68 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGY---RVHGLVARRSSDTR-WRLR-ELG-------------------IEGDIQYE 68 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCC-HHHH-HTT-------------------CGGGEEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCCccccc-cchh-hcc-------------------ccCceEEE
Confidence 368999999999999999999999986 56999997654221 1111 000 02578899
Q ss_pred ecCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccc-eeEEEeeece
Q 037479 91 PGDITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKL-IVLVHVSTAF 164 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~-~~~V~vST~~ 164 (492)
.+|++ +.+.+..++++ +|+|||+||..... +.+...+++|+.|+.+++++|++. ++ ++|||+||.+
T Consensus 69 ~~Dl~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~ 140 (335)
T 1rpn_A 69 DGDMA-------DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSE 140 (335)
T ss_dssp ECCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGG
T ss_pred ECCCC-------CHHHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHH
Confidence 99999 55555566664 69999999976542 456788999999999999999987 64 8999999999
Q ss_pred eeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 165 VWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 165 v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
+|+...+ .++|+.. ..+.+.|+.||+.
T Consensus 141 v~g~~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~ 168 (335)
T 1rpn_A 141 MFGLIQAERQDENTP----------------------------------------------------FYPRSPYGVAKLY 168 (335)
T ss_dssp GGCSCSSSSBCTTSC----------------------------------------------------CCCCSHHHHHHHH
T ss_pred HhCCCCCCCCCcccC----------------------------------------------------CCCCChhHHHHHH
Confidence 9986542 3333321 1456899999999
Q ss_pred HHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceee-EEecCCCcccceeehhhhhhHHHH
Q 037479 244 GEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLT-CFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 244 aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
+|++++.+ ..+++++++||+.+||+...+ ++.. .....++..+..|... ...++++..+++|||+|+|++++.
T Consensus 169 ~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~ 244 (335)
T 1rpn_A 169 GHWITVNYRESFGLHASSGILFNHESPLRGI--EFVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWL 244 (335)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeeCcccCCCCCC--Ccch--HHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHH
Confidence 99999876 348999999999999987632 1111 1133444455556532 356888999999999999999999
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
++... . +++||++++ .++|+.|+++.+.+.+|..
T Consensus 245 ~~~~~-~-----~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 245 MLQQD-K-----ADDYVVATG--VTTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp HHHSS-S-----CCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred HHhcC-C-----CCEEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 98742 1 468999998 8999999999999998864
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=260.13 Aligned_cols=249 Identities=16% Similarity=0.121 Sum_probs=187.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhh--CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRV--QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~--g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+|+|||||||||||++|+++|++. |+ +|+++.|+..... +. +++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~~----~~-------------------------~~~~~ 49 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTE---NVIASDIRKLNTD----VV-------------------------NSGPF 49 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGG---GEEEEESCCCSCH----HH-------------------------HSSCE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCC---EEEEEcCCCcccc----cc-------------------------CCCce
Confidence 478999999999999999999998 76 4588988754421 11 34678
Q ss_pred EecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 90 VPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD--ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
+.+|++ +.+.+..+++ ++|+|||+||..... ......+++|+.|+.+++++|++. ++++|||+||..+
T Consensus 50 ~~~D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~ 121 (312)
T 2yy7_A 50 EVVNAL-------DFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAV 121 (312)
T ss_dssp EECCTT-------CHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGG
T ss_pred EEecCC-------CHHHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHH
Confidence 899999 5555667777 899999999976432 456778999999999999999987 7889999999999
Q ss_pred eccccc--ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 166 WGEESG--MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 166 ~~~~~~--~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
|+...+ .++|.. +..+.+.|+.||+.
T Consensus 122 ~~~~~~~~~~~e~~----------------------------------------------------~~~~~~~Y~~sK~~ 149 (312)
T 2yy7_A 122 FGPTTPKENTPQYT----------------------------------------------------IMEPSTVYGISKQA 149 (312)
T ss_dssp CCTTSCSSSBCSSC----------------------------------------------------BCCCCSHHHHHHHH
T ss_pred hCCCCCCCCccccC----------------------------------------------------cCCCCchhHHHHHH
Confidence 986431 222221 11457899999999
Q ss_pred HHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHh-ccCceeeEEecCCCcccceeehhhhhhHHHH
Q 037479 244 GEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVG-YGKGRLTCFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 244 aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
+|++++.+ ..+++++++||+.|||+...|..+.. ......+.. +..|. ...+++++..+++|||+|+|++++.
T Consensus 150 ~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~ 225 (312)
T 2yy7_A 150 GERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTT---DYAVDIFYKAIADKK-YECFLSSETKMPMMYMDDAIDATIN 225 (312)
T ss_dssp HHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTT---THHHHHHHHHHHTSE-EEESSCTTCCEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchh---hhHHHHHHHHHcCCC-eEEecCCCceeeeeeHHHHHHHHHH
Confidence 99999876 34899999999999998765422110 112233333 33444 3456788889999999999999999
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
++......... +++||+++ .++|+.|+++.+.+.++
T Consensus 226 ~~~~~~~~~~~-~~~~ni~~---~~~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 226 IMKAPVEKIKI-HSSYNLAA---MSFTPTEIANEIKKHIP 261 (312)
T ss_dssp HHHSCGGGCCC-SSCEECCS---EEECHHHHHHHHHTTCT
T ss_pred HHhCccccccc-CceEEeCC---CccCHHHHHHHHHHHCC
Confidence 98753321111 47999985 58999999999998877
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-31 Score=262.30 Aligned_cols=254 Identities=19% Similarity=0.263 Sum_probs=192.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
|+|||||||||||++|+++|++. |+ +|+++.|....... +.+. ++ . ...++.++.
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~-~~~~-~~-----------------~--~~~~~~~~~ 56 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQD---TVVNIDKLTYAGNL-ESLS-DI-----------------S--ESNRYNFEH 56 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSC---EEEEEECCCTTCCG-GGGT-TT-----------------T--TCTTEEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCC---eEEEEecCCCCCch-hhhh-hh-----------------h--cCCCeEEEE
Confidence 57999999999999999999998 54 56888886532111 1110 00 0 025789999
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcc-cce-------eEE
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCA-KLI-------VLV 158 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~-------~~V 158 (492)
+|++ +.+.+..+++ ++|+|||+||....+ +.+...+++|+.|+.+++++|.+.. +++ +||
T Consensus 57 ~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv 129 (361)
T 1kew_A 57 ADIC-------DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFH 129 (361)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEE
T ss_pred CCCC-------CHHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEE
Confidence 9999 5555667777 899999999986532 4567789999999999999998752 455 999
Q ss_pred Eeeeceeeccccc-----------ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 159 HVSTAFVWGEESG-----------MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 159 ~vST~~v~~~~~~-----------~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
|+||..+||.... .++|+.
T Consensus 130 ~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~-------------------------------------------------- 159 (361)
T 1kew_A 130 HISTDEVYGDLPHPDEVENSVTLPLFTETT-------------------------------------------------- 159 (361)
T ss_dssp EEEEGGGGCCCCCGGGSCTTSCCCCBCTTS--------------------------------------------------
T ss_pred EeCCHHHhCCCcccccccccccCCCCCCCC--------------------------------------------------
Confidence 9999999986431 111111
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
+..+.+.|+.||+.+|++++.+ ..+++++++||+.|||+...+. .....++..+..|....+++++...
T Consensus 160 --~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (361)
T 1kew_A 160 --AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-------KLIPLVILNALEGKPLPIYGKGDQI 230 (361)
T ss_dssp --CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-------SHHHHHHHHHHHTCCEEEETTSCCE
T ss_pred --CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-------cHHHHHHHHHHcCCCceEcCCCcee
Confidence 1245689999999999999876 3489999999999999986431 1233455555556555667888889
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.++++++|+|++++.++... .. +++||++++ .++|+.|+++.+.+.+|...
T Consensus 231 ~~~i~v~Dva~a~~~~~~~~--~~---g~~~~v~~~--~~~s~~e~~~~i~~~~g~~~ 281 (361)
T 1kew_A 231 RDWLYVEDHARALHMVVTEG--KA---GETYNIGGH--NEKKNLDVVFTICDLLDEIV 281 (361)
T ss_dssp EEEEEHHHHHHHHHHHHHHC--CT---TCEEEECCC--CEEEHHHHHHHHHHHHHHHS
T ss_pred EeeEEHHHHHHHHHHHHhCC--CC---CCEEEecCC--CeeeHHHHHHHHHHHhCCcC
Confidence 99999999999999998742 22 789999998 89999999999999998753
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-31 Score=262.47 Aligned_cols=250 Identities=13% Similarity=0.206 Sum_probs=189.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhC-CCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQ-PNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g-~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++|+|||||||||||++|+++|++.| ++ |+++.|+..... .+. ..++.
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~-~~~--------------------------~~~~~ 93 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTK-FVN--------------------------LVDLN 93 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCC---EEEEECCSSGGG-GGG--------------------------TTTSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcE---EEEEecCCCcch-hhc--------------------------ccCce
Confidence 467899999999999999999999998 54 588888654321 000 01223
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-----CccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-----KLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-----~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.+...+++|+.|+.+++++|++. ++ +|||+||
T Consensus 94 -~~~d~~-------~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS 163 (357)
T 2x6t_A 94 -IADYMD-------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASS 163 (357)
T ss_dssp -CSEEEE-------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEE
T ss_pred -EeeecC-------cHHHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcc
Confidence 678888 5555656665 59999999997654 3457788999999999999999987 67 9999999
Q ss_pred ceeeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHH
Q 037479 163 AFVWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241 (492)
Q Consensus 163 ~~v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK 241 (492)
..+|+...+ .++|+.. ..+.+.|+.||
T Consensus 164 ~~v~g~~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK 191 (357)
T 2x6t_A 164 AATYGGRTSDFIESREY----------------------------------------------------EKPLNVFGYSK 191 (357)
T ss_dssp GGGGCSCSSCCCSSGGG----------------------------------------------------CCCSSHHHHHH
T ss_pred hHHhCCCCCCCcCCcCC----------------------------------------------------CCCCChhHHHH
Confidence 999986432 3333321 14568999999
Q ss_pred HHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc-ccceeehhhhhhHH
Q 037479 242 VMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG-IVDVIPADMVVNAI 318 (492)
Q Consensus 242 ~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~d~v~vddva~~i 318 (492)
+.+|++++.+ ..+++++++||+.|||+...+.. ... .....++..+..|....+++++.. ..++++++|+|+++
T Consensus 192 ~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai 268 (357)
T 2x6t_A 192 FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKG-SMA--SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVN 268 (357)
T ss_dssp HHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCG-GGS--CHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCc-ccc--hHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHH
Confidence 9999999887 34799999999999999764311 111 223445555666665566778888 89999999999999
Q ss_pred HHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 319 VVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 319 i~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+.++.... +++||++++ .++|+.|+++.+.+.+|..
T Consensus 269 ~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 269 LWFLENGV------SGIFNLGTG--RAESFQAVADATLAYHKKG 304 (357)
T ss_dssp HHHHHHCC------CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred HHHHhcCC------CCeEEecCC--CcccHHHHHHHHHHHcCCC
Confidence 99987432 579999998 8999999999999999875
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-32 Score=264.59 Aligned_cols=244 Identities=19% Similarity=0.162 Sum_probs=182.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH-HHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA-TVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~-~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+.+|+|||||||||||++|+++|++.|++ |++++|+...... .+.+. .+ ....++.
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~-~~-------------------~~~~~~~ 61 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEE---VTVLDDLRVPPMIPPEGTG-KF-------------------LEKPVLE 61 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCC---EEEECCCSSCCSSCCTTSS-EE-------------------ECSCGGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCE---EEEEecCCcccccchhhhh-hh-------------------ccCCCee
Confidence 35789999999999999999999999974 5899997652100 00000 00 0012233
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
++.+|++ ++|+|||+||..... ......++ |+.|+.+++++|++. ++++|||+||.++
T Consensus 62 ~~~~Dl~-----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v 122 (321)
T 3vps_A 62 LEERDLS-----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEV 122 (321)
T ss_dssp CCHHHHT-----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGG
T ss_pred EEeCccc-----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHH
Confidence 3333322 799999999987532 23344566 999999999999998 6899999999999
Q ss_pred eccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 166 WGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 166 ~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
|+...+ .++|+.. ..+.+.|+.||+.+
T Consensus 123 ~~~~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~~ 150 (321)
T 3vps_A 123 YGQADTLPTPEDSP----------------------------------------------------LSPRSPYAASKVGL 150 (321)
T ss_dssp GCSCSSSSBCTTSC----------------------------------------------------CCCCSHHHHHHHHH
T ss_pred hCCCCCCCCCCCCC----------------------------------------------------CCCCChhHHHHHHH
Confidence 987542 3333321 14678999999999
Q ss_pred HHHHHHh--cCCC-cEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHH
Q 037479 245 EMFIEHL--KENM-SVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVA 321 (492)
Q Consensus 245 E~~v~~~--~~~~-~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~ 321 (492)
|++++.+ ..++ +++++||+.|||+...+ . .....++..+..|....++++++..+++|+++|+|++++.+
T Consensus 151 E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~ 223 (321)
T 3vps_A 151 EMVAGAHQRASVAPEVGIVRFFNVYGPGERP-D------ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL 223 (321)
T ss_dssp HHHHHHHHHSSSSCEEEEEEECEEECTTCCT-T------SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHG
T ss_pred HHHHHHHHHHcCCCceEEEEeccccCcCCCC-C------ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHH
Confidence 9999987 4588 99999999999988744 1 23445666666777767889999999999999999999998
Q ss_pred HHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 322 VVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 322 ~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+.... . + +||++++ .++|+.|+++.+. .+|..+
T Consensus 224 ~~~~~--~---g-~~~i~~~--~~~s~~e~~~~i~-~~g~~~ 256 (321)
T 3vps_A 224 ANRPL--P---S-VVNFGSG--QSLSVNDVIRILQ-ATSPAA 256 (321)
T ss_dssp GGSCC--C---S-EEEESCS--CCEEHHHHHHHHH-TTCTTC
T ss_pred HhcCC--C---C-eEEecCC--CcccHHHHHHHHH-HhCCCC
Confidence 87422 1 6 9999998 8999999999999 888754
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-31 Score=258.03 Aligned_cols=248 Identities=13% Similarity=0.135 Sum_probs=184.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|+|||||||||||++|+++|++.|++ |+++.|+.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~---v~~~~r~~---------------------------------------- 37 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDV---ELVLRTRD---------------------------------------- 37 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTE---EEECCCTT----------------------------------------
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCe---EEEEecCc----------------------------------------
Confidence 35689999999999999999999999864 46665531
Q ss_pred EecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec
Q 037479 90 VPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNF----DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA 163 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~ 163 (492)
.+|++ +.+.+..+++ ++|+|||+||.... ..+....+++|+.|+.+++++|++. ++++|||+||.
T Consensus 38 -~~D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~ 108 (321)
T 1e6u_A 38 -ELNLL-------DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSS 108 (321)
T ss_dssp -TCCTT-------CHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred -cCCcc-------CHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccH
Confidence 26777 5555667777 89999999998753 2456778999999999999999997 78899999999
Q ss_pred eeecccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC-CchHHHHH
Q 037479 164 FVWGEES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW-PNTYVFTK 241 (492)
Q Consensus 164 ~v~~~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~Y~~sK 241 (492)
.+|+... ..++|...... +..+ .+.|+.||
T Consensus 109 ~vyg~~~~~~~~E~~~~~~------------------------------------------------~~~p~~~~Y~~sK 140 (321)
T 1e6u_A 109 CIYPKLAKQPMAESELLQG------------------------------------------------TLEPTNEPYAIAK 140 (321)
T ss_dssp GGSCTTCCSSBCGGGTTSS------------------------------------------------CCCGGGHHHHHHH
T ss_pred HHcCCCCCCCcCccccccC------------------------------------------------CCCCCCCccHHHH
Confidence 9998643 23444421100 0022 25899999
Q ss_pred HHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccC----c-eeeEEecCCCcccceeehhhh
Q 037479 242 VMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGK----G-RLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 242 ~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~----g-~~~~~~~~~~~~~d~v~vddv 314 (492)
+.+|++++.+ ..+++++++||+.|||+...+.... -.....++..+.. | ....++++++..+++|||+|+
T Consensus 141 ~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dv 217 (321)
T 1e6u_A 141 IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSN---SHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDM 217 (321)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTC---SSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCC---CccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHH
Confidence 9999999886 3489999999999999887432110 0122344444432 3 334567888999999999999
Q ss_pred hhHHHHHHHhhhcC-----CCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 315 VNAIVVAVVAHAKQ-----PSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 315 a~~ii~~~~~~~~~-----~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
|++++.++.+.... ... +++||++++ .++|+.|+++.+.+.+|...
T Consensus 218 a~~~~~~~~~~~~~~~~~~~~~-~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 268 (321)
T 1e6u_A 218 AAASIHVMELAHEVWLENTQPM-LSHINVGTG--VDCTIRELAQTIAKVVGYKG 268 (321)
T ss_dssp HHHHHHHHHSCHHHHHHTSBTT-BCCEEESCS--CCEEHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHhCcccccccccccC-CceEEeCCC--CCccHHHHHHHHHHHhCCCC
Confidence 99999998753221 001 479999998 89999999999999998653
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=256.96 Aligned_cols=255 Identities=17% Similarity=0.190 Sum_probs=191.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|||||||||||++|+++|++.|+ +|+++.|....... .+. .+. ...++.+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~--~~~-~~~-------------------~~~~~~~ 79 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGH---EVTVVDNFFTGRKR--NVE-HWI-------------------GHENFEL 79 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCGG--GTG-GGT-------------------TCTTEEE
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCC---EEEEEeCCCccchh--hhh-hhc-------------------cCCceEE
Confidence 5679999999999999999999999986 56899986543211 100 000 0256889
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+.+|+.++ .+.++|+|||+||.... ...+...+++|+.|+.+++++|++. ++ +|||+||..+|
T Consensus 80 ~~~D~~~~------------~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 145 (343)
T 2b69_A 80 INHDVVEP------------LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVY 145 (343)
T ss_dssp EECCTTSC------------CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGG
T ss_pred EeCccCCh------------hhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHh
Confidence 99999843 13579999999997653 2356778999999999999999987 55 89999999999
Q ss_pred cccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
|... ..++|..+.+.+ +..+.+.|+.||+.+|
T Consensus 146 g~~~~~~~~E~~~~~~~-----------------------------------------------~~~~~~~Y~~sK~~~E 178 (343)
T 2b69_A 146 GDPEVHPQSEDYWGHVN-----------------------------------------------PIGPRACYDEGKRVAE 178 (343)
T ss_dssp BSCSSSSBCTTCCCBCC-----------------------------------------------SSSTTHHHHHHHHHHH
T ss_pred CCCCCCCCcccccccCC-----------------------------------------------CCCCCCchHHHHHHHH
Confidence 8643 234444322100 1135678999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
++++.+ ..+++++++||+.|||+...+..+ .....++..+..|....++++++..+++|+|+|+|++++.++.
T Consensus 179 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~ 253 (343)
T 2b69_A 179 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN 253 (343)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTCCTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCcEEEEEEcceeCcCCCCCcc-----cHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHh
Confidence 999876 358999999999999987643211 2234455555566665677888899999999999999998876
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.. . +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 254 ~~---~---~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 285 (343)
T 2b69_A 254 SN---V---SSPVNLGNP--EEHTILEFAQLIKNLVGSGS 285 (343)
T ss_dssp SS---C---CSCEEESCC--CEEEHHHHHHHHHHHHTCCC
T ss_pred cC---C---CCeEEecCC--CCCcHHHHHHHHHHHhCCCC
Confidence 32 1 578999998 89999999999999998754
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=255.18 Aligned_cols=248 Identities=20% Similarity=0.229 Sum_probs=188.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++++++|++.|+ +|+++.|...... +. ...++.++.+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~--~~-------------------------~~~~~~~~~~ 50 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGL---EVAVLDNLATGKR--EN-------------------------VPKGVPFFRV 50 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC---EEEEECCCSSCCG--GG-------------------------SCTTCCEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCC---EEEEEECCCcCch--hh-------------------------cccCeEEEEC
Confidence 5899999999999999999999996 4578887543211 00 1145678899
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec-eee
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA-FVW 166 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~-~v~ 166 (492)
|++ +.+.+..+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++. ++++|||+||. .+|
T Consensus 51 Dl~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~ 122 (311)
T 2p5y_A 51 DLR-------DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIY 122 (311)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHH
T ss_pred CCC-------CHHHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhc
Confidence 999 5555556666 899999999976532 456778999999999999999987 78899999998 888
Q ss_pred cc-cc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 167 GE-ES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 167 ~~-~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
|. .. ..++|+.. ..+.+.|+.||+.+
T Consensus 123 g~~~~~~~~~E~~~----------------------------------------------------~~~~~~Y~~sK~~~ 150 (311)
T 2p5y_A 123 GEVPEGERAEETWP----------------------------------------------------PRPKSPYAASKAAF 150 (311)
T ss_dssp CCCCTTCCBCTTSC----------------------------------------------------CCCCSHHHHHHHHH
T ss_pred CCCCCCCCcCCCCC----------------------------------------------------CCCCChHHHHHHHH
Confidence 75 21 12233211 13567999999999
Q ss_pred HHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEe-----cCCCcccceeehhhhhhH
Q 037479 245 EMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFL-----GDVKGIVDVIPADMVVNA 317 (492)
Q Consensus 245 E~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~d~v~vddva~~ 317 (492)
|++++.+ ..+++++++||+.|||+...+... -.....++..+..|....++ +++....++++++|+|++
T Consensus 151 e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 226 (311)
T 2p5y_A 151 EHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGE----AGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEA 226 (311)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCSSST----THHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeeccccCcCCCCCCc----CcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHH
Confidence 9999876 358999999999999997643110 01123344444456555556 788888999999999999
Q ss_pred HHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 318 IVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 318 ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
++.++... +++||++++ .++|+.|+++.+.+.+|...
T Consensus 227 ~~~~~~~~-------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 263 (311)
T 2p5y_A 227 HALALFSL-------EGIYNVGTG--EGHTTREVLMAVAEAAGKAP 263 (311)
T ss_dssp HHHHHHHC-------CEEEEESCS--CCEEHHHHHHHHHHHHTCCC
T ss_pred HHHHHhCC-------CCEEEeCCC--CCccHHHHHHHHHHHhCCCC
Confidence 99988741 579999998 89999999999999998653
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=270.54 Aligned_cols=272 Identities=21% Similarity=0.230 Sum_probs=187.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+|+|||||||||||++|+++|++.|+ +|++++|+.......+++.+.+... | +.........++.++
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~l~~~l~~~--~-------~~~~~~~~~~~v~~v 135 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSH---RIYCFIRADNEEIAWYKLMTNLNDY--F-------SEETVEMMLSNIEVI 135 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEE---EEEEEEECSSHHHHHHHHHHHHHHH--S-------CHHHHHHHHTTEEEE
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCC---EEEEEECCCChHHHHHHHHHHHHHh--c-------cccccccccCceEEE
Confidence 357999999999999999999998885 6799999887555556655322110 0 000011123789999
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.||++++ +.+. ...++|+|||+||......++...+++|+.|+.+++++|++ ++++|||+||.++ |...
T Consensus 136 ~~Dl~d~-------~~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~ 204 (427)
T 4f6c_A 136 VGDFECM-------DDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYF 204 (427)
T ss_dssp EECC----------CCCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEE
T ss_pred eCCCCCc-------ccCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCc
Confidence 9999962 2222 55799999999999887777888999999999999999998 6789999999998 5421
Q ss_pred c-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 171 G-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 171 ~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
. .-.+.++.+.+.. ....+.+.|+.||+.+|++++
T Consensus 205 ~~~~~~~~~~E~~~~--------------------------------------------~~~~~~~~Y~~sK~~~E~~~~ 240 (427)
T 4f6c_A 205 DIDTEDVTFSEADVY--------------------------------------------KGQLLTSPYTRSKFYSELKVL 240 (427)
T ss_dssp CSSCSCCEECTTCSC--------------------------------------------SSCCCCSHHHHHHHHHHHHHH
T ss_pred cCCCCCccccccccc--------------------------------------------cCCCCCCchHHHHHHHHHHHH
Confidence 1 0111222221110 011467899999999999999
Q ss_pred Hh-cCCCcEEEEeCCceecCCCCCCCccccCc--CchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 250 HL-KENMSVAIVRPTIITGTYKEPFPGWAEGI--RTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 250 ~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
++ ..+++++++||+.|+|+...+. |..+. .....++..+..+.... .++++..++++||||+|++++.++....
T Consensus 241 ~~~~~g~~~~ivRpg~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~DvA~ai~~~~~~~~ 317 (427)
T 4f6c_A 241 EAVNNGLDGRIVRVGNLTSPYNGRW--HMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNT 317 (427)
T ss_dssp HHHHTTCCEEEEEECCEESCSSSCC--CCTTGGGCHHHHHHHHHHHSSEEE-HHHHTCEECCEEHHHHHHHHHHHTTSCC
T ss_pred HHHHcCCCEEEEeCCeeecCCCCCc--cccCcchHHHHHHHHHHHhcCCCC-CccccceEEEeeHHHHHHHHHHHHcCCC
Confidence 87 4689999999999999987431 11111 12334444444333211 2346788999999999999999887432
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
. +++||++++ .+++|.|+++.+.+ ++
T Consensus 318 --~---g~~~~l~~~--~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 318 --P---QIIYHVLSP--NKMPVKSLLECVKR-KE 343 (427)
T ss_dssp --C---CSEEEESCS--CCEEHHHHHHHHHS-SC
T ss_pred --C---CCEEEecCC--CCCcHHHHHHHHHH-cC
Confidence 2 889999998 89999999999987 45
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-31 Score=256.39 Aligned_cols=246 Identities=13% Similarity=0.207 Sum_probs=174.4
Q ss_pred EEEEeCCcchhhHHHHHHHHhhC-CCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 14 TILVTGATGFLAKIFVEKILRVQ-PNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g-~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
+|||||||||||++|+++|++.| ++ |+++.|+..... .+.+ .++. +.+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~-~~~~--------------------------~~~~-~~~ 49 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTK-FVNL--------------------------VDLN-IAD 49 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCC---EEEEECCSSGGG-GHHH--------------------------HTSC-CSE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcE---EEEEccCCCCch-hhhc--------------------------Ccce-ecc
Confidence 58999999999999999999998 54 588888754321 1111 1122 678
Q ss_pred CCCCCCCCCCchhhHHHhccC-----ccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 93 DITREDLGVKDSNLREEMWNK-----LDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~-----vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
|++ +.+..+.++++ +|+|||+||.... .......+++|+.|+.+++++|++. ++ +|||+||..+|
T Consensus 50 d~~-------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 120 (310)
T 1eq2_A 50 YMD-------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATY 120 (310)
T ss_dssp EEE-------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGG
T ss_pred ccc-------cHHHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHh
Confidence 888 55556667664 9999999997754 3457788999999999999999987 67 99999999999
Q ss_pred ccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
+...+ .++|+.. ..+.+.|+.||+.+|
T Consensus 121 g~~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~~e 148 (310)
T 1eq2_A 121 GGRTSDFIESREY----------------------------------------------------EKPLNVYGYSKFLFD 148 (310)
T ss_dssp TTCCSCBCSSGGG----------------------------------------------------CCCSSHHHHHHHHHH
T ss_pred CCCCCCCCCCCCC----------------------------------------------------CCCCChhHHHHHHHH
Confidence 86542 3333321 145789999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc-ccceeehhhhhhHHHHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG-IVDVIPADMVVNAIVVAV 322 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~d~v~vddva~~ii~~~ 322 (492)
++++++ ..+++++++||+.|||+...+.... ......++..+..|....++++++. .+++||++|+|++++.++
T Consensus 149 ~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~ 225 (310)
T 1eq2_A 149 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSM---ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 225 (310)
T ss_dssp HHHHHHGGGCSSCEEEEEECEEESSSCGGGGGG---SCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCcEECcCCCCCCcc---chHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHH
Confidence 999887 3489999999999999876431100 0223445556666665556778888 899999999999999998
Q ss_pred HhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 323 VAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 323 ~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
.... +++||++++ .++|+.|+++.+.+.+|..
T Consensus 226 ~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 226 ENGV------SGIFNLGTG--RAESFQAVADATLAYHKKG 257 (310)
T ss_dssp HHCC------CEEEEESCS--CCBCHHHHHHHC-------
T ss_pred hcCC------CCeEEEeCC--CccCHHHHHHHHHHHcCCC
Confidence 7432 579999998 8899999999999988865
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=277.36 Aligned_cols=270 Identities=21% Similarity=0.241 Sum_probs=189.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|||||||||||++|+++|++.|+ +|++++|+.......+|+.+.+... | +.........+++++.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~l~~~l~~~--~-------~~~~~~~~~~~v~~v~ 217 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSH---RIYCFIRADNEEIAWYKLMTNLNDY--F-------SEETVEMMLSNIEVIV 217 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEE---EEEEEEESSSHHHHHHHHHHHHHHH--S-------CHHHHHHHSTTEEEEE
T ss_pred CCeEEEECCccchHHHHHHHHHhcCC---EEEEEECCCChHHHHHHHHHHHHHh--c-------ccccchhccCceEEEe
Confidence 47999999999999999999988774 6799999887655566655322110 0 0000111247899999
Q ss_pred cCCCC-CCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 92 GDITR-EDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 92 gDl~~-~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
||+++ +.++ +..++|+|||+||.+++..++....++|+.||.+++++|++ +.++|||+||.++ |...
T Consensus 218 ~Dl~d~~~l~---------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~ 285 (508)
T 4f6l_B 218 GDFECMDDVV---------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYF 285 (508)
T ss_dssp EBTTBCSSCC---------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEE
T ss_pred cCCcccccCC---------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCC
Confidence 99996 3332 55799999999999988777888899999999999999998 5689999999999 5421
Q ss_pred c-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 171 G-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 171 ~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
+ ...+.++++.+.. ....+.+.|+.||+.+|++++
T Consensus 286 ~~~~~~~~~~E~~~~--------------------------------------------~~~~~~~~Y~~sK~~~E~~~~ 321 (508)
T 4f6l_B 286 DIDTEDVTFSEADVY--------------------------------------------KGQLLTSPYTRSKFYSELKVL 321 (508)
T ss_dssp CTTCSCCEECTTCSC--------------------------------------------SSBCCCSHHHHHHHHHHHHHH
T ss_pred ccCCcCccccccccc--------------------------------------------ccccCCCcHHHHHHHHHHHHH
Confidence 1 1112222221110 001367899999999999999
Q ss_pred Hh-cCCCcEEEEeCCceecCCCCCCCccccC--cCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 250 HL-KENMSVAIVRPTIITGTYKEPFPGWAEG--IRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 250 ~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
++ ..|++++|+||+.|+|+...+. +..+ ......++.....+.... .++++...+++||||+|++++.++....
T Consensus 322 ~~~~~gi~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~~v~v~DvA~ai~~~~~~~~ 398 (508)
T 4f6l_B 322 EAVNNGLDGRIVRVGNLTSPYNGRW--HMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDTTARQIVALAQVNT 398 (508)
T ss_dssp HHHHTTCEEEEEEECCEESCSSSCC--CCTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEECEEHHHHHHHHHHHTTBCC
T ss_pred HHHHcCCCEEEEecceeccCCCCCc--ccCCcchHHHHHHHHHHHHcCCCC-CCccCceEEEEcHHHHHHHHHHHHhCCC
Confidence 87 4699999999999999987431 1111 122345555555433321 2346788999999999999999987432
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHh
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYF 359 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~ 359 (492)
. +++||++++ ++++|.|+++.+.+..
T Consensus 399 --~---~~~~nl~~~--~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 399 --P---QIIYHVLSP--NKMPVKSLLECVKRKE 424 (508)
T ss_dssp --S---CSEEEESCS--CEEEHHHHHHHHHSSC
T ss_pred --C---CCEEEeCCC--CCCCHHHHHHHHHHcC
Confidence 2 789999999 8999999999998754
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=251.13 Aligned_cols=263 Identities=20% Similarity=0.224 Sum_probs=184.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC-cCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA-KSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~-~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
|+|||||||||||++++++|++.|+ +|+++.|.... ....+++. .. ...++.++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~~~~~~~~~~~~~~~-------------~~--------~~~~~~~~~ 56 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGH---DVIILDNLCNSKRSVLPVIE-------------RL--------GGKHPTFVE 56 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTTHHHHHH-------------HH--------HTSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCC---EEEEEecCCCcchhHHHHHH-------------hh--------cCCcceEEE
Confidence 5899999999999999999999996 45777775432 22222221 00 024678899
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+|++ +.+.+..+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+.+|
T Consensus 57 ~Dl~-------~~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~ 128 (338)
T 1udb_A 57 GDIR-------NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVY 128 (338)
T ss_dssp CCTT-------CHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred ccCC-------CHHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHh
Confidence 9999 5555556665 599999999975432 345678999999999999999887 78899999999999
Q ss_pred ccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
+.... .++|+... ..+.+.|+.||+.+|
T Consensus 129 g~~~~~~~~e~~~~---------------------------------------------------~~~~~~Y~~sK~~~e 157 (338)
T 1udb_A 129 GDNPKIPYVESFPT---------------------------------------------------GTPQSPYGKSKLMVE 157 (338)
T ss_dssp CSCCSSSBCTTSCC---------------------------------------------------CCCSSHHHHHHHHHH
T ss_pred CCCCCCCcCcccCC---------------------------------------------------CCCCChHHHHHHHHH
Confidence 75431 22222110 012579999999999
Q ss_pred HHHHHh--cC-CCcEEEEeCCceecCCCCCCCccccC--cCchHHHHHhcc--CceeeEEec------CCCcccceeehh
Q 037479 246 MFIEHL--KE-NMSVAIVRPTIITGTYKEPFPGWAEG--IRTIDSLAVGYG--KGRLTCFLG------DVKGIVDVIPAD 312 (492)
Q Consensus 246 ~~v~~~--~~-~~~~~ivRPs~v~g~~~~p~~gw~~~--~~~~~~~~~~~~--~g~~~~~~~------~~~~~~d~v~vd 312 (492)
++++.+ .. +++++++||+.|||+......|-... .......+.... .+....+.+ ++...+++|||+
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 237 (338)
T 1udb_A 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence 999876 23 79999999999999854222221110 012222333222 222223333 567788999999
Q ss_pred hhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 313 MVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 313 dva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
|+|++++.++.......+ +++||++++ .++|+.|+++.+.+.+|..
T Consensus 238 Dva~a~~~~l~~~~~~~~--~~~yni~~~--~~~s~~e~~~~i~~~~g~~ 283 (338)
T 1udb_A 238 DLADGHVVAMEKLANKPG--VHIYNLGAG--VGNSVLDVVNAFSKACGKP 283 (338)
T ss_dssp HHHHHHHHHHHHHTTCCE--EEEEEESCS--CCEEHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHhhhhccCC--CcEEEecCC--CceeHHHHHHHHHHHhCCC
Confidence 999999999874321221 379999998 8999999999999999864
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-30 Score=250.67 Aligned_cols=231 Identities=13% Similarity=0.085 Sum_probs=171.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|+++|++ |++++|++.. .. +..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~---V~~l~R~~~~---------------------------------~~---~~~ 41 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHE---VTLVSRKPGP---------------------------------GR---ITW 41 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCT---------------------------------TE---EEH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCc---------------------------------Ce---eec
Confidence 68999999999999999999999975 5889996432 11 111
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccC------cc-hhHHHHHHHhHHHHHHHHHHHHhcc-cceeEEEeeece
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTN------FD-ERYDVALDLNTFGAKHVLNFSKKCA-KLIVLVHVSTAF 164 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~------~~-~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~V~vST~~ 164 (492)
| +.....++++|+|||+|+..- ++ ......++.|+.+|+++++++++.+ +.+.||++||++
T Consensus 42 ~-----------~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~ 110 (298)
T 4b4o_A 42 D-----------ELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA 110 (298)
T ss_dssp H-----------HHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG
T ss_pred c-----------hhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee
Confidence 1 111245678999999998431 22 2345678999999999999999874 345699999999
Q ss_pred eeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 165 VWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 165 v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
+||...+ .++|+.. ..+.+.|..+|..
T Consensus 111 vyg~~~~~~~~E~~p----------------------------------------------------~~~~~~~~~~~~~ 138 (298)
T 4b4o_A 111 YYQPSLTAEYDEDSP----------------------------------------------------GGDFDFFSNLVTK 138 (298)
T ss_dssp GSCCCSSCCBCTTCC----------------------------------------------------CSCSSHHHHHHHH
T ss_pred eecCCCCCcccccCC----------------------------------------------------ccccchhHHHHHH
Confidence 9997643 2333321 1345678888888
Q ss_pred HHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 244 GEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 244 aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
.|........+++++++||+.|||+... ....++.....|.. ...+++++.+++|||||+|++++.++.
T Consensus 139 ~e~~~~~~~~~~~~~~~r~~~v~g~~~~----------~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~ 207 (298)
T 4b4o_A 139 WEAAARLPGDSTRQVVVRSGVVLGRGGG----------AMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALE 207 (298)
T ss_dssp HHHHHCCSSSSSEEEEEEECEEECTTSH----------HHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCceeeeeeeeEEcCCCC----------chhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHh
Confidence 8876544456899999999999998652 12233333334433 346899999999999999999999987
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+... .++||++++ +|+|+.|+++.+.+.+|++.
T Consensus 208 ~~~~-----~g~yn~~~~--~~~t~~e~~~~ia~~lgrp~ 240 (298)
T 4b4o_A 208 ANHV-----HGVLNGVAP--SSATNAEFAQTFGAALGRRA 240 (298)
T ss_dssp CTTC-----CEEEEESCS--CCCBHHHHHHHHHHHHTCCC
T ss_pred CCCC-----CCeEEEECC--CccCHHHHHHHHHHHhCcCC
Confidence 4321 569999999 99999999999999999754
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=256.43 Aligned_cols=242 Identities=19% Similarity=0.200 Sum_probs=184.1
Q ss_pred CCcccHHhhcCCCEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCch
Q 037479 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHL 79 (492)
Q Consensus 1 ~~~~~~~~~~~~~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~ 79 (492)
|.|+++.+++++|+|||||||||||++++++|++. |+ .+|+++.|+... .+.+. .+.+
T Consensus 10 ~~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r~~~~---~~~~~-------------~~~~--- 68 (344)
T 2gn4_A 10 MSMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSRDELK---QSEMA-------------MEFN--- 68 (344)
T ss_dssp ------CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEESCHHH---HHHHH-------------HHHC---
T ss_pred CCCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEECChhh---HHHHH-------------HHhc---
Confidence 46778899999999999999999999999999999 85 367899986421 11111 1110
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhccccee
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIV 156 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~ 156 (492)
..++.++.+|++ +.+.+..+++++|+|||+||.... ...+...+++|+.|+.+++++|.+. ++++
T Consensus 69 ----~~~v~~~~~Dl~-------d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~ 136 (344)
T 2gn4_A 69 ----DPRMRFFIGDVR-------DLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQ 136 (344)
T ss_dssp ----CTTEEEEECCTT-------CHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSE
T ss_pred ----CCCEEEEECCCC-------CHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCE
Confidence 257899999999 666667888999999999997653 2345678999999999999999998 7899
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
||++||..++ .+.+.
T Consensus 137 ~V~~SS~~~~-----------------------------------------------------------------~p~~~ 151 (344)
T 2gn4_A 137 VIALSTDKAA-----------------------------------------------------------------NPINL 151 (344)
T ss_dssp EEEECCGGGS-----------------------------------------------------------------SCCSH
T ss_pred EEEecCCccC-----------------------------------------------------------------CCccH
Confidence 9999995322 23578
Q ss_pred HHHHHHHHHHHHHHhc-----CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCce-eeEEecCCCcccceee
Q 037479 237 YVFTKVMGEMFIEHLK-----ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGR-LTCFLGDVKGIVDVIP 310 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~~-----~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~d~v~ 310 (492)
|+.||+.+|+++..+. .+++++++||+.|+|+... ....++..+..|. ...+ .++...+++++
T Consensus 152 Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~----------~i~~~~~~~~~g~~~~~i-~~~~~~r~~i~ 220 (344)
T 2gn4_A 152 YGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS----------VVPFFKKLVQNKASEIPI-TDIRMTRFWIT 220 (344)
T ss_dssp HHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS----------HHHHHHHHHHHTCCCEEE-SCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC----------HHHHHHHHHHcCCCceEE-eCCCeEEeeEE
Confidence 9999999999998773 5799999999999997642 2234444444555 3233 46777889999
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHh
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYF 359 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~ 359 (492)
++|+|++++.++... .. +++|+++++ ++|+.|+++.+.+.+
T Consensus 221 v~D~a~~v~~~l~~~--~~---g~~~~~~~~---~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 221 LDEGVSFVLKSLKRM--HG---GEIFVPKIP---SMKMTDLAKALAPNT 261 (344)
T ss_dssp HHHHHHHHHHHHHHC--CS---SCEEEECCC---EEEHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHhhc--cC---CCEEecCCC---cEEHHHHHHHHHHhC
Confidence 999999999998753 12 789998774 699999999987644
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-31 Score=260.61 Aligned_cols=279 Identities=17% Similarity=0.153 Sum_probs=193.1
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
+..++++|+|||||||||||++|+++|++.|+ +|++++|+... .+.+.. .+.... ..
T Consensus 5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~---~~~~~~---------~~~~~~--------~~ 61 (342)
T 1y1p_A 5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGY---KVRGTARSASK---LANLQK---------RWDAKY--------PG 61 (342)
T ss_dssp TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHH---------HHHHHS--------TT
T ss_pred cccCCCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCccc---HHHHHH---------HhhccC--------CC
Confidence 45678899999999999999999999999996 56889986431 111110 011110 14
Q ss_pred ceEEE-ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 86 KITLV-PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 86 ~v~~v-~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
+++++ .+|+++ .+.+..+++++|+|||+||.......+...+++|+.|+.+++++|++..++++|||+||.+
T Consensus 62 ~~~~~~~~D~~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~ 134 (342)
T 1y1p_A 62 RFETAVVEDMLK-------QGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134 (342)
T ss_dssp TEEEEECSCTTS-------TTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred ceEEEEecCCcC-------hHHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence 68888 899994 3444567789999999999887666778899999999999999998644789999999998
Q ss_pred eecccc-----cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 165 VWGEES-----GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 165 v~~~~~-----~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
+++... ..++|+.+.. .+ ...... ..+..+..+.+.|+.
T Consensus 135 ~~~~~~~~~~~~~~~E~~~~~-----------~~----------------------~~~~~~---~~~~~~~~~~~~Y~~ 178 (342)
T 1y1p_A 135 SALIPKPNVEGIYLDEKSWNL-----------ES----------------------IDKAKT---LPESDPQKSLWVYAA 178 (342)
T ss_dssp GTCCCCTTCCCCEECTTCCCH-----------HH----------------------HHHHHH---SCTTSTTHHHHHHHH
T ss_pred HhcCCCCCCCCcccCccccCc-----------hh----------------------hhhhcc---ccccccccchHHHHH
Confidence 885431 2344443210 00 000000 000000123478999
Q ss_pred HHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhh
Q 037479 240 TKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVV 315 (492)
Q Consensus 240 sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva 315 (492)
||+.+|++++.+ ..+++++++||+.|||+...+... . .....++..+..|....+.+++ ...++++++|+|
T Consensus 179 sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva 253 (342)
T 1y1p_A 179 SKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQ---S-GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIG 253 (342)
T ss_dssp HHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTC---C-CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCC---C-ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHH
Confidence 999999999876 237999999999999998754221 0 1344556566666554434444 567999999999
Q ss_pred hHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 316 NAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 316 ~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
++++.++... ... +..+. +++ .++|+.|+++.+.+.++..
T Consensus 254 ~a~~~~~~~~-~~~---g~~~~-~~g--~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 254 LLHLGCLVLP-QIE---RRRVY-GTA--GTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp HHHHHHHHCT-TCC---SCEEE-ECC--EEECHHHHHHHHHHHCTTS
T ss_pred HHHHHHHcCc-ccC---CceEE-EeC--CCCCHHHHHHHHHHHCCCc
Confidence 9999988742 222 44443 444 6799999999999999864
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=249.69 Aligned_cols=224 Identities=21% Similarity=0.247 Sum_probs=178.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++++++|++.|+ +|++++|. .+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~------------------------------------------~~ 40 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEY---DIYPFDKK------------------------------------------LL 40 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTE---EEEEECTT------------------------------------------TS
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC---EEEEeccc------------------------------------------cc
Confidence 4899999999999999999999985 55888772 26
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+....+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++. ++ +|||+||.++|+
T Consensus 41 D~~-------d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~ 111 (287)
T 3sc6_A 41 DIT-------NISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQ 111 (287)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSC
T ss_pred CCC-------CHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcC
Confidence 777 5555556766 699999999987653 467888999999999999999997 56 699999999998
Q ss_pred ccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
... ..++|+.. ..+.+.|+.||+.+|+
T Consensus 112 ~~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~~E~ 139 (287)
T 3sc6_A 112 GDRPEGYDEFHN----------------------------------------------------PAPINIYGASKYAGEQ 139 (287)
T ss_dssp CCCSSCBCTTSC----------------------------------------------------CCCCSHHHHHHHHHHH
T ss_pred CCCCCCCCCCCC----------------------------------------------------CCCCCHHHHHHHHHHH
Confidence 653 23333321 1467899999999999
Q ss_pred HHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 247 FIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 247 ~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
+++.+.. +++++||+.|||+... .....++..+..|....+.++ ...++||++|+|++++.++.+..
T Consensus 140 ~~~~~~~--~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~ 206 (287)
T 3sc6_A 140 FVKELHN--KYFIVRTSWLYGKYGN---------NFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL 206 (287)
T ss_dssp HHHHHCS--SEEEEEECSEECSSSC---------CHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC
T ss_pred HHHHhCC--CcEEEeeeeecCCCCC---------cHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC
Confidence 9998643 7899999999998652 123445555555655555554 78899999999999999987422
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++||++++ .++|+.|+++.+.+.+|..+
T Consensus 207 ------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 235 (287)
T 3sc6_A 207 ------YGTYHVSNT--GSCSWFEFAKKIFSYANMKV 235 (287)
T ss_dssp ------CEEEECCCB--SCEEHHHHHHHHHHHHTCCC
T ss_pred ------CCeEEEcCC--CcccHHHHHHHHHHHcCCCc
Confidence 569999998 88999999999999999764
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=245.78 Aligned_cols=224 Identities=15% Similarity=0.167 Sum_probs=175.3
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|||||| ||||++|+++|++.|+ +|++++|+.... +.+. ..+++++.
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~---~V~~~~r~~~~~---~~~~------------------------~~~~~~~~ 53 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGW---RIIGTSRNPDQM---EAIR------------------------ASGAEPLL 53 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTC---EEEEEESCGGGH---HHHH------------------------HTTEEEEE
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCC---EEEEEEcChhhh---hhHh------------------------hCCCeEEE
Confidence 379999998 9999999999999996 568999975421 1111 26789999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc-ccceeEEEeeeceeecccc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKC-AKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~~~V~vST~~v~~~~~ 170 (492)
+|+++ .+ ++++|+|||+||.....++ .+.+++++|++. .++++|||+||+.+||...
T Consensus 54 ~D~~d-------~~-----~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~ 111 (286)
T 3ius_A 54 WPGEE-------PS-----LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHD 111 (286)
T ss_dssp SSSSC-------CC-----CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCT
T ss_pred ecccc-------cc-----cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCC
Confidence 99994 11 5789999999997755422 357889999884 3789999999999998764
Q ss_pred c-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 171 G-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 171 ~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
+ .++|+.. ..+.+.|+.||+.+|++++
T Consensus 112 ~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~~E~~~~ 139 (286)
T 3ius_A 112 GAWVDETTP----------------------------------------------------LTPTAARGRWRVMAEQQWQ 139 (286)
T ss_dssp TCEECTTSC----------------------------------------------------CCCCSHHHHHHHHHHHHHH
T ss_pred CCCcCCCCC----------------------------------------------------CCCCCHHHHHHHHHHHHHH
Confidence 3 3444321 1466899999999999999
Q ss_pred HhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCC
Q 037479 250 HLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQP 329 (492)
Q Consensus 250 ~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~ 329 (492)
++ .+++++++||+.|||+...++. .+..|....+.++ ...+++||++|+|++++.++.+.. .
T Consensus 140 ~~-~~~~~~ilRp~~v~G~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~--~ 201 (286)
T 3ius_A 140 AV-PNLPLHVFRLAGIYGPGRGPFS--------------KLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD--P 201 (286)
T ss_dssp HS-TTCCEEEEEECEEEBTTBSSST--------------TSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC--T
T ss_pred hh-cCCCEEEEeccceECCCchHHH--------------HHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC--C
Confidence 97 6899999999999999865422 2234444445444 578899999999999999997532 2
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 330 SDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 330 ~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++||++++ .++|+.|+++.+.+.+|..+
T Consensus 202 ---g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 230 (286)
T 3ius_A 202 ---GAVYNVCDD--EPVPPQDVIAYAAELQGLPL 230 (286)
T ss_dssp ---TCEEEECCS--CCBCHHHHHHHHHHHHTCCC
T ss_pred ---CCEEEEeCC--CCccHHHHHHHHHHHcCCCC
Confidence 789999998 88999999999999999764
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=254.51 Aligned_cols=243 Identities=18% Similarity=0.228 Sum_probs=187.2
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
.+.+++|+|||||||||||++|+++|++.|+ +|++++|....... +.. . ..+
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~-------~~~----------------~--l~~ 66 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGH---EILVIDNFATGKRE-------VLP----------------P--VAG 66 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTC---EEEEEECCSSSCGG-------GSC----------------S--CTT
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCccchh-------hhh----------------c--cCC
Confidence 4667899999999999999999999999996 56899996543210 000 0 146
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD--ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
+.++.+|++ +.+.+..+++ ++|+|||+||..... +.+. +++|+.|+.+++++|.+. ++++|||+||
T Consensus 67 v~~~~~Dl~-------d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS 136 (330)
T 2pzm_A 67 LSVIEGSVT-------DAGLLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQT 136 (330)
T ss_dssp EEEEECCTT-------CHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEEE
T ss_pred ceEEEeeCC-------CHHHHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEecC
Confidence 889999999 5555667777 999999999987642 3333 899999999999999987 7889999999
Q ss_pred ceeeccccc---ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 163 AFVWGEESG---MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 163 ~~v~~~~~~---~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
..+++...+ .++|+. .+.+.|+.
T Consensus 137 ~~~~~~~~~~~~~~~E~~------------------------------------------------------~~~~~Y~~ 162 (330)
T 2pzm_A 137 ALCYGRPATVPIPIDSPT------------------------------------------------------APFTSYGI 162 (330)
T ss_dssp GGGGCSCSSSSBCTTCCC------------------------------------------------------CCCSHHHH
T ss_pred HHHhCCCccCCCCcCCCC------------------------------------------------------CCCChHHH
Confidence 999876421 122211 24579999
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhh-HH
Q 037479 240 TKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVN-AI 318 (492)
Q Consensus 240 sK~~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~-~i 318 (492)
||+.+|++++.+ +++.+++||+.+||+... . .....++..+..|. ..++++. ..++++++|+|+ ++
T Consensus 163 sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~~--~------~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~ 229 (330)
T 2pzm_A 163 SKTAGEAFLMMS--DVPVVSLRLANVTGPRLA--I------GPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIAD 229 (330)
T ss_dssp HHHHHHHHHHTC--SSCEEEEEECEEECTTCC--S------SHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHc--CCCEEEEeeeeeECcCCC--C------CHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHH
Confidence 999999999986 899999999999998741 1 12233444444454 3445566 789999999999 99
Q ss_pred HHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 319 VVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 319 i~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+.++.. .. +++||++++ .++|+.|+++.+.+.+|..
T Consensus 230 ~~~~~~-~~-----g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 230 LSLQEG-RP-----TGVFNVSTG--EGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp HHTSTT-CC-----CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred HHHhhc-CC-----CCEEEeCCC--CCCCHHHHHHHHHHHhCCC
Confidence 888763 11 579999998 8999999999999999876
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=252.29 Aligned_cols=257 Identities=17% Similarity=0.162 Sum_probs=190.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|+|||||||||||++++++|++.|+ +|+++.|+...... +++. ++ + ...++.+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~-~~~~-~~-------------~------~~~~~~~ 56 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY---EVYGADRRSGEFAS-WRLK-EL-------------G------IENDVKI 56 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCCSTTTT-HHHH-HT-------------T------CTTTEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCCccccc-ccHh-hc-------------c------ccCceeE
Confidence 4689999999999999999999999996 56899997654321 2221 00 0 0146889
Q ss_pred EecCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccc-eeEEEeeec
Q 037479 90 VPGDITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKL-IVLVHVSTA 163 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~-~~~V~vST~ 163 (492)
+.+|++ +.+.+..++++ +|+|||+||....+ +.+...+++|+.|+.+++++|+++ ++ ++|||+||.
T Consensus 57 ~~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~ 128 (345)
T 2z1m_A 57 IHMDLL-------EFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTS 128 (345)
T ss_dssp CCCCTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEG
T ss_pred EECCCC-------CHHHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEech
Confidence 999999 55555566664 69999999976532 456788999999999999999987 65 899999999
Q ss_pred eeeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 164 FVWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 164 ~v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
++||...+ .++|.. +..+.+.|+.||+
T Consensus 129 ~vyg~~~~~~~~e~~----------------------------------------------------~~~~~~~Y~~sK~ 156 (345)
T 2z1m_A 129 EMFGKVQEIPQTEKT----------------------------------------------------PFYPRSPYAVAKL 156 (345)
T ss_dssp GGGCSCSSSSBCTTS----------------------------------------------------CCCCCSHHHHHHH
T ss_pred hhcCCCCCCCCCccC----------------------------------------------------CCCCCChhHHHHH
Confidence 99986532 222221 1145689999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee-eEEecCCCcccceeehhhhhhHHH
Q 037479 243 MGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL-TCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 243 ~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~v~vddva~~ii 319 (492)
.+|++++.+ ..+++++++|+..++|+.... .+.. .....++..+..|.. ....+++...+++++++|+|++++
T Consensus 157 ~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~ 232 (345)
T 2z1m_A 157 FGHWITVNYREAYNMFACSGILFNHESPLRGI--EFVT--RKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMW 232 (345)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCceEeeeeeeecCCCCCC--cchh--HHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHH
Confidence 999999876 347999999999999987532 1110 112233334445533 235678888899999999999999
Q ss_pred HHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
.++.+. . +++||++++ .++|+.|+++.+.+.+|..
T Consensus 233 ~~~~~~-~-----~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 233 LMMQQP-E-----PDDYVIATG--ETHTVREFVEKAAKIAGFD 267 (345)
T ss_dssp HHHTSS-S-----CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred HHHhCC-C-----CceEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 988632 1 468999998 8999999999999999865
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=251.46 Aligned_cols=244 Identities=19% Similarity=0.197 Sum_probs=181.9
Q ss_pred cHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 5 SVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 5 ~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
+....+++|+|||||||||||++|+++|++.|+ +|++++|+..... +.+. . .
T Consensus 14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~l~---------------------~--~ 65 (333)
T 2q1w_A 14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGD---KVVGIDNFATGRR--EHLK---------------------D--H 65 (333)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCG--GGSC---------------------C--C
T ss_pred eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEECCCccch--hhHh---------------------h--c
Confidence 345667899999999999999999999999985 5689999754321 0000 0 0
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD--ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
.++.++.+|++ +.+.+..++++ +|+|||+||..... +.+. +++|+.|+.+++++|++. ++++|||+
T Consensus 66 ~~~~~~~~Dl~-------d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~ 135 (333)
T 2q1w_A 66 PNLTFVEGSIA-------DHALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYF 135 (333)
T ss_dssp TTEEEEECCTT-------CHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred CCceEEEEeCC-------CHHHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence 46889999999 55556677776 99999999987642 2333 899999999999999987 78899999
Q ss_pred eeceeec----ccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC-c
Q 037479 161 STAFVWG----EESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP-N 235 (492)
Q Consensus 161 ST~~v~~----~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-n 235 (492)
||..+++ ...+.++|+. .+. +
T Consensus 136 SS~~~~g~~~~~~~~~~~E~~------------------------------------------------------~p~~~ 161 (333)
T 2q1w_A 136 QTALCYGVKPIQQPVRLDHPR------------------------------------------------------NPANS 161 (333)
T ss_dssp EEGGGGCSCCCSSSBCTTSCC------------------------------------------------------CCTTC
T ss_pred CcHHHhCCCcccCCCCcCCCC------------------------------------------------------CCCCC
Confidence 9999987 3221122211 134 7
Q ss_pred hHHHHHHHHHHHHHH-hcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhh
Q 037479 236 TYVFTKVMGEMFIEH-LKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~-~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddv 314 (492)
.|+.||+.+|++++. +. +++++||+.|||+... . .....++..+..|. .+++ +....++++++|+
T Consensus 162 ~Y~~sK~~~E~~~~~s~~---~~~ilR~~~v~gp~~~--~------~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dv 227 (333)
T 2q1w_A 162 SYAISKSANEDYLEYSGL---DFVTFRLANVVGPRNV--S------GPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDL 227 (333)
T ss_dssp HHHHHHHHHHHHHHHHTC---CEEEEEESEEESTTCC--S------SHHHHHHHHHHTTC--CCEE-EECEECEEEHHHH
T ss_pred chHHHHHHHHHHHHhhhC---CeEEEeeceEECcCCc--C------cHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHH
Confidence 899999999999998 65 8999999999998731 1 12334444444554 3344 5677899999999
Q ss_pred hhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 315 VNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 315 a~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
|++++.++.... +++||++++ .++|+.|+++.+.+.+|..
T Consensus 228 a~ai~~~~~~~~------g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 228 ARATVRAVDGVG------HGAYHFSSG--TDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp HHHHHHHHTTCC------CEEEECSCS--CCEEHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhcCC------CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 999999886321 579999998 8899999999999999875
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-30 Score=251.31 Aligned_cols=240 Identities=16% Similarity=0.100 Sum_probs=159.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|||||||||||++|+++|++.|+ +|++++|+... ++ ++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~---------------------------------~~--~~~ 43 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW---HAVGCGFRRAR---------------------------------PK--FEQ 43 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEC---------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC---eEEEEccCCCC---------------------------------CC--eEE
Confidence 58999999999999999999999985 56888885421 11 567
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+|+++ .+.+..+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++. ++ +|||+||..++
T Consensus 44 ~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 114 (315)
T 2ydy_A 44 VNLLD-------SNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVF 114 (315)
T ss_dssp ---------------CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGS
T ss_pred ecCCC-------HHHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHc
Confidence 89984 333445555 499999999976542 456778999999999999999987 55 89999999999
Q ss_pred cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 167 GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 167 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
+...+.++|+.. ..+.+.|+.||+.+|+
T Consensus 115 ~~~~~~~~E~~~----------------------------------------------------~~~~~~Y~~sK~~~e~ 142 (315)
T 2ydy_A 115 DGTNPPYREEDI----------------------------------------------------PAPLNLYGKTKLDGEK 142 (315)
T ss_dssp CSSSCSBCTTSC----------------------------------------------------CCCCSHHHHHHHHHHH
T ss_pred CCCCCCCCCCCC----------------------------------------------------CCCcCHHHHHHHHHHH
Confidence 874334444321 1456899999999999
Q ss_pred HHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc-CceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 247 FIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG-KGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 247 ~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
+++.+ +++++++||+.|||+...+..+++. .++..+. .|....+. ++...++++++|+|++++.++.+.
T Consensus 143 ~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~ 212 (315)
T 2ydy_A 143 AVLEN--NLGAAVLRIPILYGEVEKLEESAVT------VMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKR 212 (315)
T ss_dssp HHHHH--CTTCEEEEECSEECSCSSGGGSTTG------GGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHH
T ss_pred HHHHh--CCCeEEEeeeeeeCCCCcccccHHH------HHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhh
Confidence 99986 4688999999999987753222221 2233333 34332333 457789999999999999988753
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
...... +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 213 ~~~~~~-~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (315)
T 2ydy_A 213 MLDPSI-KGTFHWSGN--EQMTKYEMACAIADAFNLPS 247 (315)
T ss_dssp HTCTTC-CEEEECCCS--CCBCHHHHHHHHHHHTTCCC
T ss_pred ccccCC-CCeEEEcCC--CcccHHHHHHHHHHHhCCCh
Confidence 111111 789999998 89999999999999998764
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=254.83 Aligned_cols=260 Identities=17% Similarity=0.184 Sum_probs=189.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|+ +|++++|+...... +++. ++.. .+.. ....++.++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~-~l~~-----~~~~--------~~~~~~~~~~~ 86 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGY---EVHGIVRRSSSFNT-GRIE-HLYK-----NPQA--------HIEGNMKLHYG 86 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCC-TTTG-GGC----------------------CEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCccccch-hhHH-HHhh-----hhcc--------ccCCCceEEEc
Confidence 5899999999999999999999985 56899997643210 1110 0000 0000 00256889999
Q ss_pred CCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccc---eeEEEeeece
Q 037479 93 DITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKL---IVLVHVSTAF 164 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~---~~~V~vST~~ 164 (492)
|++ +.+.+..++++ +|+|||+||..... +.+...+++|+.|+.+++++|++. ++ ++|||+||..
T Consensus 87 Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~ 158 (375)
T 1t2a_A 87 DLT-------DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSE 158 (375)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGG
T ss_pred cCC-------CHHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchh
Confidence 999 55555566664 69999999986543 456778999999999999999987 55 7999999999
Q ss_pred eeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 165 VWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 165 v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
+|+...+ .++|+.. ..+.+.|+.||+.
T Consensus 159 ~~~~~~~~~~~E~~~----------------------------------------------------~~~~~~Y~~sK~~ 186 (375)
T 1t2a_A 159 LYGKVQEIPQKETTP----------------------------------------------------FYPRSPYGAAKLY 186 (375)
T ss_dssp GTCSCSSSSBCTTSC----------------------------------------------------CCCCSHHHHHHHH
T ss_pred hhCCCCCCCCCccCC----------------------------------------------------CCCCChhHHHHHH
Confidence 9986432 2333311 1356799999999
Q ss_pred HHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee-eEEecCCCcccceeehhhhhhHHHH
Q 037479 244 GEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL-TCFLGDVKGIVDVIPADMVVNAIVV 320 (492)
Q Consensus 244 aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~v~vddva~~ii~ 320 (492)
+|++++.+ ..+++++++||+.+||+...+ ++.. .....++..+..|.. ...+++++..+++|||+|+|++++.
T Consensus 187 ~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~ 262 (375)
T 1t2a_A 187 AYWIVVNFREAYNLFAVNGILFNHESPRRGA--NFVT--RKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWL 262 (375)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEecccccCCCCCC--Ccch--HHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHH
Confidence 99999876 348999999999999987532 1211 112334444444543 2456888899999999999999999
Q ss_pred HHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 321 AVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 321 ~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
++... . +++||++++ .++|+.|+++.+.+.+|..
T Consensus 263 ~~~~~-~-----~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 296 (375)
T 1t2a_A 263 MLQND-E-----PEDFVIATG--EVHSVREFVEKSFLHIGKT 296 (375)
T ss_dssp HHHSS-S-----CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred HHhcC-C-----CceEEEeCC--CcccHHHHHHHHHHHhCCC
Confidence 98742 1 468999998 8899999999999999864
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-30 Score=248.31 Aligned_cols=231 Identities=17% Similarity=0.157 Sum_probs=178.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|+ .|+ +|++++|+.. .+.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~---~V~~~~r~~~--------------------------------------~~~~ 38 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVG---NLIALDVHSK--------------------------------------EFCG 38 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTS---EEEEECTTCS--------------------------------------SSCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCC---eEEEeccccc--------------------------------------cccc
Confidence 589999999999999999999 785 5688888531 2568
Q ss_pred CCCCCCCCCCchhhHHHhccC--ccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWNK--LDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+.+..++++ +|+|||+||.... .+.+...+++|+.|+.+++++|++. ++ +|||+||..+|+
T Consensus 39 D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~ 109 (299)
T 1n2s_A 39 DFS-------NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFP 109 (299)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSC
T ss_pred cCC-------CHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEe
Confidence 988 55555567765 9999999997654 2456788999999999999999987 56 799999999998
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
...+ .++|+.. ..+.+.|+.||+.+|+
T Consensus 110 ~~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~~~E~ 137 (299)
T 1n2s_A 110 GTGDIPWQETDA----------------------------------------------------TSPLNVYGKTKLAGEK 137 (299)
T ss_dssp CCTTCCBCTTSC----------------------------------------------------CCCSSHHHHHHHHHHH
T ss_pred CCCCCCCCCCCC----------------------------------------------------CCCccHHHHHHHHHHH
Confidence 6542 2333221 1456899999999999
Q ss_pred HHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 247 FIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 247 ~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
+++++. .+++++||+.|||+... + ....++..+..|......+ +...++++++|+|++++.++.+..
T Consensus 138 ~~~~~~--~~~~ilRp~~v~G~~~~---~------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~ 204 (299)
T 1n2s_A 138 ALQDNC--PKHLIFRTSWVYAGKGN---N------FAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVAL 204 (299)
T ss_dssp HHHHHC--SSEEEEEECSEECSSSC---C------HHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHH
T ss_pred HHHHhC--CCeEEEeeeeecCCCcC---c------HHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhc
Confidence 999864 39999999999998752 1 2233444444454444444 378899999999999999987542
Q ss_pred cCC-CCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 327 KQP-SDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 327 ~~~-~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
... . +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 205 ~~~~~--~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 238 (299)
T 1n2s_A 205 NKPEV--AGLYHLVAG--GTTTWHDYAALVFDEARKAG 238 (299)
T ss_dssp HCGGG--CEEEECCCB--SCEEHHHHHHHHHHHHHHHT
T ss_pred ccccc--CceEEEeCC--CCCCHHHHHHHHHHHhCCCc
Confidence 111 1 689999998 89999999999999998763
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=247.89 Aligned_cols=245 Identities=17% Similarity=0.127 Sum_probs=182.6
Q ss_pred EEEEeCCcchhhHHHHHHHHhh--CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 14 TILVTGATGFLAKIFVEKILRV--QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~--g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|||||||||||++|+++|++. |+ +|+++.|+.... .++.++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~--------------------------------~~~~~~~ 45 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKK---NVIASDIVQRDT--------------------------------GGIKFIT 45 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGG---GEEEEESSCCCC--------------------------------TTCCEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCC---EEEEecCCCccc--------------------------------cCceEEE
Confidence 5899999999999999999998 65 458888864321 1356789
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCc--chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNF--DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
+|++ +.+.+..+++ ++|+|||+||.... .+.+...+++|+.|+.+++++|++. ++++|||+||..+++
T Consensus 46 ~D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~ 117 (317)
T 3ajr_A 46 LDVS-------NRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFG 117 (317)
T ss_dssp CCTT-------CHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCC
T ss_pred ecCC-------CHHHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhC
Confidence 9999 5555657776 89999999997543 2456778999999999999999987 789999999999998
Q ss_pred cccc--ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 168 EESG--MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 168 ~~~~--~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
.... .++|.. +..+.+.|+.||+.+|
T Consensus 118 ~~~~~~~~~e~~----------------------------------------------------~~~p~~~Y~~sK~~~e 145 (317)
T 3ajr_A 118 PETPKNKVPSIT----------------------------------------------------ITRPRTMFGVTKIAAE 145 (317)
T ss_dssp TTSCSSSBCSSS----------------------------------------------------CCCCCSHHHHHHHHHH
T ss_pred CCCCCCCccccc----------------------------------------------------cCCCCchHHHHHHHHH
Confidence 6421 122221 1146789999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
++++.+ ..+++++++||+.+||+...|..+.. ......+.....+.....+++++..+++|+++|+|++++.++.
T Consensus 146 ~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~ 222 (317)
T 3ajr_A 146 LLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTT---DYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE 222 (317)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSS---THHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEecCcEeccCCCCCCcch---hHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHh
Confidence 999876 35899999999999998764432211 1122233333333333456777888999999999999999987
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
........ +++||+++ .++|+.|+++.+.+.++
T Consensus 223 ~~~~~~~~-g~~~~i~~---~~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 223 ADRDKLVL-RNGYNVTA---YTFTPSELYSKIKERIP 255 (317)
T ss_dssp CCGGGCSS-CSCEECCS---EEECHHHHHHHHHTTCC
T ss_pred CCcccccc-CceEecCC---ccccHHHHHHHHHHHCC
Confidence 53221111 47999986 47999999999998876
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-29 Score=249.56 Aligned_cols=261 Identities=13% Similarity=0.096 Sum_probs=191.6
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCC----CCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPN----VKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~----V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
++++|+|||||||||||++|+++|++.|+. +.+|+++.|....... ...
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------------------------~~~ 63 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------------------------GFS 63 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------------------------TCC
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------------------------ccC
Confidence 467899999999999999999999999821 1256888887543210 012
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhc-cCccEEEEcccccCc--chhHHHHHHHhHHHHHHHHHHHHhcc----cceeE
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMW-NKLDVVINLAATTNF--DERYDVALDLNTFGAKHVLNFSKKCA----KLIVL 157 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~-~~vd~Vih~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~~~----~~~~~ 157 (492)
.++.++.+|++ +.+.+..++ +++|+|||+||.... .+.+...+++|+.||.+++++|++.+ ++++|
T Consensus 64 ~~~~~~~~Dl~-------d~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~i 136 (342)
T 2hrz_A 64 GAVDARAADLS-------APGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRV 136 (342)
T ss_dssp SEEEEEECCTT-------STTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred CceeEEEcCCC-------CHHHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEE
Confidence 57889999999 444455666 489999999997642 24567889999999999999999873 27899
Q ss_pred EEeeeceeecccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 158 VHVSTAFVWGEES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 158 V~vST~~v~~~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
||+||..+|+... ..++|+.. ..+.+.
T Consensus 137 v~~SS~~~~~~~~~~~~~E~~~----------------------------------------------------~~~~~~ 164 (342)
T 2hrz_A 137 VFTSSIAVFGAPLPYPIPDEFH----------------------------------------------------TTPLTS 164 (342)
T ss_dssp EEEEEGGGCCSSCCSSBCTTCC----------------------------------------------------CCCSSH
T ss_pred EEeCchHhhCCCCCCCcCCCCC----------------------------------------------------CCCcch
Confidence 9999999998642 23333321 145689
Q ss_pred HHHHHHHHHHHHHHh--cCCCcEEEEeCCceec-CCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 237 YVFTKVMGEMFIEHL--KENMSVAIVRPTIITG-TYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g-~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
|+.||+.+|++++++ ..+++.+++|++.|+| +.. +... .......++.....|....++++++...++++++|
T Consensus 165 Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D 240 (342)
T 2hrz_A 165 YGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGK-PNAA---ASGFFSNILREPLVGQEAVLPVPESIRHWHASPRS 240 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSS-CCCS---GGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCC-Ccch---hHHHHHHHHHHHhcCCCeeccCCCccceeeEehHH
Confidence 999999999999887 3478999999999998 433 1100 00123344555566665556666677788999999
Q ss_pred hhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 314 VVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 314 va~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+|++++.++......... +++||++ + .++|+.|+++.+.+.+|..+
T Consensus 241 va~~~~~~~~~~~~~~~~-~~~~ni~-g--~~~s~~e~~~~i~~~~g~~~ 286 (342)
T 2hrz_A 241 AVGFLIHGAMIDVEKVGP-RRNLSMP-G--LSATVGEQIEALRKVAGEKA 286 (342)
T ss_dssp HHHHHHHHHHSCHHHHCS-CCEEECC-C--EEEEHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHhccccccCC-ccEEEcC-C--CCCCHHHHHHHHHHHcCccc
Confidence 999999998743210001 6799995 4 57999999999999988653
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=271.84 Aligned_cols=270 Identities=20% Similarity=0.215 Sum_probs=198.0
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
..+++|+|||||||||||++|+++|++. |+ +|++++|+..... + +. ...+
T Consensus 311 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~---~V~~~~r~~~~~~---~----~~-------------------~~~~ 361 (660)
T 1z7e_A 311 TARRRTRVLILGVNGFIGNHLTERLLREDHY---EVYGLDIGSDAIS---R----FL-------------------NHPH 361 (660)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHHHSSSE---EEEEEESCCTTTG---G----GT-------------------TCTT
T ss_pred hhccCceEEEEcCCcHHHHHHHHHHHhcCCC---EEEEEEcCchhhh---h----hc-------------------cCCc
Confidence 4467899999999999999999999997 65 5699999764321 1 00 0257
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA 163 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~ 163 (492)
+.++.+|++++ .+..+.+++++|+|||+||.... ..++...+++|+.||.+++++|++. + ++|||+||.
T Consensus 362 v~~v~~Dl~d~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~ 433 (660)
T 1z7e_A 362 FHFVEGDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTS 433 (660)
T ss_dssp EEEEECCTTTC------HHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCG
T ss_pred eEEEECCCCCc------HHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecH
Confidence 89999999942 23345677899999999997653 2456778999999999999999987 5 899999999
Q ss_pred eeeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 164 FVWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 164 ~v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
++|+...+ .++|+...... .+ ...+.+.|+.||+
T Consensus 434 ~vyg~~~~~~~~E~~~~~~~-----~p----------------------------------------~~~p~~~Y~~sK~ 468 (660)
T 1z7e_A 434 EVYGMCSDKYFDEDHSNLIV-----GP----------------------------------------VNKPRWIYSVSKQ 468 (660)
T ss_dssp GGGBTCCSSSBCTTTCCEEE-----CC----------------------------------------TTCTTHHHHHHHH
T ss_pred HHcCCCCCcccCCCcccccc-----Cc----------------------------------------ccCCCCCcHHHHH
Confidence 99986432 23333211000 00 0134568999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCcccc-CcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHH
Q 037479 243 MGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAE-GIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 243 ~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii 319 (492)
.+|++++.+ ..+++++++||+.|||+...+...+.. .......++..+..|....++++++..+++++|+|+|++++
T Consensus 469 ~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~ 548 (660)
T 1z7e_A 469 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY 548 (660)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHH
Confidence 999999876 348999999999999998643111000 01223455566666766667788889999999999999999
Q ss_pred HHHHhhhcCCCCCCcEEEecCCCCC-cccHHHHHHHHHHHhhcCC
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSSLRN-PLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~~~~-~~t~~e~~~~~~~~~~~~p 363 (492)
.++........ +++||++++ . ++|+.|+++.+.+.+|..+
T Consensus 549 ~~l~~~~~~~~--g~~~ni~~~--~~~~s~~el~~~i~~~~g~~~ 589 (660)
T 1z7e_A 549 RIIENAGNRCD--GEIINIGNP--ENEASIEELGEMLLASFEKHP 589 (660)
T ss_dssp HHHHCGGGTTT--TEEEEECCG--GGEEEHHHHHHHHHHHHHHCT
T ss_pred HHHhCccccCC--CeEEEECCC--CCCcCHHHHHHHHHHHhcCCC
Confidence 99875332111 789999987 5 8999999999999998754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-29 Score=251.32 Aligned_cols=260 Identities=17% Similarity=0.159 Sum_probs=187.3
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|||||||||||++++++|++.|+ +|+++.|+..... .+++. ++ ..+.. ....++.++.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-~~~~~-~~---------~~~~~-----~~~~~~~~~~ 61 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGY---EVHGIKRRASSFN-TERVD-HI---------YQDPH-----TCNPKFHLHY 61 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECC-------------------------------------CCEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCCcccc-hHHHH-HH---------hhccc-----cCCCceEEEE
Confidence 47899999999999999999999985 5689998754311 11111 00 00000 0025788999
Q ss_pred cCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccc---eeEEEeeec
Q 037479 92 GDITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKL---IVLVHVSTA 163 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~---~~~V~vST~ 163 (492)
+|++ +.+....++++ +|+|||+||..... +.+...+++|+.|+.+++++|++. ++ ++|||+||.
T Consensus 62 ~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~ 133 (372)
T 1db3_A 62 GDLS-------DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTS 133 (372)
T ss_dssp CCSS-------CHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEG
T ss_pred CCCC-------CHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCCh
Confidence 9999 55555566664 79999999976532 456778899999999999999987 66 799999999
Q ss_pred eeeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 164 FVWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 164 ~v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
.+|+...+ .++|+.. ..+.+.|+.||+
T Consensus 134 ~v~g~~~~~~~~E~~~----------------------------------------------------~~~~~~Y~~sK~ 161 (372)
T 1db3_A 134 ELYGLVQEIPQKETTP----------------------------------------------------FYPRSPYAVAKL 161 (372)
T ss_dssp GGGTTCCSSSBCTTSC----------------------------------------------------CCCCSHHHHHHH
T ss_pred hhhCCCCCCCCCccCC----------------------------------------------------CCCCChHHHHHH
Confidence 99986432 2333211 145689999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee-eEEecCCCcccceeehhhhhhHHH
Q 037479 243 MGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL-TCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 243 ~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~v~vddva~~ii 319 (492)
.+|++++.+ ..+++++++||+.+||+...+ .+.. .....++..+..|.. ....++++..+++|||+|+|++++
T Consensus 162 ~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~ 237 (372)
T 1db3_A 162 YAYWITVNYRESYGMYACNGILFNHESPRRGE--TFVT--RKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 237 (372)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEEECCccCCCCCC--cchh--hHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHH
Confidence 999999876 348999999999999987632 1111 112344445555643 345688899999999999999999
Q ss_pred HHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
.++.+. . +++||++++ .++|+.|+++.+.+.+|..
T Consensus 238 ~~~~~~-~-----~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 272 (372)
T 1db3_A 238 MMLQQE-Q-----PEDFVIATG--VQYSVRQFVEMAAAQLGIK 272 (372)
T ss_dssp HTTSSS-S-----CCCEEECCC--CCEEHHHHHHHHHHTTTEE
T ss_pred HHHhcC-C-----CceEEEcCC--CceeHHHHHHHHHHHhCCC
Confidence 887632 1 568999998 8899999999999998864
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=236.12 Aligned_cols=221 Identities=15% Similarity=0.118 Sum_probs=162.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|||||||||||++++++|++.|+ +|++++|+...... ...++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~----------------------------~~~~~~~~~ 52 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF---EVTAVVRHPEKIKI----------------------------ENEHLKVKK 52 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC---EEEEECSCGGGCCC----------------------------CCTTEEEEC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEEcCcccchh----------------------------ccCceEEEE
Confidence 37999999999999999999999995 66999997543211 126789999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESG 171 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~ 171 (492)
+|++ +.+.+..+++++|+|||+|+....+ ...+++|+.++.+++++|++. ++++|||+||..++....+
T Consensus 53 ~Dl~-------d~~~~~~~~~~~d~vi~~a~~~~~~---~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~ 121 (227)
T 3dhn_A 53 ADVS-------SLDEVCEVCKGADAVISAFNPGWNN---PDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPG 121 (227)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETT
T ss_pred ecCC-------CHHHHHHHhcCCCEEEEeCcCCCCC---hhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCC
Confidence 9999 6666678889999999999865222 236888999999999999998 7899999999887654433
Q ss_pred ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh
Q 037479 172 MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL 251 (492)
Q Consensus 172 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 251 (492)
...|+. +..+.+.|+.+|+.+|.+++.+
T Consensus 122 ~~~~~~----------------------------------------------------~~~p~~~Y~~sK~~~e~~~~~~ 149 (227)
T 3dhn_A 122 LRLMDS----------------------------------------------------GEVPENILPGVKALGEFYLNFL 149 (227)
T ss_dssp EEGGGT----------------------------------------------------TCSCGGGHHHHHHHHHHHHHTG
T ss_pred CccccC----------------------------------------------------CcchHHHHHHHHHHHHHHHHHH
Confidence 222211 1135678999999999888876
Q ss_pred --cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCC
Q 037479 252 --KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQP 329 (492)
Q Consensus 252 --~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~ 329 (492)
..+++++++||+.|||+...+ +... .+....+. .++ ..++|+++|+|++++.++.+.. ..
T Consensus 150 ~~~~~~~~~ilrp~~v~g~~~~~--~~~~-------------~~~~~~~~-~~~-~~~~i~~~Dva~ai~~~l~~~~-~~ 211 (227)
T 3dhn_A 150 MKEKEIDWVFFSPAADMRPGVRT--GRYR-------------LGKDDMIV-DIV-GNSHISVEDYAAAMIDELEHPK-HH 211 (227)
T ss_dssp GGCCSSEEEEEECCSEEESCCCC--CCCE-------------EESSBCCC-CTT-SCCEEEHHHHHHHHHHHHHSCC-CC
T ss_pred hhccCccEEEEeCCcccCCCccc--ccee-------------ecCCCccc-CCC-CCcEEeHHHHHHHHHHHHhCcc-cc
Confidence 468999999999999987632 1100 11111111 112 2799999999999999998532 22
Q ss_pred CCCCcEEEecCCCCCcccHH
Q 037479 330 SDVNNIYQVGSSLRNPLIYT 349 (492)
Q Consensus 330 ~~~~~iy~i~~~~~~~~t~~ 349 (492)
+++|+++++ .|.+|.
T Consensus 212 ---g~~~~~~~~--~~~~~~ 226 (227)
T 3dhn_A 212 ---QERFTIGYL--EHHHHH 226 (227)
T ss_dssp ---SEEEEEECC--SCCC--
T ss_pred ---CcEEEEEee--hhcccC
Confidence 899999999 777775
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-29 Score=251.19 Aligned_cols=259 Identities=18% Similarity=0.167 Sum_probs=189.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC-ceEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE-KITLVP 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~-~v~~v~ 91 (492)
|+|||||||||||++|+++|++.|+ +|++++|+...... +++. .+. ..+.. ... ++.++.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~-~~~-----~~~~~---------~~~~~~~~~~ 89 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY---EVHGLIRRSSNFNT-QRIN-HIY-----IDPHN---------VNKALMKLHY 89 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCC-TTTT-TTC----------------------CCEEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC---EEEEEecCCccccc-hhhh-hhh-----hcccc---------ccccceEEEE
Confidence 5899999999999999999999986 56899997653110 0000 000 00000 012 788999
Q ss_pred cCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccce-----eEEEee
Q 037479 92 GDITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLI-----VLVHVS 161 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-----~~V~vS 161 (492)
+|++ +.+.+..++++ +|+|||+||..... +.+...+++|+.|+.+++++|++. +++ +|||+|
T Consensus 90 ~Dl~-------d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~S 161 (381)
T 1n7h_A 90 ADLT-------DASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAG 161 (381)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEE
T ss_pred CCCC-------CHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeC
Confidence 9999 55555566664 69999999987643 456788999999999999999987 565 999999
Q ss_pred eceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHH
Q 037479 162 TAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241 (492)
Q Consensus 162 T~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK 241 (492)
|.++||...+.++|+.. ..+.+.|+.||
T Consensus 162 S~~vyg~~~~~~~E~~~----------------------------------------------------~~~~~~Y~~sK 189 (381)
T 1n7h_A 162 SSEMFGSTPPPQSETTP----------------------------------------------------FHPRSPYAASK 189 (381)
T ss_dssp EGGGGTTSCSSBCTTSC----------------------------------------------------CCCCSHHHHHH
T ss_pred cHHHhCCCCCCCCCCCC----------------------------------------------------CCCCCchHHHH
Confidence 99999875433333211 14568999999
Q ss_pred HHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee-eEEecCCCcccceeehhhhhhHH
Q 037479 242 VMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL-TCFLGDVKGIVDVIPADMVVNAI 318 (492)
Q Consensus 242 ~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~v~vddva~~i 318 (492)
+.+|++++.+ ..+++++++||+.+||+...+ .+.. .....++..+..|.. ....++++...++++|+|+|+++
T Consensus 190 ~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~ 265 (381)
T 1n7h_A 190 CAAHWYTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 265 (381)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCC--cchh--HHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHH
Confidence 9999999877 348999999999999987532 1111 112233334444432 23467888899999999999999
Q ss_pred HHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 319 VVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 319 i~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+.++... . +++||++++ .++|+.|+++.+.+.+|..
T Consensus 266 ~~~~~~~-~-----~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 266 WLMLQQE-K-----PDDYVVATE--EGHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp HHHHTSS-S-----CCEEEECCS--CEEEHHHHHHHHHHHTTCC
T ss_pred HHHHhCC-C-----CCeEEeeCC--CCCcHHHHHHHHHHHcCCC
Confidence 9988632 1 579999998 8999999999999999864
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=267.32 Aligned_cols=271 Identities=18% Similarity=0.159 Sum_probs=191.2
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH-HHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA-TVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~-~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
+...+++|+|||||||||||++|+++|++.|+ +|+++.|....... .+++. . ...
T Consensus 5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~l~-------------~--------~~~ 60 (699)
T 1z45_A 5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGY---DCVVADNLSNSTYDSVARLE-------------V--------LTK 60 (699)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTHHHHHHH-------------H--------HHT
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCCcchHHHHHHHh-------------h--------ccC
Confidence 34456789999999999999999999999986 56889987654321 11211 0 012
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.++.++.+|++ +.+.+..+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||
T Consensus 61 ~~v~~v~~Dl~-------d~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~ 132 (699)
T 1z45_A 61 HHIPFYEVDLC-------DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVF 132 (699)
T ss_dssp SCCCEEECCTT-------CHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred CceEEEEcCCC-------CHHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEE
Confidence 56888999999 5555556777 899999999976532 345678999999999999999987 7889999
Q ss_pred eeeceeeccccc-----ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 160 VSTAFVWGEESG-----MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 160 vST~~v~~~~~~-----~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
+||+.+|+.... .++|.. +..+.
T Consensus 133 ~SS~~vyg~~~~~~~~~~~~E~~----------------------------------------------------~~~p~ 160 (699)
T 1z45_A 133 SSSATVYGDATRFPNMIPIPEEC----------------------------------------------------PLGPT 160 (699)
T ss_dssp EEEGGGGCCGGGSTTCCSBCTTS----------------------------------------------------CCCCC
T ss_pred ECcHHHhCCCccccccCCccccC----------------------------------------------------CCCCC
Confidence 999999976421 112211 11456
Q ss_pred chHHHHHHHHHHHHHHh--c--CCCcEEEEeCCceecCCCCCCCcccc--CcCchHHHHHhccCc--eeeEEec------
Q 037479 235 NTYVFTKVMGEMFIEHL--K--ENMSVAIVRPTIITGTYKEPFPGWAE--GIRTIDSLAVGYGKG--RLTCFLG------ 300 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~--~--~~~~~~ivRPs~v~g~~~~p~~gw~~--~~~~~~~~~~~~~~g--~~~~~~~------ 300 (492)
+.|+.||+.+|++++.+ . .+++++|+||+.|||+....+.|--. ........+.....| ....+++
T Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 240 (699)
T 1z45_A 161 NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSR 240 (699)
T ss_dssp SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------C
T ss_pred ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCC
Confidence 89999999999999876 2 68999999999999986432211100 011222334333332 2223344
Q ss_pred CCCcccceeehhhhhhHHHHHHHhhhc---CCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 301 DVKGIVDVIPADMVVNAIVVAVVAHAK---QPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 301 ~~~~~~d~v~vddva~~ii~~~~~~~~---~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++..+++|||+|||++++.++..... .... +++||++++ .++|+.|+++.+.+.+|...
T Consensus 241 ~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~-~~~yni~~~--~~~s~~el~~~i~~~~g~~~ 303 (699)
T 1z45_A 241 DGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGL-CREWNLGSG--KGSTVFEVYHAFCKASGIDL 303 (699)
T ss_dssp CSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCE-EEEEEESCS--CCEEHHHHHHHHHHHHTCCC
T ss_pred CCCeeEeeEEHHHHHHHHHHHHhhhhccccccCC-ceEEEECCC--CCCcHHHHHHHHHHHhCCCC
Confidence 678889999999999999999874321 1111 579999998 88999999999999998754
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.3e-29 Score=241.48 Aligned_cols=225 Identities=20% Similarity=0.219 Sum_probs=175.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
..++|||||||||||++|+++|++.|+ +|++++|+
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~------------------------------------------ 45 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNV---EVIPTDVQ------------------------------------------ 45 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSE---EEEEECTT------------------------------------------
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCC---eEEeccCc------------------------------------------
Confidence 458999999999999999999999985 55787773
Q ss_pred ecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 91 PGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
.+|++ +.+.+..+++ ++|+|||+||....+ +.+...+++|+.|+.+++++|++. ++ +|||+||..+
T Consensus 46 ~~Dl~-------d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v 116 (292)
T 1vl0_A 46 DLDIT-------NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYV 116 (292)
T ss_dssp TCCTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGG
T ss_pred cCCCC-------CHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHe
Confidence 26777 5555556677 799999999976542 456788999999999999999987 56 9999999999
Q ss_pred eccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 166 WGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 166 ~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
|+...+ .++|+.. ..+.+.|+.||+.+
T Consensus 117 ~~~~~~~~~~E~~~----------------------------------------------------~~~~~~Y~~sK~~~ 144 (292)
T 1vl0_A 117 FDGEAKEPITEFDE----------------------------------------------------VNPQSAYGKTKLEG 144 (292)
T ss_dssp SCSCCSSCBCTTSC----------------------------------------------------CCCCSHHHHHHHHH
T ss_pred ECCCCCCCCCCCCC----------------------------------------------------CCCccHHHHHHHHH
Confidence 986432 3333321 14568999999999
Q ss_pred HHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 245 EMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 245 E~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
|++++.+. .+++++||+.|||+ .. + ....++..+..|......+ +...++++++|+|++++.++..
T Consensus 145 E~~~~~~~--~~~~~lR~~~v~G~-~~---~------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~ 210 (292)
T 1vl0_A 145 ENFVKALN--PKYYIVRTAWLYGD-GN---N------FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDE 210 (292)
T ss_dssp HHHHHHHC--SSEEEEEECSEESS-SS---C------HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHH
T ss_pred HHHHHhhC--CCeEEEeeeeeeCC-Cc---C------hHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhc
Confidence 99999864 47999999999998 31 1 1223344444444434444 4678999999999999999875
Q ss_pred hhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 325 HAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. . +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 211 ~---~---~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 241 (292)
T 1vl0_A 211 K---N---YGTFHCTCK--GICSWYDFAVEIFRLTGIDV 241 (292)
T ss_dssp T---C---CEEEECCCB--SCEEHHHHHHHHHHHHCCCC
T ss_pred C---C---CcEEEecCC--CCccHHHHHHHHHHHhCCCC
Confidence 3 2 789999998 88999999999999998653
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-29 Score=245.13 Aligned_cols=259 Identities=16% Similarity=0.187 Sum_probs=168.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe-cCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR-AADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR-~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
||+|||||||||||++|+++|++.|+ +|++++| +.........+. ++ + . ...++.++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~~-~~-------------~----~-~~~~~~~~ 58 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGY---SVNTTIRADPERKRDVSFLT-NL-------------P----G-ASEKLHFF 58 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECCCC----CCCHHHH-TS-------------T----T-HHHHEEEC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCC---EEEEEEeCCccchhHHHHHH-hh-------------h----c-cCCceEEE
Confidence 58999999999999999999999996 4588888 432211111111 00 0 0 01367889
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcch--hHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee-c
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDE--RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW-G 167 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~--~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~-~ 167 (492)
.+|++ +.+.++.+++++|+|||+|+.+.+.. +....+++|+.||.+++++|++.+++++|||+||..++ +
T Consensus 59 ~~Dl~-------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~ 131 (322)
T 2p4h_X 59 NADLS-------NPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSF 131 (322)
T ss_dssp CCCTT-------CGGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSC
T ss_pred ecCCC-------CHHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHccc
Confidence 99999 55556678889999999998764332 23458999999999999999986468899999998744 3
Q ss_pred ccc--cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc-hHHHHHHHH
Q 037479 168 EES--GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN-TYVFTKVMG 244 (492)
Q Consensus 168 ~~~--~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n-~Y~~sK~~a 244 (492)
... ..++|...+ +.+... +..+.+ .|+.||+++
T Consensus 132 ~~~~~~~~~e~~~~-----------~~~~~~---------------------------------~~~p~~~~Y~~sK~~~ 167 (322)
T 2p4h_X 132 NGKDKDVLDESDWS-----------DVDLLR---------------------------------SVKPFGWNYAVSKTLA 167 (322)
T ss_dssp SSSCCSEECTTCCC-----------CHHHHH---------------------------------HHCCTTHHHHHHHHHH
T ss_pred CCCCCeecCCcccc-----------chhhhc---------------------------------ccCcccccHHHHHHHH
Confidence 211 123333211 110000 002223 699999999
Q ss_pred HHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHH
Q 037479 245 EMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAV 322 (492)
Q Consensus 245 E~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~ 322 (492)
|+++.++ ..+++++++||+.|||+...+.. ......+.....|....+ ++ ...++++++|+|++++.++
T Consensus 168 e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~------~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~ 238 (322)
T 2p4h_X 168 EKAVLEFGEQNGIDVVTLILPFIVGRFVCPKL------PDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLL 238 (322)
T ss_dssp HHHHHHHHHHTTCCEEEEEECEEESCCCSSSC------CHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEEcCCceECCCCCCCC------CchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHh
Confidence 9999876 36899999999999999764310 111111111122221111 11 2348999999999999988
Q ss_pred HhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 323 VAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 323 ~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
.. .. . .+.|| +++ .++|+.|+++.+.+.++
T Consensus 239 ~~-~~-~---~g~~~-~~~--~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 239 EN-SV-P---GGRYN-CSP--FIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp HS-CC-C---CEEEE-CCC--EEEEHHHHHHHHHHHCT
T ss_pred hC-cC-C---CCCEE-EcC--CCCCHHHHHHHHHHhCC
Confidence 63 22 1 33599 455 68999999999988764
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-29 Score=248.72 Aligned_cols=261 Identities=17% Similarity=0.199 Sum_probs=169.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|||||||||||++|+++|++.|++ |++++|+.........+. + +. ...+++++.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~---V~~~~r~~~~~~~~~~~~-~---------~~----------~~~~~~~~~ 65 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYA---VNTTVRDPDNQKKVSHLL-E---------LQ----------ELGDLKIFR 65 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCE---EEEEESCTTCTTTTHHHH-H---------HG----------GGSCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCE---EEEEEcCcchhhhHHHHH-h---------cC----------CCCcEEEEe
Confidence 689999999999999999999999974 578888754322111111 0 00 025688999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-h-hHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee-ecc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-E-RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV-WGE 168 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~-~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v-~~~ 168 (492)
+|+++ .+.+..+++++|+|||+||...+. . +....+++|+.||.+++++|++.+++++|||+||+.+ ++.
T Consensus 66 ~Dl~d-------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~ 138 (338)
T 2rh8_A 66 ADLTD-------ELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTIN 138 (338)
T ss_dssp CCTTT-------SSSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHH
T ss_pred cCCCC-------hHHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecC
Confidence 99994 334457778999999999976543 2 2244789999999999999998744899999999773 332
Q ss_pred cc----cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC-chHHHHHHH
Q 037479 169 ES----GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP-NTYVFTKVM 243 (492)
Q Consensus 169 ~~----~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-n~Y~~sK~~ 243 (492)
.. ..++|+.....+ .. .+..++ +.|+.||.+
T Consensus 139 ~~~~~~~~~~E~~~~~~~---------~~-----------------------------------~~~~~~~~~Y~~sK~~ 174 (338)
T 2rh8_A 139 QLDGTGLVVDEKNWTDIE---------FL-----------------------------------TSAKPPTWGYPASKTL 174 (338)
T ss_dssp HHTCSCCCCCTTTTTCC---------------------------------------------------CCCCCCTTSCCH
T ss_pred CcCCCCcccChhhccchh---------hc-----------------------------------cccCCccchHHHHHHH
Confidence 11 134444321100 00 000122 269999999
Q ss_pred HHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC------CCcccceeehhhhh
Q 037479 244 GEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD------VKGIVDVIPADMVV 315 (492)
Q Consensus 244 aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~d~v~vddva 315 (492)
+|++++++ ..+++++++||+.|||+...+.. ......+.....|... ..+. +....++|+|+|||
T Consensus 175 ~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~------~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva 247 (338)
T 2rh8_A 175 AEKAAWKFAEENNIDLITVIPTLMAGSSLTSDV------PSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVC 247 (338)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECEEESCCSSSSC------CHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeCCceECCCCCCCC------CchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHHHH
Confidence 99999876 25899999999999999764311 1101111111122110 0010 11224899999999
Q ss_pred hHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 316 NAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 316 ~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
++++.++... . . ++.|+++++ .+|+.|+++.+.+.++.
T Consensus 248 ~a~~~~~~~~-~-~---~~~~~~~~~---~~s~~e~~~~l~~~~~~ 285 (338)
T 2rh8_A 248 RAHIFVAEKE-S-A---SGRYICCAA---NTSVPELAKFLSKRYPQ 285 (338)
T ss_dssp HHHHHHHHCT-T-C---CEEEEECSE---EECHHHHHHHHHHHCTT
T ss_pred HHHHHHHcCC-C-c---CCcEEEecC---CCCHHHHHHHHHHhCCC
Confidence 9999988632 1 1 457988763 58999999999887653
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=246.00 Aligned_cols=249 Identities=16% Similarity=0.147 Sum_probs=182.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCC--CCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQP--NVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~--~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+|+|||||||||||++|+++|++.|. .+.+|++++|+...... ...++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~----------------------------~~~~~~~ 52 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWH----------------------------EDNPINY 52 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCC----------------------------CSSCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcccc----------------------------ccCceEE
Confidence 57999999999999999999999881 11256999997654220 0257889
Q ss_pred EecCCCCCCCCCCchhhHHHhccC---ccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcc-cceeEE-------
Q 037479 90 VPGDITREDLGVKDSNLREEMWNK---LDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCA-KLIVLV------- 158 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~---vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~V------- 158 (492)
+.+|++ +.+.+..++++ +|+|||+||... .+....+++|+.|+.+++++|++.. ++++||
T Consensus 53 ~~~Dl~-------d~~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i 123 (364)
T 2v6g_A 53 VQCDIS-------DPDDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKH 123 (364)
T ss_dssp EECCTT-------SHHHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHH
T ss_pred EEeecC-------CHHHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceE
Confidence 999999 55556677777 999999999764 4567789999999999999999863 688998
Q ss_pred Eeeeceeecccc---cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 159 HVSTAFVWGEES---GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 159 ~vST~~v~~~~~---~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
|+||..+||... ..++|+... ....+
T Consensus 124 ~~Ss~~vyg~~~~~~~~~~E~~~~---------------------------------------------------~~~~~ 152 (364)
T 2v6g_A 124 YMGPFESYGKIESHDPPYTEDLPR---------------------------------------------------LKYMN 152 (364)
T ss_dssp HHCCGGGTTTSCCCCSSBCTTSCC---------------------------------------------------CSSCC
T ss_pred EEechhhccccccCCCCCCccccC---------------------------------------------------Cccch
Confidence 899999998642 223332110 01256
Q ss_pred hHHHHHHHHHHHHHHhc--CC-CcEEEEeCCceecCCCCCCCccccCcCchHH-HHHhc--cCceeeEEecCC---Cccc
Q 037479 236 TYVFTKVMGEMFIEHLK--EN-MSVAIVRPTIITGTYKEPFPGWAEGIRTIDS-LAVGY--GKGRLTCFLGDV---KGIV 306 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~~--~~-~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~-~~~~~--~~g~~~~~~~~~---~~~~ 306 (492)
.| +.+|+++.++. .+ ++++++||+.|||+...+... ..... ++..+ ..|....+++++ ....
T Consensus 153 ~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~ 223 (364)
T 2v6g_A 153 FY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMN-----LVGTLCVYAAICKHEGKVLRFTGCKAAWDGYS 223 (364)
T ss_dssp HH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSC-----HHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCB
T ss_pred hh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccc-----hHHHHHHHHHHHHhcCCceecCCCcccccccC
Confidence 77 45899888762 45 999999999999988743211 11112 22222 245544556666 4557
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
++++|+|+|++++.++.+... . +++||++++ .++|+.|+++.+.+.+|..+
T Consensus 224 ~~~~v~Dva~a~~~~~~~~~~-~---g~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 274 (364)
T 2v6g_A 224 DCSDADLIAEHHIWAAVDPYA-K---NEAFNVSNG--DVFKWKHFWKVLAEQFGVEC 274 (364)
T ss_dssp CCEEHHHHHHHHHHHHHCGGG-T---TEEEEECCS--CCBCHHHHHHHHHHHHTCCB
T ss_pred CCCcHHHHHHHHHHHHhCCCC-C---CceEEecCC--CcCCHHHHHHHHHHHhCCCC
Confidence 899999999999999874321 2 789999998 78999999999999998754
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=241.27 Aligned_cols=262 Identities=17% Similarity=0.176 Sum_probs=171.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|||||||||||++|+++|++.|+ +|++++|+.........+. .. + . ...+++++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~~----~~----------~----~-~~~~~~~~ 61 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGY---TVRATVRDPTNVKKVKHLL----DL----------P----K-AETHLTLW 61 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCTTCHHHHHHHH----TS----------T----T-HHHHEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC---EEEEEECCcchhHHHHHHH----hc----------c----c-CCCeEEEE
Confidence 578999999999999999999999996 4588888754321111110 00 0 0 01358899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc--hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee-ec
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD--ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV-WG 167 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v-~~ 167 (492)
.+|+++ .+.+..+++++|+|||+||...+. ++....+++|+.||.+++++|++.+++++|||+||+.+ ++
T Consensus 62 ~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~ 134 (337)
T 2c29_D 62 KADLAD-------EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNI 134 (337)
T ss_dssp ECCTTS-------TTTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSC
T ss_pred EcCCCC-------HHHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhccc
Confidence 999994 444557788999999999976543 23346789999999999999998734899999999874 44
Q ss_pred ccc--cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 168 EES--GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 168 ~~~--~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
... ..++|+.+. +.+.... ...+.+.|+.||.++|
T Consensus 135 ~~~~~~~~~E~~~~-----------~~~~~~~--------------------------------~~~~~~~Y~~sK~~~E 171 (337)
T 2c29_D 135 QEHQLPVYDESCWS-----------DMEFCRA--------------------------------KKMTAWMYFVSKTLAE 171 (337)
T ss_dssp SSSCCSEECTTCCC-----------CHHHHHH--------------------------------HCCTTHHHHHHHHHHH
T ss_pred CCCCCcccCcccCC-----------chhhhcc--------------------------------cCCccchHHHHHHHHH
Confidence 321 233443221 1100000 0023457999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
+++.++ ..+++++++||+.|||+...+. +............|... ..+.. ....+++|+|+|++++.++.
T Consensus 172 ~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~------~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~ 243 (337)
T 2c29_D 172 QAAWKYAKENNIDFITIIPTLVVGPFIMSS------MPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYLFE 243 (337)
T ss_dssp HHHHHHHHHHTCCEEEEEECEEESCCSCSS------CCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEeCCceECCCCCCC------CCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHHhc
Confidence 999876 3589999999999999976431 01000000000111110 11111 12349999999999999886
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
.. . . .+.|++++ ..+|+.|+++.+.+.++
T Consensus 244 ~~-~-~---~~~~~~~~---~~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 244 NP-K-A---EGRYICSS---HDCIILDLAKMLREKYP 272 (337)
T ss_dssp CT-T-C---CEEEEECC---EEEEHHHHHHHHHHHCT
T ss_pred Cc-c-c---CceEEEeC---CCCCHHHHHHHHHHHCC
Confidence 32 1 1 45787765 46899999999998774
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=255.25 Aligned_cols=234 Identities=14% Similarity=0.146 Sum_probs=173.1
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|||||||||||++|++.|++.|+ +|++++|+.... ..+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~---~V~~l~R~~~~~-----------------------------------~~v~ 188 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH---EVIQLVRKEPKP-----------------------------------GKRF 188 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSSCCT-----------------------------------TCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCc-----------------------------------ccee
Confidence 68999999999999999999999996 569999976531 1156
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF----DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
+|+.+. . ..+++++|+||||||.... .+....++++|+.||.++++++.+..++++|||+||+++||
T Consensus 189 ~d~~~~-------~--~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg 259 (516)
T 3oh8_A 189 WDPLNP-------A--SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYG 259 (516)
T ss_dssp CCTTSC-------C--TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGC
T ss_pred ecccch-------h--HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEec
Confidence 777631 1 2556799999999997632 24567789999999999999944444889999999999998
Q ss_pred -ccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 168 -EES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 168 -~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
... ..++|... .+.+.|+.+|..+|
T Consensus 260 ~~~~~~~~~E~~~-----------------------------------------------------~~~~~y~~~~~~~E 286 (516)
T 3oh8_A 260 HDRGDEILTEESE-----------------------------------------------------SGDDFLAEVCRDWE 286 (516)
T ss_dssp SEEEEEEECTTSC-----------------------------------------------------CCSSHHHHHHHHHH
T ss_pred CCCCCCccCCCCC-----------------------------------------------------CCcChHHHHHHHHH
Confidence 322 12333221 14578999999999
Q ss_pred HHHHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 246 MFIEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 246 ~~v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
+++... ..+++++|+||+.|||+... ....++..+..|.. ...++++...++|+++|+|++++.++.+
T Consensus 287 ~~~~~~~~~gi~~~ilRp~~v~Gp~~~----------~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~ 355 (516)
T 3oh8_A 287 HATAPASDAGKRVAFIRTGVALSGRGG----------MLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVD 355 (516)
T ss_dssp HTTHHHHHTTCEEEEEEECEEEBTTBS----------HHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCEEEEEeeEEECCCCC----------hHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhC
Confidence 887655 56899999999999998741 22333334444443 3568889999999999999999999874
Q ss_pred hhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 325 HAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.. . .++||++++ +++|+.|+++.+.+.+|+.+
T Consensus 356 ~~--~---~g~~ni~~~--~~~s~~el~~~i~~~~g~~~ 387 (516)
T 3oh8_A 356 AQ--I---SGPINAVAP--NPVSNADMTKILATSMHRPA 387 (516)
T ss_dssp TT--C---CEEEEESCS--CCEEHHHHHHHTTC------
T ss_pred cc--c---CCcEEEECC--CCCCHHHHHHHHHHHhCCCC
Confidence 32 1 568999998 89999999999999888654
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.95 E-value=7.8e-28 Score=233.06 Aligned_cols=219 Identities=16% Similarity=0.242 Sum_probs=169.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh--CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 13 KTILVTGATGFLAKIFVEKILRV--QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~--g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
|+|||||||||||++++++|++. |+ +|++++|+.... +.+. ..+++++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~---~~l~------------------------~~~~~~~ 50 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS---QIIAIVRNVEKA---STLA------------------------DQGVEVR 50 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG---GEEEEESCTTTT---HHHH------------------------HTTCEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC---eEEEEEcCHHHH---hHHh------------------------hcCCeEE
Confidence 57999999999999999999998 75 458999975432 1111 1568899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.+|++ +.+.+..+++++|+|||+||.. ..+ ++|+.++.+++++|++. ++++|||+||.+++.
T Consensus 51 ~~D~~-------d~~~l~~~~~~~d~vi~~a~~~-~~~------~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~--- 112 (287)
T 2jl1_A 51 HGDYN-------QPESLQKAFAGVSKLLFISGPH-YDN------TLLIVQHANVVKAARDA-GVKHIAYTGYAFAEE--- 112 (287)
T ss_dssp ECCTT-------CHHHHHHHTTTCSEEEECCCCC-SCH------HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGG---
T ss_pred EeccC-------CHHHHHHHHhcCCEEEEcCCCC-cCc------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC---
Confidence 99999 5566668889999999999963 221 67999999999999987 789999999987641
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
.+..|+.+|..+|+++++
T Consensus 113 --------------------------------------------------------------~~~~y~~~K~~~E~~~~~ 130 (287)
T 2jl1_A 113 --------------------------------------------------------------SIIPLAHVHLATEYAIRT 130 (287)
T ss_dssp --------------------------------------------------------------CCSTHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCCchHHHHHHHHHHHHH
Confidence 124799999999999986
Q ss_pred hcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCC
Q 037479 251 LKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPS 330 (492)
Q Consensus 251 ~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~ 330 (492)
.+++++++||+.++|+.. ..++ ...+ ..|.. ....++...++++++|+|++++.++.+. ...
T Consensus 131 --~~~~~~ilrp~~~~~~~~---~~~~------~~~~---~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~-~~~- 192 (287)
T 2jl1_A 131 --TNIPYTFLRNALYTDFFV---NEGL------RAST---ESGAI--VTNAGSGIVNSVTRNELALAAATVLTEE-GHE- 192 (287)
T ss_dssp --TTCCEEEEEECCBHHHHS---SGGG------HHHH---HHTEE--EESCTTCCBCCBCHHHHHHHHHHHHTSS-SCT-
T ss_pred --cCCCeEEEECCEeccccc---hhhH------HHHh---hCCce--eccCCCCccCccCHHHHHHHHHHHhcCC-CCC-
Confidence 689999999998887531 1111 1111 12333 2345677889999999999999998742 222
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 331 DVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 331 ~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++||++++ .++|+.|+++.+.+.+|+..
T Consensus 193 --g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 221 (287)
T 2jl1_A 193 --NKTYNLVSN--QPWTFDELAQILSEVSGKKV 221 (287)
T ss_dssp --TEEEEECCS--SCBCHHHHHHHHHHHHSSCC
T ss_pred --CcEEEecCC--CcCCHHHHHHHHHHHHCCcc
Confidence 789999998 78999999999999998753
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=247.99 Aligned_cols=215 Identities=18% Similarity=0.170 Sum_probs=172.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|+++|+ ++++.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~-------------------------------------------------~~v~~~ 31 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD-------------------------------------------------HHIFEV 31 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-------------------------------------------------CEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-------------------------------------------------CEEEEE
Confidence 6899999999999999999999885 122344
Q ss_pred CC-CCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccce-eEEEeeeceeecccc
Q 037479 93 DI-TREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLI-VLVHVSTAFVWGEES 170 (492)
Q Consensus 93 Dl-~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~V~vST~~v~~~~~ 170 (492)
|+ + +.+.+..+++++|+|||+||..... .....+++|+.++.+++++|++. +++ +|||+||.++++
T Consensus 32 d~~~-------d~~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~--- 99 (369)
T 3st7_A 32 HRQT-------KEEELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ--- 99 (369)
T ss_dssp CTTC-------CHHHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS---
T ss_pred CCCC-------CHHHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC---
Confidence 55 3 5555667888999999999987643 44557889999999999999998 666 999999988774
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
.+.|+.||+.+|+++++
T Consensus 100 ---------------------------------------------------------------~~~Y~~sK~~~E~~~~~ 116 (369)
T 3st7_A 100 ---------------------------------------------------------------DNPYGESKLQGEQLLRE 116 (369)
T ss_dssp ---------------------------------------------------------------CSHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------CCCchHHHHHHHHHHHH
Confidence 26899999999999988
Q ss_pred h--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcC
Q 037479 251 L--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 251 ~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~ 328 (492)
+ ..+++++++||+.|||+...|..+ .....++..+..|.... .++++..+++||+||+|++++.++......
T Consensus 117 ~~~~~g~~~~i~R~~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~ 190 (369)
T 3st7_A 117 YAEEYGNTVYIYRWPNLFGKWCKPNYN-----SVIATFCYKIARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTPTI 190 (369)
T ss_dssp HHHHHCCCEEEEEECEEECTTCCTTSS-----CHHHHHHHHHHTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCCCE
T ss_pred HHHHhCCCEEEEECCceeCCCCCCCcc-----hHHHHHHHHHHcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCccc
Confidence 6 358999999999999998765211 23445555566665433 357888999999999999999999853321
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 329 PSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 329 ~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
. +++||++++ .++|+.|+++.+.+.+|..
T Consensus 191 ~---~~~~~i~~~--~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 191 E---NGVPTVPNV--FKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp E---TTEECCSCC--EEEEHHHHHHHHHHHHHHH
T ss_pred C---CceEEeCCC--CceeHHHHHHHHHHHhCCC
Confidence 1 579999998 8999999999999998875
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.9e-28 Score=226.03 Aligned_cols=218 Identities=14% Similarity=0.187 Sum_probs=165.2
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.-+++|+|||||||||||++++++|+++|+ +|++++|+.... +.+. ..++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~---~V~~~~R~~~~~---~~~~------------------------~~~~ 66 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGH---EPVAMVRNEEQG---PELR------------------------ERGA 66 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSGGGH---HHHH------------------------HTTC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCC---eEEEEECChHHH---HHHH------------------------hCCC
Confidence 346899999999999999999999999996 568999975431 1111 2578
Q ss_pred -EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 88 -TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 88 -~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+++.+|++ . + +..+++++|+|||+||.... +.+...+++|+.|+.+++++|++. ++++||++||....
T Consensus 67 ~~~~~~Dl~-~-------~-~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~ 135 (236)
T 3e8x_A 67 SDIVVANLE-E-------D-FSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTV 135 (236)
T ss_dssp SEEEECCTT-S-------C-CGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCS
T ss_pred ceEEEcccH-H-------H-HHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCC
Confidence 89999998 1 1 23666899999999997654 457788999999999999999987 78999999994433
Q ss_pred cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 167 GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 167 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
... ... .+.+.|+.||+.+|+
T Consensus 136 ~~~------~~~-----------------------------------------------------~~~~~Y~~sK~~~e~ 156 (236)
T 3e8x_A 136 DPD------QGP-----------------------------------------------------MNMRHYLVAKRLADD 156 (236)
T ss_dssp CGG------GSC-----------------------------------------------------GGGHHHHHHHHHHHH
T ss_pred CCC------CCh-----------------------------------------------------hhhhhHHHHHHHHHH
Confidence 211 000 134689999999999
Q ss_pred HHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 247 FIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 247 ~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
++++ .+++++++||+.|+|+.... .. ....+.....++++++|+|++++.++.+..
T Consensus 157 ~~~~--~gi~~~~lrpg~v~~~~~~~---------------------~~-~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~ 212 (236)
T 3e8x_A 157 ELKR--SSLDYTIVRPGPLSNEESTG---------------------KV-TVSPHFSEITRSITRHDVAKVIAELVDQQH 212 (236)
T ss_dssp HHHH--SSSEEEEEEECSEECSCCCS---------------------EE-EEESSCSCCCCCEEHHHHHHHHHHHTTCGG
T ss_pred HHHH--CCCCEEEEeCCcccCCCCCC---------------------eE-EeccCCCcccCcEeHHHHHHHHHHHhcCcc
Confidence 9985 78999999999999975421 11 122344556799999999999999987532
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHH
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAY 356 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~ 356 (492)
.. +++||++++ ++++.|+++.+.
T Consensus 213 -~~---g~~~~v~~~---~~~~~e~~~~i~ 235 (236)
T 3e8x_A 213 -TI---GKTFEVLNG---DTPIAKVVEQLG 235 (236)
T ss_dssp -GT---TEEEEEEEC---SEEHHHHHHTC-
T ss_pred -cc---CCeEEEeCC---CcCHHHHHHHhc
Confidence 22 789999986 489999987653
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=220.60 Aligned_cols=209 Identities=14% Similarity=0.234 Sum_probs=163.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++++++|++.|+ +|+++.|+...... ..+++++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~-----------------------------~~~~~~~~~ 48 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDY---QIYAGARKVEQVPQ-----------------------------YNNVKAVHF 48 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSC---EEEEEESSGGGSCC-----------------------------CTTEEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCccchhh-----------------------------cCCceEEEe
Confidence 5899999999999999999999995 56999997543210 157899999
Q ss_pred CCCCCCCCCCc-hhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccc
Q 037479 93 DITREDLGVKD-SNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESG 171 (492)
Q Consensus 93 Dl~~~~lgl~~-~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~ 171 (492)
|++ + .+.+..+++++|+|||+||.... ..+++|+.|+.+++++|++. ++++||++||.++++...
T Consensus 49 D~~-------d~~~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~- 114 (219)
T 3dqp_A 49 DVD-------WTPEEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPEK- 114 (219)
T ss_dssp CTT-------SCHHHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGGG-
T ss_pred ccc-------CCHHHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCCc-
Confidence 999 5 66677888999999999997652 25788999999999999987 789999999987765321
Q ss_pred ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh
Q 037479 172 MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL 251 (492)
Q Consensus 172 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 251 (492)
..|. + ..+.+.|+.+|+.+|++++ .
T Consensus 115 -~~e~--~---------------------------------------------------~~~~~~Y~~sK~~~e~~~~-~ 139 (219)
T 3dqp_A 115 -WIGA--G---------------------------------------------------FDALKDYYIAKHFADLYLT-K 139 (219)
T ss_dssp -CCSH--H---------------------------------------------------HHHTHHHHHHHHHHHHHHH-H
T ss_pred -cccc--c---------------------------------------------------cccccHHHHHHHHHHHHHH-h
Confidence 1110 0 0246799999999999996 2
Q ss_pred cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCC
Q 037479 252 KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSD 331 (492)
Q Consensus 252 ~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~ 331 (492)
..+++++++||+.++|+.... ... . ++...++++++|+|++++.++.+.. ..
T Consensus 140 ~~~i~~~ilrp~~v~g~~~~~---------------------~~~--~--~~~~~~~i~~~Dva~~i~~~l~~~~-~~-- 191 (219)
T 3dqp_A 140 ETNLDYTIIQPGALTEEEATG---------------------LID--I--NDEVSASNTIGDVADTIKELVMTDH-SI-- 191 (219)
T ss_dssp SCCCEEEEEEECSEECSCCCS---------------------EEE--E--SSSCCCCEEHHHHHHHHHHHHTCGG-GT--
T ss_pred ccCCcEEEEeCceEecCCCCC---------------------ccc--c--CCCcCCcccHHHHHHHHHHHHhCcc-cc--
Confidence 478999999999999975421 111 1 2567799999999999999997533 22
Q ss_pred CCcEEEecCCCCCcccHHHHHHH
Q 037479 332 VNNIYQVGSSLRNPLIYTNLQDY 354 (492)
Q Consensus 332 ~~~iy~i~~~~~~~~t~~e~~~~ 354 (492)
+++||++++ +.+++|+.+.
T Consensus 192 -g~~~~i~~g---~~~~~e~~~~ 210 (219)
T 3dqp_A 192 -GKVISMHNG---KTAIKEALES 210 (219)
T ss_dssp -TEEEEEEEC---SEEHHHHHHT
T ss_pred -CcEEEeCCC---CccHHHHHHH
Confidence 789999886 4888888653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=223.03 Aligned_cols=224 Identities=22% Similarity=0.232 Sum_probs=171.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++++++|++ |+ +|+++.|+.... ++ +.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~---~V~~~~r~~~~~--------------------------------~~---~~~ 41 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RH---EVIKVYNSSEIQ--------------------------------GG---YKL 41 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TS---CEEEEESSSCCT--------------------------------TC---EEC
T ss_pred CEEEEECCCChhHHHHHHHHhc-CC---eEEEecCCCcCC--------------------------------CC---cee
Confidence 5799999999999999999995 75 568999975310 11 789
Q ss_pred CCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+....++++ +|+|||+||..... +.+...+++|+.|+.+++++|++. +. +|||+||..+++
T Consensus 42 Dl~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~ 112 (273)
T 2ggs_A 42 DLT-------DFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFD 112 (273)
T ss_dssp CTT-------SHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSC
T ss_pred ccC-------CHHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEc
Confidence 998 55555566665 99999999987643 467788999999999999999987 55 899999999987
Q ss_pred ccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 168 EESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 168 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
...+.+.|+..+ .+.+.|+.||+.+|++
T Consensus 113 ~~~~~~~e~~~~----------------------------------------------------~~~~~Y~~sK~~~e~~ 140 (273)
T 2ggs_A 113 GEKGNYKEEDIP----------------------------------------------------NPINYYGLSKLLGETF 140 (273)
T ss_dssp SSSCSBCTTSCC----------------------------------------------------CCSSHHHHHHHHHHHH
T ss_pred CCCCCcCCCCCC----------------------------------------------------CCCCHHHHHHHHHHHH
Confidence 654434443211 3568999999999999
Q ss_pred HHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhc
Q 037479 248 IEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAK 327 (492)
Q Consensus 248 v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~ 327 (492)
++. ++++++||+.|||+ . .....++.....|......++ ..++++++|+|++++.++.+..
T Consensus 141 ~~~----~~~~~iR~~~v~G~--~---------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~- 201 (273)
T 2ggs_A 141 ALQ----DDSLIIRTSGIFRN--K---------GFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK- 201 (273)
T ss_dssp HCC----TTCEEEEECCCBSS--S---------SHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC-
T ss_pred HhC----CCeEEEeccccccc--c---------HHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc-
Confidence 876 78899999999971 1 112233334445544444443 7799999999999999987431
Q ss_pred CCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 328 QPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 328 ~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.++||+++ .++|+.|+++.+.+.+|..+
T Consensus 202 -----~g~~~i~~---~~~s~~e~~~~~~~~~g~~~ 229 (273)
T 2ggs_A 202 -----TGIIHVAG---ERISRFELALKIKEKFNLPG 229 (273)
T ss_dssp -----CEEEECCC---CCEEHHHHHHHHHHHTTCCS
T ss_pred -----CCeEEECC---CcccHHHHHHHHHHHhCCCh
Confidence 45999987 57999999999999998764
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-27 Score=225.39 Aligned_cols=222 Identities=19% Similarity=0.168 Sum_probs=170.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|+|||||||||||++++++|++.|+ +|+++.|+..... ..++++
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~---~V~~~~r~~~~~~------------------------------~~~~~~ 47 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAE---ILRLADLSPLDPA------------------------------GPNEEC 47 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEE---EEEEEESSCCCCC------------------------------CTTEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCC---EEEEEecCCcccc------------------------------CCCCEE
Confidence 3568999999999999999999999995 5689999765422 267899
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
+.+|++ +.+.+..+++++|+|||+||.. ..++++..+++|+.|+.+++++|++. +.++||++||..+++..
T Consensus 48 ~~~Dl~-------d~~~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~ 118 (267)
T 3rft_A 48 VQCDLA-------DANAVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYY 118 (267)
T ss_dssp EECCTT-------CHHHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTS
T ss_pred EEcCCC-------CHHHHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCC
Confidence 999999 6666778889999999999974 34567889999999999999999987 78899999999998743
Q ss_pred c--cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 170 S--GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 170 ~--~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
. ..++|+. +..+.+.|+.||+.+|.+
T Consensus 119 ~~~~~~~e~~----------------------------------------------------~~~~~~~Y~~sK~~~e~~ 146 (267)
T 3rft_A 119 PQTERLGPDV----------------------------------------------------PARPDGLYGVSKCFGENL 146 (267)
T ss_dssp BTTSCBCTTS----------------------------------------------------CCCCCSHHHHHHHHHHHH
T ss_pred CCCCCCCCCC----------------------------------------------------CCCCCChHHHHHHHHHHH
Confidence 2 1222221 114568999999999999
Q ss_pred HHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 248 IEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 248 v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
++.+ ..+++++++||+.|+|+.. ++....++++++|+++++..++...
T Consensus 147 ~~~~a~~~g~~~~~vr~~~v~~~~~------------------------------~~~~~~~~~~~~d~a~~~~~~~~~~ 196 (267)
T 3rft_A 147 ARMYFDKFGQETALVRIGSCTPEPN------------------------------NYRMLSTWFSHDDFVSLIEAVFRAP 196 (267)
T ss_dssp HHHHHHHHCCCEEEEEECBCSSSCC------------------------------STTHHHHBCCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHhCCeEEEEEeecccCCCC------------------------------CCCceeeEEcHHHHHHHHHHHHhCC
Confidence 9866 4589999999999998632 2334457899999999998888732
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. .. ..++++.++ ++.+|.++... +.+|..|
T Consensus 197 ~--~~--~~~~~~~s~--~~~~~~~~~~~--~~~g~~p 226 (267)
T 3rft_A 197 V--LG--CPVVWGASA--NDAGWWDNSHL--GFLGWKP 226 (267)
T ss_dssp C--CC--SCEEEECCC--CTTCCBCCGGG--GGGCCCC
T ss_pred C--CC--ceEEEEeCC--CCCCcccChhH--HHCCCCC
Confidence 2 21 457777777 67777666433 3445443
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=230.23 Aligned_cols=236 Identities=14% Similarity=0.112 Sum_probs=172.4
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC-HHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS-ATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~-~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.|++|+|||||||||+|++|++.|++.|+ +|++++|+..... ..+++. .+...++
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~~~~~~~~~~~~---------------------~l~~~~v 62 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDAHR---PTYILARPGPRSPSKAKIFK---------------------ALEDKGA 62 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHTTC---CEEEEECSSCCCHHHHHHHH---------------------HHHHTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCC---CEEEEECCCCCChhHHHHHH---------------------HHHhCCc
Confidence 36678999999999999999999999986 4599999864321 111111 0112688
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
+++.+|++ +.+.+..+++ ++|+|||+||.. |+.++.+++++|++.+++++||+ | +
T Consensus 63 ~~~~~Dl~-------d~~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~-S---~ 119 (346)
T 3i6i_A 63 IIVYGLIN-------EQEAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP-S---E 119 (346)
T ss_dssp EEEECCTT-------CHHHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC-S---C
T ss_pred EEEEeecC-------CHHHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee-c---c
Confidence 99999999 6666678888 999999999962 89999999999999833999986 4 3
Q ss_pred ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 166 WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 166 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
+|.. ++|.. +..+.+.|+.+|+.+|
T Consensus 120 ~g~~---~~e~~----------------------------------------------------~~~p~~~y~~sK~~~e 144 (346)
T 3i6i_A 120 FGHD---VNRAD----------------------------------------------------PVEPGLNMYREKRRVR 144 (346)
T ss_dssp CSSC---TTTCC----------------------------------------------------CCTTHHHHHHHHHHHH
T ss_pred cCCC---CCccC----------------------------------------------------cCCCcchHHHHHHHHH
Confidence 3321 11110 0134578999999999
Q ss_pred HHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 246 MFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 246 ~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
+++++ .+++++++||+.++|..... +.. .......+....++++++...++|+++|+|++++.++...
T Consensus 145 ~~l~~--~g~~~tivrpg~~~g~~~~~---~~~-------~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~ 212 (346)
T 3i6i_A 145 QLVEE--SGIPFTYICCNSIASWPYYN---NIH-------PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDV 212 (346)
T ss_dssp HHHHH--TTCCBEEEECCEESSCCCSC---C------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCG
T ss_pred HHHHH--cCCCEEEEEecccccccCcc---ccc-------cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCc
Confidence 99988 68999999999999965421 111 1111223334467889999999999999999999998753
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. .. +++|+++++ .+++|+.|+++.+.+.+|+..
T Consensus 213 ~-~~---~~~~~i~g~-~~~~s~~e~~~~~~~~~g~~~ 245 (346)
T 3i6i_A 213 R-TL---NKSVHFRPS-CNCLNINELASVWEKKIGRTL 245 (346)
T ss_dssp G-GT---TEEEECCCG-GGEECHHHHHHHHHHHHTSCC
T ss_pred c-cc---CeEEEEeCC-CCCCCHHHHHHHHHHHHCCCC
Confidence 2 22 678988742 178999999999999999764
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-27 Score=226.74 Aligned_cols=219 Identities=16% Similarity=0.160 Sum_probs=170.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|+ +|+++.|+..... ..++.++.+
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~------------------------------~~~~~~~~~ 49 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAH---EVRLSDIVDLGAA------------------------------EAHEEIVAC 49 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEE---EEEECCSSCCCCC------------------------------CTTEEECCC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCCCcccc------------------------------CCCccEEEc
Confidence 6899999999999999999999985 5689999754311 145788999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc--
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES-- 170 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~-- 170 (492)
|++ +.+.+..+++++|+|||+||... .+.+...+++|+.|+.+++++|++. ++++|||+||..+++...
T Consensus 50 Dl~-------d~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~~ 120 (267)
T 3ay3_A 50 DLA-------DAQAVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPRT 120 (267)
T ss_dssp CTT-------CHHHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBTT
T ss_pred cCC-------CHHHHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCCC
Confidence 999 55656688889999999999763 3456788999999999999999987 788999999999987532
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
..++|+. +..+.+.|+.||+.+|++++.
T Consensus 121 ~~~~E~~----------------------------------------------------~~~~~~~Y~~sK~~~e~~~~~ 148 (267)
T 3ay3_A 121 TRIDTEV----------------------------------------------------PRRPDSLYGLSKCFGEDLASL 148 (267)
T ss_dssp SCBCTTS----------------------------------------------------CCCCCSHHHHHHHHHHHHHHH
T ss_pred CCCCCCC----------------------------------------------------CCCCCChHHHHHHHHHHHHHH
Confidence 1233321 114568999999999999987
Q ss_pred h--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcC
Q 037479 251 L--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 251 ~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~ 328 (492)
+ ..+++++++||+.||+. |. ++....++++++|+|++++.++... .
T Consensus 149 ~~~~~gi~~~~lrp~~v~~~---~~---------------------------~~~~~~~~~~~~dva~~~~~~~~~~-~- 196 (267)
T 3ay3_A 149 YYHKFDIETLNIRIGSCFPK---PK---------------------------DARMMATWLSVDDFMRLMKRAFVAP-K- 196 (267)
T ss_dssp HHHTTCCCEEEEEECBCSSS---CC---------------------------SHHHHHHBCCHHHHHHHHHHHHHSS-C-
T ss_pred HHHHcCCCEEEEeceeecCC---CC---------------------------CCCeeeccccHHHHHHHHHHHHhCC-C-
Confidence 6 46899999999999842 10 1122457899999999999988742 2
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 329 PSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 329 ~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.. ..+|++.++ .+.++.++.+. +.+|..|
T Consensus 197 ~~--~~~~~~~~~--~~~~~~d~~~~--~~lg~~p 225 (267)
T 3ay3_A 197 LG--CTVVYGASA--NTESWWDNDKS--AFLGWVP 225 (267)
T ss_dssp CC--EEEEEECCS--CSSCCBCCGGG--GGGCCCC
T ss_pred CC--ceeEecCCC--ccccccCHHHH--HHcCCCC
Confidence 11 478998887 67788888776 6667554
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=224.08 Aligned_cols=214 Identities=13% Similarity=0.179 Sum_probs=161.8
Q ss_pred EEEEeCCcchhhHHHHHHHHhh--CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 14 TILVTGATGFLAKIFVEKILRV--QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~--g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|||||||||||++++++|++. |+ +|++++|+..... .+. ..++.++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~~---~~~------------------------~~~~~~~~ 50 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS---QIVAIVRNPAKAQ---ALA------------------------AQGITVRQ 50 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG---GEEEEESCTTTCH---HHH------------------------HTTCEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc---eEEEEEcChHhhh---hhh------------------------cCCCeEEE
Confidence 5899999999999999999998 75 4589999754321 111 15678999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESG 171 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~ 171 (492)
+|++ +.+.+..+++++|+|||+|+.. ...|+.++.+++++|++. ++++|||+||..++.
T Consensus 51 ~D~~-------d~~~~~~~~~~~d~vi~~a~~~---------~~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~---- 109 (286)
T 2zcu_A 51 ADYG-------DEAALTSALQGVEKLLLISSSE---------VGQRAPQHRNVINAAKAA-GVKFIAYTSLLHADT---- 109 (286)
T ss_dssp CCTT-------CHHHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTTT----
T ss_pred cCCC-------CHHHHHHHHhCCCEEEEeCCCC---------chHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC----
Confidence 9999 5566678889999999999852 125889999999999987 789999999976651
Q ss_pred ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh
Q 037479 172 MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL 251 (492)
Q Consensus 172 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 251 (492)
.+..|+.+|..+|+++++
T Consensus 110 -------------------------------------------------------------~~~~y~~sK~~~e~~~~~- 127 (286)
T 2zcu_A 110 -------------------------------------------------------------SPLGLADEHIETEKMLAD- 127 (286)
T ss_dssp -------------------------------------------------------------CCSTTHHHHHHHHHHHHH-
T ss_pred -------------------------------------------------------------CcchhHHHHHHHHHHHHH-
Confidence 124799999999999987
Q ss_pred cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCC
Q 037479 252 KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSD 331 (492)
Q Consensus 252 ~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~ 331 (492)
.+++++++||+.++++.. .+ ....+ ..|.. ..++++...++++++|+|++++.++.+.. ..
T Consensus 128 -~~~~~~ilrp~~~~~~~~----~~------~~~~~---~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~-- 188 (286)
T 2zcu_A 128 -SGIVYTLLRNGWYSENYL----AS------APAAL---EHGVF--IGAAGDGKIASATRADYAAAAARVISEAG-HE-- 188 (286)
T ss_dssp -HCSEEEEEEECCBHHHHH----TT------HHHHH---HHTEE--EESCTTCCBCCBCHHHHHHHHHHHHHSSS-CT--
T ss_pred -cCCCeEEEeChHHhhhhH----HH------hHHhh---cCCce--eccCCCCccccccHHHHHHHHHHHhcCCC-CC--
Confidence 589999999987766421 11 11111 12333 24566788999999999999999987422 22
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 332 VNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 332 ~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+++||++++ .++|+.|+++.+.+.+|+.
T Consensus 189 -g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 216 (286)
T 2zcu_A 189 -GKVYELAGD--SAWTLTQLAAELTKQSGKQ 216 (286)
T ss_dssp -TCEEEECCS--SCBCHHHHHHHHHHHHSSC
T ss_pred -CceEEEeCC--CcCCHHHHHHHHHHHHCCC
Confidence 789999998 7899999999999999875
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-25 Score=215.32 Aligned_cols=217 Identities=10% Similarity=0.079 Sum_probs=161.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
|+|||||||||||++++++|++. |+ +|++++|+...... ....+++++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~---~V~~~~R~~~~~~~---------------------------~~~~~v~~~~ 50 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHID---HFHIGVRNVEKVPD---------------------------DWRGKVSVRQ 50 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCT---TEEEEESSGGGSCG---------------------------GGBTTBEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCC---cEEEEECCHHHHHH---------------------------hhhCCCEEEE
Confidence 57999999999999999999887 75 45899997643221 1136789999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESG 171 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~ 171 (492)
+|++ +.+.+..+++++|+|||+|+..... ..|+.++++++++|++. ++++|||+||... ..
T Consensus 51 ~D~~-------d~~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~---~~- 111 (289)
T 3e48_A 51 LDYF-------NQESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYYAD---QH- 111 (289)
T ss_dssp CCTT-------CHHHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEESCC---ST-
T ss_pred cCCC-------CHHHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEcccCC---CC-
Confidence 9999 6666778899999999999976432 34899999999999998 7999999999431 11
Q ss_pred ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh
Q 037479 172 MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL 251 (492)
Q Consensus 172 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 251 (492)
..+..+...+..+|+.+.+
T Consensus 112 ------------------------------------------------------------~~~~~~~~~~~~~e~~~~~- 130 (289)
T 3e48_A 112 ------------------------------------------------------------NNPFHMSPYFGYASRLLST- 130 (289)
T ss_dssp ------------------------------------------------------------TCCSTTHHHHHHHHHHHHH-
T ss_pred ------------------------------------------------------------CCCCccchhHHHHHHHHHH-
Confidence 0011122223456666665
Q ss_pred cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc-CceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCC
Q 037479 252 KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG-KGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPS 330 (492)
Q Consensus 252 ~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~ 330 (492)
.+++++++||+.++|+.. ..+.... .+. ...+.++...++|+++|+|++++.++..... .
T Consensus 131 -~g~~~~ilrp~~~~~~~~--------------~~~~~~~~~~~--~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~-~- 191 (289)
T 3e48_A 131 -SGIDYTYVRMAMYMDPLK--------------PYLPELMNMHK--LIYPAGDGRINYITRNDIARGVIAIIKNPDT-W- 191 (289)
T ss_dssp -HCCEEEEEEECEESTTHH--------------HHHHHHHHHTE--ECCCCTTCEEEEECHHHHHHHHHHHHHCGGG-T-
T ss_pred -cCCCEEEEeccccccccH--------------HHHHHHHHCCC--EecCCCCceeeeEEHHHHHHHHHHHHcCCCc-C-
Confidence 689999999999998532 1111111 222 2345577889999999999999999885432 2
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 331 DVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 331 ~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++||++ + .++|+.|+++.+.+.+|+..
T Consensus 192 --g~~~~~~-~--~~~s~~e~~~~~~~~~g~~~ 219 (289)
T 3e48_A 192 --GKRYLLS-G--YSYDMKELAAILSEASGTEI 219 (289)
T ss_dssp --TCEEEEC-C--EEEEHHHHHHHHHHHHTSCC
T ss_pred --CceEEeC-C--CcCCHHHHHHHHHHHHCCce
Confidence 6799999 8 89999999999999999753
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=216.47 Aligned_cols=231 Identities=12% Similarity=0.035 Sum_probs=171.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhC-CCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQ-PNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g-~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+|+|||||||||+|++++++|++.| + +|++++|+..... .+.+. ..+++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~---~V~~~~R~~~~~~-~~~l~------------------------~~~~~~~ 56 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF---KVRVVTRNPRKKA-AKELR------------------------LQGAEVV 56 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS---EEEEEESCTTSHH-HHHHH------------------------HTTCEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc---eEEEEEcCCCCHH-HHHHH------------------------HCCCEEE
Confidence 5899999999999999999999988 5 5689999765321 11111 2568899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.+|++ +.+.+..+++++|+|||+|+..... ..+.|+.++.+++++|++. ++++||++||..+++...
T Consensus 57 ~~D~~-------d~~~l~~~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~~ 123 (299)
T 2wm3_A 57 QGDQD-------DQVIMELALNGAYATFIVTNYWESC-----SQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLTA 123 (299)
T ss_dssp ECCTT-------CHHHHHHHHTTCSEEEECCCHHHHT-----CHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHTT
T ss_pred EecCC-------CHHHHHHHHhcCCEEEEeCCCCccc-----cchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccCC
Confidence 99999 5666678889999999999853211 2456889999999999987 789999988876664321
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
+ .+++.|..+|..+|+++++
T Consensus 124 ~------------------------------------------------------------~~~~~y~~sK~~~e~~~~~ 143 (299)
T 2wm3_A 124 G------------------------------------------------------------RLAAAHFDGKGEVEEYFRD 143 (299)
T ss_dssp T------------------------------------------------------------SCCCHHHHHHHHHHHHHHH
T ss_pred C------------------------------------------------------------cccCchhhHHHHHHHHHHH
Confidence 0 2357899999999999987
Q ss_pred hcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee-eEEecCCCcccceeehhhhhhHHHHHHHhhhcCC
Q 037479 251 LKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL-TCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQP 329 (492)
Q Consensus 251 ~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~ 329 (492)
.+++++++||+.++|+... .|... ....|.. ......++...++|+++|+|++++.++.......
T Consensus 144 --~gi~~~ilrp~~~~~~~~~---~~~~~---------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~ 209 (299)
T 2wm3_A 144 --IGVPMTSVRLPCYFENLLS---HFLPQ---------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYV 209 (299)
T ss_dssp --HTCCEEEEECCEEGGGGGT---TTCCE---------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHT
T ss_pred --CCCCEEEEeecHHhhhchh---hcCCc---------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhC
Confidence 5899999999999996432 11111 0112211 1112236678899999999999999987432112
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 330 SDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 330 ~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++|++++ .++|+.|+++.+.+.+|+..
T Consensus 210 ---g~~~~~~g---~~~s~~e~~~~~~~~~g~~~ 237 (299)
T 2wm3_A 210 ---GQNIGLST---CRHTAEEYAALLTKHTRKVV 237 (299)
T ss_dssp ---TCEEECCS---EEECHHHHHHHHHHHHSSCE
T ss_pred ---CeEEEeee---ccCCHHHHHHHHHHHHCCCc
Confidence 67999986 47999999999999998753
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-26 Score=211.32 Aligned_cols=215 Identities=12% Similarity=-0.005 Sum_probs=149.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++++++|+++|+ +|++++|+... +. .....+++++.+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~------~~---------------------~~~~~~~~~~~~ 50 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH---EVLAVVRDPQK------AA---------------------DRLGATVATLVK 50 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH------HH---------------------HHTCTTSEEEEC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC---EEEEEEecccc------cc---------------------cccCCCceEEec
Confidence 5799999999999999999999996 56899996421 11 001267899999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccc-
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESG- 171 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~- 171 (492)
|++++ +. ..++++|+|||+||...... ..++|+.++++++++|++. + ++||++||+.++....+
T Consensus 51 D~~d~-------~~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~ 115 (224)
T 3h2s_A 51 EPLVL-------TE--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGAD 115 (224)
T ss_dssp CGGGC-------CH--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCS
T ss_pred ccccc-------cH--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCC
Confidence 99953 33 56689999999999862211 2467999999999999998 5 89999999765543221
Q ss_pred ---ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 172 ---MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 172 ---~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
..+|...+ .+.+.|+.+|+.+|.+.
T Consensus 116 ~~~~~~~~~~~----------------------------------------------------~~~~~y~~sK~~~e~~~ 143 (224)
T 3h2s_A 116 HPMILDFPESA----------------------------------------------------ASQPWYDGALYQYYEYQ 143 (224)
T ss_dssp SCGGGGCCGGG----------------------------------------------------GGSTTHHHHHHHHHHHH
T ss_pred ccccccCCCCC----------------------------------------------------ccchhhHHHHHHHHHHH
Confidence 11111111 24678999999999653
Q ss_pred HHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhc
Q 037479 249 EHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAK 327 (492)
Q Consensus 249 ~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~ 327 (492)
... ..+++++++||+.|+|+.. ..++.. ... .+ ..+....++|+++|+|++++.++.+. .
T Consensus 144 ~~~~~~~i~~~ivrp~~v~g~~~--~~~~~~------------~~~---~~-~~~~~~~~~i~~~DvA~~~~~~l~~~-~ 204 (224)
T 3h2s_A 144 FLQMNANVNWIGISPSEAFPSGP--ATSYVA------------GKD---TL-LVGEDGQSHITTGNMALAILDQLEHP-T 204 (224)
T ss_dssp HHTTCTTSCEEEEEECSBCCCCC--CCCEEE------------ESS---BC-CCCTTSCCBCCHHHHHHHHHHHHHSC-C
T ss_pred HHHhcCCCcEEEEcCccccCCCc--ccCcee------------ccc---cc-ccCCCCCceEeHHHHHHHHHHHhcCc-c
Confidence 322 5689999999999999833 122111 000 11 11334568999999999999999843 2
Q ss_pred CCCCCCcEEEecCCCCCcccH
Q 037479 328 QPSDVNNIYQVGSSLRNPLIY 348 (492)
Q Consensus 328 ~~~~~~~iy~i~~~~~~~~t~ 348 (492)
.. +++|++++. ++..+
T Consensus 205 ~~---g~~~~~~~~--~~~~~ 220 (224)
T 3h2s_A 205 AI---RDRIVVRDA--DLEHH 220 (224)
T ss_dssp CT---TSEEEEEEC--C----
T ss_pred cc---CCEEEEecC--cchhc
Confidence 22 789999987 44443
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-25 Score=218.63 Aligned_cols=233 Identities=13% Similarity=0.061 Sum_probs=169.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+|+|||||||||||++|+++|++.|++ |++++|+..... .+.+. . ..+++++
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~-~~~l~-------------~----------~~~v~~v 56 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHH---VRAQVHSLKGLI-AEELQ-------------A----------IPNVTLF 56 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCSCSHH-HHHHH-------------T----------STTEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEECCCChhh-HHHHh-------------h----------cCCcEEE
Confidence 4689999999999999999999999864 588999765421 11111 0 1468899
Q ss_pred ecC-CCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhccc-ceeEEEeeeceeecc
Q 037479 91 PGD-ITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAK-LIVLVHVSTAFVWGE 168 (492)
Q Consensus 91 ~gD-l~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~~V~vST~~v~~~ 168 (492)
.+| ++ +.+.+..+++++|+|||+++.... ..|+.+ ++++++|++. + +++|||+||.++..
T Consensus 57 ~~D~l~-------d~~~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~- 118 (352)
T 1xgk_A 57 QGPLLN-------NVPLMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSL- 118 (352)
T ss_dssp ESCCTT-------CHHHHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGG-
T ss_pred ECCccC-------CHHHHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCccccc-
Confidence 999 98 556666888999999999975421 246777 9999999987 6 89999999975210
Q ss_pred cccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 169 ESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 169 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
+.+ ..++.|..||+.+|+++
T Consensus 119 ---------~~~---------------------------------------------------~~~~~y~~sK~~~E~~~ 138 (352)
T 1xgk_A 119 ---------YGP---------------------------------------------------WPAVPMWAPKFTVENYV 138 (352)
T ss_dssp ---------TSS---------------------------------------------------CCCCTTTHHHHHHHHHH
T ss_pred ---------cCC---------------------------------------------------CCCccHHHHHHHHHHHH
Confidence 100 23578999999999999
Q ss_pred HHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceee-EEecCCCcccceeeh-hhhhhHHHHHHHhhh
Q 037479 249 EHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLT-CFLGDVKGIVDVIPA-DMVVNAIVVAVVAHA 326 (492)
Q Consensus 249 ~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~d~v~v-ddva~~ii~~~~~~~ 326 (492)
++ .+++++++||+ +||+...... ..+.. ......|... .++++++...++|++ +|+|++++.++.+..
T Consensus 139 ~~--~gi~~~ivrpg-~~g~~~~~~~---~~~~~----~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~ 208 (352)
T 1xgk_A 139 RQ--LGLPSTFVYAG-IYNNNFTSLP---YPLFQ----MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGP 208 (352)
T ss_dssp HT--SSSCEEEEEEC-EEGGGCBSSS---CSSCB----EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCH
T ss_pred HH--cCCCEEEEecc-eecCCchhcc---ccccc----ccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCc
Confidence 87 48999999987 5776542110 00000 0001233332 346778888999999 999999999997532
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.... +++||+++ .++|+.|+++.+.+.+|+.+
T Consensus 209 ~~~~--g~~~~l~~---~~~s~~e~~~~i~~~~G~~~ 240 (352)
T 1xgk_A 209 QKWN--GHRIALTF---ETLSPVQVCAAFSRALNRRV 240 (352)
T ss_dssp HHHT--TCEEEECS---EEECHHHHHHHHHHHHTSCE
T ss_pred hhhC--CeEEEEec---CCCCHHHHHHHHHHHHCCCC
Confidence 1111 78999995 46999999999999999764
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=211.28 Aligned_cols=231 Identities=16% Similarity=0.161 Sum_probs=167.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhh--CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRV--QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~--g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
++|+|||||||||||++++++|++. |+ +|+++.|+.. ++. ++ ..++.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~---~V~~~~r~~~------~~~-~~---------------------~~~~~ 51 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF---VAKGLVRSAQ------GKE-KI---------------------GGEAD 51 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTC---EEEEEESCHH------HHH-HT---------------------TCCTT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCc---EEEEEEcCCC------chh-hc---------------------CCCee
Confidence 5789999999999999999999998 54 6689998632 111 00 24677
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc----------------hhHHHHHHHhHHHHHHHHHHHHhcc
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD----------------ERYDVALDLNTFGAKHVLNFSKKCA 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~----------------~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (492)
++.+|++ +.+.+..+++++|+|||+||..... +.....+++|+.++.+++++|++.
T Consensus 52 ~~~~D~~-------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~- 123 (253)
T 1xq6_A 52 VFIGDIT-------DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA- 123 (253)
T ss_dssp EEECCTT-------SHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-
T ss_pred EEEecCC-------CHHHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-
Confidence 8999999 5566668889999999999965321 112346799999999999999987
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
++++||++||..++.... +.. + .
T Consensus 124 ~~~~iv~~SS~~~~~~~~------~~~--------------------------------------------------~-~ 146 (253)
T 1xq6_A 124 GVKHIVVVGSMGGTNPDH------PLN--------------------------------------------------K-L 146 (253)
T ss_dssp TCSEEEEEEETTTTCTTC------GGG--------------------------------------------------G-G
T ss_pred CCCEEEEEcCccCCCCCC------ccc--------------------------------------------------c-c
Confidence 788999999987542110 000 0 0
Q ss_pred CCchHHHHHHHHHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehh
Q 037479 233 WPNTYVFTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPAD 312 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vd 312 (492)
..+.|..+|+.+|+++++ .+++++++||+.|+|+..... ..+.. ....+++ ...++++++
T Consensus 147 ~~~~y~~sK~~~e~~~~~--~~i~~~~vrpg~v~~~~~~~~-~~~~~--------------~~~~~~~---~~~~~~~~~ 206 (253)
T 1xq6_A 147 GNGNILVWKRKAEQYLAD--SGTPYTIIRAGGLLDKEGGVR-ELLVG--------------KDDELLQ---TDTKTVPRA 206 (253)
T ss_dssp GGCCHHHHHHHHHHHHHT--SSSCEEEEEECEEECSCSSSS-CEEEE--------------STTGGGG---SSCCEEEHH
T ss_pred cchhHHHHHHHHHHHHHh--CCCceEEEecceeecCCcchh-hhhcc--------------CCcCCcC---CCCcEEcHH
Confidence 114588899999999986 789999999999999865321 11100 0000111 124699999
Q ss_pred hhhhHHHHHHHhhhcCCCCCCcEEEecCCCC-CcccHHHHHHHHHHHhhc
Q 037479 313 MVVNAIVVAVVAHAKQPSDVNNIYQVGSSLR-NPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 313 dva~~ii~~~~~~~~~~~~~~~iy~i~~~~~-~~~t~~e~~~~~~~~~~~ 361 (492)
|+|++++.++.... .. +++||++++.. .++|+.|+++.+.+.+|+
T Consensus 207 Dva~~~~~~~~~~~-~~---g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 207 DVAEVCIQALLFEE-AK---NKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp HHHHHHHHHTTCGG-GT---TEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred HHHHHHHHHHcCcc-cc---CCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 99999999987432 22 78999998631 469999999999988775
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=211.89 Aligned_cols=207 Identities=17% Similarity=0.081 Sum_probs=157.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+|+|+|||||||||++++++|++.|+ +.+|++++|+.... ..+++++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~r~~~~~-------------------------------~~~~~~~ 51 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALAE-------------------------------HPRLDNP 51 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCCC-------------------------------CTTEECC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEeCCCccc-------------------------------CCCceEE
Confidence 468999999999999999999999985 12668899876531 1567889
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
.+|++ +.+.+..++ +|+|||+||..... +..+..+++|+.++.+++++|++. ++++||++||..+++.
T Consensus 52 ~~D~~-------~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~- 120 (215)
T 2a35_A 52 VGPLA-------ELLPQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK- 120 (215)
T ss_dssp BSCHH-------HHGGGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred ecccc-------CHHHHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC-
Confidence 99998 444444555 99999999976532 456788999999999999999987 7889999999877642
Q ss_pred ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 170 SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 170 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
+.+.|+.+|+.+|++++
T Consensus 121 ---------------------------------------------------------------~~~~y~~sK~~~e~~~~ 137 (215)
T 2a35_A 121 ---------------------------------------------------------------SSIFYNRVKGELEQALQ 137 (215)
T ss_dssp ---------------------------------------------------------------CSSHHHHHHHHHHHHHT
T ss_pred ---------------------------------------------------------------CccHHHHHHHHHHHHHH
Confidence 24689999999999998
Q ss_pred HhcCCCc-EEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcC
Q 037479 250 HLKENMS-VAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 250 ~~~~~~~-~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~ 328 (492)
+ .+++ ++++||+.++|+...+ .+...+. . ....+ .+ ...++++++|+|++++.++.+. .
T Consensus 138 ~--~~~~~~~~vrp~~v~g~~~~~--~~~~~~~----------~-~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~-~- 197 (215)
T 2a35_A 138 E--QGWPQLTIARPSLLFGPREEF--RLAEILA----------A-PIARI-LP--GKYHGIEACDLARALWRLALEE-G- 197 (215)
T ss_dssp T--SCCSEEEEEECCSEESTTSCE--EGGGGTT----------C-CCC-------CHHHHHHHHHHHHHHHHHHTCC-C-
T ss_pred H--cCCCeEEEEeCceeeCCCCcc--hHHHHHH----------H-hhhhc-cC--CCcCcEeHHHHHHHHHHHHhcC-C-
Confidence 7 5899 9999999999987642 2222111 1 11111 12 2678999999999999998742 1
Q ss_pred CCCCCcEEEecCCCCCcccHH
Q 037479 329 PSDVNNIYQVGSSLRNPLIYT 349 (492)
Q Consensus 329 ~~~~~~iy~i~~~~~~~~t~~ 349 (492)
+++||++++ +++++.
T Consensus 198 ----~~~~~i~~~--~~~~~~ 212 (215)
T 2a35_A 198 ----KGVRFVESD--ELRKLG 212 (215)
T ss_dssp ----SEEEEEEHH--HHHHHH
T ss_pred ----CCceEEcHH--HHHHhh
Confidence 679999987 555543
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-25 Score=207.32 Aligned_cols=216 Identities=15% Similarity=0.103 Sum_probs=138.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++++++|+++|+ +|++++|+... +. . ...++.++.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~------~~---------------------~-~~~~~~~~~~ 49 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH---EVTAIVRNAGK------IT---------------------Q-THKDINILQK 49 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCSHH------HH---------------------H-HCSSSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC---EEEEEEcCchh------hh---------------------h-ccCCCeEEec
Confidence 5899999999999999999999995 56899997432 11 0 0157899999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccc-
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESG- 171 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~- 171 (492)
|++++ +. ..++++|+|||+||.... ..+.|+.++++++++|++. +.+++|++||..++....+
T Consensus 50 D~~d~-------~~--~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~ 113 (221)
T 3ew7_A 50 DIFDL-------TL--SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDG 113 (221)
T ss_dssp CGGGC-------CH--HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC--------
T ss_pred cccCh-------hh--hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCC
Confidence 99953 33 556899999999997432 1466999999999999987 6889999999876543221
Q ss_pred -ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 172 -MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 172 -~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
...|.. +..+.+.|+.+|..+|.+..-
T Consensus 114 ~~~~~~~----------------------------------------------------~~~~~~~y~~~k~~~e~~~~~ 141 (221)
T 3ew7_A 114 NTLLESK----------------------------------------------------GLREAPYYPTARAQAKQLEHL 141 (221)
T ss_dssp ---------------------------------------------------------------CCCSCCHHHHHHHHHHH
T ss_pred ccccccC----------------------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 000100 013456799999999997322
Q ss_pred h--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcC
Q 037479 251 L--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 251 ~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~ 328 (492)
. ..+++++++||+.|+|+.. ..+. +. .. +....+.+++ .++|+++|||++++.++.+. ..
T Consensus 142 ~~~~~gi~~~ivrp~~v~g~~~--~~~~---------~~--~~-~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~-~~ 203 (221)
T 3ew7_A 142 KSHQAEFSWTYISPSAMFEPGE--RTGD---------YQ--IG-KDHLLFGSDG---NSFISMEDYAIAVLDEIERP-NH 203 (221)
T ss_dssp HTTTTTSCEEEEECSSCCCCC--------------------------------------CCCHHHHHHHHHHHHHSC-SC
T ss_pred HhhccCccEEEEeCcceecCCC--ccCc---------eE--ec-cccceecCCC---CceEeHHHHHHHHHHHHhCc-cc
Confidence 2 4789999999999999832 1110 00 00 1111222222 26899999999999999853 22
Q ss_pred CCCCCcEEEecCCCCCcccHHH
Q 037479 329 PSDVNNIYQVGSSLRNPLIYTN 350 (492)
Q Consensus 329 ~~~~~~iy~i~~~~~~~~t~~e 350 (492)
. +++||++++ .+.+..|
T Consensus 204 ~---g~~~~~~~~--~~~~~~~ 220 (221)
T 3ew7_A 204 L---NEHFTVAGK--LEHHHHH 220 (221)
T ss_dssp T---TSEEECCC----------
T ss_pred c---CCEEEECCC--Ccccccc
Confidence 2 789999998 5555443
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=203.29 Aligned_cols=211 Identities=15% Similarity=0.083 Sum_probs=155.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|||||||||||++++++|++.|+. .+|+++.|+....... ...++.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~-~~V~~~~r~~~~~~~~---------------------------~~~~~~~ 67 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKLTFDEE---------------------------AYKNVNQ 67 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCCCCCSG---------------------------GGGGCEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCC-CEEEEEEcCCCCcccc---------------------------ccCCceE
Confidence 67899999999999999999999999961 2568999976543210 0146788
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
+.+|++ +.+....+++++|+|||+||.......++..+++|+.|+.+++++|++. ++++||++||..+++.
T Consensus 68 ~~~D~~-------d~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~- 138 (242)
T 2bka_A 68 EVVDFE-------KLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKS- 138 (242)
T ss_dssp EECCGG-------GGGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred EecCcC-------CHHHHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCC-
Confidence 999999 5555667888999999999976555556788999999999999999987 6789999999877642
Q ss_pred ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 170 SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 170 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
+.+.|+.||+.+|++++
T Consensus 139 ---------------------------------------------------------------~~~~Y~~sK~~~e~~~~ 155 (242)
T 2bka_A 139 ---------------------------------------------------------------SNFLYLQVKGEVEAKVE 155 (242)
T ss_dssp ---------------------------------------------------------------CSSHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------CcchHHHHHHHHHHHHH
Confidence 23579999999999998
Q ss_pred HhcCCC-cEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcC
Q 037479 250 HLKENM-SVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 250 ~~~~~~-~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~ 328 (492)
. .++ +++++||+.|+|+...+. ....+....... .+.. .....+++++|+|++++.++.+...
T Consensus 156 ~--~~~~~~~~vrpg~v~~~~~~~~--------~~~~~~~~~~~~----~~~~-~~~~~~~~~~dva~~~~~~~~~~~~- 219 (242)
T 2bka_A 156 E--LKFDRYSVFRPGVLLCDRQESR--------PGEWLVRKFFGS----LPDS-WASGHSVPVVTVVRAMLNNVVRPRD- 219 (242)
T ss_dssp T--TCCSEEEEEECCEEECTTGGGS--------HHHHHHHHHHCS----CCTT-GGGGTEEEHHHHHHHHHHHHTSCCC-
T ss_pred h--cCCCCeEEEcCceecCCCCCCc--------HHHHHHHHhhcc----cCcc-ccCCcccCHHHHHHHHHHHHhCccc-
Confidence 7 467 599999999999865321 111111111111 1110 1123589999999999999874221
Q ss_pred CCCCCcEEEecC
Q 037479 329 PSDVNNIYQVGS 340 (492)
Q Consensus 329 ~~~~~~iy~i~~ 340 (492)
.+.|++++
T Consensus 220 ----~~~~~~~~ 227 (242)
T 2bka_A 220 ----KQMELLEN 227 (242)
T ss_dssp ----SSEEEEEH
T ss_pred ----cCeeEeeH
Confidence 45666544
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=197.77 Aligned_cols=203 Identities=15% Similarity=0.103 Sum_probs=150.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|+|||||||||++++++|++.|+ +|+++.|+...... ....+++++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~---------------------------~~~~~~~~~ 51 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDSSRLPS---------------------------EGPRPAHVV 51 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCGGGSCS---------------------------SSCCCSEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeChhhccc---------------------------ccCCceEEE
Confidence 458999999999999999999999985 56899997543210 002578899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.+|++ +.+.+..+++++|+|||+|+.....+. .++|+.++.+++++|++. ++++||++||..+++...
T Consensus 52 ~~D~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~----~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~ 119 (206)
T 1hdo_A 52 VGDVL-------QAADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPT 119 (206)
T ss_dssp ESCTT-------SHHHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTT
T ss_pred EecCC-------CHHHHHHHHcCCCEEEECccCCCCCCc----cchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCcc
Confidence 99999 556666888999999999997654221 258999999999999987 788999999998876532
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
+. + .+.+.|+.+|..+|+++++
T Consensus 120 ~~------~----------------------------------------------------~~~~~y~~~K~~~e~~~~~ 141 (206)
T 1hdo_A 120 KV------P----------------------------------------------------PRLQAVTDDHIRMHKVLRE 141 (206)
T ss_dssp CS------C----------------------------------------------------GGGHHHHHHHHHHHHHHHH
T ss_pred cc------c----------------------------------------------------ccchhHHHHHHHHHHHHHh
Confidence 10 0 0246899999999999976
Q ss_pred hcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCC
Q 037479 251 LKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPS 330 (492)
Q Consensus 251 ~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~ 330 (492)
.+++++++||+.++.... .+.... .+.+.+. .++++++|+|++++.++.+. ...
T Consensus 142 --~~i~~~~lrp~~~~~~~~---~~~~~~-----------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~-~~~- 195 (206)
T 1hdo_A 142 --SGLKYVAVMPPHIGDQPL---TGAYTV-----------------TLDGRGP--SRVISKHDLGHFMLRCLTTD-EYD- 195 (206)
T ss_dssp --TCSEEEEECCSEEECCCC---CSCCEE-----------------ESSSCSS--CSEEEHHHHHHHHHHTTSCS-TTT-
T ss_pred --CCCCEEEEeCCcccCCCC---CcceEe-----------------cccCCCC--CCccCHHHHHHHHHHHhcCc-ccc-
Confidence 689999999999842211 111000 0001111 48999999999999988742 222
Q ss_pred CCCcEEEecCC
Q 037479 331 DVNNIYQVGSS 341 (492)
Q Consensus 331 ~~~~iy~i~~~ 341 (492)
+++|+++++
T Consensus 196 --g~~~~i~~g 204 (206)
T 1hdo_A 196 --GHSTYPSHQ 204 (206)
T ss_dssp --TCEEEEECC
T ss_pred --ccceeeecc
Confidence 789999986
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.4e-24 Score=208.11 Aligned_cols=241 Identities=14% Similarity=0.168 Sum_probs=167.7
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|+|||||||+|+++++.|++.|++ |++++|+....... +.. .+ . .....+++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~-~~~-~~---------~--------~~~~~~~~~~~ 61 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNID-KVQ-ML---------L--------YFKQLGAKLIE 61 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCSCCSSCHH-HHH-HH---------H--------HHHTTTCEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCc---EEEEECCCcccchh-HHH-HH---------H--------HHHhCCeEEEe
Confidence 578999999999999999999999964 58999986543221 111 00 0 00125789999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESG 171 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~ 171 (492)
+|++ +.+.+..+++++|+|||+|+..... .|+.++.+++++|++.+++++||+ | ++|....
T Consensus 62 ~D~~-------d~~~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~ 122 (313)
T 1qyd_A 62 ASLD-------DHQRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPD 122 (313)
T ss_dssp CCSS-------CHHHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTT
T ss_pred CCCC-------CHHHHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcc
Confidence 9999 5566678889999999999976432 378899999999999833999986 4 3342211
Q ss_pred ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh
Q 037479 172 MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL 251 (492)
Q Consensus 172 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 251 (492)
.+ +... ....+.| .+|..+|+++++
T Consensus 123 ~~-~~~~----------------------------------------------------~p~~~~y-~sK~~~e~~~~~- 147 (313)
T 1qyd_A 123 IM-EHAL----------------------------------------------------QPGSITF-IDKRKVRRAIEA- 147 (313)
T ss_dssp SC-CCCC----------------------------------------------------SSTTHHH-HHHHHHHHHHHH-
T ss_pred cc-ccCC----------------------------------------------------CCCcchH-HHHHHHHHHHHh-
Confidence 00 0000 0113568 999999999987
Q ss_pred cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCC
Q 037479 252 KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSD 331 (492)
Q Consensus 252 ~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~ 331 (492)
.+++++++||+.++|.....+.... . .....+....++++++...++++++|+|++++.++.+.. ..
T Consensus 148 -~g~~~~ilrp~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~-- 214 (313)
T 1qyd_A 148 -ASIPYTYVSSNMFAGYFAGSLAQLD-------G--HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-TL-- 214 (313)
T ss_dssp -TTCCBCEEECCEEHHHHTTTSSCTT-------C--CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-GS--
T ss_pred -cCCCeEEEEeceecccccccccccc-------c--cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcc-cC--
Confidence 6899999999999885432111100 0 000112222456778889999999999999999887432 22
Q ss_pred CCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 332 VNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 332 ~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++|+++++. +++|+.|+++.+.+.+|+..
T Consensus 215 -~~~~~~~g~~-~~~s~~e~~~~~~~~~g~~~ 244 (313)
T 1qyd_A 215 -NKTMYIRPPM-NILSQKEVIQIWERLSEQNL 244 (313)
T ss_dssp -SSEEECCCGG-GEEEHHHHHHHHHHHHTCCC
T ss_pred -CceEEEeCCC-CccCHHHHHHHHHHhcCCCC
Confidence 5677776531 68999999999999999753
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=204.04 Aligned_cols=235 Identities=17% Similarity=0.122 Sum_probs=162.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC-CCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA-DAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~-~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+|+|+|||||||+|++++++|++.|++ |++++|+. ....+.++.. .+ ..+ ...+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~-~~------~~l-----------~~~~v~~v 60 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNP---TYALVRKTITAANPETKEE-LI------DNY-----------QSLGVILL 60 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCC---EEEEECCSCCSSCHHHHHH-HH------HHH-----------HHTTCEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCc---EEEEECCCcccCChHHHHH-HH------HHH-----------HhCCCEEE
Confidence 578999999999999999999999964 58999986 2222101111 00 000 12568899
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.+|++ +.+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +|...
T Consensus 61 ~~D~~-------d~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~ 117 (307)
T 2gas_A 61 EGDIN-------DHETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLDV 117 (307)
T ss_dssp ECCTT-------CHHHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSCT
T ss_pred EeCCC-------CHHHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee-cc---cccCc
Confidence 99999 55666788899999999999643 5577899999998833899984 32 33211
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC-CchHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW-PNTYVFTKVMGEMFIE 249 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~Y~~sK~~aE~~v~ 249 (492)
+|.. + ..+ .+.| .+|+.+|+.++
T Consensus 118 ---~~~~-~---------------------------------------------------~~p~~~~y-~sK~~~e~~~~ 141 (307)
T 2gas_A 118 ---DRHD-A---------------------------------------------------VEPVRQVF-EEKASIRRVIE 141 (307)
T ss_dssp ---TSCC-C---------------------------------------------------CTTHHHHH-HHHHHHHHHHH
T ss_pred ---cccc-C---------------------------------------------------CCcchhHH-HHHHHHHHHHH
Confidence 1100 0 011 2578 99999999998
Q ss_pred HhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCC
Q 037479 250 HLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQP 329 (492)
Q Consensus 250 ~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~ 329 (492)
+ .+++++++||+.+++..... +.... .....+....++++++...++++++|+|++++.++.+.. ..
T Consensus 142 ~--~~i~~~~lrp~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~ 208 (307)
T 2gas_A 142 A--EGVPYTYLCCHAFTGYFLRN---LAQLD-------ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN-TL 208 (307)
T ss_dssp H--HTCCBEEEECCEETTTTGGG---TTCTT-------CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG-GT
T ss_pred H--cCCCeEEEEcceeecccccc---ccccc-------cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc-cc
Confidence 7 57999999999988754311 11100 001112223456788888999999999999999987432 22
Q ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 330 SDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 330 ~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++|++.++. +++|+.|+++.+.+.+|+..
T Consensus 209 ---~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~ 238 (307)
T 2gas_A 209 ---NKAVHIRLPK-NYLTQNEVIALWEKKIGKTL 238 (307)
T ss_dssp ---TEEEECCCGG-GEEEHHHHHHHHHHHHTSCC
T ss_pred ---CceEEEeCCC-CcCCHHHHHHHHHHHhCCCC
Confidence 5677776431 68999999999999999753
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=204.54 Aligned_cols=235 Identities=17% Similarity=0.198 Sum_probs=163.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|+|||||||+|+++++.|++.|++ |++++|+.......++.. .+ . .....+++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~~~-~~---------~--------~l~~~~v~~v~ 62 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQ-LL---------E--------SFKASGANIVH 62 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCCCCTTTTHHHHH-HH---------H--------HHHTTTCEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCC---EEEEECCcccccCHHHHH-HH---------H--------HHHhCCCEEEE
Confidence 578999999999999999999999964 589999765431011111 00 0 00125789999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESG 171 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~ 171 (492)
+|++ +.+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +|...
T Consensus 63 ~D~~-------d~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~- 118 (308)
T 1qyc_A 63 GSID-------DHASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP-SE---FGNDV- 118 (308)
T ss_dssp CCTT-------CHHHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT-
T ss_pred eccC-------CHHHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee-cc---cccCc-
Confidence 9999 55666688899999999998642 5577899999999833899984 43 33211
Q ss_pred ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC-CchHHHHHHHHHHHHHH
Q 037479 172 MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW-PNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 172 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~Y~~sK~~aE~~v~~ 250 (492)
+|.. + ..+ .+.| .+|..+|+.+++
T Consensus 119 --~~~~-----------~-----------------------------------------~~p~~~~y-~sK~~~e~~~~~ 143 (308)
T 1qyc_A 119 --DNVH-----------A-----------------------------------------VEPAKSVF-EVKAKVRRAIEA 143 (308)
T ss_dssp --TSCC-----------C-----------------------------------------CTTHHHHH-HHHHHHHHHHHH
T ss_pred --cccc-----------c-----------------------------------------CCcchhHH-HHHHHHHHHHHh
Confidence 1100 0 011 2468 999999999987
Q ss_pred hcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCC
Q 037479 251 LKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPS 330 (492)
Q Consensus 251 ~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~ 330 (492)
.+++++++||+.++|.....+..+. .....+....++++++...++++++|+|++++.++.+.. ..
T Consensus 144 --~~~~~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~- 209 (308)
T 1qyc_A 144 --EGIPYTYVSSNCFAGYFLRSLAQAG----------LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR-TL- 209 (308)
T ss_dssp --HTCCBEEEECCEEHHHHTTTTTCTT----------CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG-GT-
T ss_pred --cCCCeEEEEeceecccccccccccc----------ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc-cc-
Confidence 5799999999999886432111100 001122233567888889999999999999998886432 12
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 331 DVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 331 ~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++|+++++. +++|+.|+++.+.+.+|+..
T Consensus 210 --~~~~~~~g~~-~~~s~~e~~~~~~~~~g~~~ 239 (308)
T 1qyc_A 210 --NKTLYLRLPA-NTLSLNELVALWEKKIDKTL 239 (308)
T ss_dssp --TEEEECCCGG-GEEEHHHHHHHHHHHTTSCC
T ss_pred --CeEEEEeCCC-CccCHHHHHHHHHHHhCCCC
Confidence 5778876431 68999999999999999753
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-23 Score=201.79 Aligned_cols=230 Identities=13% Similarity=0.118 Sum_probs=163.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC-CCcCH--HHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA-DAKSA--TVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~-~~~~~--~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
++|+|+|||||||+|+++++.|++.|+ +|++++|+. ..... .+.+. .+ ...++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~l~----------~~-----------~~~~v 58 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSH---PTFIYARPLTPDSTPSSVQLRE----------EF-----------RSMGV 58 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTC---CEEEEECCCCTTCCHHHHHHHH----------HH-----------HHTTC
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCC---cEEEEECCcccccChHHHHHHH----------Hh-----------hcCCc
Confidence 357899999999999999999999986 458999986 32221 11111 00 12578
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
+++.+|++ +.+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ | ++|
T Consensus 59 ~~v~~D~~-------d~~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g 115 (321)
T 3c1o_A 59 TIIEGEME-------EHEKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAAGNIKRFLP-S---DFG 115 (321)
T ss_dssp EEEECCTT-------CHHHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCCEEEC-S---CCS
T ss_pred EEEEecCC-------CHHHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHhCCccEEec-c---ccc
Confidence 99999999 66667788899999999998642 5678899999999832899983 3 233
Q ss_pred ccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 168 EESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 168 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
... +|.. + .. ...+.| .+|..+|++
T Consensus 116 ~~~---~~~~-~----------~~----------------------------------------p~~~~y-~sK~~~e~~ 140 (321)
T 3c1o_A 116 CEE---DRIK-P----------LP----------------------------------------PFESVL-EKKRIIRRA 140 (321)
T ss_dssp SCG---GGCC-C----------CH----------------------------------------HHHHHH-HHHHHHHHH
T ss_pred cCc---cccc-c----------CC----------------------------------------CcchHH-HHHHHHHHH
Confidence 211 1110 0 00 012478 999999999
Q ss_pred HHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHH---hccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 248 IEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAV---GYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 248 v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
+++ .+++++++||+.+++.... .+.. ....+.....+++++...++++++|+|++++.++.+
T Consensus 141 ~~~--~~~~~~~lrp~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~ 205 (321)
T 3c1o_A 141 IEA--AALPYTYVSANCFGAYFVN-------------YLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACD 205 (321)
T ss_dssp HHH--HTCCBEEEECCEEHHHHHH-------------HHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHC
T ss_pred HHH--cCCCeEEEEeceecccccc-------------ccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhC
Confidence 986 5799999999998875321 1111 011222334667888899999999999999999874
Q ss_pred hhcCCCCCCcEEEecC-CCCCcccHHHHHHHHHHHhhcCC
Q 037479 325 HAKQPSDVNNIYQVGS-SLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 325 ~~~~~~~~~~iy~i~~-~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.. .. +++|++++ + .++|+.|+++.+.+.+|+..
T Consensus 206 ~~-~~---g~~~~~~g~~--~~~t~~e~~~~~~~~~g~~~ 239 (321)
T 3c1o_A 206 PR-CC---NRIVIYRPPK--NIISQNELISLWEAKSGLSF 239 (321)
T ss_dssp GG-GT---TEEEECCCGG--GEEEHHHHHHHHHHHHTSCC
T ss_pred cc-cc---CeEEEEeCCC--CcccHHHHHHHHHHHcCCcc
Confidence 32 22 67788764 4 68999999999999999754
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9.7e-23 Score=200.29 Aligned_cols=226 Identities=19% Similarity=0.193 Sum_probs=161.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|+|||||||+|++++++|++.|++ |++++|+.... .+.+. + + ...+++++.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~--~~~~~-~---------l-----------~~~~v~~v~~ 65 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHP---TYVFTRPNSSK--TTLLD-E---------F-----------QSLGAIIVKG 65 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCC---EEEEECTTCSC--HHHHH-H---------H-----------HHTTCEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCc---EEEEECCCCch--hhHHH-H---------h-----------hcCCCEEEEe
Confidence 58999999999999999999999964 58999986521 11111 0 0 0257899999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGM 172 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~~ 172 (492)
|++ +.+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +|...
T Consensus 66 Dl~-------d~~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~-- 120 (318)
T 2r6j_A 66 ELD-------EHEKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVEE-- 120 (318)
T ss_dssp CTT-------CHHHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSCT--
T ss_pred cCC-------CHHHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccCc--
Confidence 999 56666788899999999998642 5678899999999833899985 43 33211
Q ss_pred eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHhc
Q 037479 173 LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHLK 252 (492)
Q Consensus 173 i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 252 (492)
+|.. +.. ...+.| .+|..+|+++++
T Consensus 121 -~~~~-----------~~~----------------------------------------p~~~~y-~sK~~~e~~~~~-- 145 (318)
T 2r6j_A 121 -DRIN-----------ALP----------------------------------------PFEALI-ERKRMIRRAIEE-- 145 (318)
T ss_dssp -TTCC-----------CCH----------------------------------------HHHHHH-HHHHHHHHHHHH--
T ss_pred -cccc-----------CCC----------------------------------------CcchhH-HHHHHHHHHHHh--
Confidence 1100 000 002468 999999999987
Q ss_pred CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCC
Q 037479 253 ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDV 332 (492)
Q Consensus 253 ~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~ 332 (492)
.+++++++||+.+++... ..++.....+....++++++...++++++|+|++++.++.+.. ..
T Consensus 146 ~~~~~~~lr~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~--- 208 (318)
T 2r6j_A 146 ANIPYTYVSANCFASYFI-------------NYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR-AL--- 208 (318)
T ss_dssp TTCCBEEEECCEEHHHHH-------------HHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG-GT---
T ss_pred cCCCeEEEEcceehhhhh-------------hhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc-cc---
Confidence 689999999998776321 1122111222333567888889999999999999999887432 22
Q ss_pred CcEEEecC-CCCCcccHHHHHHHHHHHhhcCC
Q 037479 333 NNIYQVGS-SLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 333 ~~iy~i~~-~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+++|++++ + +++|+.|+++.+.+.+|+..
T Consensus 209 ~~~~~~~g~~--~~~s~~e~~~~~~~~~g~~~ 238 (318)
T 2r6j_A 209 NRVVIYRPST--NIITQLELISRWEKKIGKKF 238 (318)
T ss_dssp TEEEECCCGG--GEEEHHHHHHHHHHHHTCCC
T ss_pred CeEEEecCCC--CccCHHHHHHHHHHHhCCCC
Confidence 56777764 4 68999999999999999753
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-22 Score=191.56 Aligned_cols=239 Identities=17% Similarity=0.186 Sum_probs=167.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ++.+. ..++.+
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~~~------~~~~~~ 68 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGA---KVVIADIADDH---GQKVC-------------NNIGS------PDVISF 68 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHHCC------TTTEEE
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCChhH---HHHHH-------------HHhCC------CCceEE
Confidence 5789999999999999999999999996 55788775321 11111 11110 136899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhc--
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF---------DERYDVALDLNTFGAKHVLNFSKKC-- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 69 ~~~D~~-------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 141 (278)
T 2bgk_A 69 VHCDVT-------KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMI 141 (278)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHG
T ss_pred EECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 999999 4444445554 79999999997532 1456788999999999999988764
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..+||++||..++....
T Consensus 142 ~~~~~~iv~isS~~~~~~~~------------------------------------------------------------ 161 (278)
T 2bgk_A 142 PAKKGSIVFTASISSFTAGE------------------------------------------------------------ 161 (278)
T ss_dssp GGTCEEEEEECCGGGTCCCT------------------------------------------------------------
T ss_pred hcCCCeEEEEeeccccCCCC------------------------------------------------------------
Confidence 1457999999977654321
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..|.+++.+ ..+++++++||+.|+++......+ ........+..+ .+...
T Consensus 162 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~~-------~~~~~ 227 (278)
T 2bgk_A 162 -GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG------VDSSRVEELAHQ-------AANLK 227 (278)
T ss_dssp -TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS------CCHHHHHHHHHH-------TCSSC
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcc------cchhHHHHhhhc-------ccccc
Confidence 13468999999999988765 358999999999999986532211 011111111110 11122
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHH
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRY 358 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~ 358 (492)
..+++++|+|++++.++....... . +++|++.++ ..+++.|+.+.+.+.
T Consensus 228 ~~~~~~~dva~~~~~l~~~~~~~~-~-G~~~~v~gg--~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 228 GTLLRAEDVADAVAYLAGDESKYV-S-GLNLVIDGG--YTRTNPAFPTALKHG 276 (278)
T ss_dssp SCCCCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT--GGGCCTHHHHHSCSC
T ss_pred cccCCHHHHHHHHHHHcCcccccC-C-CCEEEECCc--ccccCCccchhhhhh
Confidence 358999999999999886433222 2 789999998 789999999877543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=193.13 Aligned_cols=236 Identities=11% Similarity=0.046 Sum_probs=155.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++++++|++.|+ +|+++.|+..... . .+.+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-------------------------------~---~~~~ 44 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGH---TVIGIDRGQADIE-------------------------------A---DLST 44 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSSEE-------------------------------C---CTTS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCChhHcc-------------------------------c---cccC
Confidence 5899999999999999999999996 5689998754310 1 1567
Q ss_pred CCCCCCCCCCchhhHHHhcc----CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc---ccceeEEEeeecee
Q 037479 93 DITREDLGVKDSNLREEMWN----KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKC---AKLIVLVHVSTAFV 165 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~----~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~V~vST~~v 165 (492)
|++ +.+..+.+++ ++|+|||+||......+++..+++|+.|+.++++++.+. .+.++||++||..+
T Consensus 45 D~~-------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 117 (255)
T 2dkn_A 45 PGG-------RETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117 (255)
T ss_dssp HHH-------HHHHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred Ccc-------cHHHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence 777 4444555554 899999999987645668889999999999999988764 24579999999888
Q ss_pred eccccc--ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 166 WGEESG--MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 166 ~~~~~~--~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
++.... ...|... ..+++....... ....+.+.|+.||+.
T Consensus 118 ~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~-------~~~~~~~~Y~~sK~a 159 (255)
T 2dkn_A 118 TQPGAAELPMVEAML-------------------------------AGDEARAIELAE-------QQGQTHLAYAGSKYA 159 (255)
T ss_dssp GSTTGGGCHHHHHHH-------------------------------HTCHHHHHHHHH-------HHCCHHHHHHHHHHH
T ss_pred ccccccccchhhhhc-------------------------------ccchhhhhhhcc-------ccCCcchhHHHHHHH
Confidence 764321 0001000 001110000000 001234689999999
Q ss_pred HHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHH
Q 037479 244 GEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAI 318 (492)
Q Consensus 244 aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~i 318 (492)
+|.+++.+ ..+++++++||+.|+|+..... .... ........ + . + ...++++++|+|+++
T Consensus 160 ~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~---~~~~-~~~~~~~~--------~-~-~-~~~~~~~~~dva~~~ 224 (255)
T 2dkn_A 160 VTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS---KADP-RYGESTRR--------F-V-A-PLGRGSEPREVAEAI 224 (255)
T ss_dssp HHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHH---HHCT-TTHHHHHS--------C-C-C-TTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhc---ccch-hhHHHHHH--------H-H-H-HhcCCCCHHHHHHHH
Confidence 99998876 2589999999999998753210 0000 00011100 0 0 1 334789999999999
Q ss_pred HHHHHhhhcCCCCCCcEEEecCCCCCcccHH
Q 037479 319 VVAVVAHAKQPSDVNNIYQVGSSLRNPLIYT 349 (492)
Q Consensus 319 i~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~ 349 (492)
+.++........ +++|+++++ .+++++
T Consensus 225 ~~l~~~~~~~~~--G~~~~v~gg--~~~~~~ 251 (255)
T 2dkn_A 225 AFLLGPQASFIH--GSVLFVDGG--MDALMR 251 (255)
T ss_dssp HHHHSGGGTTCC--SCEEEESTT--HHHHHC
T ss_pred HHHhCCCcccce--eeEEEecCC--eEeeee
Confidence 999875322222 789999998 555554
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.1e-22 Score=190.27 Aligned_cols=240 Identities=18% Similarity=0.097 Sum_probs=159.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+||||||+|+||++++++|++.|+ +|+++.|+.... +.+. ++ ...++.++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~---~~~~-------------~~--------~~~~~~~~ 56 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGD---TVIGTARRTEAL---DDLV-------------AA--------YPDRAEAI 56 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSGGGG---HHHH-------------HH--------CTTTEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHH-------------Hh--------ccCCceEE
Confidence 579999999999999999999999996 568888865321 1111 11 12578999
Q ss_pred ecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHH----HHHHHHHhcc
Q 037479 91 PGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAK----HVLNFSKKCA 152 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~----~ll~~a~~~~ 152 (492)
.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+. .++..+++.
T Consensus 57 ~~Dv~-------~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~- 128 (281)
T 3m1a_A 57 SLDVT-------DGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER- 128 (281)
T ss_dssp ECCTT-------CHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred EeeCC-------CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999 4444445544 78999999997532 2456788999999954 445555554
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 129 ~~~~iv~~sS~~~~~~~--------------------------------------------------------------~ 146 (281)
T 3m1a_A 129 GSGSVVNISSFGGQLSF--------------------------------------------------------------A 146 (281)
T ss_dssp TCEEEEEECCGGGTCCC--------------------------------------------------------------T
T ss_pred CCCEEEEEcCccccCCC--------------------------------------------------------------C
Confidence 56799999996544221 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccc-cCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWA-EGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
+.+.|+.||+..|.+.+.+ ..+++++++||+.|.++...+..... ............. .. ........
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~ 220 (281)
T 3m1a_A 147 GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPT---RQ---LVQGSDGS 220 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHH---HH---HHHC----
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHH---HH---HHhhccCC
Confidence 4578999999999998765 25899999999999887654322211 1111111111000 00 01112233
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
.+++++|+|++++.++.... . +..|+++++ ......+....+.+.++
T Consensus 221 ~~~~~~dva~a~~~~~~~~~--~---~~~~~l~s~--~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 221 QPGDPAKAAAAIRLALDTEK--T---PLRLALGGD--AVDFLTGHLDSVRAELT 267 (281)
T ss_dssp -CBCHHHHHHHHHHHHHSSS--C---CSEEEESHH--HHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCC--C---CeEEecCch--HHHHHHHHHHHHHHHHH
Confidence 57889999999999987432 2 678999987 55566666666655544
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=185.69 Aligned_cols=225 Identities=16% Similarity=0.128 Sum_probs=156.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. +.++.. ..++.+
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~---------~~~~~~ 64 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINADA---ANHVV---------DEIQQL---------GGQAFA 64 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESCHHH---HHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH---------HHHHHh---------CCceEE
Confidence 6789999999999999999999999996 56888886421 11111 111111 256888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 65 ~~~D~~-------~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 137 (255)
T 1fmc_A 65 CRCDIT-------SEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 999999 4444545554 89999999997543 2456788999999999999988532 15
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..+||++||..++... .+
T Consensus 138 ~~~iv~~sS~~~~~~~--------------------------------------------------------------~~ 155 (255)
T 1fmc_A 138 GGVILTITSMAAENKN--------------------------------------------------------------IN 155 (255)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------------TT
T ss_pred CcEEEEEcchhhcCCC--------------------------------------------------------------CC
Confidence 6799999997655321 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
.+.|+.||+..|.+++.+ ..+++++++||+.|+++..... ....+...+..+ .....+
T Consensus 156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~--------~~~~~~~~~~~~---------~~~~~~ 218 (255)
T 1fmc_A 156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--------ITPEIEQKMLQH---------TPIRRL 218 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--------CCHHHHHHHHHT---------CSSCSC
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc--------cChHHHHHHHhc---------CCcccC
Confidence 468999999999988765 3589999999999998653211 011122111111 112357
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccH
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIY 348 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~ 348 (492)
++++|+|++++.++........ +++|+++++ ..+|+
T Consensus 219 ~~~~dva~~~~~l~~~~~~~~~--G~~~~v~gg--~~~s~ 254 (255)
T 1fmc_A 219 GQPQDIANAALFLCSPAASWVS--GQILTVSGG--GVQEL 254 (255)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT--SCCCC
T ss_pred CCHHHHHHHHHHHhCCccccCC--CcEEEECCc--eeccC
Confidence 8999999999998864332221 789999998 55554
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-21 Score=180.90 Aligned_cols=204 Identities=16% Similarity=0.160 Sum_probs=137.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+..|+||||||||+||++++++|++.|. .+|++++|+...... ....++.+
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~--~~V~~~~R~~~~~~~---------------------------~~~~~~~~ 71 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQT--IKQTLFARQPAKIHK---------------------------PYPTNSQI 71 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTT--EEEEEEESSGGGSCS---------------------------SCCTTEEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCC--ceEEEEEcChhhhcc---------------------------cccCCcEE
Confidence 4467999999999999999999999982 256899997543211 11257899
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
+.+|++ +.+.++.+++++|+|||+|+.... ..+++++++++++. ++++||++||..+++..
T Consensus 72 ~~~Dl~-------d~~~~~~~~~~~D~vv~~a~~~~~-----------~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~ 132 (236)
T 3qvo_A 72 IMGDVL-------NHAALKQAMQGQDIVYANLTGEDL-----------DIQANSVIAAMKAC-DVKRLIFVLSLGIYDEV 132 (236)
T ss_dssp EECCTT-------CHHHHHHHHTTCSEEEEECCSTTH-----------HHHHHHHHHHHHHT-TCCEEEEECCCCC----
T ss_pred EEecCC-------CHHHHHHHhcCCCEEEEcCCCCch-----------hHHHHHHHHHHHHc-CCCEEEEEecceecCCC
Confidence 999999 666677888999999999985321 13567899999987 78899999999988754
Q ss_pred ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 170 SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 170 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
.+...+ +. + .....+...|..+|+.+.
T Consensus 133 ~~~~~~--~~--------------~-------------------------------------~~~~~~~~~~~~~~~~l~ 159 (236)
T 3qvo_A 133 PGKFVE--WN--------------N-------------------------------------AVIGEPLKPFRRAADAIE 159 (236)
T ss_dssp -----------------------------------------------------------------CGGGHHHHHHHHHHH
T ss_pred Cccccc--ch--------------h-------------------------------------hcccchHHHHHHHHHHHH
Confidence 321000 00 0 112234444556666665
Q ss_pred HhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCC
Q 037479 250 HLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQP 329 (492)
Q Consensus 250 ~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~ 329 (492)
+ .+++++++||+.|+++...... ...........+++++|||++++.++.+.....
T Consensus 160 ~--~gi~~~~vrPg~i~~~~~~~~~----------------------~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~ 215 (236)
T 3qvo_A 160 A--SGLEYTILRPAWLTDEDIIDYE----------------------LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHI 215 (236)
T ss_dssp T--SCSEEEEEEECEEECCSCCCCE----------------------EECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTT
T ss_pred H--CCCCEEEEeCCcccCCCCcceE----------------------EeccCCCCCCcEECHHHHHHHHHHHHcCccccc
Confidence 4 6899999999999986442110 011111112358999999999999998543222
Q ss_pred CCCCcEEEecCC
Q 037479 330 SDVNNIYQVGSS 341 (492)
Q Consensus 330 ~~~~~iy~i~~~ 341 (492)
+++|+++++
T Consensus 216 ---g~~~~i~~~ 224 (236)
T 3qvo_A 216 ---GENIGINQP 224 (236)
T ss_dssp ---TEEEEEECS
T ss_pred ---CeeEEecCC
Confidence 789999987
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-21 Score=178.12 Aligned_cols=202 Identities=17% Similarity=0.154 Sum_probs=142.3
Q ss_pred CEEEEeCCcchhhHHHHHHHH-hhCCCCCeEEEEEecCC-CcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 13 KTILVTGATGFLAKIFVEKIL-RVQPNVKKLYLLLRAAD-AKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll-~~g~~V~~i~~lvR~~~-~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
|+|+||||||+||++++++|+ +.|+ +|+++.|+.. .... +. . ...++.++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~---~V~~~~r~~~~~~~~---~~-------------~---------~~~~~~~~ 57 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM---HITLYGRQLKTRIPP---EI-------------I---------DHERVTVI 57 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC---EEEEEESSHHHHSCH---HH-------------H---------TSTTEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc---eEEEEecCccccchh---hc-------------c---------CCCceEEE
Confidence 579999999999999999999 7886 5689999743 2111 00 0 12678999
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.+|++ +.+.+..+++++|+|||+||.. |+. ++++++++++. ++++||++||..+++...
T Consensus 58 ~~D~~-------d~~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~ 116 (221)
T 3r6d_A 58 EGSFQ-------NPGXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFP 116 (221)
T ss_dssp ECCTT-------CHHHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSC
T ss_pred ECCCC-------CHHHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCC
Confidence 99999 6666678889999999999853 444 89999999987 788999999988876432
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
+...+.. .....+.|..+|..+|+++++
T Consensus 117 ~~~~~~~----------------------------------------------------~~~~~~~y~~~K~~~e~~~~~ 144 (221)
T 3r6d_A 117 VALEKWT----------------------------------------------------FDNLPISYVQGERQARNVLRE 144 (221)
T ss_dssp HHHHHHH----------------------------------------------------HHTSCHHHHHHHHHHHHHHHH
T ss_pred ccccccc----------------------------------------------------ccccccHHHHHHHHHHHHHHh
Confidence 1100000 002234899999999999987
Q ss_pred hcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHH--HhhhcC
Q 037479 251 LKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAV--VAHAKQ 328 (492)
Q Consensus 251 ~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~--~~~~~~ 328 (492)
.+++++++||+.|+++.... ..............+++.+|+|++++.++ .+....
T Consensus 145 --~~i~~~~vrpg~v~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~ 201 (221)
T 3r6d_A 145 --SNLNYTILRLTWLYNDPEXT---------------------DYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPF 201 (221)
T ss_dssp --SCSEEEEEEECEEECCTTCC---------------------CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGG
T ss_pred --CCCCEEEEechhhcCCCCCc---------------------ceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhh
Confidence 78999999999999862210 00011111111224899999999999999 643322
Q ss_pred CCCCCcEEEecCC
Q 037479 329 PSDVNNIYQVGSS 341 (492)
Q Consensus 329 ~~~~~~iy~i~~~ 341 (492)
. ++.+.++++
T Consensus 202 ~---~~~~~i~~~ 211 (221)
T 3r6d_A 202 H---RTSIGVGEP 211 (221)
T ss_dssp T---TEEEEEECT
T ss_pred h---cceeeecCC
Confidence 2 567777755
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-21 Score=182.02 Aligned_cols=217 Identities=19% Similarity=0.158 Sum_probs=152.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ ..++.+
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 56 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGA---KVVAVTRTNSD---LVSLA-------------KE---------CPGIEP 56 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH---------STTCEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------Hh---------ccCCCc
Confidence 5789999999999999999999999996 56888886421 11111 11 134677
Q ss_pred EecCCCCCCCCCCchhhHHHhcc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---c-ce
Q 037479 90 VPGDITREDLGVKDSNLREEMWN---KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---K-LI 155 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~-~~ 155 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.+.. + ..
T Consensus 57 ~~~D~~-------~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~ 129 (244)
T 1cyd_A 57 VCVDLG-------DWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG 129 (244)
T ss_dssp EECCTT-------CHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEecCC-------CHHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe
Confidence 899999 5555556654 58999999996532 24567889999999999999886531 3 57
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
+||++||..++... ....
T Consensus 130 ~iv~~sS~~~~~~~--------------------------------------------------------------~~~~ 147 (244)
T 1cyd_A 130 SIVNVSSMVAHVTF--------------------------------------------------------------PNLI 147 (244)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------------TTBH
T ss_pred EEEEEcchhhcCCC--------------------------------------------------------------CCcc
Confidence 89999997655321 1235
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
.|+.||+..|.+++.+ ..+++++++||+.|+++..... + ....++..+..+ ....++++
T Consensus 148 ~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~-----~~~~~~~~~~~~---------~~~~~~~~ 211 (244)
T 1cyd_A 148 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV--S-----ADPEFARKLKER---------HPLRKFAE 211 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH--T-----CCHHHHHHHHHH---------STTSSCBC
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc--c-----cCHHHHHHHHhc---------CCccCCCC
Confidence 7999999999998765 2589999999999998653210 0 011122222111 12357899
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++|+|++++.++........ ++.+++.++
T Consensus 212 ~~dva~~~~~l~~~~~~~~~--G~~~~v~gG 240 (244)
T 1cyd_A 212 VEDVVNSILFLLSDRSASTS--GGGILVDAG 240 (244)
T ss_dssp HHHHHHHHHHHHSGGGTTCC--SSEEEESTT
T ss_pred HHHHHHHHHHHhCchhhccc--CCEEEECCC
Confidence 99999999999874332222 788988876
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.9e-21 Score=179.29 Aligned_cols=217 Identities=18% Similarity=0.204 Sum_probs=151.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ ..++.+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 56 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGA---RVVAVSRTQAD---LDSLV-------------RE---------CPGIEP 56 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH---------STTCEE
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH---------cCCCCE
Confidence 5789999999999999999999999996 56888886321 11111 11 124567
Q ss_pred EecCCCCCCCCCCchhhHHHhcc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---c-ce
Q 037479 90 VPGDITREDLGVKDSNLREEMWN---KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---K-LI 155 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~-~~ 155 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.+.. + ..
T Consensus 57 ~~~D~~-------~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~ 129 (244)
T 3d3w_A 57 VCVDLG-------DWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG 129 (244)
T ss_dssp EECCTT-------CHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEeCC-------CHHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc
Confidence 799999 5555556654 68999999997542 24567899999999999998886531 3 57
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
++|++||...+... ...+
T Consensus 130 ~iv~~sS~~~~~~~--------------------------------------------------------------~~~~ 147 (244)
T 3d3w_A 130 AIVNVSSQCSQRAV--------------------------------------------------------------TNHS 147 (244)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------------TTBH
T ss_pred EEEEeCchhhccCC--------------------------------------------------------------CCCc
Confidence 89999997554321 1346
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
.|+.||+..|.+++.+ ..+++++++||+.|+++..... +.. . .....+.. ......+++
T Consensus 148 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~--~---~~~~~~~~---------~~~~~~~~~ 211 (244)
T 3d3w_A 148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT--WSD--P---HKAKTMLN---------RIPLGKFAE 211 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHH--SCS--T---THHHHHHH---------TCTTCSCBC
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhh--ccC--h---HHHHHHHh---------hCCCCCCcC
Confidence 8999999999998765 2589999999999988754210 000 0 11111111 111236889
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++|+|++++.++........ +++|++.++
T Consensus 212 ~~dva~~~~~l~~~~~~~~~--G~~~~v~gG 240 (244)
T 3d3w_A 212 VEHVVNAILFLLSDRSGMTT--GSTLPVEGG 240 (244)
T ss_dssp HHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred HHHHHHHHHHHcCccccCCC--CCEEEECCC
Confidence 99999999999874332222 789999887
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6.2e-21 Score=181.80 Aligned_cols=227 Identities=16% Similarity=0.192 Sum_probs=153.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|+ +|+++.|+... .+.+. ++ +..++.+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 58 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGA---TVAIADIDIER---ARQAA-------------AE--------IGPAAYA 58 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH--------HCTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------hCCCceE
Confidence 5789999999999999999999999996 55788875321 11111 11 1256789
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 59 ~~~D~~-------~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (259)
T 4e6p_A 59 VQMDVT-------RQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQ 131 (259)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999 4444445544 79999999997532 25678889999999999999886531
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ -.++|++||...+...
T Consensus 132 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 149 (259)
T 4e6p_A 132 GRGGKIINMASQAGRRGE-------------------------------------------------------------- 149 (259)
T ss_dssp TSCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred CCCeEEEEECChhhccCC--------------------------------------------------------------
Confidence 1 3589999996544221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.+ ..++++.+++|+.|.++....... ..........+.......+.....
T Consensus 150 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~p~~ 222 (259)
T 4e6p_A 150 ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDA-------LFARYENRPRGEKKRLVGEAVPFG 222 (259)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHH-------HHHHHHTCCTTHHHHHHHHHSTTS
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhh-------hhhhhccCChHHHHHHHhccCCCC
Confidence 23468999999999988765 358999999999999875421100 000000000001001112223345
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+.+++|+|++++.++........ +++|++.++
T Consensus 223 r~~~~~dva~~v~~L~s~~~~~it--G~~i~vdgG 255 (259)
T 4e6p_A 223 RMGTAEDLTGMAIFLASAESDYIV--SQTYNVDGG 255 (259)
T ss_dssp SCBCTHHHHHHHHHTTSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCCccCCCC--CCEEEECcC
Confidence 789999999999888764333222 889999988
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.2e-21 Score=176.39 Aligned_cols=183 Identities=17% Similarity=0.165 Sum_probs=137.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+||||||+||++++++|++. +|+++.|+... .+.+. ++. .. .++.+
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~~~---~~~~~-------------~~~---------~~-~~~~~ 49 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRAGA---LAELA-------------REV---------GA-RALPA 49 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCHHH---HHHHH-------------HHH---------TC-EECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCHHH---HHHHH-------------Hhc---------cC-cEEEe
Confidence 68999999999999999999986 67888885321 11111 110 12 78899
Q ss_pred CCCCCCCCCCchhhHHHhcc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 93 DITREDLGVKDSNLREEMWN---KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++++. +..+||++||
T Consensus 50 D~~-------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS 121 (207)
T 2yut_A 50 DLA-------DELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGA 121 (207)
T ss_dssp CTT-------SHHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECC
T ss_pred eCC-------CHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcC
Confidence 999 5555556666 89999999997543 2457788999999999999999654 6789999999
Q ss_pred ceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 163 AFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 163 ~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
..++... .+.+.|+.||+
T Consensus 122 ~~~~~~~--------------------------------------------------------------~~~~~Y~~sK~ 139 (207)
T 2yut_A 122 YPRYVQV--------------------------------------------------------------PGFAAYAAAKG 139 (207)
T ss_dssp CHHHHSS--------------------------------------------------------------TTBHHHHHHHH
T ss_pred hhhccCC--------------------------------------------------------------CCcchHHHHHH
Confidence 7665321 23468999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhH
Q 037479 243 MGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNA 317 (492)
Q Consensus 243 ~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ 317 (492)
..|.+++.+ ..+++++++||+.|+++... +.+....++++++|+|++
T Consensus 140 a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~----------------------------~~~~~~~~~~~~~dva~~ 191 (207)
T 2yut_A 140 ALEAYLEAARKELLREGVHLVLVRLPAVATGLWA----------------------------PLGGPPKGALSPEEAARK 191 (207)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG----------------------------GGTSCCTTCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc----------------------------ccCCCCCCCCCHHHHHHH
Confidence 999998765 25899999999999876410 011223578999999999
Q ss_pred HHHHHHh
Q 037479 318 IVVAVVA 324 (492)
Q Consensus 318 ii~~~~~ 324 (492)
++.++.+
T Consensus 192 ~~~~~~~ 198 (207)
T 2yut_A 192 VLEGLFR 198 (207)
T ss_dssp HHHHHC-
T ss_pred HHHHHhC
Confidence 9999874
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-20 Score=176.93 Aligned_cols=223 Identities=17% Similarity=0.155 Sum_probs=153.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+. +.++.. ..++.+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~---------~~~~~~ 66 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA---RVIIADLDEAM---ATKAV---------EDLRME---------GHDVSS 66 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCceEE
Confidence 5789999999999999999999999996 56888886421 11111 111111 256899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccC-c-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTN-F-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+.+|++ +.+..+.+++ ++|+|||+||... . .+.+...+++|+.|+.++++++.+.
T Consensus 67 ~~~D~~-------~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 139 (260)
T 3awd_A 67 VVMDVT-------NTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLE 139 (260)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhh
Confidence 999999 4444445543 7999999999654 1 1346788999999999999988652
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||.+.+.... .
T Consensus 140 ~~~~~iv~~sS~~~~~~~~------------------------------------------------------------~ 159 (260)
T 3awd_A 140 QKQGVIVAIGSMSGLIVNR------------------------------------------------------------P 159 (260)
T ss_dssp HTCEEEEEECCGGGTSCCS------------------------------------------------------------S
T ss_pred cCCCEEEEEecchhcccCC------------------------------------------------------------C
Confidence 1457899999975442210 0
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.+...|+.||+..|.+++.+ ..+++++++||+.|+++...+ .+ . ...+...+..+ ....
T Consensus 160 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~--~~----~-~~~~~~~~~~~---------~~~~ 223 (260)
T 3awd_A 160 QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF--GM----E-KPELYDAWIAG---------TPMG 223 (260)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH--HH----T-CHHHHHHHHHT---------CTTS
T ss_pred CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc--cc----C-ChHHHHHHHhc---------CCcC
Confidence 12368999999999998765 258999999999999876531 00 0 01111111111 1123
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|++++.++........ +++|++.++
T Consensus 224 ~~~~~~dva~~~~~l~~~~~~~~~--G~~~~v~gg 256 (260)
T 3awd_A 224 RVGQPDEVASVVQFLASDAASLMT--GAIVNVDAG 256 (260)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCchhccCC--CcEEEECCc
Confidence 578999999999998864332222 789999887
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-20 Score=175.18 Aligned_cols=207 Identities=18% Similarity=0.158 Sum_probs=150.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|+ +|+++.|+..... ..++.+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~------------------------------~~~~~~ 72 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNY---RVVATSRSIKPSA------------------------------DPDIHT 72 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSCCCCS------------------------------STTEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChhhcc------------------------------cCceEE
Confidence 5789999999999999999999999996 5688888754321 146889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 73 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 145 (260)
T 3un1_A 73 VAGDIS-------KPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ 145 (260)
T ss_dssp EESCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEccCC-------CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 999999 5554545544 79999999997532 2457888999999999999987321 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||..+..... ..
T Consensus 146 ~~g~iv~isS~~~~~~~~------------------------------------------------------------~~ 165 (260)
T 3un1_A 146 GSGHIVSITTSLVDQPMV------------------------------------------------------------GM 165 (260)
T ss_dssp TCEEEEEECCTTTTSCBT------------------------------------------------------------TC
T ss_pred CCcEEEEEechhhccCCC------------------------------------------------------------CC
Confidence 457899999965543211 02
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
+...|+.||+..|.+.+.+ ..++++.+++|+.|.++...+ .....+ ........
T Consensus 166 ~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---------~~~~~~------------~~~~p~~r 224 (260)
T 3un1_A 166 PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA---------ETHSTL------------AGLHPVGR 224 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG---------GGHHHH------------HTTSTTSS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH---------HHHHHH------------hccCCCCC
Confidence 3468999999999988765 348999999999999875421 000111 11122345
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.+.. ..... |+++++.+|
T Consensus 225 ~~~~~dva~av~~L~~-~~~it---G~~i~vdGG 254 (260)
T 3un1_A 225 MGEIRDVVDAVLYLEH-AGFIT---GEILHVDGG 254 (260)
T ss_dssp CBCHHHHHHHHHHHHH-CTTCC---SCEEEESTT
T ss_pred CcCHHHHHHHHHHhcc-cCCCC---CcEEEECCC
Confidence 7789999999998832 22122 889999987
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=182.22 Aligned_cols=240 Identities=13% Similarity=0.099 Sum_probs=161.8
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+. ..+.+.. ..++.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~ 79 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA---QCVIASRKMDV---LKATA---------EQISSQT--------GNKVH 79 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHHH--------SSCEE
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHHhc--------CCceE
Confidence 36789999999999999999999999996 56888886421 11111 1111111 25789
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 80 ~~~~Dl~-------~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 152 (302)
T 1w6u_A 80 AIQCDVR-------DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK 152 (302)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999 4444444443 56999999996432 2457788999999999998887642
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..+||++||.+.+...
T Consensus 153 ~~~~~~iv~isS~~~~~~~------------------------------------------------------------- 171 (302)
T 1w6u_A 153 AQKGAAFLSITTIYAETGS------------------------------------------------------------- 171 (302)
T ss_dssp TTCCEEEEEECCTHHHHCC-------------------------------------------------------------
T ss_pred hcCCCEEEEEcccccccCC-------------------------------------------------------------
Confidence 134789999997654321
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCC-CCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYK-EPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~-~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..|.+++.+ ..+++++++||+.|.++.. .... . .. .....+..+ ..
T Consensus 172 -~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~--~~--~~~~~~~~~---------~p 234 (302)
T 1w6u_A 172 -GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD---P--TG--TFEKEMIGR---------IP 234 (302)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CC---T--TS--HHHHHHHTT---------CT
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcc---c--ch--hhHHHHHhc---------CC
Confidence 23468999999999998765 2589999999999988632 1110 0 00 000111111 11
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~ 360 (492)
...+++++|+|++++.++........ +++|++.++ ..+++.++.+.+.+..+
T Consensus 235 ~~~~~~~~dva~~~~~l~~~~~~~~~--G~~~~v~gg--~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 235 CGRLGTVEELANLAAFLCSDYASWIN--GAVIKFDGG--EEVLISGEFNDLRKVTK 286 (302)
T ss_dssp TSSCBCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT--HHHHHHSTTGGGGGCCH
T ss_pred cCCCCCHHHHHHHHHHHcCCcccccC--CCEEEECCC--eeeccCCccccchhhcc
Confidence 22578899999999988864332222 789999998 67787777766655544
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-20 Score=178.77 Aligned_cols=245 Identities=14% Similarity=0.116 Sum_probs=152.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.++ +..... ...++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~~------~~~~~~~ 62 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGA---KVTITGRHAER---LEETRQQ---------ILAAGV------SEQNVNS 62 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHTTC------CGGGEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhccc------CCCceeE
Confidence 5789999999999999999999999996 56888886321 1111111 110000 0246889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccC-----------cchhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTN-----------FDERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~-----------~~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+.+|++ +.+..+.+++ ++|+|||+||... ..+.++..+++|+.|+.++++++...
T Consensus 63 ~~~D~~-------~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 135 (278)
T 1spx_A 63 VVADVT-------TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH 135 (278)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EecccC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999 5544545554 8999999999753 22456788999999999999988654
Q ss_pred c---cceeEEEeeecee-ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 152 A---KLIVLVHVSTAFV-WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 152 ~---~~~~~V~vST~~v-~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
. + .++|++||... +...
T Consensus 136 ~~~~~-g~iv~isS~~~~~~~~---------------------------------------------------------- 156 (278)
T 1spx_A 136 LSSTK-GEIVNISSIASGLHAT---------------------------------------------------------- 156 (278)
T ss_dssp HHHHT-CEEEEECCTTSSSSCC----------------------------------------------------------
T ss_pred HhhcC-CeEEEEecccccccCC----------------------------------------------------------
Confidence 1 3 68999999754 3211
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..|.+.+.+ ..+++++++||+.|.++.......-.............+... .
T Consensus 157 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~---- 224 (278)
T 1spx_A 157 ----PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC----V---- 224 (278)
T ss_dssp ----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH----C----
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc----C----
Confidence 12357999999999988765 358999999999998875421100000000000001111100 0
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcC-CCCCCcEEEecCCCCCcccHHHHHHHHHHH
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQ-PSDVNNIYQVGSSLRNPLIYTNLQDYAYRY 358 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~-~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~ 358 (492)
....+++++|+|++++.++...... .. ++++++.++ ..+++.++++.+.+.
T Consensus 225 -p~~~~~~~~dvA~~v~~l~s~~~~~~~t--G~~~~vdgG--~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 225 -PAGVMGQPQDIAEVIAFLADRKTSSYII--GHQLVVDGG--SSLIMGLHCQDFAKL 276 (278)
T ss_dssp -TTSSCBCHHHHHHHHHHHHCHHHHTTCC--SCEEEESTT--GGGC-----------
T ss_pred -CCcCCCCHHHHHHHHHHHcCccccCccc--CcEEEECCC--cccccCcccccHHHH
Confidence 1124789999999999888643322 21 789999998 789999999887664
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=177.90 Aligned_cols=220 Identities=17% Similarity=0.166 Sum_probs=149.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.+ .+.+. ...++.+
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~--------~~~~~~~ 61 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS---TVIITGTSGER---AKAVAE---------EIANK--------YGVKAHG 61 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHH---------HHHHH--------HCCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHHH---------HHHhh--------cCCceEE
Confidence 5789999999999999999999999996 56888886321 111111 11110 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 62 ~~~D~~-------~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (248)
T 2pnf_A 62 VEMNLL-------SEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ 134 (248)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH
T ss_pred EEccCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 999999 4544545554 79999999997542 2456788999999997777765431 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||....... .
T Consensus 135 ~~~~iv~~sS~~~~~~~--------------------------------------------------------------~ 152 (248)
T 2pnf_A 135 RWGRIVNISSVVGFTGN--------------------------------------------------------------V 152 (248)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------------T
T ss_pred CCcEEEEEccHHhcCCC--------------------------------------------------------------C
Confidence 56799999996543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+.+.+ ..+++++++||+.|.++.....+ ......+..+ .....
T Consensus 153 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~---------~~~~~ 214 (248)
T 2pnf_A 153 GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS---------EEIKQKYKEQ---------IPLGR 214 (248)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---------HHHHHHHHHT---------CTTSS
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc---------HHHHHHHHhc---------CCCCC
Confidence 2357999999999888755 35899999999999876542211 1111111110 11235
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+|++++.++....... . +++|++.++
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~~-~-G~~~~v~gg 246 (248)
T 2pnf_A 215 FGSPEEVANVVLFLCSELASYI-T-GEVIHVNGG 246 (248)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred ccCHHHHHHHHHHHhCchhhcC-C-CcEEEeCCC
Confidence 7899999999999886432222 2 789999876
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7e-20 Score=174.12 Aligned_cols=220 Identities=15% Similarity=0.152 Sum_probs=153.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec-CCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA-ADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~-~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++|+||||||+|+||++++++|++.|+ +|+++.|+ ... .+.+.++ ++.. ..++.
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~---~~~~~~~---------~~~~---------~~~~~ 60 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGA---KVGLHGRKAPAN---IDETIAS---------MRAD---------GGDAA 60 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCCTT---HHHHHHH---------HHHT---------TCEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEECCCchhh---HHHHHHH---------HHhc---------CCceE
Confidence 5789999999999999999999999996 56888887 332 1222111 1111 25788
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccc-cCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAAT-TNF-------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~-~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
++.+|++ +.+..+.+++ ++|+|||+||. ... .+.++..+++|+.|+.++++++....
T Consensus 61 ~~~~D~~-------~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 133 (258)
T 3afn_B 61 FFAADLA-------TSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLA 133 (258)
T ss_dssp EEECCTT-------SHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 9999999 5554555555 79999999996 321 13467789999999999988775321
Q ss_pred --c--c---eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhc
Q 037479 153 --K--L---IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGI 225 (492)
Q Consensus 153 --~--~---~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (492)
+ . .++|++||.+.+....
T Consensus 134 ~~~~~~~~~~~iv~~sS~~~~~~~~------------------------------------------------------- 158 (258)
T 3afn_B 134 AAAKASGQTSAVISTGSIAGHTGGG------------------------------------------------------- 158 (258)
T ss_dssp HHHHHHTSCEEEEEECCTHHHHCCC-------------------------------------------------------
T ss_pred hcccCCCCCcEEEEecchhhccCCC-------------------------------------------------------
Confidence 1 2 6899999976543110
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEec
Q 037479 226 KRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300 (492)
Q Consensus 226 ~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~ 300 (492)
.....|+.||+..|.+++.+ ..+++++++||+.|.++..... ...+...+..+
T Consensus 159 ------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~------- 216 (258)
T 3afn_B 159 ------PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---------TQDVRDRISNG------- 216 (258)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---------CHHHHHHHHTT-------
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---------CHHHHHHHhcc-------
Confidence 23468999999999998765 3489999999999998764321 11122222211
Q ss_pred CCCcccceeehhhhhhHHHHHHHhhhc-CCCCCCcEEEecCC
Q 037479 301 DVKGIVDVIPADMVVNAIVVAVVAHAK-QPSDVNNIYQVGSS 341 (492)
Q Consensus 301 ~~~~~~d~v~vddva~~ii~~~~~~~~-~~~~~~~iy~i~~~ 341 (492)
.....+++++|+|++++.++..... ... +++|++.++
T Consensus 217 --~~~~~~~~~~dva~~~~~l~~~~~~~~~~--G~~~~v~gg 254 (258)
T 3afn_B 217 --IPMGRFGTAEEMAPAFLFFASHLASGYIT--GQVLDINGG 254 (258)
T ss_dssp --CTTCSCBCGGGTHHHHHHHHCHHHHTTCC--SEEEEESTT
T ss_pred --CCCCcCCCHHHHHHHHHHHhCcchhcccc--CCEEeECCC
Confidence 1223689999999999998865332 222 789999887
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-20 Score=177.89 Aligned_cols=233 Identities=12% Similarity=0.051 Sum_probs=149.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.+++...... . .....++.+
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~~~~~~~~----~-------~~~~~~~~~ 67 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGA---TVAACDLDRAA---AQETVRLLGGPGSK----E-------GPPRGNHAA 67 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHTC-----------------------CCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHHHHHHhcCcc----c-------cccCcceEE
Confidence 5789999999999999999999999996 56888886421 11111111000000 0 000146789
Q ss_pred EecCCCCCCCCCCchhhHHHhccC-------c-cEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMWNK-------L-DVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~-------v-d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|++ +.+..+.++++ + |+|||+||.... .+.++..+++|+.|+.++++++.+..
T Consensus 68 ~~~D~~-------~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 140 (264)
T 2pd6_A 68 FQADVS-------EARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVS 140 (264)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHh
Confidence 999999 44444455443 4 999999997643 24577889999999999999887641
Q ss_pred -c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 153 -K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 153 -~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
+ ..+||++||.......
T Consensus 141 ~~~~g~iv~isS~~~~~~~------------------------------------------------------------- 159 (264)
T 2pd6_A 141 NGCRGSIINISSIVGKVGN------------------------------------------------------------- 159 (264)
T ss_dssp HTCCEEEEEECCTHHHHCC-------------------------------------------------------------
T ss_pred cCCCceEEEECChhhccCC-------------------------------------------------------------
Confidence 2 4689999996543211
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..|.+.+.+ ..+++++++||+.|+++.....+. .+...+..+ ...
T Consensus 160 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~---------~~~ 220 (264)
T 2pd6_A 160 -VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ---------KVVDKITEM---------IPM 220 (264)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------------CTGGG---------CTT
T ss_pred -CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH---------HHHHHHHHh---------CCC
Confidence 13468999999998887765 358999999999999876532110 111111111 111
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHH
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTN 350 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e 350 (492)
..+++++|+|++++.++....... . ++.+++.++ ..+++..
T Consensus 221 ~~~~~~~dva~~~~~l~~~~~~~~-~-G~~~~v~gg--~~~~~~~ 261 (264)
T 2pd6_A 221 GHLGDPEDVADVVAFLASEDSGYI-T-GTSVEVTGG--LFMAENL 261 (264)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT--C------
T ss_pred CCCCCHHHHHHHHHHHcCCcccCC-C-CCEEEECCC--ceecccc
Confidence 257889999999999886433222 2 789999988 5554443
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.84 E-value=6.9e-20 Score=175.17 Aligned_cols=219 Identities=18% Similarity=0.139 Sum_probs=139.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ..+... ..++.+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~---------~~~~~~ 67 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA---VIHTCARNEYE---LNECL---------SKWQKK---------GFQVTG 67 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCeeEE
Confidence 5789999999999999999999999996 56888886321 11111 111111 246889
Q ss_pred EecCCCCCCCCCCchhhHHHhc--------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----h
Q 037479 90 VPGDITREDLGVKDSNLREEMW--------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK----K 150 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~--------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~ 150 (492)
+.+|++ +.+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++. +
T Consensus 68 ~~~D~~-------~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 140 (266)
T 1xq1_A 68 SVCDAS-------LRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA 140 (266)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999999 444444444 578999999997532 24567889999999999999884 3
Q ss_pred cccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 151 CAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 151 ~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
. +..++|++||..++...
T Consensus 141 ~-~~~~iv~isS~~~~~~~------------------------------------------------------------- 158 (266)
T 1xq1_A 141 S-GCGNIIFMSSIAGVVSA------------------------------------------------------------- 158 (266)
T ss_dssp H-SSCEEEEEC---------------------------------------------------------------------
T ss_pred c-CCcEEEEEccchhccCC-------------------------------------------------------------
Confidence 3 56799999997655321
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..|.+++.+ ..+++++++||+.|+++...... . ..+...+.. ....
T Consensus 159 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~-----~~~~~~~~~---------~~~~ 220 (266)
T 1xq1_A 159 -SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---D-----DEFKKVVIS---------RKPL 220 (266)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------------------
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc---C-----HHHHHHHHh---------cCCC
Confidence 13468999999999988765 34899999999999987653210 0 001100000 0111
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+++++|+|++++.++........ ++++++.++
T Consensus 221 ~~~~~~~dva~~~~~l~~~~~~~~~--G~~~~v~gG 254 (266)
T 1xq1_A 221 GRFGEPEEVSSLVAFLCMPAASYIT--GQTICVDGG 254 (266)
T ss_dssp ---CCGGGGHHHHHHHTSGGGTTCC--SCEEECCCC
T ss_pred CCCcCHHHHHHHHHHHcCccccCcc--CcEEEEcCC
Confidence 2478899999999988864332222 789999987
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-20 Score=177.97 Aligned_cols=228 Identities=15% Similarity=0.163 Sum_probs=153.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|... ...+.+. ..++. ...++.+
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~---------~~l~~---------~~~~~~~ 75 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGA---SVVVNYGSSS--KAAEEVV---------AELKK---------LGAQGVA 75 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHH---------HHHHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCch--HHHHHHH---------HHHHh---------cCCcEEE
Confidence 5789999999999999999999999996 5688888321 1111111 11111 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhccc-c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCAK-L 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~ 154 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.+... -
T Consensus 76 ~~~D~~-------~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 148 (274)
T 1ja9_A 76 IQADIS-------KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG 148 (274)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999 5444445554 79999999997542 145678899999999999999876421 1
Q ss_pred eeEEEeeeceee-cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 155 IVLVHVSTAFVW-GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 155 ~~~V~vST~~v~-~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
.+||++||..++ ... ..
T Consensus 149 ~~iv~~sS~~~~~~~~--------------------------------------------------------------~~ 166 (274)
T 1ja9_A 149 GRIILTSSIAAVMTGI--------------------------------------------------------------PN 166 (274)
T ss_dssp EEEEEECCGGGTCCSC--------------------------------------------------------------CS
T ss_pred CEEEEEcChHhccCCC--------------------------------------------------------------CC
Confidence 689999997665 221 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCC-----CCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEP-----FPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p-----~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
...|+.||+..|.+++.+ ..+++++++||+.|.++.... .+....... .......+. ...
T Consensus 167 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~ 236 (274)
T 1ja9_A 167 HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP-QEKIDEGLA---------NMN 236 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC-HHHHHHHHH---------HTS
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCc-hHHHHHHHH---------hcC
Confidence 457999999999998765 358999999999998764321 000000100 011111111 122
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...++++++|+|++++.++........ +++|+++++
T Consensus 237 ~~~~~~~~~dva~~i~~l~~~~~~~~~--G~~~~v~gG 272 (274)
T 1ja9_A 237 PLKRIGYPADIGRAVSALCQEESEWIN--GQVIKLTGG 272 (274)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCccCHHHHHHHHHHHhCccccccc--CcEEEecCC
Confidence 234689999999999998864332211 789999886
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.2e-20 Score=177.04 Aligned_cols=245 Identities=18% Similarity=0.205 Sum_probs=167.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|. +|+++.|+... .+...++ +++..+ ...++.+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~~~------~~~~~~~ 67 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA---SVMIVGRNPDK---LAGAVQE---------LEALGA------NGGAIRY 67 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHTTCC------SSCEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHHhCC------CCceEEE
Confidence 6789999999999999999999999996 56888886432 1111111 111100 0137899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTN----F----DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|++ +.+..+.+++ ++|++||+||... + .+.++..+++|+.|+.++++++....
T Consensus 68 ~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 140 (281)
T 3svt_A 68 EPTDIT-------NEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVR 140 (281)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999999 4444444443 6899999999622 1 24577899999999999999886541
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|++||...+...
T Consensus 141 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 158 (281)
T 3svt_A 141 GGGGSFVGISSIAASNTH-------------------------------------------------------------- 158 (281)
T ss_dssp TTCEEEEEECCHHHHSCC--------------------------------------------------------------
T ss_pred cCCcEEEEEeCHHHcCCC--------------------------------------------------------------
Confidence 23489999997654321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.+ ..++++.+++|+.|.++..... . ........+..+ ....
T Consensus 159 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~----~~~~~~~~~~~~---------~p~~ 222 (281)
T 3svt_A 159 RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI---T----ESAELSSDYAMC---------TPLP 222 (281)
T ss_dssp TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH---H----TCHHHHHHHHHH---------CSSS
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc---c----cCHHHHHHHHhc---------CCCC
Confidence 23468999999999998765 4579999999999987654211 0 001111111111 1122
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCccc-HHHHHHHHHHHhhcCCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLI-YTNLQDYAYRYFTKKPW 364 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t-~~e~~~~~~~~~~~~p~ 364 (492)
.+..++|+|++++.++........ ++++++.++ ..++ ..++.+.+.+.++..++
T Consensus 223 r~~~~~dva~~~~~l~s~~~~~it--G~~~~vdgG--~~~~~~~~~~~~~~~~~~~~~~ 277 (281)
T 3svt_A 223 RQGEVEDVANMAMFLLSDAASFVT--GQVINVDGG--QMLRRGPDFSAMLEPVFGRDAL 277 (281)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT--GGGSCCCCCHHHHHHHHCTTGG
T ss_pred CCCCHHHHHHHHHHHhCcccCCCC--CCEEEeCCC--hhcccCCcchhccccccCCccc
Confidence 467899999999998875433222 889999988 5555 67888888888887653
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.8e-20 Score=168.15 Aligned_cols=183 Identities=17% Similarity=0.206 Sum_probs=135.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+||||||+||++++++|+ .|+ +|+++.|+.. .+.+
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~---~V~~~~r~~~--------------------------------------~~~~ 41 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKA---EVITAGRHSG--------------------------------------DVTV 41 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTS---EEEEEESSSS--------------------------------------SEEC
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCC---eEEEEecCcc--------------------------------------ceee
Confidence 489999999999999999999 886 5688888532 3678
Q ss_pred CCCCCCCCCCchhhHHHhcc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-cceeEEEee
Q 037479 93 DITREDLGVKDSNLREEMWN---KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-KLIVLVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~V~vS 161 (492)
|++ +.+..+.+++ ++|+|||+||.... .+.+...+++|+.|+.++++++.+.. .-.+||++|
T Consensus 42 D~~-------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 114 (202)
T 3d7l_A 42 DIT-------NIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTT 114 (202)
T ss_dssp CTT-------CHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEEC
T ss_pred ecC-------CHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEc
Confidence 999 4554555555 48999999996532 14456788999999999999998752 126899999
Q ss_pred eceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHH
Q 037479 162 TAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241 (492)
Q Consensus 162 T~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK 241 (492)
|...+... .....|+.||
T Consensus 115 S~~~~~~~--------------------------------------------------------------~~~~~Y~~sK 132 (202)
T 3d7l_A 115 GIMMEDPI--------------------------------------------------------------VQGASAAMAN 132 (202)
T ss_dssp CGGGTSCC--------------------------------------------------------------TTCHHHHHHH
T ss_pred chhhcCCC--------------------------------------------------------------CccHHHHHHH
Confidence 96543221 2346899999
Q ss_pred HHHHHHHHHhc----CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhH
Q 037479 242 VMGEMFIEHLK----ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNA 317 (492)
Q Consensus 242 ~~aE~~v~~~~----~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ 317 (492)
+..|.+++.+. .+++++++||+.|+++... . ++.....++++++|+|++
T Consensus 133 ~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------------~---------~~~~~~~~~~~~~dva~~ 185 (202)
T 3d7l_A 133 GAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK------------------L---------EPFFEGFLPVPAAKVARA 185 (202)
T ss_dssp HHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH------------------H---------GGGSTTCCCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCeEEEEEecCccCCchhh------------------h---------hhhccccCCCCHHHHHHH
Confidence 99999998763 4899999999999876421 0 011123478999999999
Q ss_pred HHHHHHhhhcCCCCCCcEEEe
Q 037479 318 IVVAVVAHAKQPSDVNNIYQV 338 (492)
Q Consensus 318 ii~~~~~~~~~~~~~~~iy~i 338 (492)
++.++. . ... +++||+
T Consensus 186 ~~~~~~-~-~~~---G~~~~v 201 (202)
T 3d7l_A 186 FEKSVF-G-AQT---GESYQV 201 (202)
T ss_dssp HHHHHH-S-CCC---SCEEEE
T ss_pred HHHhhh-c-ccc---CceEec
Confidence 988773 2 112 778886
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-20 Score=173.28 Aligned_cols=204 Identities=13% Similarity=0.118 Sum_probs=148.3
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+||||||||+||++++++|++.|+ +|+++.|+... +++.++.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~~---------------------------------~~~~~~~ 45 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGY---RVVVLDLRREG---------------------------------EDLIYVE 45 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSCCS---------------------------------SSSEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEccCccc---------------------------------cceEEEe
Confidence 68999999999999999999999996 56888887541 3457899
Q ss_pred cCCCCCCCCCCchhhHHHhcc------CccEEEEcccccCcc-------h----hHHHHHHHhHHHHHHHHHHHHhccc-
Q 037479 92 GDITREDLGVKDSNLREEMWN------KLDVVINLAATTNFD-------E----RYDVALDLNTFGAKHVLNFSKKCAK- 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~~~~-------~----~~~~~~~~Nv~gt~~ll~~a~~~~~- 153 (492)
+|++ +.+..+.+++ ++|+|||+||..... + .++..+++|+.|+.++++++.+...
T Consensus 46 ~D~~-------~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 118 (242)
T 1uay_A 46 GDVT-------REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRE 118 (242)
T ss_dssp CCTT-------CHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCCC-------CHHHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 9999 5554555555 799999999975421 1 6788899999999999998876421
Q ss_pred --------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhc
Q 037479 154 --------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGI 225 (492)
Q Consensus 154 --------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (492)
..+||++||...+...
T Consensus 119 ~~~~~~~~~~~iv~~sS~~~~~~~-------------------------------------------------------- 142 (242)
T 1uay_A 119 NPPDAEGQRGVIVNTASVAAFEGQ-------------------------------------------------------- 142 (242)
T ss_dssp CCCCTTSCSEEEEEECCTHHHHCC--------------------------------------------------------
T ss_pred cCCCCCCCCeEEEEeCChhhccCC--------------------------------------------------------
Confidence 1389999997665432
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEec
Q 037479 226 KRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300 (492)
Q Consensus 226 ~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~ 300 (492)
.....|+.||+..|.+.+.+ ..+++++++||+.|+++.....+ ..+...+..+.. .
T Consensus 143 ------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~~----~ 203 (242)
T 1uay_A 143 ------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---------EKAKASLAAQVP----F 203 (242)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---------HHHHHHHHTTCC----S
T ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc---------hhHHHHHHhhCC----C
Confidence 23468999999999887654 34899999999999887542211 111111111110 0
Q ss_pred CCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 301 ~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+++++|+|++++.++.. .... +++|++.++
T Consensus 204 ----~~~~~~~~dva~~~~~l~~~-~~~~---G~~~~v~gG 236 (242)
T 1uay_A 204 ----PPRLGRPEEYAALVLHILEN-PMLN---GEVVRLDGA 236 (242)
T ss_dssp ----SCSCCCHHHHHHHHHHHHHC-TTCC---SCEEEESTT
T ss_pred ----cccCCCHHHHHHHHHHHhcC-CCCC---CcEEEEcCC
Confidence 02478899999999998874 2222 789999887
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=172.22 Aligned_cols=210 Identities=14% Similarity=0.111 Sum_probs=148.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ +..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 57 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGA---KVVFGDILDEE---GKAMA-------------AE--------LADAARY 57 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH--------TGGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------hhcCceE
Confidence 5789999999999999999999999996 56888886421 11111 11 1135788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK----KC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~ 151 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+. +.
T Consensus 58 ~~~D~~-------~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 130 (260)
T 1nff_A 58 VHLDVT-------QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA 130 (260)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999 4554545554 79999999997542 24577899999999977766553 33
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||...+...
T Consensus 131 -~~g~iv~isS~~~~~~~-------------------------------------------------------------- 147 (260)
T 1nff_A 131 -GRGSIINISSIEGLAGT-------------------------------------------------------------- 147 (260)
T ss_dssp -TCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred -CCCEEEEEeehhhcCCC--------------------------------------------------------------
Confidence 45799999997654321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.+ ..+++++++||+.|.++... .. .. . +. .....
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~---~~-----~----~~----------~~~~~ 204 (260)
T 1nff_A 148 VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WV---PE-----D----IF----------QTALG 204 (260)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TS---CT-----T----CS----------CCSSS
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cc---hh-----h----HH----------hCccC
Confidence 12358999999999988765 35899999999999987542 10 00 0 00 00112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|++++.++....... . +++|++.++
T Consensus 205 ~~~~~~dvA~~v~~l~s~~~~~~-~-G~~~~v~gG 237 (260)
T 1nff_A 205 RAAEPVEVSNLVVYLASDESSYS-T-GAEFVVDGG 237 (260)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCccccCC-c-CCEEEECCC
Confidence 56889999999999886433222 2 789999988
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-19 Score=171.95 Aligned_cols=230 Identities=17% Similarity=0.160 Sum_probs=152.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|+ +|+++.|+... .+.+. ..+.... ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~~ 61 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA---HIVLVARQVDR---LHEAA---------RSLKEKF--------GVRVLE 61 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHHH--------CCCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH---------HHHHHhc--------CCceEE
Confidence 5789999999999999999999999996 56888886421 11111 1111110 246889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 62 ~~~D~~-------~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 134 (263)
T 3ai3_A 62 VAVDVA-------TPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR 134 (263)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 999999 4444445544 79999999997532 2457788999999999999887542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 135 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 152 (263)
T 3ai3_A 135 GGGAIIHNASICAVQPL--------------------------------------------------------------W 152 (263)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCcEEEEECchhhcCCC--------------------------------------------------------------C
Confidence 45799999997655321 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-CccccCcCc-hHHHHHhccCceeeEEecCCCcc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-PGWAEGIRT-IDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~gw~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
....|+.||+..|.+.+.+ ..+++++++||+.|.++..... +.+...... .......+..+. ...
T Consensus 153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~p~ 224 (263)
T 3ai3_A 153 YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH--------API 224 (263)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH--------CTT
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC--------CCC
Confidence 2458999999999988765 3589999999999998753210 000000000 011111111100 112
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+++++|+|++++.++....... . +++|++.++
T Consensus 225 ~~~~~~~dvA~~~~~l~s~~~~~~-~-G~~~~vdgG 258 (263)
T 3ai3_A 225 KRFASPEELANFFVFLCSERATYS-V-GSAYFVDGG 258 (263)
T ss_dssp CSCBCHHHHHHHHHHHTSTTCTTC-C-SCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHcCccccCC-C-CcEEEECCC
Confidence 357899999999998886322222 2 789999988
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-20 Score=174.05 Aligned_cols=219 Identities=18% Similarity=0.204 Sum_probs=141.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.+.... ..+.+.++ ++. ...++.+
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~---~V~~~~~r~~~--~~~~~~~~---------~~~---------~~~~~~~ 59 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA---NIVLNGSPAST--SLDATAEE---------FKA---------AGINVVV 59 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECTTCS--HHHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCcCHH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 4689999999999999999999999996 45777333221 12222111 111 0256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.+. .
T Consensus 60 ~~~D~~-------~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 132 (247)
T 2hq1_A 60 AKGDVK-------NPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ 132 (247)
T ss_dssp EESCTT-------SHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999 4444445444 79999999997542 2346788999999999988887642 1
Q ss_pred cceeEEEeeecee-ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 KLIVLVHVSTAFV-WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~~~~~V~vST~~v-~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..+||++||... ++.
T Consensus 133 ~~~~iv~~sS~~~~~~~--------------------------------------------------------------- 149 (247)
T 2hq1_A 133 KSGKIINITSIAGIIGN--------------------------------------------------------------- 149 (247)
T ss_dssp TCEEEEEECC----------------------------------------------------------------------
T ss_pred CCcEEEEEcChhhccCC---------------------------------------------------------------
Confidence 4579999999643 321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.+ ..++++++++|+.+.++.....+ ......+.. .....
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~---------~~~~~ 211 (247)
T 2hq1_A 150 AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP---------DKVKEMYLN---------NIPLK 211 (247)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---------HHHHHHHHT---------TSTTS
T ss_pred CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc---------hHHHHHHHh---------hCCCC
Confidence 12468999999999988765 34899999999988765321111 111111111 11223
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|++++.++........ +++|+++++
T Consensus 212 ~~~~~~dva~~~~~l~~~~~~~~~--G~~~~v~gG 244 (247)
T 2hq1_A 212 RFGTPEEVANVVGFLASDDSNYIT--GQVINIDGG 244 (247)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCHHHHHHHHHHHcCccccccc--CcEEEeCCC
Confidence 578999999999988864322222 789999887
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9e-20 Score=173.06 Aligned_cols=220 Identities=14% Similarity=0.111 Sum_probs=149.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce-E
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI-T 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v-~ 88 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ +..++ .
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 61 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGA---RLILIDREAAA---LDRAA-------------QE--------LGAAVAA 61 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH--------HGGGEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------hccccee
Confidence 5789999999999999999999999996 56888886421 11111 11 01355 8
Q ss_pred EEecCCCCCCCCCCchhhHHHhc------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 89 LVPGDITREDLGVKDSNLREEMW------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
++.+|++ +.+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 62 ~~~~D~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (254)
T 2wsb_A 62 RIVADVT-------DAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR 134 (254)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecC-------CHHHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 8999999 444444444 579999999997543 1456788999999988877765431 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||...+.... ..
T Consensus 135 ~~~~iv~isS~~~~~~~~------------------------------------------------------------~~ 154 (254)
T 2wsb_A 135 GAGAIVNLGSMSGTIVNR------------------------------------------------------------PQ 154 (254)
T ss_dssp TCEEEEEECCGGGTSCCS------------------------------------------------------------SS
T ss_pred CCcEEEEEecchhccCCC------------------------------------------------------------CC
Confidence 467999999976543211 01
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
+.+.|+.||+..|.+++.+ ..+++++++||+.|+++...... ........+..+ .....
T Consensus 155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~~---------~~~~~ 218 (254)
T 2wsb_A 155 FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-------ERPELFETWLDM---------TPMGR 218 (254)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-------TCHHHHHHHHHT---------STTSS
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-------cChHHHHHHHhc---------CCCCC
Confidence 2368999999999988765 34899999999999986532110 001111111111 11235
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+|++++.++....... . ++++++.++
T Consensus 219 ~~~~~dva~~~~~l~~~~~~~~-~-G~~~~v~gG 250 (254)
T 2wsb_A 219 CGEPSEIAAAALFLASPAASYV-T-GAILAVDGG 250 (254)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCcccccc-c-CCEEEECCC
Confidence 7899999999999886433222 2 789999886
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=171.19 Aligned_cols=226 Identities=15% Similarity=0.183 Sum_probs=152.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|++ +|+++.|+... ...+.+ .+..+ ..++.+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~--~v~~~~r~~~~-~~~~~l-------------~~~~~-------~~~~~~ 59 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENP-TALAEL-------------KAINP-------KVNITF 59 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCH-HHHHHH-------------HHHCT-------TSEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCc--EEEEEecCchH-HHHHHH-------------HHhCC-------CceEEE
Confidence 46899999999999999999999999973 35788886532 111221 11111 246889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcc--c----cee
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCA--K----LIV 156 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--~----~~~ 156 (492)
+.+|++++ .+..+.++ .++|+|||+||... .+.++..+++|+.|+.++++++.... . ..+
T Consensus 60 ~~~D~~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~ 132 (254)
T 1sby_A 60 HTYDVTVP------VAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGI 132 (254)
T ss_dssp EECCTTSC------HHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred EEEecCCC------hHHHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCE
Confidence 99999942 03233333 37999999999754 35678899999999999999886531 1 357
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|++||...+... .....
T Consensus 133 iv~isS~~~~~~~--------------------------------------------------------------~~~~~ 150 (254)
T 1sby_A 133 IANICSVTGFNAI--------------------------------------------------------------HQVPV 150 (254)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------------TTSHH
T ss_pred EEEECchhhccCC--------------------------------------------------------------CCchH
Confidence 9999997654321 12458
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
|+.||+..|.+.+.+ ..++++++++|+.|.++.......|.........+ .. ...+.++
T Consensus 151 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----~~------------~~~~~~~ 214 (254)
T 1sby_A 151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL----LL------------SHPTQTS 214 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH----HT------------TSCCEEH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHH----Hh------------cCCCCCH
Confidence 999999999988765 25899999999999887543322222110111111 00 1123489
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccH
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIY 348 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~ 348 (492)
+|+|++++.++.. ... +.+|++.++...+++|
T Consensus 215 ~dvA~~i~~~~~~--~~~---G~~~~v~gG~~~~~~~ 246 (254)
T 1sby_A 215 EQCGQNFVKAIEA--NKN---GAIWKLDLGTLEAIEW 246 (254)
T ss_dssp HHHHHHHHHHHHH--CCT---TCEEEEETTEEEECCC
T ss_pred HHHHHHHHHHHHc--CCC---CCEEEEeCCceeEecc
Confidence 9999999988863 222 7899998874334443
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.7e-19 Score=169.12 Aligned_cols=220 Identities=16% Similarity=0.153 Sum_probs=151.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.+|++|||||+|+||++++++|++.|. +|+++.|.... ..+.+.++ ++. ...++.+
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~~~ 58 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGY---NVAVNYAGSKE--KAEAVVEE---------IKA---------KGVDSFA 58 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHH---------HHH---------TTSCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 3579999999999999999999999996 44676664321 11111111 111 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 59 ~~~Dv~-------d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 131 (246)
T 3osu_A 59 IQANVA-------DADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ 131 (246)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 999999 5444445544 79999999997632 2557789999999999999988331 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 149 (246)
T 3osu_A 132 RSGAIINLSSVVGAVGN--------------------------------------------------------------P 149 (246)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------------T
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------------C
Confidence 45689999996544221 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|.++...... ......+..+ .....
T Consensus 150 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~---------~p~~r 211 (246)
T 3osu_A 150 GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS---------DELKEQMLTQ---------IPLAR 211 (246)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC---------HHHHHHHHTT---------CTTCS
T ss_pred CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC---------HHHHHHHHhc---------CCCCC
Confidence 3468999999888887654 45899999999999987653221 1222222211 12235
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++........ ++++++.+|
T Consensus 212 ~~~~~dva~~v~~l~s~~~~~it--G~~i~vdgG 243 (246)
T 3osu_A 212 FGQDTDIANTVAFLASDKAKYIT--GQTIHVNGG 243 (246)
T ss_dssp CBCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCccccCCC--CCEEEeCCC
Confidence 67889999999988874433222 889999887
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.1e-19 Score=169.37 Aligned_cols=221 Identities=15% Similarity=0.090 Sum_probs=151.4
Q ss_pred hcCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 9 FLENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 9 ~~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
.+++|+||||||+ |+||++++++|++.|+ +|+++.|+.. ..+.+. .+.++. .+
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~----------~l~~~~---------~~ 59 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA---EVALSYQAER---LRPEAE----------KLAEAL---------GG 59 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTC---EEEEEESCGG---GHHHHH----------HHHHHT---------TC
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCCHH---HHHHHH----------HHHHhc---------CC
Confidence 3678999999999 9999999999999996 5688888653 111211 111111 23
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHH
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a 148 (492)
+.++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++
T Consensus 60 ~~~~~~D~~-------~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 132 (261)
T 2wyu_A 60 ALLFRADVT-------QDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA 132 (261)
T ss_dssp CEEEECCTT-------CHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cEEEECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 688999999 4444444443 78999999997532 2457789999999999999999
Q ss_pred Hhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 149 KKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 149 ~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
.+.. +-.++|++||...+...
T Consensus 133 ~~~~~~~g~iv~isS~~~~~~~---------------------------------------------------------- 154 (261)
T 2wyu_A 133 EPLLREGGGIVTLTYYASEKVV---------------------------------------------------------- 154 (261)
T ss_dssp TTTEEEEEEEEEEECGGGTSBC----------------------------------------------------------
T ss_pred HHHhccCCEEEEEecccccCCC----------------------------------------------------------
Confidence 8742 12489999996543211
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..|.+.+.+ ..++++.+++|+.|.++.....+ ........+..+.
T Consensus 155 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~-------- 215 (261)
T 2wyu_A 155 ----PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-------GFTKMYDRVAQTA-------- 215 (261)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-------THHHHHHHHHHHS--------
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-------ccHHHHHHHHhcC--------
Confidence 12457999999999988755 34899999999999887542211 1111111111110
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+.+++|+|++++.++....... . ++++++.++
T Consensus 216 -p~~~~~~~~dva~~v~~l~s~~~~~~-t-G~~~~vdgG 251 (261)
T 2wyu_A 216 -PLRRNITQEEVGNLGLFLLSPLASGI-T-GEVVYVDAG 251 (261)
T ss_dssp -TTSSCCCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred -CCCCCCCHHHHHHHHHHHcChhhcCC-C-CCEEEECCC
Confidence 11246789999999999886433222 2 789999987
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-19 Score=166.56 Aligned_cols=214 Identities=12% Similarity=0.123 Sum_probs=145.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+....... .++ +..++.+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~---~~~---------------------~~~~~~~ 57 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGA---TVLGLDLKPPAGEEP---AAE---------------------LGAAVRF 57 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSCC------------------------------------CEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHHHHH---HHH---------------------hCCceEE
Confidence 5789999999999999999999999996 568888876542211 100 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 58 ~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 130 (257)
T 3tpc_A 58 RNADVT-------NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEV 130 (257)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999 4444445544 79999999997632 2567888999999999999988763
Q ss_pred c---------cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhh
Q 037479 152 A---------KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKD 222 (492)
Q Consensus 152 ~---------~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (492)
. +..++|++||...+...
T Consensus 131 m~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------------- 157 (257)
T 3tpc_A 131 MSQGEPDADGERGVIVNTASIAAFDGQ----------------------------------------------------- 157 (257)
T ss_dssp HTTSCCCTTSCCEEEEEECCTHHHHCC-----------------------------------------------------
T ss_pred HHhccccCCCCCeEEEEEechhhccCC-----------------------------------------------------
Confidence 1 23579999996554221
Q ss_pred hhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeE
Q 037479 223 LGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTC 297 (492)
Q Consensus 223 ~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~ 297 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++.....+. .....+
T Consensus 158 ---------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---------~~~~~~------- 212 (257)
T 3tpc_A 158 ---------IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ---------DVQDAL------- 212 (257)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------------------
T ss_pred ---------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH---------HHHHHH-------
Confidence 23468999999998887654 358999999999998865432111 000000
Q ss_pred EecCCCcc-cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 298 FLGDVKGI-VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 298 ~~~~~~~~-~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...... ..+..++|+|++++.++.. .... |+++++.++
T Consensus 213 --~~~~p~~~r~~~~~dva~~v~~l~s~-~~it---G~~i~vdGG 251 (257)
T 3tpc_A 213 --AASVPFPPRLGRAEEYAALVKHICEN-TMLN---GEVIRLDGA 251 (257)
T ss_dssp ---CCSSSSCSCBCHHHHHHHHHHHHHC-TTCC---SCEEEESTT
T ss_pred --HhcCCCCCCCCCHHHHHHHHHHHccc-CCcC---CcEEEECCC
Confidence 011111 3578899999999998863 2222 889999887
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=5.2e-19 Score=168.11 Aligned_cols=219 Identities=16% Similarity=0.111 Sum_probs=147.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||||+||++++++|++.|+ +|+++.|+... +.+.++ + .+ .+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~----~~~~~~---------------------~-~~-~~ 53 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGA---LVALCDLRPEG----KEVAEA---------------------I-GG-AF 53 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTH----HHHHHH---------------------H-TC-EE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChhH----HHHHHH---------------------h-hC-CE
Confidence 5689999999999999999999999996 56888887542 111110 0 13 77
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 54 ~~~D~~-------~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 126 (256)
T 2d1y_A 54 FQVDLE-------DERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV 126 (256)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred EEeeCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 899999 4444444433 78999999997543 1456789999999999999987542 2
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 127 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 144 (256)
T 2d1y_A 127 GGGAIVNVASVQGLFAE--------------------------------------------------------------Q 144 (256)
T ss_dssp TCEEEEEECCGGGTSBC--------------------------------------------------------------T
T ss_pred CCcEEEEEccccccCCC--------------------------------------------------------------C
Confidence 45799999996543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+.+.+ ..++++.+++|+.|.++.... +.... . ..+..............
T Consensus 145 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~------~---~~~~~~~~~~~~~~~~~ 212 (256)
T 2d1y_A 145 ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE---AIALS------P---DPERTRRDWEDLHALRR 212 (256)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHC-----------------CHHHHTTSTTSS
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh---ccccc------c---CCHHHHHHHHhcCCCCC
Confidence 2358999999999888755 358999999999887643210 00000 0 00000000011122346
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+|++++.++........ ++++++.++
T Consensus 213 ~~~~~dvA~~~~~l~s~~~~~~~--G~~~~v~gG 244 (256)
T 2d1y_A 213 LGKPEEVAEAVLFLASEKASFIT--GAILPVDGG 244 (256)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCCC--CCEEEECCC
Confidence 88999999999998874332222 789999988
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=172.67 Aligned_cols=227 Identities=13% Similarity=0.118 Sum_probs=153.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+.... .+.+. .+.++. ..++.+
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~--~~~~~----------~l~~~~--------~~~~~~ 68 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA---NVAVIYRSAADA--VEVTE----------KVGKEF--------GVKTKA 68 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCTTH--HHHHH----------HHHHHH--------TCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCcchhh--HHHHH----------HHHHhc--------CCeeEE
Confidence 6789999999999999999999999996 568888865432 11111 111111 256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++....
T Consensus 69 ~~~Dl~-------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 141 (265)
T 1h5q_A 69 YQCDVS-------NTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK 141 (265)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhc
Confidence 999999 4444434433 59999999997532 24567889999999999999886531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
...+||++||..++....+. .. ..
T Consensus 142 ~~~~~iv~~sS~~~~~~~~~~--~~-----------------------------------------------------~~ 166 (265)
T 1h5q_A 142 QQKGSIVVTSSMSSQIINQSS--LN-----------------------------------------------------GS 166 (265)
T ss_dssp TCCEEEEEECCGGGTSCCEEE--TT-----------------------------------------------------EE
T ss_pred CCCceEEEeCCchhhcccccc--cc-----------------------------------------------------cc
Confidence 24789999997654321100 00 00
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.+...|+.||+..|.+++.+ ..+++++++||+.|.++...... ......+.. .....
T Consensus 167 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~---------~~~~~ 228 (265)
T 1h5q_A 167 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD---------KKIRDHQAS---------NIPLN 228 (265)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---------HHHHHHHHH---------TCTTS
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc---------hhHHHHHHh---------cCccc
Confidence 23568999999999988765 34899999999999887543210 111111110 01112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|++++.++........ +++|++.++
T Consensus 229 ~~~~~~dva~~~~~l~~~~~~~~~--G~~~~v~gG 261 (265)
T 1h5q_A 229 RFAQPEEMTGQAILLLSDHATYMT--GGEYFIDGG 261 (265)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCC--SCEEEECTT
T ss_pred CCCCHHHHHHHHHhhccCchhcCc--CcEEEecCC
Confidence 478999999999998864332222 789999887
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=172.21 Aligned_cols=226 Identities=16% Similarity=0.132 Sum_probs=152.7
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ..++.. ..++.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~---------~~~~~ 66 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA---HVVVSSRKQEN---VDRTV---------ATLQGE---------GLSVT 66 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHT---------TCCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCceE
Confidence 36789999999999999999999999996 56888886421 11111 111111 24688
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC-- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (492)
.+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 67 ~~~~D~~-------~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 139 (260)
T 2zat_A 67 GTVCHVG-------KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEME 139 (260)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8999999 4444444443 79999999996431 2457788999999999998887532
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..++|++||...+...
T Consensus 140 ~~~~g~iv~isS~~~~~~~------------------------------------------------------------- 158 (260)
T 2zat_A 140 KRGGGSVLIVSSVGAYHPF------------------------------------------------------------- 158 (260)
T ss_dssp HTTCEEEEEECCGGGTSCC-------------------------------------------------------------
T ss_pred HcCCCEEEEEechhhcCCC-------------------------------------------------------------
Confidence 146799999997655321
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..|.+.+.+ ..++++++++|+.|.++.... .|.+ ......+..+ ...
T Consensus 159 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~-----~~~~~~~~~~---------~~~ 221 (260)
T 2zat_A 159 -PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV--LWMD-----KARKEYMKES---------LRI 221 (260)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH--HHSS-----HHHHHHHHHH---------HTC
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh--cccC-----hHHHHHHHhc---------CCC
Confidence 12458999999999988765 348999999999988764311 0100 0000000000 112
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCccc
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLI 347 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t 347 (492)
..+++++|+|++++.++........ ++++++.++ .++|
T Consensus 222 ~~~~~~~dva~~v~~l~s~~~~~~t--G~~~~vdgG--~~~s 259 (260)
T 2zat_A 222 RRLGNPEDCAGIVSFLCSEDASYIT--GETVVVGGG--TASR 259 (260)
T ss_dssp SSCBCGGGGHHHHHHHTSGGGTTCC--SCEEEESTT--CCCC
T ss_pred CCCCCHHHHHHHHHHHcCcccCCcc--CCEEEECCC--cccc
Confidence 3578999999999988864332222 789999998 5544
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-19 Score=169.62 Aligned_cols=217 Identities=20% Similarity=0.208 Sum_probs=127.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|+ +|+++.|+... .+.+.++ +... ..++.+
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 62 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA---AVVVADINAEA---AEAVAKQ---------IVAD---------GGTAIS 62 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 5789999999999999999999999996 56888885422 1221111 1111 257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccC----------cchhHHHHHHHhHHHHHHHHHHHHhc-
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTN----------FDERYDVALDLNTFGAKHVLNFSKKC- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~----------~~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (492)
+.+|++ +.+..+.+++ ++|+|||+||... ..+.++..+++|+.|+.++.+.+...
T Consensus 63 ~~~D~~-------~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 135 (253)
T 3qiv_A 63 VAVDVS-------DPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKM 135 (253)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 999999 4444445544 7999999999731 12457788999999977766655332
Q ss_pred --ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 152 --AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 152 --~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
.+..++|++||...+.
T Consensus 136 ~~~~~g~iv~isS~~~~~-------------------------------------------------------------- 153 (253)
T 3qiv_A 136 TKRGGGAIVNQSSTAAWL-------------------------------------------------------------- 153 (253)
T ss_dssp HHHTCEEEEEECC-------------------------------------------------------------------
T ss_pred HhcCCCEEEEECCccccC--------------------------------------------------------------
Confidence 1456899999976541
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
..+.|+.||+..|.+.+.+ ..++++.+++|+.|.++...... ...+...+..+ ..
T Consensus 154 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~---------~~ 213 (253)
T 3qiv_A 154 ---YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--------PKEMVDDIVKG---------LP 213 (253)
T ss_dssp ---------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------------
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--------cHHHHHHHhcc---------CC
Confidence 1246999999998887755 35899999999999887543211 01111111111 11
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+..++|+|++++.++........ +++|++.++
T Consensus 214 ~~~~~~~~dva~~~~~l~s~~~~~~t--G~~~~vdgG 248 (253)
T 3qiv_A 214 LSRMGTPDDLVGMCLFLLSDEASWIT--GQIFNVDGG 248 (253)
T ss_dssp ------CCHHHHHHHHHHSGGGTTCC--SCEEEC---
T ss_pred CCCCCCHHHHHHHHHHHcCccccCCC--CCEEEECCC
Confidence 22456789999999998874333222 889999987
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-18 Score=164.38 Aligned_cols=217 Identities=15% Similarity=0.145 Sum_probs=154.1
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-+++|+++||||+|+||++++++|++.|. +|+++.|+.... +....+ +..++.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~---~~~~~~---------------------~~~~~~ 60 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA---RVVLADLPETDL---AGAAAS---------------------VGRGAV 60 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSCH---HHHHHH---------------------HCTTCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEcCCHHHH---HHHHHH---------------------hCCCeE
Confidence 46799999999999999999999999996 568888875432 111111 125678
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHH----
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF---------DERYDVALDLNTFGAKHVLNFS---- 148 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a---- 148 (492)
++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 61 ~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 133 (271)
T 3tzq_B 61 HHVVDLT-------NEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRL 133 (271)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 8999999 4444445554 79999999997622 2456789999999999999988
Q ss_pred HhcccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 149 KKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 149 ~~~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
++. +..++|++||...+...
T Consensus 134 ~~~-~~g~iv~isS~~~~~~~----------------------------------------------------------- 153 (271)
T 3tzq_B 134 ISA-GGGAIVNISSATAHAAY----------------------------------------------------------- 153 (271)
T ss_dssp HHT-TCEEEEEECCGGGTSBC-----------------------------------------------------------
T ss_pred Hhc-CCCEEEEECCHHHcCCC-----------------------------------------------------------
Confidence 333 45789999996554221
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++.... .+ .......+.. ..
T Consensus 154 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~------~~~~~~~~~~---------~~ 213 (271)
T 3tzq_B 154 ---DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV--GL------PQPIVDIFAT---------HH 213 (271)
T ss_dssp ---SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----------CHHHHHHHHT---------TS
T ss_pred ---CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc--cC------CHHHHHHHHh---------cC
Confidence 23468999999999988765 358999999999999876531 00 1111211111 11
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+..++|+|++++.++........ |+++++.+|
T Consensus 214 ~~~r~~~p~dvA~~v~~L~s~~~~~it--G~~i~vdGG 249 (271)
T 3tzq_B 214 LAGRIGEPHEIAELVCFLASDRAAFIT--GQVIAADSG 249 (271)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCCcCHHHHHHHHHHHhCcccCCcC--CCEEEECCC
Confidence 122467899999999998875433222 889999887
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.9e-19 Score=169.08 Aligned_cols=215 Identities=12% Similarity=0.126 Sum_probs=148.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+.... +.+.++ +..++.+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~---~~~~~~---------------------~~~~~~~ 62 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA---SAVLLDLPNSGG---EAQAKK---------------------LGNNCVF 62 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSSH---HHHHHH---------------------HCTTEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcHhH---HHHHHH---------------------hCCceEE
Confidence 5789999999999999999999999996 568888875432 111111 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 63 ~~~D~~-------~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~ 135 (265)
T 2o23_A 63 APADVT-------SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVA 135 (265)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999 4444545554 79999999997532 24567889999999999999887
Q ss_pred hcc---------cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Q 037479 150 KCA---------KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAM 220 (492)
Q Consensus 150 ~~~---------~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (492)
... +..++|++||...+...
T Consensus 136 ~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------- 164 (265)
T 2o23_A 136 GEMGQNEPDQGGQRGVIINTASVAAFEGQ--------------------------------------------------- 164 (265)
T ss_dssp HHHTTSCCCTTSCCEEEEEECCTHHHHCC---------------------------------------------------
T ss_pred HHHHhcccccCCCCcEEEEeCChhhcCCC---------------------------------------------------
Confidence 641 34689999997655321
Q ss_pred hhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee
Q 037479 221 KDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL 295 (492)
Q Consensus 221 ~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~ 295 (492)
.....|+.||+..+.+.+.+ ..++++++++|+.|.++.....+. ... ..+.. .
T Consensus 165 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~---~~~~~----~- 222 (265)
T 2o23_A 165 -----------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE---KVC---NFLAS----Q- 222 (265)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------------CHHHH----T-
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH---HHH---HHHHH----c-
Confidence 13468999999888887654 358999999999998765422110 000 00000 0
Q ss_pred eEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 296 TCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 296 ~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+. ...++.++|+|++++.++.. .... ++++++.++
T Consensus 223 --~~~----~~~~~~~~dva~~~~~l~~~-~~~~---G~~i~vdgG 258 (265)
T 2o23_A 223 --VPF----PSRLGDPAEYAHLVQAIIEN-PFLN---GEVIRLDGA 258 (265)
T ss_dssp --CSS----SCSCBCHHHHHHHHHHHHHC-TTCC---SCEEEESTT
T ss_pred --CCC----cCCCCCHHHHHHHHHHHhhc-CccC---ceEEEECCC
Confidence 000 02467899999999998853 2222 789999887
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=170.60 Aligned_cols=226 Identities=15% Similarity=0.122 Sum_probs=149.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||||+||++++++|++.|+ +|+++.|+.. . ...+++ .. ...++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~-~----~~~~~l---------~~---------~~~~~~~ 55 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGA---NIVLNGFGDP-A----PALAEI---------AR---------HGVKAVH 55 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEECSSCC-H----HHHHHH---------HT---------TSCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCch-H----HHHHHH---------Hh---------cCCceEE
Confidence 4689999999999999999999999996 5688888654 1 111111 10 0246888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+ ++.
T Consensus 56 ~~~D~~-------~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 128 (255)
T 2q2v_A 56 HPADLS-------DVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR 128 (255)
T ss_dssp ECCCTT-------SHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EeCCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 999999 5555555555 79999999997532 2457789999999888777765 333
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||...+...
T Consensus 129 -~~g~iv~isS~~~~~~~-------------------------------------------------------------- 145 (255)
T 2q2v_A 129 -NWGRIINIASVHGLVGS-------------------------------------------------------------- 145 (255)
T ss_dssp -TCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred -CCcEEEEEcCchhccCC--------------------------------------------------------------
Confidence 46799999997654321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcC-chHHHHHhccCceeeEEecCCCcc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIR-TIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..+.+.+.+ ..+++++++||+.|.++.......-..... ........+ .......
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~p~ 217 (255)
T 2q2v_A 146 TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDL--------LAEKQPS 217 (255)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHH--------HTTTCTT
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHH--------HhccCCC
Confidence 12357999999999888755 358999999999998764311000000000 000000111 0111223
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+++++|+|++++.++........ +++|++.++
T Consensus 218 ~~~~~~~dvA~~~~~l~s~~~~~~t--G~~~~vdgG 251 (255)
T 2q2v_A 218 LAFVTPEHLGELVLFLCSEAGSQVR--GAAWNVDGG 251 (255)
T ss_dssp CCCBCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCCccCCCC--CCEEEECCC
Confidence 4689999999999988864332222 789999887
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-18 Score=165.78 Aligned_cols=235 Identities=13% Similarity=0.137 Sum_probs=155.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC------HHHHHHHHhhcChhhHHHHHhcCCchhhhc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS------ATVRFHNEIIGKDLFRVLKEKNGTHLNALI 83 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~------~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+..... ..+++.. . ...+.. .
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~-~-----~~~~~~---------~ 69 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGA---DIAICDRCENSDVVGYPLATADDLAE-T-----VALVEK---------T 69 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCSSCCCCHHHHHH-H-----HHHHHH---------T
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCccccccccccccHHHHHH-H-----HHHHHh---------c
Confidence 5789999999999999999999999996 5688888743211 1122210 0 011111 1
Q ss_pred cCceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 84 SEKITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 84 ~~~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
..++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 70 ~~~~~~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 142 (281)
T 3s55_A 70 GRRCISAKVDVK-------DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVA 142 (281)
T ss_dssp TCCEEEEECCTT-------CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCeEEEEeCCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 257899999999 4444445443 79999999997542 25678899999999999999874
Q ss_pred hc---ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 150 KC---AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 150 ~~---~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
.. .+..++|++||...+...
T Consensus 143 ~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------- 165 (281)
T 3s55_A 143 PGMIKRNYGRIVTVSSMLGHSAN--------------------------------------------------------- 165 (281)
T ss_dssp HHHHHHTCEEEEEECCGGGGSCC---------------------------------------------------------
T ss_pred HHHHHcCCCEEEEECChhhcCCC---------------------------------------------------------
Confidence 42 144689999996544221
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCC---ccccCc--CchHHHHHhccCceee
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFP---GWAEGI--RTIDSLAVGYGKGRLT 296 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~---gw~~~~--~~~~~~~~~~~~g~~~ 296 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++...... .+.... ....... ..
T Consensus 166 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~------ 233 (281)
T 3s55_A 166 -----FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVE-SV------ 233 (281)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHH-HH------
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHH-HH------
Confidence 23468999999999888765 35899999999999987653200 000000 0000000 00
Q ss_pred EEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 297 CFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 297 ~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+.........++.++|+|++++.++........ |+++++.+|
T Consensus 234 -~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~it--G~~i~vdgG 275 (281)
T 3s55_A 234 -FASLHLQYAPFLKPEEVTRAVLFLVDEASSHIT--GTVLPIDAG 275 (281)
T ss_dssp -HHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred -HHhhhccCcCCCCHHHHHHHHHHHcCCcccCCC--CCEEEECCC
Confidence 000111225788999999999998875433222 889999988
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=168.62 Aligned_cols=220 Identities=15% Similarity=0.080 Sum_probs=149.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.+++. +. ...++.++.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~~~~---------~~--------~~~~~~~~~ 58 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD---RVAALDLSAET---LEETARTHW---------HA--------YADKVLRVR 58 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHHS---------TT--------TGGGEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHHH---------Hh--------cCCcEEEEE
Confidence 68999999999999999999999996 56888886421 111111110 00 125688999
Q ss_pred cCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 92 GDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF----------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 59 ~D~~-------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (250)
T 2cfc_A 59 ADVA-------DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLL 131 (250)
T ss_dssp CCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ecCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999 4444445544 79999999996532 1456788999999998877766432
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||...+...
T Consensus 132 ~~~~~iv~isS~~~~~~~-------------------------------------------------------------- 149 (250)
T 2cfc_A 132 QGAGVIVNIASVASLVAF-------------------------------------------------------------- 149 (250)
T ss_dssp HTCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred CCCCEEEEECChhhccCC--------------------------------------------------------------
Confidence 146799999997654321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+++.+ ..+++++++||+.|+++..... .. ...+...+..+ ....
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~----~~~~~~~~~~~---------~~~~ 213 (250)
T 2cfc_A 150 PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR---LD----QPELRDQVLAR---------IPQK 213 (250)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH---HT----SHHHHHHHHTT---------CTTC
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc---cC----CHHHHHHHHhc---------CCCC
Confidence 13468999999999988765 3489999999999998764210 00 01111111111 1123
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|++++.++....... . ++++++.++
T Consensus 214 ~~~~~~dva~~~~~l~~~~~~~~-~-G~~~~v~gG 246 (250)
T 2cfc_A 214 EIGTAAQVADAVMFLAGEDATYV-N-GAALVMDGA 246 (250)
T ss_dssp SCBCHHHHHHHHHHHHSTTCTTC-C-SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcCchhhcc-c-CCEEEECCc
Confidence 57899999999999886432222 2 789999876
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=170.58 Aligned_cols=222 Identities=16% Similarity=0.102 Sum_probs=149.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+.. ...+.+.+ .++. ...++.+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~---------~l~~---------~~~~~~~ 61 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKA---KVVVNYRSKE--DEANSVLE---------EIKK---------VGGEAIA 61 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHH---------HHHH---------TTCEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEcCCCh--HHHHHHHH---------HHHh---------cCCceEE
Confidence 5789999999999999999999999996 5688888321 11111111 1111 0256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+..
T Consensus 62 ~~~D~~-------~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (261)
T 1gee_A 62 VKGDVT-------VESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134 (261)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence 999999 4444445444 79999999997543 24567889999999999988776531
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ ..+||++||...+...
T Consensus 135 ~~~~~iv~isS~~~~~~~-------------------------------------------------------------- 152 (261)
T 1gee_A 135 DIKGTVINMSSVHEKIPW-------------------------------------------------------------- 152 (261)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred CCCCEEEEeCCHHhcCCC--------------------------------------------------------------
Confidence 2 4689999996433211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.+ ..+++++++||+.|.++..... . ........+.. .....
T Consensus 153 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~----~~~~~~~~~~~---------~~~~~ 216 (261)
T 1gee_A 153 PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK---F----ADPEQRADVES---------MIPMG 216 (261)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH---H----HSHHHHHHHHT---------TCTTS
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhc---c----cChhHHHHHHh---------cCCCC
Confidence 23468999998888877654 3489999999999988754210 0 00111111111 01123
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|++++.++........ ++++++.++
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~--G~~~~v~gg 249 (261)
T 1gee_A 217 YIGEPEEIAAVAAWLASSEASYVT--GITLFADGG 249 (261)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCccccCCC--CcEEEEcCC
Confidence 578999999999998864322222 789999887
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-19 Score=169.74 Aligned_cols=217 Identities=14% Similarity=0.135 Sum_probs=146.6
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++|+||||||+|+||++++++|++.|+ +|+++.|+... .+.+. ++ +..++.
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~ 63 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS---KVIISGSNEEK---LKSLG-------------NA--------LKDNYT 63 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH--------HCSSEE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH-------------HH--------hccCcc
Confidence 46789999999999999999999999996 56888885321 11111 11 135788
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---ccce
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN---KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AKLI 155 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~ 155 (492)
++.+|++ +.+....+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+..
T Consensus 64 ~~~~D~~-------~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g 136 (249)
T 3f9i_A 64 IEVCNLA-------NKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYG 136 (249)
T ss_dssp EEECCTT-------SHHHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred EEEcCCC-------CHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8999999 4444545554 79999999997542 2467889999999999998887542 1446
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
+||++||...+... ....
T Consensus 137 ~iv~isS~~~~~~~--------------------------------------------------------------~~~~ 154 (249)
T 3f9i_A 137 RIINISSIVGIAGN--------------------------------------------------------------PGQA 154 (249)
T ss_dssp EEEEECCCCC--CC--------------------------------------------------------------SCSH
T ss_pred EEEEEccHHhccCC--------------------------------------------------------------CCCc
Confidence 89999997655321 1346
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
.|+.||+..|.+.+.+ ..++++.+++|+.|.++...... ......+.. ......+.+
T Consensus 155 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~---------~~~~~~~~~ 216 (249)
T 3f9i_A 155 NYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN---------EKQREAIVQ---------KIPLGTYGI 216 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC---------HHHHHHHHH---------HCTTCSCBC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC---------HHHHHHHHh---------cCCCCCCcC
Confidence 8999999888887654 35899999999999876543211 111111111 112336788
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++|+|++++.++........ |+++++.++
T Consensus 217 ~~dva~~~~~l~s~~~~~~t--G~~~~vdgG 245 (249)
T 3f9i_A 217 PEDVAYAVAFLASNNASYIT--GQTLHVNGG 245 (249)
T ss_dssp HHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred HHHHHHHHHHHcCCccCCcc--CcEEEECCC
Confidence 99999999998875433222 889999887
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=169.67 Aligned_cols=218 Identities=16% Similarity=0.164 Sum_probs=146.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE-EecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLL-LRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l-vR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
||+|+||||||+||++++++|++.|+ +|+++ .|+... .+.+.+ .++. ...++.++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~---~v~~~~~r~~~~---~~~~~~---------~~~~---------~~~~~~~~ 56 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGC---KVLVNYARSAKA---AEEVSK---------QIEA---------YGGQAITF 56 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHH---HHHHHH---------HHHH---------HTCEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHHH---HHHHHH---------HHHh---------cCCcEEEE
Confidence 58999999999999999999999996 44664 564321 111111 1111 12568899
Q ss_pred ecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 91 PGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .+
T Consensus 57 ~~D~~-------~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 129 (244)
T 1edo_A 57 GGDVS-------KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR 129 (244)
T ss_dssp ECCTT-------SHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred eCCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence 99999 4444445544 79999999997642 1456788999999999999988663 24
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..+||++||...+... ..
T Consensus 130 ~~~iv~~sS~~~~~~~--------------------------------------------------------------~~ 147 (244)
T 1edo_A 130 KGRIINIASVVGLIGN--------------------------------------------------------------IG 147 (244)
T ss_dssp CEEEEEECCTHHHHCC--------------------------------------------------------------TT
T ss_pred CCEEEEECChhhcCCC--------------------------------------------------------------CC
Confidence 6799999996543211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..|.+.+.+ ..+++++++||+.|.++...... ......+... .....+
T Consensus 148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~---------~~~~~~ 209 (244)
T 1edo_A 148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG---------EDMEKKILGT---------IPLGRT 209 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---------HHHHHHHHTS---------CTTCSC
T ss_pred CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC---------hHHHHHHhhc---------CCCCCC
Confidence 457999999888877654 35899999999999876432111 1111111110 112357
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++++|+|++++.++..+....-. +++|++.++
T Consensus 210 ~~~~dva~~~~~l~~~~~~~~~~-G~~~~v~gG 241 (244)
T 1edo_A 210 GQPENVAGLVEFLALSPAASYIT-GQAFTIDGG 241 (244)
T ss_dssp BCHHHHHHHHHHHHHCSGGGGCC-SCEEEESTT
T ss_pred CCHHHHHHHHHHHhCCCccCCcC-CCEEEeCCC
Confidence 89999999999888432211111 789999887
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=167.78 Aligned_cols=233 Identities=13% Similarity=0.109 Sum_probs=149.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... ..+.+.++ +... ...++.+
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~---~V~~~~r~~~~--~~~~~~~~---------~~~~--------~~~~~~~ 80 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGA---NIVLNGFGAPD--EIRTVTDE---------VAGL--------SSGTVLH 80 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEECCCCHH--HHHHHHHH---------HHTT--------CSSCEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCChH--HHHHHHHH---------Hhhc--------cCCcEEE
Confidence 5679999999999999999999999996 55777774321 11111111 1111 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 81 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 153 (281)
T 3v2h_A 81 HPADMT-------KPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK 153 (281)
T ss_dssp ECCCTT-------CHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EeCCCC-------CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 999999 4444444443 79999999997532 2457788999999999999987432 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 154 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 171 (281)
T 3v2h_A 154 GWGRIINIASAHGLVAS--------------------------------------------------------------P 171 (281)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCCEEEEECCcccccCC--------------------------------------------------------------C
Confidence 44689999996544211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|.++....... ......... ..........+......
T Consensus 172 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~p~~r 245 (281)
T 3v2h_A 172 FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIP---DQARTRGIT---EEQVINEVMLKGQPTKK 245 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------------CCTTCS
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcc---hhhhhcCCC---HHHHHHHHHHhcCCCCC
Confidence 3468999999999888755 358999999999998875432110 000000000 00000111233344567
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++.++|+|++++.++........ |+++++.+|
T Consensus 246 ~~~~edvA~~v~~L~s~~a~~it--G~~i~vdGG 277 (281)
T 3v2h_A 246 FITVEQVASLALYLAGDDAAQIT--GTHVSMDGG 277 (281)
T ss_dssp CBCHHHHHHHHHHHHSSGGGGCC--SCEEEESTT
T ss_pred ccCHHHHHHHHHHHcCCCcCCCC--CcEEEECCC
Confidence 99999999999998864332222 889999887
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-19 Score=170.00 Aligned_cols=224 Identities=18% Similarity=0.156 Sum_probs=151.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|+ +|+++.|+... .+.+. ..++.. ..++.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~---------~~~~~~ 62 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA---SVYTCSRNQKE---LNDCL---------TQWRSK---------GFKVEA 62 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHT---------TCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCcEEE
Confidence 5789999999999999999999999996 56888886421 11111 111111 246889
Q ss_pred EecCCCCCCCCCCchhhHHHhc--------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW--------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~--------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~D~~-------~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 135 (260)
T 2ae2_A 63 SVCDLS-------SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA 135 (260)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999999 444444444 579999999997532 2457788999999999999988532
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||...+...
T Consensus 136 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 153 (260)
T 2ae2_A 136 SERGNVVFISSVSGALAV-------------------------------------------------------------- 153 (260)
T ss_dssp TSSEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred cCCcEEEEEcchhhccCC--------------------------------------------------------------
Confidence 145799999996544211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.+ ..++++++++|+.|.++.... +... ......+..+.. .....
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~-~~~~~~~~~~~~---------~~~~~ 220 (260)
T 2ae2_A 154 PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM---TIQD-PEQKENLNKLID---------RCALR 220 (260)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH---HTTS-HHHHHHHHHHHH---------TSTTC
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh---hccC-hhhHHHHHHHHh---------cCCCC
Confidence 13468999999999998765 348999999999987653211 0000 000010001111 11123
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|++++.++........ ++++++.++
T Consensus 221 ~~~~~~dvA~~v~~l~s~~~~~~t--G~~~~vdgG 253 (260)
T 2ae2_A 221 RMGEPKELAAMVAFLCFPAASYVT--GQIIYVDGG 253 (260)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCHHHHHHHHHHHcCccccCCC--CCEEEECCC
Confidence 578999999999988864332222 789999887
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-18 Score=163.70 Aligned_cols=219 Identities=13% Similarity=0.104 Sum_probs=141.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||||+||++++++|++.|+ +|+++.|+.... ..++..
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~~-------------------------------~~~~~~ 50 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGA---KVTGFDQAFTQE-------------------------------QYPFAT 50 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCCCSS-------------------------------CCSSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCchhhh-------------------------------cCCceE
Confidence 5689999999999999999999999996 568888865311 012678
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 51 ~~~D~~-------d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 123 (250)
T 2fwm_X 51 EVMDVA-------DAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ 123 (250)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc
Confidence 899999 4444445544 79999999997542 2467889999999999999988321 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 141 (250)
T 2fwm_X 124 RGGAIVTVASDAAHTPR--------------------------------------------------------------I 141 (250)
T ss_dssp TCCEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCCEEEEECchhhCCCC--------------------------------------------------------------C
Confidence 45789999997654211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+.+.+ ..+++++++||+.|.++....... .. ......+...... . ........
T Consensus 142 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~-~~~~~~~~~~~~~-~----~~~~p~~~ 213 (250)
T 2fwm_X 142 GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV--SD-DAEEQRIRGFGEQ-F----KLGIPLGK 213 (250)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc--Ch-hHHHHHHhhhhhc-c----cccCCCCC
Confidence 3468999999999988765 358999999999998875422100 00 0000000000000 0 00011124
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++........ ++++++.++
T Consensus 214 ~~~p~dvA~~v~~l~s~~~~~~t--G~~i~vdGG 245 (250)
T 2fwm_X 214 IARPQEIANTILFLASDLASHIT--LQDIVVDGG 245 (250)
T ss_dssp --CHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCccccCCC--CCEEEECCC
Confidence 67899999999998875332222 789999887
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=165.85 Aligned_cols=220 Identities=14% Similarity=0.132 Sum_probs=152.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.++ ++. ...++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~ 65 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA---SVVVTDLKSEG---AEAVAAA---------IRQ---------AGGKAIG 65 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC---EEEEEESSHHH---HHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHh---------cCCcEEE
Confidence 6789999999999999999999999996 55888885422 1222111 111 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 66 ~~~Dv~-------d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 138 (256)
T 3gaf_A 66 LECNVT-------DEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG 138 (256)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred EECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 999999 4444444443 79999999997543 2567888999999999999987542 13
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||...+... ..
T Consensus 139 ~g~iv~isS~~~~~~~--------------------------------------------------------------~~ 156 (256)
T 3gaf_A 139 GGAILNISSMAGENTN--------------------------------------------------------------VR 156 (256)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------------TT
T ss_pred CcEEEEEcCHHHcCCC--------------------------------------------------------------CC
Confidence 4689999996544221 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+.+.+ ..++++..++|+.|.++..... . .......+. .......+
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-------~-~~~~~~~~~---------~~~p~~r~ 219 (256)
T 3gaf_A 157 MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV-------L-TPEIERAML---------KHTPLGRL 219 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH-------C-CHHHHHHHH---------TTCTTSSC
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc-------c-CHHHHHHHH---------hcCCCCCC
Confidence 468999999999988755 3589999999999887542110 0 011111111 11223357
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..++|+|++++.++........ |+++++.+|
T Consensus 220 ~~~~dva~~~~~L~s~~~~~it--G~~i~vdgG 250 (256)
T 3gaf_A 220 GEAQDIANAALFLCSPAAAWIS--GQVLTVSGG 250 (256)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCHHHHHHHHHHHcCCcccCcc--CCEEEECCC
Confidence 8899999999998874333222 899999998
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.7e-19 Score=167.78 Aligned_cols=231 Identities=13% Similarity=0.097 Sum_probs=148.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+.+ .+....+ ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~~~-------~~~~~~ 62 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA---RLLLFSRNREK---LEAAAS---------RIASLVS-------GAQVDI 62 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHHST-------TCCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH---------HHHhcCC-------CCeEEE
Confidence 5789999999999999999999999996 56888886421 111111 1111100 126889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 63 ~~~D~~-------~~~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 135 (260)
T 2z1n_A 63 VAGDIR-------EPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG 135 (260)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred EEccCC-------CHHHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 999999 4544545554 49999999996532 2457889999999998777766432 14
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||...+... ..
T Consensus 136 ~g~iv~isS~~~~~~~--------------------------------------------------------------~~ 153 (260)
T 2z1n_A 136 WGRMVYIGSVTLLRPW--------------------------------------------------------------QD 153 (260)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------------TT
T ss_pred CcEEEEECchhhcCCC--------------------------------------------------------------CC
Confidence 5799999997655321 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCC-ccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFP-GWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~-gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
...|+.||+..+.+.+.+ ..+++++++||+.|.++...... ..... .....-. . ...+ ........
T Consensus 154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~---~---~~~~-~~~~p~~r 225 (260)
T 2z1n_A 154 LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARR-SGITVEE---A---LKSM-ASRIPMGR 225 (260)
T ss_dssp BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-------------------------------CCTTSS
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcc-cCCcHHH---H---HHHH-HhcCCCCC
Confidence 358999999998887654 34899999999999987643100 00000 0000000 0 0000 01111224
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++........ ++++++.++
T Consensus 226 ~~~~~dva~~v~~l~s~~~~~~t--G~~i~vdGG 257 (260)
T 2z1n_A 226 VGKPEELASVVAFLASEKASFIT--GAVIPVDGG 257 (260)
T ss_dssp CCCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred ccCHHHHHHHHHHHhCccccCCC--CCEEEeCCC
Confidence 77899999999998864332222 789998876
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.9e-19 Score=166.79 Aligned_cols=219 Identities=15% Similarity=0.146 Sum_probs=152.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|. +|+++.|+... .+.+.++ +++. ..++.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 58 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA---TVVGTATSQAS---AEKFENS---------MKEK---------GFKARG 58 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCceEE
Confidence 4689999999999999999999999996 56888886432 1121111 1111 257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 59 ~~~D~~-------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 131 (247)
T 3lyl_A 59 LVLNIS-------DIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK 131 (247)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 999999 4444444443 58999999997632 2457788999999999999887552 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 149 (247)
T 3lyl_A 132 RWGRIISIGSVVGSAGN--------------------------------------------------------------P 149 (247)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------------T
T ss_pred CCeEEEEEcchhhccCC--------------------------------------------------------------C
Confidence 34589999996544221 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|.++....... .....+ ........
T Consensus 150 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~---------~~~~~~~~ 211 (247)
T 3lyl_A 150 GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD---------EQKSFI---------ATKIPSGQ 211 (247)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH---------HHHHHH---------HTTSTTCC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH---------HHHHHH---------hhcCCCCC
Confidence 3468999999877777654 458999999999998765533211 111111 11223346
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+.+++|+|++++.++........ |+++++.+|
T Consensus 212 ~~~~~dva~~i~~l~s~~~~~~t--G~~i~vdgG 243 (247)
T 3lyl_A 212 IGEPKDIAAAVAFLASEEAKYIT--GQTLHVNGG 243 (247)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCCCcCCcc--CCEEEECCC
Confidence 78999999999998864433222 889999887
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-18 Score=164.68 Aligned_cols=224 Identities=14% Similarity=0.099 Sum_probs=148.7
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe-cCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR-AADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR-~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
-|++|++|||||+|+||++++++|++.|+ +|+++.| +.. ..+.+. ..+.... ..++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~~~--------~~~~ 64 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGF---RVVVHYRHSEG---AAQRLV---------AELNAAR--------AGSA 64 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH---HHHHHH---------HHHHHHS--------TTCE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCChH---HHHHHH---------HHHHHhc--------CCce
Confidence 36789999999999999999999999996 5688888 421 111111 1111110 2568
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCcc------------------hhHHHHHHHhHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNFD------------------ERYDVALDLNTFGAK 142 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~~------------------~~~~~~~~~Nv~gt~ 142 (492)
.++.+|++++.. ..+..+.+++ ++|++||+||..... +.++..+++|+.|+.
T Consensus 65 ~~~~~Dl~~~~~---~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 141 (276)
T 1mxh_A 65 VLCKGDLSLSSS---LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL 141 (276)
T ss_dssp EEEECCCSSSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHH
T ss_pred EEEeccCCCccc---cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHH
Confidence 899999995310 0033334443 799999999975321 556788999999999
Q ss_pred HHHHHHHhcc--cc------eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHH
Q 037479 143 HVLNFSKKCA--KL------IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEE 214 (492)
Q Consensus 143 ~ll~~a~~~~--~~------~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (492)
++++++.... +. .++|++||...+...
T Consensus 142 ~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------- 176 (276)
T 1mxh_A 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL--------------------------------------------- 176 (276)
T ss_dssp HHHHHHHHTC-------CCCEEEEEECCGGGGSCC---------------------------------------------
T ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCC---------------------------------------------
Confidence 9999988742 33 689999997654321
Q ss_pred HHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHh
Q 037479 215 AITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVG 289 (492)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~ 289 (492)
.....|+.||+..+.+.+.+ ..++++++++|+.|.++ . ..+ ......
T Consensus 177 -----------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~---------~~~~~~ 228 (276)
T 1mxh_A 177 -----------------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMP---------QETQEE 228 (276)
T ss_dssp -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSC---------HHHHHH
T ss_pred -----------------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCC---------HHHHHH
Confidence 12458999999999888755 34899999999999987 2 111 111111
Q ss_pred ccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 290 YGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 290 ~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+.... + ..+++++++|+|++++.++....... . ++++++.++
T Consensus 229 ~~~~~----p----~~r~~~~~~dva~~v~~l~s~~~~~~-t-G~~~~vdgG 270 (276)
T 1mxh_A 229 YRRKV----P----LGQSEASAAQIADAIAFLVSKDAGYI-T-GTTLKVDGG 270 (276)
T ss_dssp HHTTC----T----TTSCCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred HHhcC----C----CCCCCCCHHHHHHHHHHHhCccccCc-c-CcEEEECCc
Confidence 11110 0 11237889999999999886433222 2 789999887
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=7.1e-19 Score=167.80 Aligned_cols=228 Identities=14% Similarity=0.046 Sum_probs=155.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|+ +|+++.|+... .+.+.++ +++. ...++.+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~--------~~~~~~~ 64 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA---NVAVAGRSTAD---IDACVAD---------LDQL--------GSGKVIG 64 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHTT--------SSSCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhh--------CCCcEEE
Confidence 5789999999999999999999999996 56888886432 1111111 1111 1157899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 65 ~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 137 (262)
T 3pk0_A 65 VQTDVS-------DRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS 137 (262)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999 4444445443 79999999997532 2557888999999999999987654 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... . .
T Consensus 138 ~~g~iv~isS~~~~~~~--------~-----------------------------------------------------~ 156 (262)
T 3pk0_A 138 GSGRVVLTSSITGPITG--------Y-----------------------------------------------------P 156 (262)
T ss_dssp SSCEEEEECCSBTTTBC--------C-----------------------------------------------------T
T ss_pred CCcEEEEEechhhccCC--------C-----------------------------------------------------C
Confidence 45689999996532110 0 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|.++..... .......+... .....
T Consensus 157 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~---------~p~~r 218 (262)
T 3pk0_A 157 GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---------GEEYIASMARS---------IPAGA 218 (262)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---------CHHHHHHHHTT---------STTSS
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---------CHHHHHHHHhc---------CCCCC
Confidence 3468999999999988765 3589999999999988643211 01112111111 11224
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccH
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIY 348 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~ 348 (492)
+..++|+|++++.++........ |+++++.+|...+-++
T Consensus 219 ~~~p~dva~~v~~L~s~~~~~it--G~~i~vdGG~~~~~~~ 257 (262)
T 3pk0_A 219 LGTPEDIGHLAAFLATKEAGYIT--GQAIAVDGGQVLPESL 257 (262)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTTTTCCSSG
T ss_pred CcCHHHHHHHHHHHhCccccCCc--CCEEEECCCeecCcch
Confidence 67899999999998874433222 8899999884433343
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=165.39 Aligned_cols=220 Identities=14% Similarity=0.088 Sum_probs=150.1
Q ss_pred cCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+|+||||+ |+||++++++|++.|+ +|+++.|+... .+.+. .+.++. ...
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~----------~l~~~~---------~~~ 61 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQNDKL---KGRVE----------EFAAQL---------GSD 61 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSTTT---HHHHH----------HHHHHT---------TCC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEcCcHHH---HHHHH----------HHHHhc---------CCc
Confidence 678999999999 9999999999999996 56888887621 11211 111111 234
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc------------chhHHHHHHHhHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF------------DERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a 148 (492)
.++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++
T Consensus 62 ~~~~~D~~-------~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 134 (265)
T 1qsg_A 62 IVLQCDVA-------EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKAC 134 (265)
T ss_dssp CEEECCTT-------CHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred EEEEccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 67899999 4444444443 68999999997531 1456788999999999999999
Q ss_pred Hhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 149 KKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 149 ~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
.... .-.++|++||...+...
T Consensus 135 ~~~~~~~g~iv~isS~~~~~~~---------------------------------------------------------- 156 (265)
T 1qsg_A 135 RSMLNPGSALLTLSYLGAERAI---------------------------------------------------------- 156 (265)
T ss_dssp GGGEEEEEEEEEEECGGGTSBC----------------------------------------------------------
T ss_pred HHHhccCCEEEEEcchhhccCC----------------------------------------------------------
Confidence 8742 12489999996543211
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..|.+.+.+ ..++++.+++|+.|.++.....+ ........+..+.
T Consensus 157 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~-------- 217 (265)
T 1qsg_A 157 ----PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-------DFRKMLAHCEAVT-------- 217 (265)
T ss_dssp ----TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHS--------
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-------ccHHHHHHHHhcC--------
Confidence 12457999999999988755 34899999999999887542211 1111111111110
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+.+++|+|++++.++....... . ++++++.++
T Consensus 218 -p~~~~~~~~dva~~v~~l~s~~~~~~-t-G~~~~vdgG 253 (265)
T 1qsg_A 218 -PIRRTVTIEDVGNSAAFLCSDLSAGI-S-GEVVHVDGG 253 (265)
T ss_dssp -TTSSCCCHHHHHHHHHHHTSGGGTTC-C-SCEEEESTT
T ss_pred -CCCCCCCHHHHHHHHHHHhCchhcCc-c-CCEEEECCC
Confidence 11246789999999998886433222 2 789999987
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.80 E-value=7.4e-19 Score=166.40 Aligned_cols=219 Identities=14% Similarity=0.156 Sum_probs=149.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+. ++... ..++.+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~~~------~~~~~~ 58 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGA---KVMITGRHSDV---GEKAA-------------KSVGT------PDQIQF 58 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHHCC------TTTEEE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHhhc------cCceEE
Confidence 5789999999999999999999999996 56888886421 11111 11000 146889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+.+. .
T Consensus 59 ~~~D~~-------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 131 (251)
T 1zk4_A 59 FQHDSS-------DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK 131 (251)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred EECCCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 999999 4444444443 59999999997532 2456788999999988877765432 1
Q ss_pred cc-eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 KL-IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~~-~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+. .+||++||...+...
T Consensus 132 ~~~~~iv~isS~~~~~~~-------------------------------------------------------------- 149 (251)
T 1zk4_A 132 GLGASIINMSSIEGFVGD-------------------------------------------------------------- 149 (251)
T ss_dssp SSCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred CCCCEEEEeCCchhccCC--------------------------------------------------------------
Confidence 44 789999997654321
Q ss_pred CCCchHHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..|.+.+.+ ..+++++++||+.|.++.....+ . ........ ....
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-------~--~~~~~~~~--------~~~~ 212 (251)
T 1zk4_A 150 PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-------G--AEEAMSQR--------TKTP 212 (251)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-------T--HHHHHTST--------TTCT
T ss_pred CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC-------c--hhhhHHHh--------hcCC
Confidence 13468999999999888654 35899999999999887542211 0 11111000 1111
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+++++|+|++++.++........ ++++++.++
T Consensus 213 ~~~~~~~~dva~~~~~l~~~~~~~~~--G~~~~v~gG 247 (251)
T 1zk4_A 213 MGHIGEPNDIAYICVYLASNESKFAT--GSEFVVDGG 247 (251)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHcCccccccc--CcEEEECCC
Confidence 23578999999999998864332222 789999887
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-18 Score=169.91 Aligned_cols=239 Identities=13% Similarity=0.118 Sum_probs=161.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC-------CCcCHHHHHHHHhhcChhhHHHHHhcCCchhhh
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA-------DAKSATVRFHNEIIGKDLFRVLKEKNGTHLNAL 82 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~-------~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~ 82 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+. ......+.+.+++ ..
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~---------~~--------- 83 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSPASGGSAAQSVVDEI---------TA--------- 83 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSSBTCTTSHHHHHHHHH---------HH---------
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCcccccccccccHHHHHHHHHHH---------Hh---------
Confidence 6789999999999999999999999996 557887762 1122222222111 11
Q ss_pred ccCceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH
Q 037479 83 ISEKITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a 148 (492)
...++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 84 ~~~~~~~~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~ 156 (322)
T 3qlj_A 84 AGGEAVADGSNVA-------DWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHA 156 (322)
T ss_dssp TTCEEEEECCCTT-------SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 1257889999999 5444445444 79999999997642 2467889999999999999987
Q ss_pred Hhccc---------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHH
Q 037479 149 KKCAK---------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLA 219 (492)
Q Consensus 149 ~~~~~---------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (492)
..... -.++|++||...+...
T Consensus 157 ~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-------------------------------------------------- 186 (322)
T 3qlj_A 157 AAYWRGLSKAGKAVDGRIINTSSGAGLQGS-------------------------------------------------- 186 (322)
T ss_dssp HHHHHHHHHTTCCCCEEEEEECCHHHHHCB--------------------------------------------------
T ss_pred HHHHHHccccCCCCCcEEEEEcCHHHccCC--------------------------------------------------
Confidence 64311 1489999996544211
Q ss_pred HhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCce
Q 037479 220 MKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGR 294 (492)
Q Consensus 220 ~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~ 294 (492)
.....|+.||+..+.+.+.+ ..++++..|+|+ +..+.... +... ..
T Consensus 187 ------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~---~~~~------~~------- 237 (322)
T 3qlj_A 187 ------------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET---VFAE------MM------- 237 (322)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC---SCCC---------------
T ss_pred ------------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh---hhhh------hh-------
Confidence 12458999999999888765 358999999998 54433211 1110 00
Q ss_pred eeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCC---------------cccHHHHHHHHHHHh
Q 037479 295 LTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRN---------------PLIYTNLQDYAYRYF 359 (492)
Q Consensus 295 ~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~---------------~~t~~e~~~~~~~~~ 359 (492)
........++.++|+|++++.++........ |+++++.++... ..+..|+.+.+.+.+
T Consensus 238 -----~~~~~~~~~~~pedva~~v~~L~s~~~~~it--G~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~ 310 (322)
T 3qlj_A 238 -----ATQDQDFDAMAPENVSPLVVWLGSAEARDVT--GKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLL 310 (322)
T ss_dssp -----------CCTTCGGGTHHHHHHHTSGGGGGCC--SCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHH
T ss_pred -----hccccccCCCCHHHHHHHHHHHhCccccCCC--CCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHh
Confidence 0111223456899999999998864333222 889998887211 236799999999998
Q ss_pred hcC
Q 037479 360 TKK 362 (492)
Q Consensus 360 ~~~ 362 (492)
+..
T Consensus 311 ~~~ 313 (322)
T 3qlj_A 311 GKA 313 (322)
T ss_dssp HHS
T ss_pred hcc
Confidence 864
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-19 Score=169.93 Aligned_cols=224 Identities=15% Similarity=0.147 Sum_probs=150.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ +..++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 62 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGA---TVAIADLDVMA---AQAVV-------------AG--------LENGGFA 62 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HT--------CTTCCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------HhcCCeE
Confidence 5789999999999999999999999996 56888886421 11111 11 1136788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.+..
T Consensus 63 ~~~D~~-------d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 135 (263)
T 3ak4_A 63 VEVDVT-------KRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAS 135 (263)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEEeCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999 4444545554 79999999997532 14577889999999999999876531
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ ..++|++||...+...
T Consensus 136 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 153 (263)
T 3ak4_A 136 NTKGVIVNTASLAAKVGA-------------------------------------------------------------- 153 (263)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred CCCeEEEEecccccccCC--------------------------------------------------------------
Confidence 2 4689999996543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCcc---ccCcCchHHHHHhccCceeeEEecCCC
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGW---AEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw---~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..|.+.+.+ ..+++++++||+.|.++.......+ ..+ .........+.. ..
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~ 223 (263)
T 3ak4_A 154 PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRG-MTPEAVRAEYVS---------LT 223 (263)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHT-SCHHHHHHHHHH---------TC
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccc-cCcHHHHHHHHh---------cC
Confidence 13468999999999888755 3589999999999987643110000 000 000111111111 11
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+++++|+|++++.++........ ++++++.++
T Consensus 224 p~~~~~~~~dvA~~v~~l~s~~~~~~t--G~~~~vdgG 259 (263)
T 3ak4_A 224 PLGRIEEPEDVADVVVFLASDAARFMT--GQGINVTGG 259 (263)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESSS
T ss_pred CCCCCcCHHHHHHHHHHHhCccccCCC--CCEEEECcC
Confidence 123588999999999998864332222 789999887
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.80 E-value=9.7e-19 Score=166.70 Aligned_cols=220 Identities=17% Similarity=0.148 Sum_probs=143.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|. +|+++.|+... .+.+. ++ +..++.+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 59 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGA---KVVIVDRDKAG---AERVA-------------GE--------IGDAALA 59 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH--------HCTTEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH-------------HH--------hCCceEE
Confidence 4689999999999999999999999996 56888886422 11111 11 1367899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhccc-
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCAK- 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~~- 153 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.....
T Consensus 60 ~~~D~~-------~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 132 (261)
T 3n74_A 60 VAADIS-------KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKE 132 (261)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999999 4444445444 78999999997541 245678899999999999888754311
Q ss_pred ------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 154 ------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 154 ------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
..++|++||...+...
T Consensus 133 ~~~~~~~~~iv~isS~~~~~~~---------------------------------------------------------- 154 (261)
T 3n74_A 133 NGAKGQECVILNVASTGAGRPR---------------------------------------------------------- 154 (261)
T ss_dssp HHHTTCCEEEEEECCTTTTSCC----------------------------------------------------------
T ss_pred cCCCCCCeEEEEeCchhhcCCC----------------------------------------------------------
Confidence 3369999996544211
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|.++......+ . ...... ......
T Consensus 155 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~--~~~~~~---------~~~~~~ 216 (261)
T 3n74_A 155 ----PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMG---E--DSEEIR---------KKFRDS 216 (261)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcc---c--CcHHHH---------HHHhhc
Confidence 23457999999999888755 358999999999988775432110 0 000000 111122
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....++.++|+|++++.++....... . |+++++.++
T Consensus 217 ~~~~~~~~~~dva~~~~~l~s~~~~~i-t-G~~i~vdgG 253 (261)
T 3n74_A 217 IPMGRLLKPDDLAEAAAFLCSPQASMI-T-GVALDVDGG 253 (261)
T ss_dssp CTTSSCCCHHHHHHHHHHHTSGGGTTC-C-SCEEEESTT
T ss_pred CCcCCCcCHHHHHHHHHHHcCCcccCc-C-CcEEEecCC
Confidence 233468899999999998886433222 2 899999988
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-18 Score=165.78 Aligned_cols=219 Identities=13% Similarity=0.066 Sum_probs=148.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|+ +|+++.|+.... +.+.+++ .. ...++.+
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~~---~~~~~~~---------~~---------~~~~~~~ 87 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGA---DVAIWYNSHPAD---EKAEHLQ---------KT---------YGVHSKA 87 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTC---EEEEEESSSCCH---HHHHHHH---------HH---------HCSCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHHH---------Hh---------cCCcceE
Confidence 6789999999999999999999999996 568888876432 1221110 00 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc------c---hhHHHHHHHhHHH----HHHHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF------D---ERYDVALDLNTFG----AKHVLNFSK 149 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~------~---~~~~~~~~~Nv~g----t~~ll~~a~ 149 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... + +.++..+++|+.| ++.+++.++
T Consensus 88 ~~~Dl~-------~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 160 (279)
T 3ctm_A 88 YKCNIS-------DPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFK 160 (279)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEeecC-------CHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999 4444444443 49999999997543 2 3467789999999 556666666
Q ss_pred hcccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 150 KCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 150 ~~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
+. +..+||++||...+.... .
T Consensus 161 ~~-~~~~iv~isS~~~~~~~~-------~--------------------------------------------------- 181 (279)
T 3ctm_A 161 KN-GKGSLIITSSISGKIVNI-------P--------------------------------------------------- 181 (279)
T ss_dssp HH-TCCEEEEECCCTTSCC-------------------------------------------------------------
T ss_pred hc-CCCeEEEECchHhccCCC-------C---------------------------------------------------
Confidence 64 567999999965432100 0
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..|.+++.+ ..+ ++.+++|+.|.++..... .......+... ..
T Consensus 182 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~---------~p 240 (279)
T 3ctm_A 182 --QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA---------SKDMKAKWWQL---------TP 240 (279)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC---------CHHHHHHHHHH---------ST
T ss_pred --CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc---------ChHHHHHHHHh---------CC
Confidence 23458999999999998765 246 999999999887654211 01111111100 01
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+++++|+|++++.++........ ++++++.++
T Consensus 241 ~~~~~~~~dvA~~~~~l~s~~~~~~t--G~~i~vdgG 275 (279)
T 3ctm_A 241 LGREGLTQELVGGYLYLASNASTFTT--GSDVVIDGG 275 (279)
T ss_dssp TCSCBCGGGTHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred ccCCcCHHHHHHHHHHHhCccccCcc--CCEEEECCC
Confidence 12478999999999998874332222 789999887
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.7e-18 Score=163.75 Aligned_cols=235 Identities=16% Similarity=0.130 Sum_probs=153.4
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC-------HHHHHHHHhhcChhhHHHHHhcCCchhh
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS-------ATVRFHNEIIGKDLFRVLKEKNGTHLNA 81 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~-------~~~r~~~~~~~~~~f~~l~~~~~~~~~~ 81 (492)
-+++|+++||||+|+||++++++|++.|. +|+++.|...... ..+++. ++ ...+..
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~-------- 74 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA---DIIACDICAPVSASVTYAPASPEDLD-ET-----ARLVED-------- 74 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCCTTCCSCCCCHHHHH-HH-----HHHHHT--------
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeccccccccccccccCHHHHH-HH-----HHHHHh--------
Confidence 36889999999999999999999999996 5588888532110 112221 00 000111
Q ss_pred hccCceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHH
Q 037479 82 LISEKITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
...++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.+++++
T Consensus 75 -~~~~~~~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~ 146 (280)
T 3pgx_A 75 -QGRKALTRVLDVR-------DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRA 146 (280)
T ss_dssp -TTCCEEEEECCTT-------CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred -cCCeEEEEEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence 1257889999999 4444445443 79999999997642 255778899999999999998
Q ss_pred HHhc----ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhh
Q 037479 148 SKKC----AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDL 223 (492)
Q Consensus 148 a~~~----~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (492)
+... +.-.++|++||...+...
T Consensus 147 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 172 (280)
T 3pgx_A 147 TVPAMIEAGNGGSIVVVSSSAGLKAT------------------------------------------------------ 172 (280)
T ss_dssp HHHHHHHHCSCEEEEEECCGGGTSCC------------------------------------------------------
T ss_pred HHHHHHhcCCCCEEEEEcchhhccCC------------------------------------------------------
Confidence 7542 124579999996544221
Q ss_pred hccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEE
Q 037479 224 GIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298 (492)
Q Consensus 224 ~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~ 298 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++...+. .....+..... ....+
T Consensus 173 --------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~-~~~~~ 235 (280)
T 3pgx_A 173 --------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--------AMMEIFARHPS-FVHSF 235 (280)
T ss_dssp --------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--------HHHHHHHHCGG-GGGGS
T ss_pred --------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--------hhhhhhhcCch-hhhhh
Confidence 12458999999999888765 3589999999999988764320 00011100000 00000
Q ss_pred ecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 299 LGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 299 ~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.........++.++|+|++++.++........ |+++++.+|
T Consensus 236 ~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~it--G~~i~vdGG 276 (280)
T 3pgx_A 236 PPMPVQPNGFMTADEVADVVAWLAGDGSGTLT--GTQIPVDKG 276 (280)
T ss_dssp CCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCS--SCEEEESTT
T ss_pred hhcccCCCCCCCHHHHHHHHHHHhCccccCCC--CCEEEECCC
Confidence 00111112488999999999998874433222 889999887
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=164.63 Aligned_cols=196 Identities=15% Similarity=0.166 Sum_probs=140.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCC----CeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNV----KKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V----~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+|+|+||||||+||++++++|++.|+.- .+|+++.|+... .+.+..+ ++. ...++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~---~~~~~~~---------~~~---------~~~~~ 60 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD---LEKISLE---------CRA---------EGALT 60 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH---HHHHHHH---------HHT---------TTCEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHH---HHHHHHH---------HHc---------cCCee
Confidence 6899999999999999999999999610 056888885321 1222111 111 02568
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-- 151 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (492)
.++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 61 ~~~~~D~~-------~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (244)
T 2bd0_A 61 DTITADIS-------DMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALME 133 (244)
T ss_dssp EEEECCTT-------SHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred eEEEecCC-------CHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 89999999 4444444443 69999999997543 2457788999999999999987542
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..+||++||..++...
T Consensus 134 ~~~~~~iv~isS~~~~~~~------------------------------------------------------------- 152 (244)
T 2bd0_A 134 RQHSGHIFFITSVAATKAF------------------------------------------------------------- 152 (244)
T ss_dssp HHTCEEEEEECCGGGTSCC-------------------------------------------------------------
T ss_pred hCCCCEEEEEecchhcCCC-------------------------------------------------------------
Confidence 145799999997655321
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..|.+++.+ ..+++++++||+.|+++.....+. . . .
T Consensus 153 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~--------------------~-~ 204 (244)
T 2bd0_A 153 -RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------E--------------------M-Q 204 (244)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------T--------------------T-G
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc------c--------------------c-c
Confidence 23468999999999988644 358999999999999876432110 0 0 1
Q ss_pred cceeehhhhhhHHHHHHHh
Q 037479 306 VDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~ 324 (492)
..+++++|+|++++.++..
T Consensus 205 ~~~~~~~dva~~~~~l~~~ 223 (244)
T 2bd0_A 205 ALMMMPEDIAAPVVQAYLQ 223 (244)
T ss_dssp GGSBCHHHHHHHHHHHHTS
T ss_pred ccCCCHHHHHHHHHHHHhC
Confidence 2578999999999998874
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.2e-19 Score=167.41 Aligned_cols=216 Identities=15% Similarity=0.157 Sum_probs=142.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE-EecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE-
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLL-LRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL- 89 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l-vR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~- 89 (492)
+|+|+||||||+||++++++|++.|+ +|+++ .|+... .+.+.+ .++.. ..++..
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~---~v~~~~~r~~~~---~~~~~~---------~~~~~---------~~~~~~~ 56 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGF---ALAIHYGQNREK---AEEVAE---------EARRR---------GSPLVAV 56 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESSCHHH---HHHHHH---------HHHHT---------TCSCEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHHH---HHHHHH---------HHHhc---------CCceEEE
Confidence 47999999999999999999999996 45676 564321 111111 11111 134566
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (492)
+.+|++ +.+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+ ++.
T Consensus 57 ~~~D~~-------~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 129 (245)
T 2ph3_A 57 LGANLL-------EAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA 129 (245)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EeccCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc
Confidence 899999 444444443 479999999997542 2456788999999966655544 443
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..+||++||...+...
T Consensus 130 -~~~~iv~~sS~~~~~~~-------------------------------------------------------------- 146 (245)
T 2ph3_A 130 -RFGRIVNITSVVGILGN-------------------------------------------------------------- 146 (245)
T ss_dssp -TCEEEEEECCTHHHHCC--------------------------------------------------------------
T ss_pred -CCCEEEEEeChhhccCC--------------------------------------------------------------
Confidence 56899999996543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.+ ..+++++++||+.|.++.....+ ......+..+ ....
T Consensus 147 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~---------~~~~ 208 (245)
T 2ph3_A 147 PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP---------QEVKEAYLKQ---------IPAG 208 (245)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---------HHHHHHHHHT---------CTTC
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC---------HHHHHHHHhc---------CCCC
Confidence 12357999999888877654 34899999999999876532111 1111111111 0123
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++++|+|++++.++....... . +++|++.++
T Consensus 209 ~~~~~~dva~~~~~l~~~~~~~~-~-G~~~~v~gg 241 (245)
T 2ph3_A 209 RFGRPEEVAEAVAFLVSEKAGYI-T-GQTLCVDGG 241 (245)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTC-C-SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCcccccc-c-CCEEEECCC
Confidence 57899999999999886432222 2 789999886
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-19 Score=167.05 Aligned_cols=209 Identities=12% Similarity=0.132 Sum_probs=138.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|+|+||||+|+||++++++|++.|.. .+|+++.|+.... +.+. +. ...++.+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~-~~V~~~~r~~~~~---~~l~-------------~~--------~~~~~~~ 55 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKA---TELK-------------SI--------KDSRVHV 55 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGC---HHHH-------------TC--------CCTTEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCC-cEEEEEecCHHHH---HHHH-------------hc--------cCCceEE
Confidence 46899999999999999999999999821 2568888865432 1111 00 0257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc---------CccEEEEcccccC-c-------chhHHHHHHHhHHHHHHHHHHHHhcc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN---------KLDVVINLAATTN-F-------DERYDVALDLNTFGAKHVLNFSKKCA 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~---------~vd~Vih~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||... . .+.++..+++|+.|+.++++++....
T Consensus 56 ~~~D~~-------~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 128 (250)
T 1yo6_A 56 LPLTVT-------CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLL 128 (250)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHH
T ss_pred EEeecC-------CHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999 4444445554 7999999999765 1 24567889999999999998876531
Q ss_pred ---------c-----ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHH
Q 037479 153 ---------K-----LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITL 218 (492)
Q Consensus 153 ---------~-----~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (492)
+ ..+||++||...+.... .+..++
T Consensus 129 ~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~~~--------------------------------------- 166 (250)
T 1yo6_A 129 KNAASKESGDQLSVSRAAVITISSGLGSITDN---TSGSAQ--------------------------------------- 166 (250)
T ss_dssp HHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC---CSTTSS---------------------------------------
T ss_pred hhcccccCCCcccCCCcEEEEeccCccccCCc---cccccc---------------------------------------
Confidence 2 56899999976543221 000000
Q ss_pred HHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCc
Q 037479 219 AMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKG 293 (492)
Q Consensus 219 ~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g 293 (492)
.+...|+.||+..|.+++.+ ..++++.++||+.|.++....
T Consensus 167 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------- 212 (250)
T 1yo6_A 167 -------------FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------------- 212 (250)
T ss_dssp -------------SCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------
T ss_pred -------------CCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC---------------------
Confidence 23468999999999988765 348999999999887643310
Q ss_pred eeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecC
Q 037479 294 RLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGS 340 (492)
Q Consensus 294 ~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~ 340 (492)
..+++.+++|++++.++........ +..+.+.+
T Consensus 213 ------------~~~~~~~~~a~~~~~~~~~~~~~~~--G~~~~~~g 245 (250)
T 1yo6_A 213 ------------NAALTVEQSTAELISSFNKLDNSHN--GRFFMRNL 245 (250)
T ss_dssp ------------------HHHHHHHHHHHTTCCGGGT--TCEEETTE
T ss_pred ------------CCCCCHHHHHHHHHHHHhcccccCC--CeEEEECC
Confidence 1357899999999999874322111 55665544
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-18 Score=165.41 Aligned_cols=220 Identities=15% Similarity=0.095 Sum_probs=150.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+.. .+...+++ .. ...++.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~----~~~~~~~~---------~~---------~~~~~~~ 83 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGA---HVLAWGRTDG----VKEVADEI---------AD---------GGGSAEA 83 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTH----HHHHHHHH---------HT---------TTCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCHHH----HHHHHHHH---------Hh---------cCCcEEE
Confidence 5789999999999999999999999996 4577776522 12221111 11 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhc------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
+.+|+++ .+..+.+. .++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 84 ~~~Dv~d-------~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 156 (273)
T 3uf0_A 84 VVADLAD-------LEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG 156 (273)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCC-------HHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999994 43333332 379999999997643 2457889999999999999987432 14
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||...+... ..
T Consensus 157 ~g~IV~isS~~~~~~~--------------------------------------------------------------~~ 174 (273)
T 3uf0_A 157 SGRIVTIASMLSFQGG--------------------------------------------------------------RN 174 (273)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------------SS
T ss_pred CCEEEEEcchHhcCCC--------------------------------------------------------------CC
Confidence 5689999996544221 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+.+.+ ..++++.+++|+.|.++...... ........+..+ .....+
T Consensus 175 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~p~~r~ 238 (273)
T 3uf0_A 175 VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALR-------ADDERAAEITAR---------IPAGRW 238 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-------TSHHHHHHHHHH---------STTSSC
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcc-------cCHHHHHHHHhc---------CCCCCC
Confidence 468999999999888765 35899999999999876542110 001111111111 112356
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..++|+|++++.++........ |+++++.+|
T Consensus 239 ~~pedva~~v~~L~s~~a~~it--G~~i~vdGG 269 (273)
T 3uf0_A 239 ATPEDMVGPAVFLASDAASYVH--GQVLAVDGG 269 (273)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCHHHHHHHHHHHhCchhcCCc--CCEEEECcC
Confidence 7899999999998875333222 889999987
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-18 Score=162.02 Aligned_cols=210 Identities=12% Similarity=0.113 Sum_probs=146.4
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
..+++|+||||||||+||++++++|++.|....+|+++.|+.......+.+. +. ..++
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~-------------~~---------~~~~ 74 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-------------KN---------HSNI 74 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-------------HH---------CTTE
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhh-------------cc---------CCce
Confidence 4478899999999999999999999999833236789999765432221111 11 2578
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc---------CccEEEEcccccC-c-------chhHHHHHHHhHHHHHHHHHHHHh
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN---------KLDVVINLAATTN-F-------DERYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~---------~vd~Vih~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
.++.+|+++ .+..+.+++ ++|+|||+||... . .+.++..+++|+.|+.++++++..
T Consensus 75 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 147 (267)
T 1sny_A 75 HILEIDLRN-------FDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLP 147 (267)
T ss_dssp EEEECCTTC-------GGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEEEecCCC-------hHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHH
Confidence 999999994 444445444 7999999999764 1 245678899999999999998865
Q ss_pred cc---------c-----ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHH
Q 037479 151 CA---------K-----LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAI 216 (492)
Q Consensus 151 ~~---------~-----~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (492)
.. + ..+||++||...+.... .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------~--------------------------------------- 182 (267)
T 1sny_A 148 LLKKAAKANESQPMGVGRAAIINMSSILGSIQGN------T--------------------------------------- 182 (267)
T ss_dssp HHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC------C---------------------------------------
T ss_pred HHhhcccccccccccCCCceEEEEecccccccCC------C---------------------------------------
Confidence 31 1 36799999976653321 0
Q ss_pred HHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc
Q 037479 217 TLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG 291 (492)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~ 291 (492)
......|+.||+..|.+++.+ ..+++++++||+.|..+...+
T Consensus 183 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------- 229 (267)
T 1sny_A 183 --------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------------- 229 (267)
T ss_dssp --------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------------
T ss_pred --------------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------------
Confidence 013457999999999988765 358999999999886543311
Q ss_pred CceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecC
Q 037479 292 KGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGS 340 (492)
Q Consensus 292 ~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~ 340 (492)
...+..+++|+.++.++........ +..+++.+
T Consensus 230 --------------~~~~~~~~~a~~~~~~~~~~~~~~~--G~~~~~~g 262 (267)
T 1sny_A 230 --------------SAPLDVPTSTGQIVQTISKLGEKQN--GGFVNYDG 262 (267)
T ss_dssp --------------TCSBCHHHHHHHHHHHHHHCCGGGT--TCEECTTS
T ss_pred --------------CCCCCHHHHHHHHHHHHHhcCcCCC--CcEEccCC
Confidence 0246789999999999875322211 56666544
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=169.63 Aligned_cols=218 Identities=16% Similarity=0.124 Sum_probs=135.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+.+ .+.... ...++.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~---~Vv~~~r~~~~---~~~~~~---------~l~~~~-------~~~~~~~ 63 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC---KVAIADIRQDS---IDKALA---------TLEAEG-------SGPEVMG 63 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHHT-------CGGGEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHH---------HHHhcC-------CCCeEEE
Confidence 5689999999999999999999999996 56888886432 111111 111111 0137899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++....
T Consensus 64 ~~~Dl~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 136 (319)
T 3ioy_A 64 VQLDVA-------SREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVER 136 (319)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 999999 4444444443 68999999996532 24577899999999999999886642
Q ss_pred ------cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 153 ------KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 153 ------~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
+-.++|++||...+...
T Consensus 137 ~~~~~~~~g~iV~isS~a~~~~~--------------------------------------------------------- 159 (319)
T 3ioy_A 137 VKAGEQKGGHVVNTASMAAFLAA--------------------------------------------------------- 159 (319)
T ss_dssp HHTTSCCCCEEEEECCGGGTCCC---------------------------------------------------------
T ss_pred hhccCCCCcEEEEecccccccCC---------------------------------------------------------
Confidence 13469999996654321
Q ss_pred ccccCCCCchHHHHHH----HHHHHHHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC
Q 037479 227 RAKIYGWPNTYVFTKV----MGEMFIEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~----~aE~~v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~ 301 (492)
.....|+.||+ ++|.+..++ ..++++++++|+.|.++...+....... ...............+
T Consensus 160 -----~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--- 228 (319)
T 3ioy_A 160 -----GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDA---LKGEVKPVDKTAVERL--- 228 (319)
T ss_dssp -----SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------------
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchh---hcccccchhHHHHHHH---
Confidence 12458999999 666665555 4589999999999987654321100000 0000000000000000
Q ss_pred CCcccceeehhhhhhHHHHHHHh
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~ 324 (492)
.......++++++|++++.++..
T Consensus 229 ~~~~~~~~~pe~vA~~~~~al~~ 251 (319)
T 3ioy_A 229 AGVHEFGMEPDVIGARVIEAMKA 251 (319)
T ss_dssp CCGGGSSBCHHHHHHHHHHHHHT
T ss_pred HHhhhcCCCHHHHHHHHHHHHHc
Confidence 01111237999999999999874
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.79 E-value=3e-18 Score=165.55 Aligned_cols=220 Identities=15% Similarity=0.086 Sum_probs=149.8
Q ss_pred cCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+|+||||+ |+||++++++|++.|. +|+++.|+.. ..+.+. .+..+. .++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~----------~l~~~~---------~~~ 73 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGA---QLAFTYATPK---LEKRVR----------EIAKGF---------GSD 73 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC---EEEEEESSGG---GHHHHH----------HHHHHT---------TCC
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCCHH---HHHHHH----------HHHHhc---------CCe
Confidence 578999999999 9999999999999996 5688888653 111221 111111 236
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
.++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 74 ~~~~~Dl~-------~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 146 (285)
T 2p91_A 74 LVVKCDVS-------LDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELL 146 (285)
T ss_dssp CEEECCTT-------CHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 78899999 4444444443 78999999997532 14567889999999999999997
Q ss_pred hcc--cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 150 KCA--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 150 ~~~--~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
... +-.++|++||...+...
T Consensus 147 ~~~~~~~g~iv~isS~~~~~~~---------------------------------------------------------- 168 (285)
T 2p91_A 147 PLMEGRNGAIVTLSYYGAEKVV---------------------------------------------------------- 168 (285)
T ss_dssp GGGTTSCCEEEEEECGGGTSBC----------------------------------------------------------
T ss_pred HHHHHcCCEEEEEccchhccCC----------------------------------------------------------
Confidence 642 22589999996543211
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..+.+.+.+ ..++++++++|+.|.++.....+ ........+....
T Consensus 169 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~-------- 229 (285)
T 2p91_A 169 ----PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT-------GFHLLMEHTTKVN-------- 229 (285)
T ss_dssp ----TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT-------THHHHHHHHHHHS--------
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc-------chHHHHHHHHhcC--------
Confidence 12457999999999988755 35899999999999987643211 1111111111100
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+.+++|+|++++.++........ +++|++.++
T Consensus 230 -p~~~~~~~~dva~~~~~l~s~~~~~~t--G~~~~vdgg 265 (285)
T 2p91_A 230 -PFGKPITIEDVGDTAVFLCSDWARAIT--GEVVHVDNG 265 (285)
T ss_dssp -TTSSCCCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred -CCCCCcCHHHHHHHHHHHcCCcccCCC--CCEEEECCC
Confidence 112367899999999998864332222 789999887
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=165.39 Aligned_cols=216 Identities=16% Similarity=0.167 Sum_probs=147.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... ..++.+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~--------------------------------~~~~~~ 50 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGS---KVIDLSIHDPG--------------------------------EAKYDH 50 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESSCCC--------------------------------SCSSEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEecCccc--------------------------------CCceEE
Confidence 5789999999999999999999999996 56888886542 145788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++....
T Consensus 51 ~~~Dl~-------~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 123 (264)
T 2dtx_A 51 IECDVT-------NPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS 123 (264)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 999999 4444444443 79999999997542 24578899999999999998886531
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 141 (264)
T 2dtx_A 124 RDPSIVNISSVQASIIT--------------------------------------------------------------K 141 (264)
T ss_dssp SSCEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCcEEEEECCchhccCC--------------------------------------------------------------C
Confidence 35689999997654321 1
Q ss_pred CCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCch---HHHHHhccCceeeEEecCCCcc
Q 037479 233 WPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTI---DSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
....|+.||+..|.+.+.+ ...+++++++|+.|.++..........+ ... ......+.. ....
T Consensus 142 ~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~p~ 211 (264)
T 2dtx_A 142 NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVG-SDPMRIEKKISEWGH---------EHPM 211 (264)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHC-SCHHHHHHHHHHHHH---------HSTT
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccc-cCchhhHHHHHHHHh---------cCCC
Confidence 2468999999999988765 2239999999999876432100000000 000 011111110 0112
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+++++|+|++++.++........ ++++++.++
T Consensus 212 ~~~~~p~dvA~~v~~l~s~~~~~~t--G~~i~vdGG 245 (264)
T 2dtx_A 212 QRIGKPQEVASAVAFLASREASFIT--GTCLYVDGG 245 (264)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCC--CcEEEECCC
Confidence 3578999999999998874332222 789999887
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=164.26 Aligned_cols=221 Identities=19% Similarity=0.162 Sum_probs=151.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|. +|+++.|+... .+.+. ++ ...++.+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 58 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA---EVLLTGRNESN---IARIR-------------EE--------FGPRVHA 58 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH--------HGGGEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------hCCcceE
Confidence 5789999999999999999999999996 56888886321 11211 11 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-KL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~ 154 (492)
+.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++.... .-
T Consensus 59 ~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (255)
T 4eso_A 59 LRSDIA-------DLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG 131 (255)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred EEccCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence 999999 444443333 379999999997642 24578889999999999999997642 23
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||...+... ...
T Consensus 132 g~iv~isS~~~~~~~--------------------------------------------------------------~~~ 149 (255)
T 4eso_A 132 GSIVFTSSVADEGGH--------------------------------------------------------------PGM 149 (255)
T ss_dssp EEEEEECCGGGSSBC--------------------------------------------------------------TTB
T ss_pred CEEEEECChhhcCCC--------------------------------------------------------------CCc
Confidence 489999996644321 134
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+.+.+ ..++++..++|+.|.++..... ++.+ .....+...... ......+.
T Consensus 150 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~--~~~~~~~~~~~~---------~~p~~r~~ 217 (255)
T 4eso_A 150 SVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVA-GITE--AERAEFKTLGDN---------ITPMKRNG 217 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCT-TSCH--HHHHHHHHHHHH---------HSTTSSCB
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccc-cCCh--hhHHHHHHHHhc---------cCCCCCCc
Confidence 68999999999888755 3489999999999988754321 0000 000011111100 01123467
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++|+|++++.++.. .... . |+++++.+|
T Consensus 218 ~pedvA~~v~~L~s~-~~~i-t-G~~i~vdGG 246 (255)
T 4eso_A 218 TADEVARAVLFLAFE-ATFT-T-GAKLAVDGG 246 (255)
T ss_dssp CHHHHHHHHHHHHHT-CTTC-C-SCEEEESTT
T ss_pred CHHHHHHHHHHHcCc-CcCc-c-CCEEEECCC
Confidence 899999999988874 3222 2 889999998
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=170.35 Aligned_cols=170 Identities=17% Similarity=0.260 Sum_probs=121.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH--HHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA--TVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~--~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+||||||||+||++++++|++.|+ +|++.+|+..+... .+.+.+ .++. ...++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~---~V~~~~r~~~~r~~~~~~~l~~---------~~~~---------~~~~~ 61 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGH---RVYASMRDIVGRNASNVEAIAG---------FARD---------NDVDL 61 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCTTTTTHHHHHHHHH---------HHHH---------HTCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEecCcccccCHHHHHHHHH---------HHHh---------cCCcE
Confidence 3579999999999999999999999996 56888987543332 122211 0011 12578
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK---- 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~---- 149 (492)
.++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 62 ~~~~~Dvt-------d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~ 134 (324)
T 3u9l_A 62 RTLELDVQ-------SQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMR 134 (324)
T ss_dssp EEEECCTT-------CHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEeecC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999 5544545554 79999999996532 24567889999999999999983
Q ss_pred hcccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 150 KCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 150 ~~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
+. +..++|++||........
T Consensus 135 ~~-~~g~iV~isS~~~~~~~~----------------------------------------------------------- 154 (324)
T 3u9l_A 135 RQ-KHGLLIWISSSSSAGGTP----------------------------------------------------------- 154 (324)
T ss_dssp HH-TCEEEEEECCGGGTSCCC-----------------------------------------------------------
T ss_pred hc-CCCEEEEEecchhccCCC-----------------------------------------------------------
Confidence 33 557899999965542210
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
.....|+.||+..|.+.+.+ ..|+++++|+|+.|.++.
T Consensus 155 --~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 155 --PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp --SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred --CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence 12467999999999988765 358999999999997654
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=166.08 Aligned_cols=221 Identities=19% Similarity=0.172 Sum_probs=143.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE-EecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLL-LRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l-vR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.++|+||||||+|+||++++++|++.|++ |+++ .|+.. ..+.+.++ +.+ ...++.
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~---V~~~~~~~~~---~~~~~~~~---------~~~---------~~~~~~ 79 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWR---VGVNYAANRE---AADAVVAA---------ITE---------SGGEAV 79 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH---HHHHHHHH---------HHH---------TTCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCChh---HHHHHHHH---------HHh---------cCCcEE
Confidence 45789999999999999999999999974 4555 33321 11221111 111 125789
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+....
T Consensus 80 ~~~~Dl~-------~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 152 (272)
T 4e3z_A 80 AIPGDVG-------NAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMS 152 (272)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHC
T ss_pred EEEcCCC-------CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 9999999 4444444443 78999999997643 24567889999999999998876531
Q ss_pred -----cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 153 -----KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 153 -----~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
+..+||++||........
T Consensus 153 ~~~~~~~g~iv~isS~~~~~~~~--------------------------------------------------------- 175 (272)
T 4e3z_A 153 RLYSGQGGAIVNVSSMAAILGSA--------------------------------------------------------- 175 (272)
T ss_dssp GGGTCCCEEEEEECCTHHHHCCT---------------------------------------------------------
T ss_pred HhccCCCCEEEEEcchHhccCCC---------------------------------------------------------
Confidence 245799999965542210
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..|.+.+.+ ..++++.+++|+.|.++..... ......... ...
T Consensus 176 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~---------~~~ 234 (272)
T 4e3z_A 176 ----TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--------GLPDRAREM---------APS 234 (272)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------------------C
T ss_pred ----CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc--------CChHHHHHH---------hhc
Confidence 12357999999999887654 3489999999999988754220 000011000 111
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+..++|+|++++.++........ |++|++.+|
T Consensus 235 ~~~~~~~~~edvA~~i~~l~s~~~~~~t--G~~i~vdgG 271 (272)
T 4e3z_A 235 VPMQRAGMPEEVADAILYLLSPSASYVT--GSILNVSGG 271 (272)
T ss_dssp CTTSSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCCCcCHHHHHHHHHHHhCCcccccc--CCEEeecCC
Confidence 1223466799999999998864333222 889999876
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.6e-19 Score=169.41 Aligned_cols=228 Identities=14% Similarity=0.094 Sum_probs=150.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|+ +|+++.|+... .+.+. ..+++. ..++.+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~---------~~~~~~ 75 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL---RVFVCARGEEG---LRTTL---------KELREA---------GVEADG 75 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCceEE
Confidence 5789999999999999999999999996 56888886421 11111 111111 246888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 76 ~~~Dv~-------~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~ 148 (277)
T 2rhc_B 76 RTCDVR-------SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 148 (277)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHh
Confidence 999999 4444444443 79999999997532 2456788999999999999988664
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..++|++||.......
T Consensus 149 ~~~~g~iv~isS~~~~~~~------------------------------------------------------------- 167 (277)
T 2rhc_B 149 ERGTGRIVNIASTGGKQGV------------------------------------------------------------- 167 (277)
T ss_dssp HHTEEEEEEECCGGGTSCC-------------------------------------------------------------
T ss_pred hcCCeEEEEECccccccCC-------------------------------------------------------------
Confidence 135789999996543211
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCc-cccCc-CchHHHHHhccCceeeEEecCCC
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPG-WAEGI-RTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~g-w~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..|.+.+.+ ..++++++++|+.|.++....... +.... .........+.. ..
T Consensus 168 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 237 (277)
T 2rhc_B 168 -VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA---------RV 237 (277)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH---------HS
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh---------cC
Confidence 12468999999999888765 357999999999998754211000 00000 000011111110 01
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....++.++|+|++++.++........ ++++++.++
T Consensus 238 p~~r~~~~~dvA~~v~~l~s~~~~~~t--G~~~~vdGG 273 (277)
T 2rhc_B 238 PIGRYVQPSEVAEMVAYLIGPGAAAVT--AQALNVCGG 273 (277)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCCC--CcEEEECCC
Confidence 123588999999999998864332222 789999887
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.8e-19 Score=167.14 Aligned_cols=214 Identities=14% Similarity=0.083 Sum_probs=146.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ +..++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 55 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA---RVVLADVLDEE---GAATA-------------RE--------LGDAARY 55 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HT--------TGGGEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------hCCceeE
Confidence 5789999999999999999999999996 56888886321 11111 11 1246788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+ ++.
T Consensus 56 ~~~D~~-------~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 128 (254)
T 1hdc_A 56 QHLDVT-------IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA 128 (254)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 999999 4444445544 79999999997542 2457888999999998665544 333
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||...+...
T Consensus 129 -~~g~iv~isS~~~~~~~-------------------------------------------------------------- 145 (254)
T 1hdc_A 129 -GGGSIVNISSAAGLMGL-------------------------------------------------------------- 145 (254)
T ss_dssp -TCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred -CCCEEEEECchhhccCC--------------------------------------------------------------
Confidence 46799999997654221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCC-ccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFP-GWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~-gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..|.+.+.+ ..+++++++||+.|.++.....+ .+... + ......
T Consensus 146 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~----------~---------~~~~p~ 206 (254)
T 1hdc_A 146 ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEG----------N---------YPNTPM 206 (254)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTT----------S---------CTTSTT
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHH----------H---------HhcCCC
Confidence 13468999999999888755 35899999999999876421100 00000 0 000111
Q ss_pred ccee-ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVI-PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v-~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+. +++|+|++++.++........ ++++++.++
T Consensus 207 ~~~~~~~~dvA~~v~~l~s~~~~~~t--G~~~~vdgG 241 (254)
T 1hdc_A 207 GRVGNEPGEIAGAVVKLLSDTSSYVT--GAELAVDGG 241 (254)
T ss_dssp SSCB-CHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCCCHHHHHHHHHHHhCchhcCCC--CCEEEECCC
Confidence 2356 899999999998864332222 789999887
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=168.05 Aligned_cols=219 Identities=14% Similarity=0.149 Sum_probs=146.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|. +|+++.|+... .+.+.+ .++. ...++.+
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~~---------~l~~---------~~~~~~~ 97 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVS---HVICISRTQKS---CDSVVD---------EIKS---------FGYESSG 97 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS---EEEEEESSHHH---HHHHHH---------HHHT---------TTCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCC---EEEEEcCCHHH---HHHHHH---------HHHh---------cCCceeE
Confidence 4679999999999999999999999986 55777665321 111111 1111 0256889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 98 ~~~Dl~-------d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 170 (285)
T 2c07_A 98 YAGDVS-------KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN 170 (285)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 999999 444444444 379999999997642 2457788999999988888877532 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||...+... .
T Consensus 171 ~~~~iv~isS~~~~~~~--------------------------------------------------------------~ 188 (285)
T 2c07_A 171 RYGRIINISSIVGLTGN--------------------------------------------------------------V 188 (285)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------------T
T ss_pred CCCEEEEECChhhccCC--------------------------------------------------------------C
Confidence 45799999997544221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+.+.+ ..+++++++||+.|.++...... ......+... .....
T Consensus 189 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~---------~~~~~ 250 (285)
T 2c07_A 189 GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---------EQIKKNIISN---------IPAGR 250 (285)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---------HHHHHHHHTT---------CTTSS
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC---------HHHHHHHHhh---------CCCCC
Confidence 2457999999888887654 35899999999999876542211 1111111111 11124
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+|++++.++........ ++++++.++
T Consensus 251 ~~~~~dvA~~~~~l~~~~~~~~~--G~~i~v~gG 282 (285)
T 2c07_A 251 MGTPEEVANLACFLSSDKSGYIN--GRVFVIDGG 282 (285)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCCCcCCCC--CCEEEeCCC
Confidence 78999999999998864332222 789999886
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=165.30 Aligned_cols=220 Identities=16% Similarity=0.130 Sum_probs=149.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||++++++|++.|. +|+++.|+... ..+.+.++ +.+ ...++.+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~--~~~~~~~~---------~~~---------~~~~~~~ 83 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGL---KVWINYRSNAE--VADALKNE---------LEE---------KGYKAAV 83 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHH---------HHH---------TTCCEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHHH---------HHh---------cCCceEE
Confidence 5689999999999999999999999996 56888885321 11111111 111 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 84 ~~~D~~-------~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 156 (271)
T 4iin_A 84 IKFDAA-------SESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS 156 (271)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc
Confidence 999999 4444444443 79999999997643 2457888999999999988877542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 157 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 174 (271)
T 4iin_A 157 RFGSVVNVASIIGERGN--------------------------------------------------------------M 174 (271)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------------T
T ss_pred CCCEEEEEechhhcCCC--------------------------------------------------------------C
Confidence 44689999986543211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++..++|+.|..+.....+. ... ...........
T Consensus 175 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~~---------~~~~~~~~~~~ 236 (271)
T 4iin_A 175 GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD---------ELK---------ADYVKNIPLNR 236 (271)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------------------------CGGGCTTCS
T ss_pred CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH---------HHH---------HHHHhcCCcCC
Confidence 3468999999999988755 368999999999987765432211 000 01111122335
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+.+++|+|++++.++........ |+++++.+|
T Consensus 237 ~~~p~dvA~~i~~l~s~~~~~it--G~~i~vdGG 268 (271)
T 4iin_A 237 LGSAKEVAEAVAFLLSDHSSYIT--GETLKVNGG 268 (271)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCCCcCCCc--CCEEEeCCC
Confidence 78899999999998875433222 889999887
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-18 Score=166.04 Aligned_cols=221 Identities=16% Similarity=0.170 Sum_probs=153.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|. +|+++.|+.... .+.+.. . .++ ...++.+
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~--~~~~~~-~---------~~~--------~~~~~~~ 101 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGA---NIAIAYLDEEGD--ANETKQ-Y---------VEK--------EGVKCVL 101 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHHH--HHHHHH-H---------HHT--------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCchHH--HHHHHH-H---------HHh--------cCCcEEE
Confidence 5789999999999999999999999996 558888864321 111110 0 011 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA-K 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~ 153 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.... .
T Consensus 102 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 174 (291)
T 3ijr_A 102 LPGDLS-------DEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ 174 (291)
T ss_dssp EESCTT-------SHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT
T ss_pred EECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 999999 4444444443 78999999996532 24578899999999999999997642 3
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||...+... ..
T Consensus 175 ~g~iv~isS~~~~~~~--------------------------------------------------------------~~ 192 (291)
T 3ijr_A 175 GDVIINTASIVAYEGN--------------------------------------------------------------ET 192 (291)
T ss_dssp TCEEEEECCTHHHHCC--------------------------------------------------------------TT
T ss_pred CCEEEEEechHhcCCC--------------------------------------------------------------CC
Confidence 3589999997655321 13
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..|.+.+.+ ..++++..++|+.|.++.... . . .......+. .......+
T Consensus 193 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~----~-~~~~~~~~~---------~~~p~~r~ 255 (291)
T 3ijr_A 193 LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS---S----F-DEKKVSQFG---------SNVPMQRP 255 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH---H----S-CHHHHHHTT---------TTSTTSSC
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc---c----C-CHHHHHHHH---------ccCCCCCC
Confidence 468999999999888765 348999999999998764210 0 0 011111111 12233457
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..++|+|++++.++........ |+++++.+|
T Consensus 256 ~~p~dvA~~v~~L~s~~~~~it--G~~i~vdGG 286 (291)
T 3ijr_A 256 GQPYELAPAYVYLASSDSSYVT--GQMIHVNGG 286 (291)
T ss_dssp BCGGGTHHHHHHHHSGGGTTCC--SCEEEESSS
T ss_pred cCHHHHHHHHHHHhCCccCCCc--CCEEEECCC
Confidence 8899999999998875433222 889999887
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=167.67 Aligned_cols=223 Identities=17% Similarity=0.131 Sum_probs=153.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.+++. . ...++.+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~~~---------~---------~~~~~~~ 61 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGA---KVVVTARNGNA---LAELTDEIA---------G---------GGGEAAA 61 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEECCSCHHH---HHHHHHHHT---------T---------TTCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHHH---------h---------cCCcEEE
Confidence 5789999999999999999999999996 55788776421 222221110 0 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 62 ~~~Dv~-------~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 134 (280)
T 3tox_A 62 LAGDVG-------DEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAA 134 (280)
T ss_dssp CCCCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999 4444444443 79999999996521 24578899999999999999876431
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|++||...+....
T Consensus 135 ~~~g~iv~isS~~~~~~~~------------------------------------------------------------- 153 (280)
T 3tox_A 135 LGGGSLTFTSSFVGHTAGF------------------------------------------------------------- 153 (280)
T ss_dssp TTCEEEEEECCSBTTTBCC-------------------------------------------------------------
T ss_pred cCCCEEEEEcChhhCcCCC-------------------------------------------------------------
Confidence 345899999965441110
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCC-CCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEP-FPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p-~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++.... .++ . .......+. .....
T Consensus 154 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---~---~~~~~~~~~---------~~~p~ 218 (280)
T 3tox_A 154 AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPG---A---APETRGFVE---------GLHAL 218 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTT---C---CTHHHHHHH---------TTSTT
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccc---c---CHHHHHHHh---------ccCcc
Confidence 23468999999999888755 358999999999998875422 111 0 011111111 11122
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+..++|+|++++.++........ |+++++.+|
T Consensus 219 ~r~~~pedvA~~v~~L~s~~a~~it--G~~i~vdGG 252 (280)
T 3tox_A 219 KRIARPEEIAEAALYLASDGASFVT--GAALLADGG 252 (280)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCccccCCc--CcEEEECCC
Confidence 3578899999999998875433222 889999998
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-18 Score=164.53 Aligned_cols=230 Identities=15% Similarity=0.130 Sum_probs=148.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+... ..+.+.++ +.... ..++.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~--~~~~~~~~---------~~~~~--------~~~~~~ 59 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGA---DIVLNGFGDAA--EIEKVRAG---------LAAQH--------GVKVLY 59 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEECCSCHH--HHHHHHHH---------HHHHH--------TSCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC---EEEEEeCCcch--HHHHHHHH---------HHhcc--------CCcEEE
Confidence 4689999999999999999999999996 45788886421 01111111 11110 246888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 60 ~~~D~~-------~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 132 (260)
T 1x1t_A 60 DGADLS-------KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132 (260)
T ss_dssp ECCCTT-------SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999 4444444443 79999999997542 2457889999999999999887542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 133 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 150 (260)
T 1x1t_A 133 GFGRIINIASAHGLVAS--------------------------------------------------------------A 150 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCCEEEEECcHHhCcCC--------------------------------------------------------------C
Confidence 45799999997554221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCC-ccccCcCc--hHHHHHhccCceeeEEecCCCc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFP-GWAEGIRT--IDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~-gw~~~~~~--~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
....|+.||+..|.+.+.+ ..++++++++|+.|.++...... .+... .+ .......+. .....
T Consensus 151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~p 221 (260)
T 1x1t_A 151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK-NGVDQETAARELL--------SEKQP 221 (260)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CH--------HHHCT
T ss_pred CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccc-cCCchHHHHHHHh--------hccCC
Confidence 3468999999999888754 35899999999999887542210 00000 00 000000000 00011
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+..++|+|++++.++....... . ++++++.++
T Consensus 222 ~~~~~~p~dva~~~~~l~s~~~~~~-t-G~~~~vdgG 256 (260)
T 1x1t_A 222 SLQFVTPEQLGGTAVFLASDAAAQI-T-GTTVSVDGG 256 (260)
T ss_dssp TCCCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHhChhhcCC-C-CCEEEECCC
Confidence 2357899999999999886433222 2 789999887
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=164.13 Aligned_cols=216 Identities=14% Similarity=0.120 Sum_probs=150.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+. ++ +..++..
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 59 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGA---KVIGTATSESG---AQAIS-------------DY--------LGDNGKG 59 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHH-------------HH--------HGGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------hcccceE
Confidence 5789999999999999999999999996 55788876322 11111 11 1245788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 60 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 132 (248)
T 3op4_A 60 MALNVT-------NPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK 132 (248)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEeCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 999999 4444445544 79999999997642 2567889999999999999987542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 133 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 150 (248)
T 3op4_A 133 RQGRIINVGSVVGTMGN--------------------------------------------------------------A 150 (248)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------------T
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------------C
Confidence 44689999996543211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++..++|+.|..+...... ......... ......
T Consensus 151 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~---------~~p~~r 212 (248)
T 3op4_A 151 GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN---------DEQRTATLA---------QVPAGR 212 (248)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC---------HHHHHHHHH---------TCTTCS
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC---------HHHHHHHHh---------cCCCCC
Confidence 3468999999887777654 45899999999998776543211 011111111 112235
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++........ |+++++.++
T Consensus 213 ~~~p~dva~~v~~L~s~~~~~it--G~~i~vdgG 244 (248)
T 3op4_A 213 LGDPREIASAVAFLASPEAAYIT--GETLHVNGG 244 (248)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHcCCccCCcc--CcEEEECCC
Confidence 78899999999988864333222 889999887
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=165.94 Aligned_cols=220 Identities=15% Similarity=0.157 Sum_probs=149.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+|+++||||+|+||++++++|++.|+ +|+++.|+... ..+.+.+ .. + ....++.++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~---~v~~~~~~~~~--~~~~~~~-~~---------~--------~~~~~~~~~ 62 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGY---SVTVTYHSDTT--AMETMKE-TY---------K--------DVEERLQFV 62 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHH-HT---------G--------GGGGGEEEE
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCC---EEEEEcCCChH--HHHHHHH-HH---------H--------hcCCceEEE
Confidence 468999999999999999999999996 45777675422 1122211 10 0 012578999
Q ss_pred ecCCCCCCCCCCchhhHHHhcc-------CccEEEEccccc--C---c----chhHHHHHHHhHHHHHHHHHHH----Hh
Q 037479 91 PGDITREDLGVKDSNLREEMWN-------KLDVVINLAATT--N---F----DERYDVALDLNTFGAKHVLNFS----KK 150 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~--~---~----~~~~~~~~~~Nv~gt~~ll~~a----~~ 150 (492)
.+|++ +.+..+.+++ ++|+|||+||.. . + .+.++..+++|+.|+.++++++ ++
T Consensus 63 ~~Dl~-------~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 135 (264)
T 3i4f_A 63 QADVT-------KKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK 135 (264)
T ss_dssp ECCTT-------SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EecCC-------CHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 99999 4444445544 799999999932 1 1 2457788999999999999988 33
Q ss_pred cccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 151 CAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 151 ~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
. +..++|++||..+.+...
T Consensus 136 ~-~~g~iv~iss~~~~~~~~------------------------------------------------------------ 154 (264)
T 3i4f_A 136 Q-NFGRIINYGFQGADSAPG------------------------------------------------------------ 154 (264)
T ss_dssp H-TCEEEEEECCTTGGGCCC------------------------------------------------------------
T ss_pred c-CCCeEEEEeechhcccCC------------------------------------------------------------
Confidence 3 457899999864432211
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
......|+.||+..+.+.+.+ ..++++.+++|+.|.++...... ........ .....
T Consensus 155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~---------~~~p~ 216 (264)
T 3i4f_A 155 WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI---------QEARQLKE---------HNTPI 216 (264)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH---------HHHHHC----------------
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc---------HHHHHHHh---------hcCCC
Confidence 023468999999999888755 35899999999999987653211 11111111 11112
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+..++|+|++++.++........ |+++++.+|
T Consensus 217 ~r~~~~~dva~~v~~l~s~~~~~it--G~~i~vdGG 250 (264)
T 3i4f_A 217 GRSGTGEDIARTISFLCEDDSDMIT--GTIIEVTGA 250 (264)
T ss_dssp -CCCCHHHHHHHHHHHHSGGGTTCC--SCEEEESCS
T ss_pred CCCcCHHHHHHHHHHHcCcccCCCC--CcEEEEcCc
Confidence 2467899999999998875433222 899999988
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-18 Score=164.33 Aligned_cols=239 Identities=15% Similarity=0.148 Sum_probs=155.5
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC------HHHHHHHHhhcChhhHHHHHhcCCchhhh
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS------ATVRFHNEIIGKDLFRVLKEKNGTHLNAL 82 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~------~~~r~~~~~~~~~~f~~l~~~~~~~~~~~ 82 (492)
-+++|++|||||+|+||++++++|++.|+ +|+++.|+..... ..+++.. . ...+..
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~-~-----~~~~~~--------- 71 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGA---DIIAVDLCDQIASVPYPLATPEELAA-T-----VKLVED--------- 71 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCSSCCCCHHHHHH-H-----HHHHHH---------
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEecccccccccccccchHHHHH-H-----HHHHHh---------
Confidence 36899999999999999999999999996 4588888632111 1122221 0 001111
Q ss_pred ccCceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcc
Q 037479 83 ISEKITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCA 152 (492)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (492)
...++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 72 ~~~~~~~~~~D~~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 144 (278)
T 3sx2_A 72 IGSRIVARQADVR-------DRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTL 144 (278)
T ss_dssp HTCCEEEEECCTT-------CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCeEEEEeCCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 1367899999999 5554545544 79999999997643 35678899999999999999875531
Q ss_pred ----cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 153 ----KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 153 ----~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
.-.++|++||......... ..
T Consensus 145 ~~~~~~g~iv~isS~~~~~~~~~-----~~-------------------------------------------------- 169 (278)
T 3sx2_A 145 VKQGTGGSIVLISSSAGLAGVGS-----AD-------------------------------------------------- 169 (278)
T ss_dssp HHHCSCEEEEEECCGGGTSCCCC-----SS--------------------------------------------------
T ss_pred HhCCCCcEEEEEccHHhcCCCcc-----CC--------------------------------------------------
Confidence 2358999999654422100 00
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc-CceeeEEecCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG-KGRLTCFLGDV 302 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~-~g~~~~~~~~~ 302 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|.++..... .....+.... ........++.
T Consensus 170 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 238 (278)
T 3sx2_A 170 ---PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--------FTREWLAKMAAATDTPGAMGNA 238 (278)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--------HHHHHHHHHHHHCC--CTTSCS
T ss_pred ---CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--------hHHHHHhhccchhhhhhhhhhh
Confidence 01247999999999888755 4589999999999988754310 0001111000 00000011122
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.. ..++.++|+|++++.++........ |+++++.+|
T Consensus 239 ~p-~~~~~p~dvA~~v~~l~s~~~~~it--G~~i~vdGG 274 (278)
T 3sx2_A 239 MP-VEVLAPEDVANAVAWLVSDQARYIT--GVTLPVDAG 274 (278)
T ss_dssp SS-CSSBCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred cC-cCcCCHHHHHHHHHHHhCccccccc--CCEEeECCC
Confidence 22 5788999999999998864333222 889999887
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-18 Score=166.92 Aligned_cols=220 Identities=16% Similarity=0.185 Sum_probs=151.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|++..|+.... ..+.+.+ +.++ ...++.+
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~-~~~~~~~----------~~~~--------~~~~~~~ 104 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGA---DVAINYLPAEEE-DAQQVKA----------LIEE--------CGRKAVL 104 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCGGGHH-HHHHHHH----------HHHH--------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcchh-HHHHHHH----------HHHH--------cCCcEEE
Confidence 5789999999999999999999999996 457777753211 1111111 0011 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA-K 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~ 153 (492)
+.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++.... .
T Consensus 105 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 177 (294)
T 3r3s_A 105 LPGDLS-------DESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK 177 (294)
T ss_dssp CCCCTT-------SHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence 999999 444444443 379999999997431 24578899999999999999997642 1
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||...+... ..
T Consensus 178 ~g~Iv~isS~~~~~~~--------------------------------------------------------------~~ 195 (294)
T 3r3s_A 178 GASIITTSSIQAYQPS--------------------------------------------------------------PH 195 (294)
T ss_dssp TCEEEEECCGGGTSCC--------------------------------------------------------------TT
T ss_pred CCEEEEECChhhccCC--------------------------------------------------------------CC
Confidence 2389999997655321 13
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCC---CCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEP---FPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p---~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
...|+.||+..|.+.+.+ ..|+++.+++|+.|.++.... .+.+.. .+ ......
T Consensus 196 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~----------~~---------~~~~p~ 256 (294)
T 3r3s_A 196 LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP----------QF---------GQQTPM 256 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGST----------TT---------TTTSTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHH----------HH---------HhcCCC
Confidence 467999999999888755 358999999999998864210 011100 00 111222
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+..++|+|++++.++........ |+++++.+|
T Consensus 257 ~r~~~p~dvA~~v~~L~s~~~~~it--G~~i~vdGG 290 (294)
T 3r3s_A 257 KRAGQPAELAPVYVYLASQESSYVT--AEVHGVCGG 290 (294)
T ss_dssp SSCBCGGGGHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCccccCCC--CCEEEECCC
Confidence 3467889999999998874433222 889999987
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.6e-18 Score=160.98 Aligned_cols=221 Identities=16% Similarity=0.161 Sum_probs=149.2
Q ss_pred cCCCEEEEeCCcch-hhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGF-LAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGf-lG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++|+||||||||+ ||++++++|++.|+ +|+++.|+... .+.+.+ .+++. ...++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~l~~~--------~~~~~~ 76 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA---DVVISDYHERR---LGETRD---------QLADL--------GLGRVE 76 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHTT--------CSSCEE
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC---EEEEecCCHHH---HHHHHH---------HHHhc--------CCCceE
Confidence 67899999999985 99999999999996 56888886432 111111 11111 125789
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 77 ~~~~Dl~-------~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 149 (266)
T 3o38_A 77 AVVCDVT-------STEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRG 149 (266)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred EEEeCCC-------CHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 9999999 4444444443 68999999997532 2457888999999999999988654
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
++..++|++||...+...
T Consensus 150 ~~~~~~iv~~sS~~~~~~~------------------------------------------------------------- 168 (266)
T 3o38_A 150 VDHGGVIVNNASVLGWRAQ------------------------------------------------------------- 168 (266)
T ss_dssp SSCCEEEEEECCGGGTCCC-------------------------------------------------------------
T ss_pred cCCCeEEEEeCCHHHcCCC-------------------------------------------------------------
Confidence 134579999986544221
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..|.+.+.+ ..++++.+++|+.|.++....... .... .........
T Consensus 169 -~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~---------~~~~~~~~~ 230 (266)
T 3o38_A 169 -HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--------SELL---------DRLASDEAF 230 (266)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----------------------------------CCTT
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--------HHHH---------HHHHhcCCc
Confidence 23468999999999988755 358999999999988765421110 0000 011122233
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+.+++|+|++++.++........ |+++++.+|
T Consensus 231 ~r~~~~~dva~~i~~l~s~~~~~~t--G~~i~vdgG 264 (266)
T 3o38_A 231 GRAAEPWEVAATIAFLASDYSSYMT--GEVVSVSSQ 264 (266)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCC--SCEEEESSC
T ss_pred CCCCCHHHHHHHHHHHcCccccCcc--CCEEEEcCC
Confidence 4678999999999998875333222 889999887
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-18 Score=161.62 Aligned_cols=217 Identities=12% Similarity=0.158 Sum_probs=144.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... ++.. .+++ ...++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~-----~~~~---------~~~~---------~~~~~~~ 58 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGA---DIAIADLVPAP-----EAEA---------AIRN---------LGRRVLT 58 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCH-----HHHH---------HHHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCchh-----HHHH---------HHHh---------cCCcEEE
Confidence 6789999999999999999999999996 56888886521 1110 0111 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK----KC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~ 151 (492)
+.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++. +.
T Consensus 59 ~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (249)
T 2ew8_A 59 VKCDVS-------QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN 131 (249)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeecC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 999999 444444443 479999999997532 24577889999999888888753 33
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||...+...
T Consensus 132 -~~g~iv~isS~~~~~~~-------------------------------------------------------------- 148 (249)
T 2ew8_A 132 -GWGRIINLTSTTYWLKI-------------------------------------------------------------- 148 (249)
T ss_dssp -TCEEEEEECCGGGGSCC--------------------------------------------------------------
T ss_pred -CCeEEEEEcchhhccCC--------------------------------------------------------------
Confidence 45799999997654321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCC-CCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKE-PFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~-p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..|.+.+.+ ..++++++++|+.|.++... ... .. .......+. ...
T Consensus 149 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~---~~~~~~~~~-----------~~~ 211 (249)
T 2ew8_A 149 EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL---SA---MFDVLPNML-----------QAI 211 (249)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------------CTT-----------SSS
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccc---cc---hhhHHHHhh-----------Ccc
Confidence 13468999999999988765 35899999999999876542 110 00 000000000 111
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+..++|+|++++.++........ ++++++.++
T Consensus 212 ~~~~~p~dva~~~~~l~s~~~~~~t--G~~~~vdGG 245 (249)
T 2ew8_A 212 PRLQVPLDLTGAAAFLASDDASFIT--GQTLAVDGG 245 (249)
T ss_dssp CSCCCTHHHHHHHHHHTSGGGTTCC--SCEEEESSS
T ss_pred CCCCCHHHHHHHHHHHcCcccCCCC--CcEEEECCC
Confidence 2478899999999998864332222 789999887
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=8.5e-19 Score=165.63 Aligned_cols=221 Identities=14% Similarity=0.105 Sum_probs=149.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+.. ++. ++. + ..++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~-~~~----------~---------~~~~~~ 54 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGA---KVIATDINES------KLQ-ELE----------K---------YPGIQT 54 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHG-GGG----------G---------STTEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH------HHH-HHH----------h---------ccCceE
Confidence 5789999999999999999999999996 5688888532 111 000 0 136788
Q ss_pred EecCCCCCCCCCCchhhHHHh---ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cccee
Q 037479 90 VPGDITREDLGVKDSNLREEM---WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AKLIV 156 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~---~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~ 156 (492)
+.+|+++ .+..+.+ +.++|+|||+||.... .+.++..+++|+.|+.++++++... .+..+
T Consensus 55 ~~~D~~~-------~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~ 127 (246)
T 2ag5_A 55 RVLDVTK-------KKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGN 127 (246)
T ss_dssp EECCTTC-------HHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEeeCCC-------HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 9999994 4444343 3579999999997643 2457788999999999999987542 14579
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|++||...+.... .....
T Consensus 128 iv~isS~~~~~~~~-------------------------------------------------------------~~~~~ 146 (246)
T 2ag5_A 128 IINMSSVASSVKGV-------------------------------------------------------------VNRCV 146 (246)
T ss_dssp EEEECCSBTTTBCC-------------------------------------------------------------TTBHH
T ss_pred EEEEechHhCcCCC-------------------------------------------------------------CCCcc
Confidence 99999965442210 12358
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
|+.||+..|.+.+.+ ..+++++++||+.|.++.... +.............+... .....++.+
T Consensus 147 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 214 (246)
T 2ag5_A 147 YSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARNDFLKR---------QKTGRFATA 214 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHHHHHT---------CTTSSCEEH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhh---hhhcccCcHHHHHHHHhc---------CCCCCCCCH
Confidence 999999999988765 348999999999999864311 000000011111111110 011247899
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|+|++++.++........ ++++++.++
T Consensus 215 ~dvA~~v~~l~s~~~~~~t--G~~i~vdgG 242 (246)
T 2ag5_A 215 EEIAMLCVYLASDESAYVT--GNPVIIDGG 242 (246)
T ss_dssp HHHHHHHHHHHSGGGTTCC--SCEEEECTT
T ss_pred HHHHHHHHHHhCccccCCC--CCEEEECCC
Confidence 9999999998864332222 789998876
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=4.4e-18 Score=163.28 Aligned_cols=225 Identities=16% Similarity=0.151 Sum_probs=148.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... .+.+. ..+++. ..++..
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~---------~~~~~~ 74 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA---RVYTCSRNEKE---LDECL---------EIWREK---------GLNVEG 74 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCceEE
Confidence 5789999999999999999999999996 56888886421 11111 111111 256889
Q ss_pred EecCCCCCCCCCCchhhHHHhc--------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW--------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~--------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 75 ~~~D~~-------~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~ 147 (273)
T 1ae1_A 75 SVCDLL-------SRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA 147 (273)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999999 444444444 579999999997532 2457888999999999999988432
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||...+...
T Consensus 148 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 165 (273)
T 1ae1_A 148 SQNGNVIFLSSIAGFSAL-------------------------------------------------------------- 165 (273)
T ss_dssp HTSEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred cCCcEEEEEcCHhhcCCC--------------------------------------------------------------
Confidence 145799999997655321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.+ ..++++++++|+.|.++...... ............+... ....
T Consensus 166 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~---------~p~~ 233 (273)
T 1ae1_A 166 PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI---KKNPHQKEEIDNFIVK---------TPMG 233 (273)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHH---------STTC
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhh---hcccCcHHHHHHHHhc---------CCCC
Confidence 13468999999999888755 35899999999999987542211 0000001111111100 0112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+..++|+|++++.++........ ++++++.++
T Consensus 234 r~~~p~dvA~~v~~l~s~~~~~~t--G~~i~vdGG 266 (273)
T 1ae1_A 234 RAGKPQEVSALIAFLCFPAASYIT--GQIIWADGG 266 (273)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCccccCcC--CCEEEECCC
Confidence 468899999999988864332222 789999887
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.4e-18 Score=165.57 Aligned_cols=220 Identities=15% Similarity=0.067 Sum_probs=151.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|. +|+++.|+.... +.+.+++ ++. ...++.+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~---~~~~~~l---------~~~--------~~~~~~~ 95 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA---NVAVAARSPREL---SSVTAEL---------GEL--------GAGNVIG 95 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSGGGG---HHHHHHH---------TTS--------SSSCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHHHHH---------Hhh--------CCCcEEE
Confidence 5789999999999999999999999996 568888875432 1111111 100 0157899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----hc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK----KC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~~ 151 (492)
+.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++. +.
T Consensus 96 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 168 (293)
T 3rih_A 96 VRLDVS-------DPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS 168 (293)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH
T ss_pred EEEeCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 999999 444443443 368999999997532 25678899999999999999874 32
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||....... +
T Consensus 169 -~~g~iV~isS~~~~~~~--------~----------------------------------------------------- 186 (293)
T 3rih_A 169 -GRGRVILTSSITGPVTG--------Y----------------------------------------------------- 186 (293)
T ss_dssp -SSCEEEEECCSBTTTBB--------C-----------------------------------------------------
T ss_pred -CCCEEEEEeChhhccCC--------C-----------------------------------------------------
Confidence 45789999996532110 0
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..|+++.+++|+.|.++...... ......+... ....
T Consensus 187 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~---------~p~~ 248 (293)
T 3rih_A 187 PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG---------EEYISGMARS---------IPMG 248 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC---------HHHHHHHHTT---------STTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc---------HHHHHHHHhc---------CCCC
Confidence 23468999999999888754 35899999999999886432110 1122221111 1112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++........ |+++++.+|
T Consensus 249 r~~~p~dvA~~v~fL~s~~a~~it--G~~i~vdGG 281 (293)
T 3rih_A 249 MLGSPVDIGHLAAFLATDEAGYIT--GQAIVVDGG 281 (293)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCccccCCC--CCEEEECCC
Confidence 356789999999998874333222 889999988
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=166.34 Aligned_cols=221 Identities=13% Similarity=0.068 Sum_probs=149.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+. ++ +..++.+
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 79 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGC---HVLCADIDGDA---ADAAA-------------TK--------IGCGAAA 79 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHH-------------HH--------HCSSCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------cCCcceE
Confidence 6789999999999999999999999996 56888886321 11111 11 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 80 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 152 (277)
T 3gvc_A 80 CRVDVS-------DEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER 152 (277)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999 4444444443 78999999997643 2567889999999999999987652 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||....... .
T Consensus 153 ~~g~Iv~isS~~~~~~~--------------------------------------------------------------~ 170 (277)
T 3gvc_A 153 GGGAIVNLSSLAGQVAV--------------------------------------------------------------G 170 (277)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCcEEEEEcchhhccCC--------------------------------------------------------------C
Confidence 34589999996543211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCcccc-Cc-CchHHHHHhccCceeeEEecCCCcc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAE-GI-RTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~-~~-~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|.++.......... .. ......... ...
T Consensus 171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~ 237 (277)
T 3gvc_A 171 GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIA-------------RLQ 237 (277)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHH-------------HHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhh-------------ccc
Confidence 3468999999999888754 358999999999998764311000000 00 000000000 011
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+..++|+|++++.++........ |+++++.+|
T Consensus 238 ~r~~~pedvA~~v~~L~s~~a~~it--G~~i~vdGG 271 (277)
T 3gvc_A 238 GRMAAPEEMAGIVVFLLSDDASMIT--GTTQIADGG 271 (277)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred cCCCCHHHHHHHHHHHcCCccCCcc--CcEEEECCc
Confidence 2467899999999998875433222 889999987
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.6e-18 Score=160.78 Aligned_cols=210 Identities=12% Similarity=0.107 Sum_probs=142.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|++ |+++.|+.... .+.+. ..++.+
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~------------------------~~~~~~ 75 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHR---VIISYRTEHAS--VTELR------------------------QAGAVA 75 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCC---EEEEESSCCHH--HHHHH------------------------HHTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCChHHH--HHHHH------------------------hcCCeE
Confidence 56899999999999999999999999974 58888875421 11111 124788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 76 ~~~Dv~-------~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~ 148 (260)
T 3gem_A 76 LYGDFS-------CETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE 148 (260)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS
T ss_pred EECCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999 4444444443 69999999997532 1456788999999999999988643 13
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||...+... ..
T Consensus 149 ~g~iv~isS~~~~~~~--------------------------------------------------------------~~ 166 (260)
T 3gem_A 149 VADIVHISDDVTRKGS--------------------------------------------------------------SK 166 (260)
T ss_dssp SCEEEEECCGGGGTCC--------------------------------------------------------------SS
T ss_pred CcEEEEECChhhcCCC--------------------------------------------------------------CC
Confidence 4689999996544221 23
Q ss_pred CchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 234 PNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
...|+.||+..+.+.+.+ .+++++.+++|+.|.++.... +.+ ...+.. .....-+.
T Consensus 167 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~-~~~----------~~~~~~---------~~p~~r~~ 226 (260)
T 3gem_A 167 HIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD-AAY----------RANALA---------KSALGIEP 226 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-----------------------------------CCSCCCC
T ss_pred cHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC-HHH----------HHHHHh---------cCCCCCCC
Confidence 468999999999887755 457999999999987654311 100 000000 01112345
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++|+|++++.++. ..... |+++++.+|
T Consensus 227 ~~edva~~v~~L~~-~~~it---G~~i~vdGG 254 (260)
T 3gem_A 227 GAEVIYQSLRYLLD-STYVT---GTTLTVNGG 254 (260)
T ss_dssp CTHHHHHHHHHHHH-CSSCC---SCEEEESTT
T ss_pred CHHHHHHHHHHHhh-CCCCC---CCEEEECCC
Confidence 68999999999884 22222 889999988
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-18 Score=165.34 Aligned_cols=221 Identities=13% Similarity=0.164 Sum_probs=151.4
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
...+++|+||||||+|+||++++++|++.|. +|+++.|+.... ...
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~-------------------------------~~~ 54 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGA---KVVSVSLDEKSD-------------------------------VNV 54 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCC--C-------------------------------TTS
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCchhc-------------------------------cCc
Confidence 4567899999999999999999999999996 568888865432 134
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC- 151 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (492)
+..+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 55 ~~~~~~Dv~-------~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 127 (269)
T 3vtz_A 55 SDHFKIDVT-------NEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVM 127 (269)
T ss_dssp SEEEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eeEEEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 577899999 4444444443 79999999997543 2456788999999999999987652
Q ss_pred --ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 152 --AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 152 --~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
.+..++|++||...+...
T Consensus 128 ~~~~~g~iv~isS~~~~~~~------------------------------------------------------------ 147 (269)
T 3vtz_A 128 LAIGHGSIINIASVQSYAAT------------------------------------------------------------ 147 (269)
T ss_dssp HHHTCEEEEEECCGGGTSBC------------------------------------------------------------
T ss_pred HHcCCCEEEEECchhhccCC------------------------------------------------------------
Confidence 145689999997655321
Q ss_pred cCCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccc--cCcCchHHHHHhccCceeeEEecCCC
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWA--EGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~--~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..|.+.+.+ .+++++.+++|+.|.++......... ............+.. ..
T Consensus 148 --~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 216 (269)
T 3vtz_A 148 --KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR---------QH 216 (269)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH---------HS
T ss_pred --CCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh---------cC
Confidence 23468999999999988755 34899999999999876421100000 000000111111111 11
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+..++|+|++++.++........ |+++++.+|
T Consensus 217 p~~r~~~pedvA~~v~~L~s~~~~~it--G~~i~vdGG 252 (269)
T 3vtz_A 217 PMGRIGRPEEVAEVVAFLASDRSSFIT--GACLTVDGG 252 (269)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCCcCHHHHHHHHHHHhCCccCCCc--CcEEEECCC
Confidence 223577899999999998875433222 889999988
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.2e-18 Score=160.22 Aligned_cols=220 Identities=15% Similarity=0.167 Sum_probs=146.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||||+||++++++|++.|+ +|+++.|+... ..+.+. +.++.. ..++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~--~~~~~~---------~~~~~~---------~~~~~~ 58 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA---NVVVNYAGNEQ--KANEVV---------DEIKKL---------GSDAIA 58 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHH---------HHHHhc---------CCcEEE
Confidence 4689999999999999999999999996 55788873211 111111 111111 256888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 59 ~~~D~~-------~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (246)
T 2uvd_A 59 VRADVA-------NAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ 131 (246)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 999999 4444445444 79999999997532 2457788999999988777766432 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 149 (246)
T 2uvd_A 132 RHGRIVNIASVVGVTGN--------------------------------------------------------------P 149 (246)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------------T
T ss_pred CCcEEEEECCHHhcCCC--------------------------------------------------------------C
Confidence 45799999996543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++++++|+.|.++.....+ . . ....+... .....
T Consensus 150 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~---~---~~~~~~~~---------~p~~~ 211 (246)
T 2uvd_A 150 GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD---E---N---IKAEMLKL---------IPAAQ 211 (246)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC---T---T---HHHHHHHT---------CTTCS
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC---H---H---HHHHHHhc---------CCCCC
Confidence 2357999999888876644 45899999999999876542211 0 0 11111000 01124
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+|++++.++........ ++++++.++
T Consensus 212 ~~~~~dvA~~~~~l~s~~~~~~t--G~~~~vdgG 243 (246)
T 2uvd_A 212 FGEAQDIANAVTFFASDQSKYIT--GQTLNVDGG 243 (246)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHcCchhcCCC--CCEEEECcC
Confidence 78999999999998864332222 789999876
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.7e-18 Score=162.40 Aligned_cols=220 Identities=19% Similarity=0.174 Sum_probs=149.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE-EecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLL-LRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l-vR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++|++|||||+|+||++++++|++.|.+ |+++ .|+... .+.+.+++ .+ ...++.+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~---vv~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 58 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYN---IVINYARSKKA---ALETAEEI---------EK---------LGVKVLV 58 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSCHHH---HHHHHHHH---------HT---------TTCCEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 5899999999999999999999999964 4554 554321 11211111 11 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 59 ~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 131 (258)
T 3oid_A 59 VKANVG-------QPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN 131 (258)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999 4444444443 67999999996432 2457788999999999999988542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 149 (258)
T 3oid_A 132 GGGHIVSISSLGSIRYL--------------------------------------------------------------E 149 (258)
T ss_dssp TCEEEEEEEEGGGTSBC--------------------------------------------------------------T
T ss_pred CCcEEEEECchhhCCCC--------------------------------------------------------------C
Confidence 34689999996544211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|.++.....+ ........+..+ .....
T Consensus 150 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~p~~r 213 (258)
T 3oid_A 150 NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP-------NREDLLEDARQN---------TPAGR 213 (258)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT-------THHHHHHHHHHH---------CTTSS
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc-------cCHHHHHHHHhc---------CCCCC
Confidence 3468999999999988765 34899999999999876543211 111122111111 11235
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++....... . |+++++.+|
T Consensus 214 ~~~~~dva~~v~~L~s~~~~~i-t-G~~i~vdGG 245 (258)
T 3oid_A 214 MVEIKDMVDTVEFLVSSKADMI-R-GQTIIVDGG 245 (258)
T ss_dssp CBCHHHHHHHHHHHTSSTTTTC-C-SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCcccCCc-c-CCEEEECCC
Confidence 7889999999999886433222 2 889999988
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.6e-18 Score=162.37 Aligned_cols=223 Identities=13% Similarity=0.121 Sum_probs=150.3
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.+++.. ...++.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~~~~------------------~~~~~~ 58 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA---RVVITGRTKEK---LEEAKLEIEQ------------------FPGQIL 58 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHHCC------------------STTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHHHh------------------cCCcEE
Confidence 36789999999999999999999999996 56888886432 1222111100 125789
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 59 ~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~ 131 (257)
T 3imf_A 59 TVQMDVR-------NTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIE 131 (257)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 9999999 4444444443 78999999996432 2457889999999999999988432
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..++|++||.......
T Consensus 132 ~~~~g~iv~isS~~~~~~~------------------------------------------------------------- 150 (257)
T 3imf_A 132 KGIKGNIINMVATYAWDAG------------------------------------------------------------- 150 (257)
T ss_dssp HTCCCEEEEECCGGGGSCC-------------------------------------------------------------
T ss_pred hCCCcEEEEECchhhccCC-------------------------------------------------------------
Confidence 134689999996544221
Q ss_pred CCCCchHHHHHHHHHHHHHHh------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++..... .|... .....+. ....
T Consensus 151 -~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~-~~~~~-~~~~~~~-------------~~~p 214 (257)
T 3imf_A 151 -PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK-LWISE-EMAKRTI-------------QSVP 214 (257)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CCSHHHH-------------TTST
T ss_pred -CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhh-cccCH-HHHHHHH-------------hcCC
Confidence 23457999999988887644 2389999999999987653211 11110 0001111 1111
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+..++|+|++++.++........ |+++++.++
T Consensus 215 ~~r~~~pedvA~~v~~L~s~~~~~it--G~~i~vdGG 249 (257)
T 3imf_A 215 LGRLGTPEEIAGLAYYLCSDEAAYIN--GTCMTMDGG 249 (257)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHcCchhcCcc--CCEEEECCC
Confidence 23578899999999998874433222 889999988
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.1e-18 Score=163.01 Aligned_cols=220 Identities=14% Similarity=0.108 Sum_probs=153.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.+++ .. ...++.+
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 85 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA---QVAVAARHSDA---LQVVADEI---------AG---------VGGKALP 85 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSGGG---GHHHHHHH---------HH---------TTCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hh---------cCCeEEE
Confidence 5789999999999999999999999996 56888886433 22222111 11 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 86 ~~~Dl~-------d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 158 (276)
T 3r1i_A 86 IRCDVT-------QPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQ 158 (276)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999 5554545554 79999999997643 24577889999999999999876531
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ -.++|++||...+.... .
T Consensus 159 ~~~g~iv~isS~~~~~~~~------------------------------------------------------------~ 178 (276)
T 3r1i_A 159 GLGGTIITTASMSGHIINI------------------------------------------------------------P 178 (276)
T ss_dssp TSCEEEEEECCGGGTSCCC------------------------------------------------------------S
T ss_pred CCCcEEEEECchHhcccCC------------------------------------------------------------C
Confidence 1 25799999865432110 0
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|..+.....+. ....+... ....
T Consensus 179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~----------~~~~~~~~---------~p~~ 239 (276)
T 3r1i_A 179 QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD----------YHALWEPK---------IPLG 239 (276)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG----------GHHHHGGG---------STTS
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH----------HHHHHHhc---------CCCC
Confidence 13467999999999988765 358999999999998766533211 11111111 1122
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+..++|+|++++.++........ |+++++.++
T Consensus 240 r~~~pedvA~~v~fL~s~~~~~it--G~~i~vdGG 272 (276)
T 3r1i_A 240 RMGRPEELTGLYLYLASAASSYMT--GSDIVIDGG 272 (276)
T ss_dssp SCBCGGGSHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcCccccCcc--CcEEEECcC
Confidence 467899999999998874433222 889999887
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=166.07 Aligned_cols=216 Identities=15% Similarity=0.173 Sum_probs=145.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|. +|+++.|+.. ++. ++ .++ ...++.+
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~------~~~-~~---------~~~--------~~~~~~~ 77 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGA---IVGLHGTRED------KLK-EI---------AAD--------LGKDVFV 77 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH-HH---------HHH--------HCSSEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHH-HH---------HHH--------hCCceEE
Confidence 5789999999999999999999999996 5577777532 111 11 111 1357899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++.+.+... .
T Consensus 78 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 150 (266)
T 3grp_A 78 FSANLS-------DRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR 150 (266)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeecC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999 5444445443 79999999997542 2567888999999977777765432 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 151 ~~g~Iv~isS~~~~~~~--------------------------------------------------------------~ 168 (266)
T 3grp_A 151 RYGRIINITSIVGVVGN--------------------------------------------------------------P 168 (266)
T ss_dssp TCEEEEEECCC---------------------------------------------------------------------
T ss_pred CCcEEEEECCHHHcCCC--------------------------------------------------------------C
Confidence 45689999996544211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|.++...... ......+.. ......
T Consensus 169 ~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~---------~~p~~r 230 (266)
T 3grp_A 169 GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN---------EKQKEAIMA---------MIPMKR 230 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC---------HHHHHHHHT---------TCTTCS
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC---------HHHHHHHHh---------cCCCCC
Confidence 2357999999888777654 35899999999999876432111 111111111 112235
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++........ |+++++.+|
T Consensus 231 ~~~~edvA~~v~~L~s~~~~~it--G~~i~vdGG 262 (266)
T 3grp_A 231 MGIGEEIAFATVYLASDEAAYLT--GQTLHINGG 262 (266)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCccccCcc--CCEEEECCC
Confidence 67899999999998874433222 889999887
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.3e-18 Score=163.81 Aligned_cols=232 Identities=15% Similarity=0.109 Sum_probs=156.2
Q ss_pred HhhcCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 7 LEFLENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 7 ~~~~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
...+++|+||||||+ |+||++++++|++.|. +|+++.|+.+.. +.+. .+.++ .
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~---~V~~~~r~~~~~---~~~~----------~~~~~---------~ 63 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGA---ELAFTYVGDRFK---DRIT----------EFAAE---------F 63 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGGH---HHHH----------HHHHH---------T
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC---CEEEEecchhhH---HHHH----------HHHHH---------c
Confidence 356789999999999 9999999999999996 568888874322 2221 11111 1
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc------------chhHHHHHHHhHHHHHHHH
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF------------DERYDVALDLNTFGAKHVL 145 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll 145 (492)
.++.++.+|++ +.+..+.+++ ++|++||+||.... .+.+...+++|+.|+.+++
T Consensus 64 ~~~~~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 136 (271)
T 3ek2_A 64 GSELVFPCDVA-------DDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALA 136 (271)
T ss_dssp TCCCEEECCTT-------CHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHH
T ss_pred CCcEEEECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHH
Confidence 34788999999 4444445543 68999999997532 2457788999999999999
Q ss_pred HHHHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhh
Q 037479 146 NFSKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLG 224 (492)
Q Consensus 146 ~~a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (492)
+++.... .-.++|++||...+...
T Consensus 137 ~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------- 161 (271)
T 3ek2_A 137 KAALPMLSDDASLLTLSYLGAERAI------------------------------------------------------- 161 (271)
T ss_dssp HHHGGGEEEEEEEEEEECGGGTSBC-------------------------------------------------------
T ss_pred HHHHHHhccCceEEEEeccccccCC-------------------------------------------------------
Confidence 9987642 23489999986544221
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEe
Q 037479 225 IKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFL 299 (492)
Q Consensus 225 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~ 299 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|..+...... ........+...
T Consensus 162 -------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~------ 221 (271)
T 3ek2_A 162 -------PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK-------SFGKILDFVESN------ 221 (271)
T ss_dssp -------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH-------HHHHHHHHHHHH------
T ss_pred -------CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc-------chHHHHHHHHhc------
Confidence 23468999999999888755 45899999999999876543211 111222111111
Q ss_pred cCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHH
Q 037479 300 GDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQ 352 (492)
Q Consensus 300 ~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~ 352 (492)
.....+..++|+|++++.++........ |+++++.+| ..++..++.
T Consensus 222 ---~~~~~~~~pedva~~i~~l~s~~~~~~t--G~~i~vdgG--~~~~~~~~~ 267 (271)
T 3ek2_A 222 ---SPLKRNVTIEQVGNAGAFLLSDLASGVT--AEVMHVDSG--FNAVVGGMA 267 (271)
T ss_dssp ---STTSSCCCHHHHHHHHHHHHSGGGTTCC--SEEEEESTT--GGGBCCCC-
T ss_pred ---CCcCCCCCHHHHHHHHHHHcCcccCCee--eeEEEECCC--eeeehhhhh
Confidence 1122467899999999998874333222 899999998 566665543
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.1e-18 Score=161.28 Aligned_cols=222 Identities=16% Similarity=0.194 Sum_probs=146.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|........+.+.+++ +. ...++.+
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~---------~~---------~~~~~~~ 67 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESV---NLVLHYHQAKDSDTANKLKDEL---------ED---------QGAKVAL 67 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSC---EEEEEESCGGGHHHHHHHHHHH---------HT---------TTCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecCccCHHHHHHHHHHH---------Hh---------cCCcEEE
Confidence 5789999999999999999999999996 5578877654433333332211 11 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-cc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-KL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~ 154 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.... +-
T Consensus 68 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 140 (262)
T 3ksu_A 68 YQSDLS-------NEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN 140 (262)
T ss_dssp EECCCC-------SHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC
Confidence 999999 5554545543 79999999997532 24577889999999999999988742 34
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... ...
T Consensus 141 g~iv~isS~~~~~~~--------------------------------------------------------------~~~ 158 (262)
T 3ksu_A 141 GHIITIATSLLAAYT--------------------------------------------------------------GFY 158 (262)
T ss_dssp EEEEEECCCHHHHHH--------------------------------------------------------------CCC
T ss_pred CEEEEEechhhccCC--------------------------------------------------------------CCC
Confidence 589999986544321 234
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+.+.+ ..++++..+.|+.|..+...... . ... ............+.
T Consensus 159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------~-~~~---------~~~~~~~~~~~r~~ 221 (262)
T 3ksu_A 159 STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE-------T-KES---------TAFHKSQAMGNQLT 221 (262)
T ss_dssp CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------------------CCCCSC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-------c-hHH---------HHHHHhcCcccCCC
Confidence 57999999999888755 35899999999988654321100 0 000 00011111223467
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+|+|++++.++.. .... . |+++++.++
T Consensus 222 ~pedvA~~v~~L~s~-~~~i-t-G~~i~vdGg 250 (262)
T 3ksu_A 222 KIEDIAPIIKFLTTD-GWWI-N-GQTIFANGG 250 (262)
T ss_dssp CGGGTHHHHHHHHTT-TTTC-C-SCEEEESTT
T ss_pred CHHHHHHHHHHHcCC-CCCc-c-CCEEEECCC
Confidence 899999999998874 3222 2 889999887
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-18 Score=165.26 Aligned_cols=218 Identities=15% Similarity=0.142 Sum_probs=149.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|. +|+++.|.... ..+.+.++ +.. ...++.+
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~---~V~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~~~ 82 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGA---KVAVNYASSAG--AADEVVAA---------IAA---------AGGEAFA 82 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCChH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 5789999999999999999999999996 45777774321 11111111 111 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 83 ~~~D~~-------d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 155 (269)
T 4dmm_A 83 VKADVS-------QESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ 155 (269)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 999999 5444445444 79999999997642 2567889999999999999987542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 156 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 173 (269)
T 4dmm_A 156 RSGRIINIASVVGEMGN--------------------------------------------------------------P 173 (269)
T ss_dssp TCCEEEEECCHHHHHCC--------------------------------------------------------------T
T ss_pred CCcEEEEECchhhcCCC--------------------------------------------------------------C
Confidence 34589999996543211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|.++..... .. ..... ......
T Consensus 174 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----------~~--~~~~~---------~~p~~r 232 (269)
T 4dmm_A 174 GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL----------AA--EKLLE---------VIPLGR 232 (269)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH----------HH--HHHGG---------GCTTSS
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc----------cH--HHHHh---------cCCCCC
Confidence 3468999999887776654 4589999999999987654210 00 11111 111235
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++.......-. |+++++.+|
T Consensus 233 ~~~~~dvA~~v~~l~s~~~~~~it-G~~i~vdGG 265 (269)
T 4dmm_A 233 YGEAAEVAGVVRFLAADPAAAYIT-GQVINIDGG 265 (269)
T ss_dssp CBCHHHHHHHHHHHHHCGGGGGCC-SCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCCcccCCCc-CCEEEECCC
Confidence 678999999999988752221112 889999887
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=166.24 Aligned_cols=231 Identities=18% Similarity=0.188 Sum_probs=153.7
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
...+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.+ .+++. ..+
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~---------~~~ 61 (264)
T 3ucx_A 6 GGLLTDKVVVISGVGPALGTTLARRCAEQGA---DLVLAARTVER---LEDVAK---------QVTDT---------GRR 61 (264)
T ss_dssp -CTTTTCEEEEESCCTTHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHT---------TCC
T ss_pred CCCcCCcEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCHHH---HHHHHH---------HHHhc---------CCc
Confidence 3567899999999999999999999999996 56888885321 122111 11111 257
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 62 ~~~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 134 (264)
T 3ucx_A 62 ALSVGTDIT-------DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPA 134 (264)
T ss_dssp EEEEECCTT-------CHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHH
T ss_pred EEEEEcCCC-------CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 899999999 4444444443 78999999987421 1557888999999999999987543
Q ss_pred c--cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 152 A--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 152 ~--~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
. +-.++|++||.......
T Consensus 135 ~~~~~g~iv~isS~~~~~~~------------------------------------------------------------ 154 (264)
T 3ucx_A 135 LEESKGAVVNVNSMVVRHSQ------------------------------------------------------------ 154 (264)
T ss_dssp HHHHTCEEEEECCGGGGCCC------------------------------------------------------------
T ss_pred HHHcCCEEEEECcchhccCC------------------------------------------------------------
Confidence 1 12589999996544221
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccc-cCc-CchHHHHHhccCceeeEEecCC
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWA-EGI-RTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~-~~~-~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++......... ... .....+...+. ..
T Consensus 155 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 223 (264)
T 3ucx_A 155 --AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA---------AG 223 (264)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHH---------TT
T ss_pred --CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHh---------cc
Confidence 23458999999999888755 36899999999999876432100000 000 00111111111 22
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+..++|+|++++.++........ ++++++.+|
T Consensus 224 ~p~~r~~~p~dvA~~v~~L~s~~~~~it--G~~i~vdGG 260 (264)
T 3ucx_A 224 SDLKRLPTEDEVASAILFMASDLASGIT--GQALDVNCG 260 (264)
T ss_dssp SSSSSCCBHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcccCCCHHHHHHHHHHHcCccccCCC--CCEEEECCC
Confidence 2334678999999999998874433222 889999887
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-18 Score=167.27 Aligned_cols=214 Identities=15% Similarity=0.115 Sum_probs=138.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+.+ .+... ..++.+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~l~~~---------~~~~~~ 84 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA---RLVLSDVDQPA---LEQAVN---------GLRGQ---------GFDAHG 84 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHT---------TCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHH---------HHHhc---------CCceEE
Confidence 5789999999999999999999999996 56888886432 111111 11111 257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++....
T Consensus 85 ~~~Dv~-------d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 157 (301)
T 3tjr_A 85 VVCDVR-------HLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQ 157 (301)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCC-------CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 999999 4444445443 79999999997532 24577899999999999999875421
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ ..++|++||...+...
T Consensus 158 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 175 (301)
T 3tjr_A 158 GTGGHIAFTASFAGLVPN-------------------------------------------------------------- 175 (301)
T ss_dssp CSCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred CCCcEEEEeCchhhcCCC--------------------------------------------------------------
Confidence 2 4589999996544221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..|+++++++|+.|..+...... ......... ........+......
T Consensus 176 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~ 247 (301)
T 3tjr_A 176 AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSE-------RIRGADYGM-SATPEGAFGPLPTQD 247 (301)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHH-------HHC----------------------
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccc-------cccchhhcc-ccChhhhcccccccc
Confidence 23468999999888877654 35899999999998765321100 000000000 000001112223344
Q ss_pred ceeehhhhhhHHHHHHHh
Q 037479 307 DVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~ 324 (492)
++++++|||++++.++..
T Consensus 248 ~~~~pedvA~~i~~~l~~ 265 (301)
T 3tjr_A 248 ESVSADDVARLTADAILA 265 (301)
T ss_dssp -CCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhc
Confidence 689999999999999974
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=5.4e-18 Score=165.19 Aligned_cols=227 Identities=12% Similarity=0.128 Sum_probs=150.1
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+. ..++...+. ....++.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~~~~----~~~~~~~ 75 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS---NVVIASRKLER---LKSAA---------DELQANLPP----TKQARVI 75 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHTSCT----TCCCCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhhccc----cCCccEE
Confidence 46789999999999999999999999996 56888886421 11111 112111100 0125789
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 76 ~~~~D~~-------~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 148 (303)
T 1yxm_A 76 PIQCNIR-------NEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMK 148 (303)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHH
T ss_pred EEecCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999 4444445544 59999999995432 2456788999999999999998662
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||....+.
T Consensus 149 ~~~~~iv~isS~~~~~~--------------------------------------------------------------- 165 (303)
T 1yxm_A 149 EHGGSIVNIIVPTKAGF--------------------------------------------------------------- 165 (303)
T ss_dssp HHCEEEEEECCCCTTCC---------------------------------------------------------------
T ss_pred hcCCeEEEEEeecccCC---------------------------------------------------------------
Confidence 13468999999762111
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCC-CCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYK-EPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~-~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..+.+.+.+ ..+++++++||+.|+++.. .....+.. .....+..+ ...
T Consensus 166 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~------~~~~~~~~~---------~p~ 230 (303)
T 1yxm_A 166 PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ------SFFEGSFQK---------IPA 230 (303)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGG------GGGTTGGGG---------STT
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccch------HHHHHHHhc---------Ccc
Confidence 12357899998888777654 3489999999999999732 11111100 111111100 011
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+++++|+|++++.++........ ++++++.++
T Consensus 231 ~~~~~~~dvA~~i~~l~~~~~~~~~--G~~~~v~gG 264 (303)
T 1yxm_A 231 KRIGVPEEVSSVVCFLLSPAASFIT--GQSVDVDGG 264 (303)
T ss_dssp SSCBCTHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred cCCCCHHHHHHHHHHHhCcccccCC--CcEEEECCC
Confidence 2478899999999998864332222 789999988
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-18 Score=163.96 Aligned_cols=222 Identities=17% Similarity=0.178 Sum_probs=150.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+. ++ ...++..
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 77 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGA---YVVVADVNEDA---AVRVA-------------NE--------IGSKAFG 77 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHH-------------HH--------HCTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------hCCceEE
Confidence 5689999999999999999999999996 56888886321 11111 11 1357889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 78 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 150 (277)
T 4dqx_A 78 VRVDVS-------SAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN 150 (277)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 999999 4444445443 79999999996532 25678889999999999998875421
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 151 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 168 (277)
T 4dqx_A 151 GGGSIINTTSYTATSAI--------------------------------------------------------------A 168 (277)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCcEEEEECchhhCcCC--------------------------------------------------------------C
Confidence 34589999996544221 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|.++.... ..............+ ........
T Consensus 169 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~---------~~~~~~~r 236 (277)
T 4dqx_A 169 DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTK---IFAEAKDPAKLRSDF---------NARAVMDR 236 (277)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHHTCSCHHHHHHHH---------HTTSTTCS
T ss_pred CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhh---hcccccchhHHHHHH---------HhcCcccC
Confidence 3468999999999888755 358999999999987653100 000000111111111 11122335
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++........ |+++++.+|
T Consensus 237 ~~~pedvA~~v~~L~s~~~~~it--G~~i~vdGG 268 (277)
T 4dqx_A 237 MGTAEEIAEAMLFLASDRSRFAT--GSILTVDGG 268 (277)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESSS
T ss_pred CcCHHHHHHHHHHHhCCccCCCc--CCEEEECCc
Confidence 77899999999998875433222 889999988
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-18 Score=163.25 Aligned_cols=215 Identities=16% Similarity=0.189 Sum_probs=147.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|. +|+++.|+.... .....
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~~--------------------------------~~~~~ 70 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGA---RVAVADRAVAGI--------------------------------AADLH 70 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEECSSCCTTS--------------------------------CCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHH--------------------------------Hhhhc
Confidence 5789999999999999999999999996 557877764432 11244
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 71 ~~~Dv~-------~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 143 (266)
T 3uxy_A 71 LPGDLR-------EAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA 143 (266)
T ss_dssp CCCCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCcCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 578988 444333333 379999999997642 2557888999999999999988421 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 144 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 161 (266)
T 3uxy_A 144 GGGAIVNVASCWGLRPG--------------------------------------------------------------P 161 (266)
T ss_dssp TCEEEEEECCSBTTBCC--------------------------------------------------------------T
T ss_pred CCcEEEEECCHHhCCCC--------------------------------------------------------------C
Confidence 45789999996544211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+.+.+ ..++++.+++|+.|.++...... .............+. .......
T Consensus 162 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~---------~~~p~~r 230 (266)
T 3uxy_A 162 GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGF--AKRGFDPDRAVAELG---------RTVPLGR 230 (266)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHH--HHTTCCHHHHHHHHH---------TTSTTSS
T ss_pred CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhh--hcccccchHHHHHHH---------hcCCCCC
Confidence 3457999999999888755 35899999999999876421100 000000111111111 1222346
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++........ |+++++.+|
T Consensus 231 ~~~pedvA~~v~~L~s~~~~~it--G~~i~vdGG 262 (266)
T 3uxy_A 231 IAEPEDIADVVLFLASDAARYLC--GSLVEVNGG 262 (266)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCCc--CCEEEECcC
Confidence 78899999999998875433222 889999987
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.77 E-value=8e-18 Score=159.53 Aligned_cols=221 Identities=13% Similarity=0.116 Sum_probs=150.7
Q ss_pred CCcccHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchh
Q 037479 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLN 80 (492)
Q Consensus 1 ~~~~~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~ 80 (492)
|.|++-...+++|+++||||+|+||++++++|++.|. +|+++.|+... .+.+. ..+.+..
T Consensus 1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~~----- 60 (252)
T 3f1l_A 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGA---TVILLGRNEEK---LRQVA---------SHINEET----- 60 (252)
T ss_dssp CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHHH-----
T ss_pred CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhhc-----
Confidence 4455555668999999999999999999999999996 56888886422 11111 1111111
Q ss_pred hhccCceEEEecCC--CCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHH
Q 037479 81 ALISEKITLVPGDI--TREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKH 143 (492)
Q Consensus 81 ~~~~~~v~~v~gDl--~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ 143 (492)
..++.++.+|+ + +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.+
T Consensus 61 ---~~~~~~~~~D~~~~-------~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 130 (252)
T 3f1l_A 61 ---GRQPQWFILDLLTC-------TSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130 (252)
T ss_dssp ---SCCCEEEECCTTTC-------CHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHH
T ss_pred ---CCCceEEEEecccC-------CHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence 23678899999 6 3433334433 79999999997421 24567889999999999
Q ss_pred HHHHHHhc---ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Q 037479 144 VLNFSKKC---AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAM 220 (492)
Q Consensus 144 ll~~a~~~---~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (492)
+++++... .+..++|++||...+...
T Consensus 131 ~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------------------------------------------------- 159 (252)
T 3f1l_A 131 LTQALLPLLLKSDAGSLVFTSSSVGRQGR--------------------------------------------------- 159 (252)
T ss_dssp HHHHHHHHHHTSSSCEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHHHHHHHHCCCCEEEEECChhhccCC---------------------------------------------------
Confidence 99988432 145689999996543211
Q ss_pred hhhhccccccCCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceee
Q 037479 221 KDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLT 296 (492)
Q Consensus 221 ~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~ 296 (492)
.....|+.||+..+.+.+.+ ...+++..+.|+.|..+.. .....
T Consensus 160 -----------~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~-----------------~~~~~---- 207 (252)
T 3f1l_A 160 -----------ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR-----------------ASAFP---- 207 (252)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH-----------------HHHCT----
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh-----------------hhhCC----
Confidence 23468999999999888755 3349999999988765321 00000
Q ss_pred EEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 297 CFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 297 ~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
......+...+|+|++++.++........ |+++++.+|
T Consensus 208 -----~~~~~~~~~p~dva~~~~~L~s~~~~~it--G~~i~vdgG 245 (252)
T 3f1l_A 208 -----TEDPQKLKTPADIMPLYLWLMGDDSRRKT--GMTFDAQPG 245 (252)
T ss_dssp -----TCCGGGSBCTGGGHHHHHHHHSGGGTTCC--SCEEESSCC
T ss_pred -----ccchhccCCHHHHHHHHHHHcCccccCCC--CCEEEeCCC
Confidence 01112356789999999998875433222 889999988
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-18 Score=165.63 Aligned_cols=220 Identities=14% Similarity=0.127 Sum_probs=150.6
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.++ +.+. ..++.
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~ 80 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGA---MVIGTATTEAG---AEGIGAA---------FKQA---------GLEGR 80 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHH---------HHHH---------TCCCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEE
Confidence 46789999999999999999999999996 56888885422 1221111 1111 25678
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
.+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 81 ~~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 153 (270)
T 3ftp_A 81 GAVLNVN-------DATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMK 153 (270)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 8999999 4444445444 79999999997542 2567889999999999999987542
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+-.++|++||.......
T Consensus 154 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 171 (270)
T 3ftp_A 154 ARGGRIVNITSVVGSAGN-------------------------------------------------------------- 171 (270)
T ss_dssp HTCEEEEEECCHHHHHCC--------------------------------------------------------------
T ss_pred cCCCEEEEECchhhCCCC--------------------------------------------------------------
Confidence 134589999996544211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++.....+ ......+. ......
T Consensus 172 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---------~~~~~~~~---------~~~p~~ 233 (270)
T 3ftp_A 172 PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP---------QEQQTALK---------TQIPLG 233 (270)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC---------HHHHHHHH---------TTCTTC
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC---------HHHHHHHH---------hcCCCC
Confidence 12458999999888777654 35899999999998765432111 01111111 111223
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+..++|+|++++.++........ |+++++.+|
T Consensus 234 r~~~pedvA~~v~~L~s~~~~~it--G~~i~vdGG 266 (270)
T 3ftp_A 234 RLGSPEDIAHAVAFLASPQAGYIT--GTTLHVNGG 266 (270)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCCCcCCcc--CcEEEECCC
Confidence 578899999999988864333222 889999987
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=167.18 Aligned_cols=234 Identities=16% Similarity=0.219 Sum_probs=150.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.+++ .+.. ...++.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~l---------~~~~-------~~~~~~~ 62 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA---KVALVDWNLEA---GVQCKAAL---------HEQF-------EPQKTLF 62 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------TTTS-------CGGGEEE
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hhhc-------CCCceEE
Confidence 5789999999999999999999999996 56888886421 11111111 1100 0246889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHH----Hhcc--ccee
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFS----KKCA--KLIV 156 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~--~~~~ 156 (492)
+.+|++ +.+..+.+++ ++|+|||+||... .+.++..+++|+.|+..+.+.+ ++.+ +..+
T Consensus 63 ~~~D~~-------~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~ 134 (267)
T 2gdz_A 63 IQCDVA-------DQQQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGI 134 (267)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred EecCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCE
Confidence 999999 4444444443 5799999999754 4567888999999776655544 3321 1578
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|++||...+... .....
T Consensus 135 iv~isS~~~~~~~--------------------------------------------------------------~~~~~ 152 (267)
T 2gdz_A 135 IINMSSLAGLMPV--------------------------------------------------------------AQQPV 152 (267)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------------TTCHH
T ss_pred EEEeCCccccCCC--------------------------------------------------------------CCCch
Confidence 9999997655321 12357
Q ss_pred HHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 237 YVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
|+.||+..|.+.+.+ ..++++++++|+.|.++.......- ........+..... .+.....++
T Consensus 153 Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~ 222 (267)
T 2gdz_A 153 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKE-ENMGQYIEYKDHIK---------DMIKYYGIL 222 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCH-HHHGGGGGGHHHHH---------HHHHHHCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccc-cccchhhhHHHHHH---------HHhccccCC
Confidence 999999999887642 4689999999999876532110000 00000000000000 000112468
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHH
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNL 351 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~ 351 (492)
+++|+|++++.++.... .. +++++++++ .++++.|+
T Consensus 223 ~~~dvA~~v~~l~s~~~-~~---G~~~~v~gg--~~~~~~~~ 258 (267)
T 2gdz_A 223 DPPLIANGLITLIEDDA-LN---GAIMKITTS--KGIHFQDY 258 (267)
T ss_dssp CHHHHHHHHHHHHHCTT-CS---SCEEEEETT--TEEEECCC
T ss_pred CHHHHHHHHHHHhcCcC-CC---CcEEEecCC--CcccccCc
Confidence 99999999999887432 22 889999998 67776654
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.3e-18 Score=159.42 Aligned_cols=187 Identities=17% Similarity=0.138 Sum_probs=126.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+|+|+||||+|+||++++++|++.|+ +|+++.|+... .+.+. ++ ..++.++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~~ 55 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGY---RVGLMARDEKR---LQALA-------------AE---------LEGALPL 55 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH---------STTCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------HH---------hhhceEE
Confidence 367899999999999999999999996 56888885321 11111 11 1367889
Q ss_pred ecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhcc
Q 037479 91 PGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKCA 152 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~ 152 (492)
.+|++ +.+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+ ++.
T Consensus 56 ~~D~~-------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~- 127 (234)
T 2ehd_A 56 PGDVR-------EEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR- 127 (234)
T ss_dssp ECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-
T ss_pred EecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-
Confidence 99999 444443443 378999999996532 2457788999999998766654 333
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||..++... .
T Consensus 128 ~~~~iv~isS~~~~~~~--------------------------------------------------------------~ 145 (234)
T 2ehd_A 128 GGGTIVNVGSLAGKNPF--------------------------------------------------------------K 145 (234)
T ss_dssp TCEEEEEECCTTTTSCC--------------------------------------------------------------T
T ss_pred CCcEEEEECCchhcCCC--------------------------------------------------------------C
Confidence 56899999997554221 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+.+.+ ..+++++++||+.|..+.....+ .. ..
T Consensus 146 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------------~~-----------~~ 196 (234)
T 2ehd_A 146 GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP------------------GQ-----------AW 196 (234)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC--------------------------------------------
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc------------------cc-----------cC
Confidence 3468999999888877654 35899999999988654321100 00 01
Q ss_pred eeehhhhhhHHHHHHHh
Q 037479 308 VIPADMVVNAIVVAVVA 324 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~ 324 (492)
++..+|+|++++.++..
T Consensus 197 ~~~~~dvA~~~~~l~~~ 213 (234)
T 2ehd_A 197 KLKPEDVAQAVLFALEM 213 (234)
T ss_dssp -CCHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHhCC
Confidence 46899999999999874
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.3e-18 Score=161.48 Aligned_cols=220 Identities=14% Similarity=0.093 Sum_probs=146.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ +..++.+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 56 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGA---KVAFSDINEAA---GQQLA-------------AE--------LGERSMF 56 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECSCHHH---HHHHH-------------HH--------HCTTEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------cCCceEE
Confidence 5789999999999999999999999996 55888775321 11111 11 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 57 ~~~D~~-------~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 129 (253)
T 1hxh_A 57 VRHDVS-------SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET 129 (253)
T ss_dssp ECCCTT-------CHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred EEccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc
Confidence 999999 4444444443 57999999997542 2457888999999888777655331 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+ .++|++||...+... .
T Consensus 130 ~-g~iv~isS~~~~~~~--------------------------------------------------------------~ 146 (253)
T 1hxh_A 130 G-GSIINMASVSSWLPI--------------------------------------------------------------E 146 (253)
T ss_dssp C-EEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred C-CEEEEEcchhhcCCC--------------------------------------------------------------C
Confidence 4 799999997654321 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cC--CCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KE--NMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~--~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
....|+.||+..|.+.+.+ .. +++++++||+.|+++..... ... ......+ .... .....
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~---~~~-~~~~~~~---~~~~------~~~p~ 213 (253)
T 1hxh_A 147 QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS---LPK-GVSKEMV---LHDP------KLNRA 213 (253)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH---SCT-TCCHHHH---BCBT------TTBTT
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhc---cch-hhhHHHH---hhhh------ccCcc
Confidence 2358999999999888765 23 89999999999988653210 000 0000000 0000 00112
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+..++|+|++++.++........ ++++++.++
T Consensus 214 ~~~~~~~dvA~~~~~l~s~~~~~~t--G~~~~vdgG 247 (253)
T 1hxh_A 214 GRAYMPERIAQLVLFLASDESSVMS--GSELHADNS 247 (253)
T ss_dssp CCEECHHHHHHHHHHHHSGGGTTCC--SCEEEESSS
T ss_pred CCCCCHHHHHHHHHHHcCccccCCC--CcEEEECCC
Confidence 2478999999999998874332222 789999887
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=6.3e-18 Score=159.95 Aligned_cols=214 Identities=12% Similarity=0.076 Sum_probs=144.1
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
...-+++|+||||||||+||++++++|++.|+ +|+++.|+. +.+. + . .
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~------~~~~-~---------------------~-~ 60 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGA---EVTICARNE------ELLK-R---------------------S-G 60 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHH-H---------------------T-C
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCH------HHHH-h---------------------h-C
Confidence 44557899999999999999999999999996 568888864 1111 0 0 2
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH----Hhcccc
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS----KKCAKL 154 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~~ 154 (492)
++.++ +|+. . +.+.....+.++|+|||+||.... .+.++..+++|+.|+.++.+.+ ++. +.
T Consensus 61 ~~~~~-~D~~-~-----~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~ 132 (249)
T 1o5i_A 61 HRYVV-CDLR-K-----DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GW 132 (249)
T ss_dssp SEEEE-CCTT-T-----CHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TC
T ss_pred CeEEE-eeHH-H-----HHHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CC
Confidence 45667 9982 1 222222333489999999996532 2457788999999987776554 333 56
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||..++... ...
T Consensus 133 g~iv~isS~~~~~~~--------------------------------------------------------------~~~ 150 (249)
T 1o5i_A 133 GRIVAITSFSVISPI--------------------------------------------------------------ENL 150 (249)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------------TTB
T ss_pred cEEEEEcchHhcCCC--------------------------------------------------------------CCC
Confidence 799999997665321 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHH-hccCceeeEEecCCCcccce
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAV-GYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~d~ 308 (492)
..|+.||+..+.+.+.. ..+++++++||+.|.++...... ..... .+.. ......+
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~---------~~p~~~~ 212 (249)
T 1o5i_A 151 YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL---------SEEKKKQVES---------QIPMRRM 212 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS---------CHHHHHHHHT---------TSTTSSC
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc---------hhhHHHHHHh---------cCCCCCC
Confidence 58999999999887654 35899999999999886531100 01111 1111 1112357
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++++|+|++++.++........ ++++++.++
T Consensus 213 ~~~~dvA~~i~~l~s~~~~~~t--G~~~~vdgG 243 (249)
T 1o5i_A 213 AKPEEIASVVAFLCSEKASYLT--GQTIVVDGG 243 (249)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred cCHHHHHHHHHHHcCccccCCC--CCEEEECCC
Confidence 8999999999988864332222 789999887
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-18 Score=164.53 Aligned_cols=221 Identities=13% Similarity=0.103 Sum_probs=150.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||+|+||++++++|++.|. +|+++.|+... .+.+.++ ++. ...++.+
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~---------l~~---------~~~~~~~ 79 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA---RILINGTDPSR---VAQTVQE---------FRN---------VGHDAEA 79 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEECCSCHHH---HHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHh---------cCCceEE
Confidence 6789999999999999999999999996 55777775321 1111111 111 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 80 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 152 (271)
T 4ibo_A 80 VAFDVT-------SESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR 152 (271)
T ss_dssp CCCCTT-------CHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999 4444445544 79999999997532 25678889999999999988775531
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 153 ~~g~iV~isS~~~~~~~--------------------------------------------------------------~ 170 (271)
T 4ibo_A 153 GYGKIVNIGSLTSELAR--------------------------------------------------------------A 170 (271)
T ss_dssp TCEEEEEECCGGGTSBC--------------------------------------------------------------T
T ss_pred CCcEEEEEccHHhCCCC--------------------------------------------------------------C
Confidence 34689999995433211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++..++|+.|.++...... . .......+..+ .....
T Consensus 171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~----~~~~~~~~~~~---------~p~~r 234 (271)
T 4ibo_A 171 TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI---D----NPEFDAWVKAR---------TPAKR 234 (271)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH---H----CHHHHHHHHHH---------STTCS
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc---c----CHHHHHHHHhc---------CCCCC
Confidence 3468999999999888765 35899999999999876432110 0 01111111111 11224
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++........ |+++++.+|
T Consensus 235 ~~~pedva~~v~~L~s~~~~~it--G~~i~vdGG 266 (271)
T 4ibo_A 235 WGKPQELVGTAVFLSASASDYVN--GQIIYVDGG 266 (271)
T ss_dssp CBCGGGGHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCccccCCC--CcEEEECCC
Confidence 67899999999988874333222 889999987
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-17 Score=159.42 Aligned_cols=220 Identities=13% Similarity=0.081 Sum_probs=149.5
Q ss_pred cCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+|+||||+ |+||++++++|++.|+ +|+++.|+... .+.+. .+.++. .++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~----------~l~~~~---------~~~ 58 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA---TLAFTYLNESL---EKRVR----------PIAQEL---------NSP 58 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC---EEEEEESSTTT---HHHHH----------HHHHHT---------TCC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH----------HHHHhc---------CCc
Confidence 578999999999 9999999999999996 56888887642 11211 111111 236
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 59 ~~~~~D~~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 131 (275)
T 2pd4_A 59 YVYELDVS-------KEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLK 131 (275)
T ss_dssp CEEECCTT-------CHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 78999999 4444444443 68999999997532 14577889999999999999998
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... .-.++|++||.......
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~----------------------------------------------------------- 152 (275)
T 2pd4_A 132 PLLNNGASVLTLSYLGSTKYM----------------------------------------------------------- 152 (275)
T ss_dssp GGEEEEEEEEEEECGGGTSBC-----------------------------------------------------------
T ss_pred HHhccCCEEEEEecchhcCCC-----------------------------------------------------------
Confidence 742 12589999995443211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++.....+ ........+....
T Consensus 153 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~--------- 213 (275)
T 2pd4_A 153 ---AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-------DFRMILKWNEINA--------- 213 (275)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHS---------
T ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc-------ccHHHHHHHHhcC---------
Confidence 12457999999999888755 35899999999999886542211 1111111111100
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+..++|+|++++.++........ ++++++.++
T Consensus 214 p~~~~~~p~dva~~~~~l~s~~~~~~t--G~~~~vdgg 249 (275)
T 2pd4_A 214 PLRKNVSLEEVGNAGMYLLSSLSSGVS--GEVHFVDAG 249 (275)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCCCCCHHHHHHHHHHHhCccccCCC--CCEEEECCC
Confidence 011356889999999998864332222 788998877
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-17 Score=160.94 Aligned_cols=222 Identities=12% Similarity=0.071 Sum_probs=150.6
Q ss_pred hhcCCCEEEEeCCcch--hhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 8 EFLENKTILVTGATGF--LAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 8 ~~~~~~~vlITGatGf--lG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
.-+++|+++||||+|+ ||++++++|++.|. +|+++.|+... .+.+. .+.++ ..
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~----------~~~~~---------~~ 81 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGA---ELAFTYQGDAL---KKRVE----------PLAEE---------LG 81 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTC---EEEEEECSHHH---HHHHH----------HHHHH---------HT
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH----------HHHHh---------cC
Confidence 3478999999999999 99999999999996 45788876321 11111 11111 14
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHH
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.+++++
T Consensus 82 ~~~~~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 154 (293)
T 3grk_A 82 AFVAGHCDVA-------DAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRR 154 (293)
T ss_dssp CEEEEECCTT-------CHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEECCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999 4444444443 79999999997631 246788999999999999999
Q ss_pred HHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 148 SKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 148 a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
+.... .-.++|++||.......
T Consensus 155 ~~~~m~~~g~Iv~isS~~~~~~~--------------------------------------------------------- 177 (293)
T 3grk_A 155 AEKLMADGGSILTLTYYGAEKVM--------------------------------------------------------- 177 (293)
T ss_dssp HHHHTTTCEEEEEEECGGGTSBC---------------------------------------------------------
T ss_pred HHHhccCCCEEEEEeehhhccCC---------------------------------------------------------
Confidence 87632 33589999996544321
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~ 301 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|.++...... ........+...
T Consensus 178 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~-------- 237 (293)
T 3grk_A 178 -----PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG-------DFRYILKWNEYN-------- 237 (293)
T ss_dssp -----TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C-------CHHHHHHHHHHH--------
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc-------chHHHHHHHHhc--------
Confidence 23468999999999888755 35899999999999886543211 111111111110
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+..++|+|++++.++........ ++++++.+|
T Consensus 238 -~p~~r~~~pedvA~~v~~L~s~~~~~it--G~~i~vdGG 274 (293)
T 3grk_A 238 -APLRRTVTIDEVGDVGLYFLSDLSRSVT--GEVHHADSG 274 (293)
T ss_dssp -STTSSCCCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred -CCCCCCCCHHHHHHHHHHHcCccccCCc--ceEEEECCC
Confidence 1112467789999999998875433222 889999988
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-18 Score=161.12 Aligned_cols=208 Identities=16% Similarity=0.186 Sum_probs=143.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+.... +.+..
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~--------------------------------~~~~~ 57 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGH---KVAVTHRGSGAP--------------------------------KGLFG 57 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSSCCC--------------------------------TTSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHH--------------------------------HHhcC
Confidence 6789999999999999999999999996 568888865432 11224
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 58 ~~~D~~-------~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 130 (247)
T 1uzm_A 58 VEVDVT-------DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN 130 (247)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred eeccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 789999 4444444443 68999999997542 2467889999999999999987642 2
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 131 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 148 (247)
T 1uzm_A 131 KFGRMIFIGSVSGLWGI--------------------------------------------------------------G 148 (247)
T ss_dssp TCEEEEEECCCCC-------------------------------------------------------------------
T ss_pred CCCEEEEECCHhhccCC--------------------------------------------------------------C
Confidence 45799999996543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+.+.+ ..++++++++|+.|.++.....+ ......+... .....
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~---------~p~~~ 210 (247)
T 1uzm_A 149 NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD---------ERIQQGALQF---------IPAKR 210 (247)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC---------HHHHHHHGGG---------CTTCS
T ss_pred CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC---------HHHHHHHHhc---------CCCCC
Confidence 2457999999888877654 35899999999998765321100 0111111110 01124
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+++++|+|++++.++........ ++++++.++
T Consensus 211 ~~~~~dvA~~~~~l~s~~~~~~~--G~~i~vdgG 242 (247)
T 1uzm_A 211 VGTPAEVAGVVSFLASEDASYIS--GAVIPVDGG 242 (247)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHcCccccCCc--CCEEEECCC
Confidence 78999999999998864332222 889999887
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-17 Score=160.93 Aligned_cols=232 Identities=16% Similarity=0.120 Sum_probs=151.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|+ +|+++.|+... ..+.+.++ +.+ ...++.+
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~--~~~~~~~~---------~~~---------~~~~~~~ 83 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGC---KVIVNYANSTE--SAEEVVAA---------IKK---------NGSDAAC 83 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCchH--HHHHHHHH---------HHH---------hCCCeEE
Confidence 5789999999999999999999999996 56888886421 11111111 111 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-ccc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-AKL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~ 154 (492)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++.+. .+.
T Consensus 84 ~~~D~~~-------~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 156 (283)
T 1g0o_A 84 VKANVGV-------VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG 156 (283)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence 9999994 44333333 379999999997643 2567888999999999999998774 234
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||........ ...
T Consensus 157 g~iv~isS~~~~~~~~-------------------------------------------------------------~~~ 175 (283)
T 1g0o_A 157 GRLILMGSITGQAKAV-------------------------------------------------------------PKH 175 (283)
T ss_dssp CEEEEECCGGGTCSSC-------------------------------------------------------------SSC
T ss_pred CeEEEEechhhccCCC-------------------------------------------------------------CCC
Confidence 6899999965332110 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-CccccCcCc-hHHHHHhccCceeeEEecCCCcccc
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-PGWAEGIRT-IDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~gw~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
..|+.||+..|.+.+.+ ..++++.+++|+.|.++..... ..+...... .......+..+. ......
T Consensus 176 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~r 248 (283)
T 1g0o_A 176 AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ-------WSPLRR 248 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH-------SCTTCS
T ss_pred cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc-------CCCCCC
Confidence 68999999999888755 3589999999999987642110 000000000 011111111100 011224
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++........ |+++++.++
T Consensus 249 ~~~p~dvA~~v~~l~s~~~~~it--G~~i~vdgG 280 (283)
T 1g0o_A 249 VGLPIDIARVVCFLASNDGGWVT--GKVIGIDGG 280 (283)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCccccCcC--CCEEEeCCC
Confidence 67899999999998874332222 789998876
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-17 Score=157.06 Aligned_cols=213 Identities=16% Similarity=0.116 Sum_probs=145.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ .++.+
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~----------~~~~~ 53 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGA---RLVACDIEEGP---LREAA-------------EA----------VGAHP 53 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HT----------TTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH----------cCCEE
Confidence 4689999999999999999999999996 55888886321 11111 10 13678
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 54 ~~~D~~-------~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 126 (245)
T 1uls_A 54 VVMDVA-------DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126 (245)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 899999 4444444443 58999999997542 2457788999999999999888653 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...++. .
T Consensus 127 ~~g~iv~isS~~~~~~---------------------------------------------------------------~ 143 (245)
T 1uls_A 127 NPGSIVLTASRVYLGN---------------------------------------------------------------L 143 (245)
T ss_dssp CCEEEEEECCGGGGCC---------------------------------------------------------------T
T ss_pred CCCEEEEEccchhcCC---------------------------------------------------------------C
Confidence 4578999999762221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..++++++++|+.|..+.....+ ......+... .+ ...
T Consensus 144 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~----~p-----~~~ 205 (245)
T 1uls_A 144 GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---------EKVREKAIAA----TP-----LGR 205 (245)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---------HHHHHHHHHT----CT-----TCS
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC---------HHHHHHHHhh----CC-----CCC
Confidence 2357999999888877654 35899999999999776432111 1111111100 00 113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++..+|+|++++.++........ ++++++.++
T Consensus 206 ~~~~~dvA~~v~~l~s~~~~~~t--G~~~~vdgG 237 (245)
T 1uls_A 206 AGKPLEVAYAALFLLSDESSFIT--GQVLFVDGG 237 (245)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCCc--CCEEEECCC
Confidence 67899999999998874332222 789999887
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.1e-17 Score=156.77 Aligned_cols=222 Identities=13% Similarity=0.102 Sum_probs=152.3
Q ss_pred cCCCEEEEeCCcch--hhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGATGF--LAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGatGf--lG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++||||+|+ ||++++++|++.|. +|+++.|+.+.....+. +.++.+ ..++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~-------------~~~~~~-------~~~~ 61 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA---RLIFTYAGERLEKSVHE-------------LAGTLD-------RNDS 61 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGGHHHHHH-------------HHHTSS-------SCCC
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC---EEEEecCchHHHHHHHH-------------HHHhcC-------CCCc
Confidence 57899999999999 99999999999996 55788886432221111 111211 1378
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
.++.+|+++ .+..+.+++ ++|++||+||.... .+.+...+++|+.|+.++++++.
T Consensus 62 ~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 134 (266)
T 3oig_A 62 IILPCDVTN-------DAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAAR 134 (266)
T ss_dssp EEEECCCSS-------SHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred eEEeCCCCC-------HHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHH
Confidence 999999995 333434443 68999999997541 14567889999999999999988
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... .-.++|++||.......
T Consensus 135 ~~~~~~g~iv~isS~~~~~~~----------------------------------------------------------- 155 (266)
T 3oig_A 135 PMMTEGGSIVTLTYLGGELVM----------------------------------------------------------- 155 (266)
T ss_dssp GGCTTCEEEEEEECGGGTSCC-----------------------------------------------------------
T ss_pred hhcCCCceEEEEecccccccC-----------------------------------------------------------
Confidence 642 23589999986544211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|..+...... ........+... .
T Consensus 156 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~ 216 (266)
T 3oig_A 156 ---PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS-------DFNSILKDIEER---------A 216 (266)
T ss_dssp ---TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-------THHHHHHHHHHH---------S
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc-------chHHHHHHHHhc---------C
Confidence 23468999999999887755 35899999999999876543221 111222111111 0
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+..++|+|++++.++........ ++++++.+|
T Consensus 217 ~~~~~~~p~dva~~v~~l~s~~~~~~t--G~~i~vdGG 252 (266)
T 3oig_A 217 PLRRTTTPEEVGDTAAFLFSDMSRGIT--GENLHVDSG 252 (266)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCCCCHHHHHHHHHHHcCCchhcCc--CCEEEECCC
Confidence 112467899999999998875433222 889999988
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.4e-18 Score=159.38 Aligned_cols=217 Identities=14% Similarity=0.130 Sum_probs=148.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHh-hCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILR-VQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~-~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++|++|||||+|+||++++++|++ .|. +|++..|+.... .+++.+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~---~v~~~~~~~~~~-------------------------------~~~~~~ 48 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNH---TVINIDIQQSFS-------------------------------AENLKF 48 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTE---EEEEEESSCCCC-------------------------------CTTEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCc---EEEEeccccccc-------------------------------cccceE
Confidence 578999999999999999999998 664 557777754421 256788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-----CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhccc-cee
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-----KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCAK-LIV 156 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-----~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~~~ 156 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++..... -.+
T Consensus 49 ~~~Dv~-------~~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~ 121 (244)
T 4e4y_A 49 IKADLT-------KQQDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGAS 121 (244)
T ss_dssp EECCTT-------CHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEE
T ss_pred EecCcC-------CHHHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcE
Confidence 999999 4444445544 79999999997532 256788899999999999999876421 147
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|++||...+... .....
T Consensus 122 iv~~sS~~~~~~~--------------------------------------------------------------~~~~~ 139 (244)
T 4e4y_A 122 IVFNGSDQCFIAK--------------------------------------------------------------PNSFA 139 (244)
T ss_dssp EEEECCGGGTCCC--------------------------------------------------------------TTBHH
T ss_pred EEEECCHHHccCC--------------------------------------------------------------CCCch
Confidence 9999996544221 12358
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCc-cccCc-CchHHHHHhccCceeeEEecCCCccccee
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPG-WAEGI-RTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~g-w~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
|+.||+..+.+.+.+ ..++++.+++|+.|.++....... +.... .......... ........+.
T Consensus 140 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~p~~r~~ 210 (244)
T 4e4y_A 140 YTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQE---------EKEFPLNRIA 210 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHH---------HTTSTTSSCB
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHH---------hhcCCCCCCc
Confidence 999999999988755 358999999999987654311000 00000 0000011111 1112233578
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++|+|++++.++........ ++++++.+|
T Consensus 211 ~p~dvA~~v~~l~s~~~~~it--G~~i~vdGG 240 (244)
T 4e4y_A 211 QPQEIAELVIFLLSDKSKFMT--GGLIPIDGG 240 (244)
T ss_dssp CHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CHHHHHHHHHHHhcCcccccc--CCeEeECCC
Confidence 899999999999875433222 889999887
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.8e-17 Score=157.12 Aligned_cols=224 Identities=16% Similarity=0.115 Sum_probs=148.9
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-+++|++|||||+|+||++++++|++.|+ +|+++.|+... .+.+. ..+.+.. ..++.
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~ 74 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGC---SVVVASRNLEE---ASEAA---------QKLTEKY--------GVETM 74 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHHH--------CCCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHHhc--------CCeEE
Confidence 36789999999999999999999999996 56888886421 11111 1111111 25688
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 75 ~~~~Dl~-------~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 147 (267)
T 1vl8_A 75 AFRCDVS-------NYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRE 147 (267)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred EEEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 8999999 4444444443 79999999997542 1456788999999999998887432
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||..+ +... .
T Consensus 148 ~~~g~iv~isS~~~-~~~~-------~----------------------------------------------------- 166 (267)
T 1vl8_A 148 SDNPSIINIGSLTV-EEVT-------M----------------------------------------------------- 166 (267)
T ss_dssp CSSCEEEEECCGGG-TCCC-------S-----------------------------------------------------
T ss_pred cCCcEEEEECCcch-hccC-------C-----------------------------------------------------
Confidence 14579999999652 1100 0
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..|.+.+.+ ..++++++++|+.|.++.... +.. . ......+... ....
T Consensus 167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~---~-~~~~~~~~~~---------~p~~ 230 (267)
T 1vl8_A 167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA---VFS---D-PEKLDYMLKR---------IPLG 230 (267)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH---HHT---C-HHHHHHHHHT---------CTTS
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc---ccc---C-hHHHHHHHhh---------CCCC
Confidence 12458999999999988765 358999999999987654311 000 0 0111111110 0112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++..+|+|++++.++........ ++++.+.++
T Consensus 231 ~~~~p~dvA~~v~~l~s~~~~~it--G~~i~vdGG 263 (267)
T 1vl8_A 231 RTGVPEDLKGVAVFLASEEAKYVT--GQIIFVDGG 263 (267)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcCccccCCc--CCeEEECCC
Confidence 478899999999998864332222 788998876
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=7.4e-18 Score=163.67 Aligned_cols=240 Identities=15% Similarity=0.149 Sum_probs=155.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|+ +|+++.|+... .+.+.++ +....+ ...++.+
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~~~------~~~~~~~ 82 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGA---QVTITGRNEDR---LEETKQQ---------ILKAGV------PAEKINA 82 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHTTC------CGGGEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhcCC------CCceEEE
Confidence 5789999999999999999999999996 56888886421 1111111 111100 0026889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTN-----F----DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||... + .+.++..+++|+.|+.++++++....
T Consensus 83 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 155 (297)
T 1xhl_A 83 VVADVT-------EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI 155 (297)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EecCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 999999 4444444443 7999999999643 2 14577899999999999999886531
Q ss_pred --cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 153 --KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 153 --~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
+ .++|++||...+....
T Consensus 156 ~~~-g~IV~isS~~~~~~~~------------------------------------------------------------ 174 (297)
T 1xhl_A 156 KTK-GEIVNVSSIVAGPQAH------------------------------------------------------------ 174 (297)
T ss_dssp HTT-CEEEEECCGGGSSSCC------------------------------------------------------------
T ss_pred hcC-CEEEEEcCchhccCCC------------------------------------------------------------
Confidence 3 6899999975543210
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcC-chHHHHHhccCceeeEEecCCCc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIR-TIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~-~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+.+.+ ..++++++++|+.|.++....... ..... ........+... ..
T Consensus 175 -~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~p 243 (297)
T 1xhl_A 175 -SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGL-PETASDKLYSFIGSRKEC---------IP 243 (297)
T ss_dssp -TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTC-CHHHHHHHHHHHHHCTTT---------CT
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccccc-ccccccchHHHHHHHHhc---------CC
Confidence 12357999999999888755 358999999999998764311100 00000 000111111111 11
Q ss_pred ccceeehhhhhhHHHHHHHhh-hcCCCCCCcEEEecCCCCCcccHHHHHH
Q 037479 305 IVDVIPADMVVNAIVVAVVAH-AKQPSDVNNIYQVGSSLRNPLIYTNLQD 353 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~-~~~~~~~~~iy~i~~~~~~~~t~~e~~~ 353 (492)
...++.++|+|++++.++... ..... ++++++.++ ..+.+.+...
T Consensus 244 ~~r~~~pedvA~~v~~l~s~~~~~~it--G~~i~vdGG--~~~~~~~~~~ 289 (297)
T 1xhl_A 244 VGHCGKPEEIANIIVFLADRNLSSYII--GQSIVADGG--STLVMGMQTH 289 (297)
T ss_dssp TSSCBCHHHHHHHHHHHHCHHHHTTCC--SCEEEESTT--GGGCCGGGGS
T ss_pred CCCCcCHHHHHHHHHHHhCCcccCCcc--CcEEEECCC--cccccccccc
Confidence 235788999999999988644 32222 889999988 4555555433
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=160.15 Aligned_cols=245 Identities=13% Similarity=0.132 Sum_probs=156.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC------HHHHHHHHhhcChhhHHHHHhcCCchhhhc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS------ATVRFHNEIIGKDLFRVLKEKNGTHLNALI 83 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~------~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (492)
+++|+||||||+|+||++++++|++.|. +|+++.|+..... ..+++. +. -..+.. .
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~---------~ 69 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGA---DIILFDICHDIETNEYPLATSRDLE-EA-----GLEVEK---------T 69 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTSCSCCCCHHHHH-HH-----HHHHHH---------T
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---eEEEEcccccccccccchhhhHHHH-HH-----HHHHHh---------c
Confidence 5789999999999999999999999996 5688888643211 012221 00 000111 1
Q ss_pred cCceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-----chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 84 SEKITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-----DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 84 ~~~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
..++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 70 ~~~~~~~~~D~~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 142 (287)
T 3pxx_A 70 GRKAYTAEVDVR-------DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPY 142 (287)
T ss_dssp TSCEEEEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CCceEEEEccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence 367899999999 4444444443 79999999997643 2567889999999999999999874
Q ss_pred c-cceeEEEeeeceeeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 152 A-KLIVLVHVSTAFVWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 152 ~-~~~~~V~vST~~v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
. +-.++|++||...+..... ...|..
T Consensus 143 ~~~~g~iv~isS~~~~~~~~~~~~~~~~---------------------------------------------------- 170 (287)
T 3pxx_A 143 LTSGASIITTGSVAGLIAAAQPPGAGGP---------------------------------------------------- 170 (287)
T ss_dssp CCTTCEEEEECCHHHHHHHHCCC---------------------------------------------------------
T ss_pred hhcCcEEEEeccchhccccccccccccc----------------------------------------------------
Confidence 2 3358999999765532210 000000
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCc---cccCc--CchHHHHHhccCceeeEEe
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPG---WAEGI--RTIDSLAVGYGKGRLTCFL 299 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~g---w~~~~--~~~~~~~~~~~~g~~~~~~ 299 (492)
.......|+.||+..+.+.+.+ ..++++..++|+.|.++.....+. +.... .......... .
T Consensus 171 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 242 (287)
T 3pxx_A 171 QGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF--------P 242 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHG--------G
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhh--------h
Confidence 0012357999999999988755 348999999999998876532110 00000 0000001000 0
Q ss_pred cCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 300 GDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 300 ~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
........+..++|+|++++.++........ |+++++.+|
T Consensus 243 ~~~~~~~~~~~p~dva~~v~fL~s~~a~~it--G~~i~vdGG 282 (287)
T 3pxx_A 243 AMQAMPTPYVEASDISNAVCFLASDESRYVT--GLQFKVDAG 282 (287)
T ss_dssp GGCSSSCSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred hhcccCCCCCCHHHHHhhHheecchhhcCCC--CceEeECch
Confidence 0111114688999999999998864433222 889999988
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.3e-17 Score=152.08 Aligned_cols=211 Identities=16% Similarity=0.166 Sum_probs=145.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|++|||||+|+||++++++|++.|+ +|+++.|+... .+.+.+ .+.++ ...++.++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~--------~~~~~~~~ 57 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGY---ALALGARSVDR---LEKIAH---------ELMQE--------QGVEVFYH 57 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHH--------HCCCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH---------HHHhh--------cCCeEEEE
Confidence 478999999999999999999999996 46888886422 111111 11111 13678999
Q ss_pred ecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--cc
Q 037479 91 PGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--KL 154 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~ 154 (492)
.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.... +-
T Consensus 58 ~~D~~-------~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 130 (235)
T 3l77_A 58 HLDVS-------KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG 130 (235)
T ss_dssp ECCTT-------CHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EeccC-------CHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999 5555555554 78999999997542 25578889999999999999886531 23
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|.+||....... ...
T Consensus 131 ~~ii~~sS~~~~~~~--------------------------------------------------------------~~~ 148 (235)
T 3l77_A 131 GLALVTTSDVSARLI--------------------------------------------------------------PYG 148 (235)
T ss_dssp CEEEEECCGGGSSCC--------------------------------------------------------------TTC
T ss_pred CcEEEEecchhcccC--------------------------------------------------------------CCc
Confidence 456666664332111 134
Q ss_pred chHHHHHHHHHHHHHHh---cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 235 NTYVFTKVMGEMFIEHL---KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~---~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
..|+.||+..+.+.+.+ ..++++..++|+.|-.+....... ......++..
T Consensus 149 ~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~--------------------------~~~~~~~~~p 202 (235)
T 3l77_A 149 GGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG--------------------------KPKEKGYLKP 202 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC--------------------------CCGGGTCBCH
T ss_pred chHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC--------------------------cccccCCCCH
Confidence 58999999999998865 468999999999987654422111 0011146789
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|+|++++.++........ +++....++
T Consensus 203 ~dva~~v~~l~~~~~~~~~--~~~~~~~~~ 230 (235)
T 3l77_A 203 DEIAEAVRCLLKLPKDVRV--EELMLRSVY 230 (235)
T ss_dssp HHHHHHHHHHHTSCTTCCC--CEEEECCTT
T ss_pred HHHHHHHHHHHcCCCCCcc--ceEEEeecc
Confidence 9999999999875443221 555555554
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=9.2e-18 Score=160.88 Aligned_cols=226 Identities=15% Similarity=0.097 Sum_probs=142.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHh-hCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILR-VQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~-~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++|+|+||||||+||++++++|++ .|+ +|+++.|+... .+.+. ..++.. ..++.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~---~V~~~~r~~~~---~~~~~---------~~l~~~---------~~~~~~ 58 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG---DVVLTARDVTR---GQAAV---------QQLQAE---------GLSPRF 58 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS---EEEEEESSHHH---HHHHH---------HHHHHT---------TCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC---eEEEEeCChHH---HHHHH---------HHHHhc---------CCeeEE
Confidence 579999999999999999999999 886 56888886321 11111 111111 246889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-cc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-KL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~ 154 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.+.. ..
T Consensus 59 ~~~Dl~-------~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 131 (276)
T 1wma_A 59 HQLDID-------DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ 131 (276)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred EECCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC
Confidence 999999 4444445554 79999999997532 25567889999999999999998752 22
Q ss_pred eeEEEeeeceeeccccc---ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 155 IVLVHVSTAFVWGEESG---MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~---~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+||++||..++....+ ...+.... .+++.+.............. .+.. ....
T Consensus 132 g~iv~~sS~~~~~~~~~~~~~~~~~~~~--------~~~~e~~~~~~~~~~~~~~~---------------~~~~-~~~~ 187 (276)
T 1wma_A 132 GRVVNVSSIMSVRALKSCSPELQQKFRS--------ETITEEELVGLMNKFVEDTK---------------KGVH-QKEG 187 (276)
T ss_dssp EEEEEECCHHHHHHHHTSCHHHHHHHHC--------SSCCHHHHHHHHHHHHHHHH---------------TTCT-TTTT
T ss_pred CEEEEECChhhhcccccCChhHHhhccc--------cccchhhhhhhhhhhhhhhc---------------cccc-ccCC
Confidence 48999999766532100 00000000 01111111111100000000 0000 0011
Q ss_pred CCCchHHHHHHHHHHHHHHh-----c----CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----K----ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~----~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.+.+.|+.||+..|.+++.+ . .++++++++|+.|.++....
T Consensus 188 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~------------------------------ 237 (276)
T 1wma_A 188 WPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP------------------------------ 237 (276)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT------------------------------
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc------------------------------
Confidence 23479999999999888754 2 58999999999987654310
Q ss_pred CcccceeehhhhhhHHHHHHHh
Q 037479 303 KGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~ 324 (492)
..+++++|+|++++.++..
T Consensus 238 ---~~~~~~~~~a~~~~~l~~~ 256 (276)
T 1wma_A 238 ---KATKSPEEGAETPVYLALL 256 (276)
T ss_dssp ---TCSBCHHHHTHHHHHHHSC
T ss_pred ---cccCChhHhhhhHhhhhcC
Confidence 1357899999999998863
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=157.13 Aligned_cols=202 Identities=12% Similarity=0.150 Sum_probs=142.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|+||||||||+||++++++|++.|+ +|+++.|+..... ..+.+
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~~-------------------------------~~~~~ 46 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGY---TVLNIDLSANDQA-------------------------------DSNIL 46 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCCTTS-------------------------------SEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEecCccccc-------------------------------cccEE
Confidence 4689999999999999999999999996 5688888754321 23567
Q ss_pred EecCCCCCCCCCCchhhHHHhc---------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc
Q 037479 90 VPGDITREDLGVKDSNLREEMW---------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~---------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (492)
+.+|++ +.+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++....
T Consensus 47 ~~~D~~-------~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 119 (236)
T 1ooe_A 47 VDGNKN-------WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHL 119 (236)
T ss_dssp CCTTSC-------HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred EeCCCC-------CHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 889999 444444443 379999999996431 24567889999999999999987642
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.-.++|++||...+...
T Consensus 120 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 137 (236)
T 1ooe_A 120 KPGGLLQLTGAAAAMGPT-------------------------------------------------------------- 137 (236)
T ss_dssp EEEEEEEEECCGGGGSCC--------------------------------------------------------------
T ss_pred ccCCEEEEECchhhccCC--------------------------------------------------------------
Confidence 22489999996544211
Q ss_pred CCCchHHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+.+.+ ..++++++++|+.|.++.... ... ...
T Consensus 138 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~---------~~~ 191 (236)
T 1ooe_A 138 PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK-----------------WMP---------NAD 191 (236)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH-----------------HST---------TCC
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhh-----------------cCC---------Ccc
Confidence 12458999999999998765 235999999999887653210 000 001
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+++.+|+|++++..+.......-. ++.+++.++
T Consensus 192 ~~~~~~~~dvA~~i~~~l~s~~~~~~~-G~~~~v~gg 227 (236)
T 1ooe_A 192 HSSWTPLSFISEHLLKWTTETSSRPSS-GALLKITTE 227 (236)
T ss_dssp GGGCBCHHHHHHHHHHHHHCGGGCCCT-TCEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHcCCCccccc-ccEEEEecC
Confidence 124578899999998666433222212 778888776
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-17 Score=157.21 Aligned_cols=222 Identities=15% Similarity=0.152 Sum_probs=145.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|..... .+...+++ .+ ...++.+
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~--~~~~~~~~---------~~---------~~~~~~~ 62 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGA---NVVLTYNGAAEG--AATAVAEI---------EK---------LGRSALA 62 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECSSCHH--HHHHHHHH---------HT---------TTSCCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCCHHH--HHHHHHHH---------Hh---------cCCceEE
Confidence 5789999999999999999999999996 456664543221 11111111 11 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA-K 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~ 153 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.... .
T Consensus 63 ~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 135 (259)
T 3edm_A 63 IKADLT-------NAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK 135 (259)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999 4444445443 79999999986511 24568889999999999999998752 1
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||...+.... ..
T Consensus 136 ~g~iv~isS~~~~~~~~-------------------------------------------------------------~~ 154 (259)
T 3edm_A 136 GGAIVTFSSQAGRDGGG-------------------------------------------------------------PG 154 (259)
T ss_dssp EEEEEEECCHHHHHCCS-------------------------------------------------------------TT
T ss_pred CCEEEEEcCHHhccCCC-------------------------------------------------------------CC
Confidence 23899999965541100 23
Q ss_pred CchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 234 PNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
...|+.||+..+.+.+.+ .+++++..+.|+.|..+....... ...... .........+.
T Consensus 155 ~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--------~~~~~~---------~~~~~p~~r~~ 217 (259)
T 3edm_A 155 ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--------PEVRER---------VAGATSLKREG 217 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------------------CCB
T ss_pred cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--------hHHHHH---------HHhcCCCCCCc
Confidence 468999999999888754 345999999999987765422110 000000 11111223567
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++|+|++++.++....... . |+++++.++
T Consensus 218 ~pedva~~v~~L~s~~~~~i-t-G~~i~vdGg 247 (259)
T 3edm_A 218 SSEDVAGLVAFLASDDAAYV-T-GACYDINGG 247 (259)
T ss_dssp CHHHHHHHHHHHHSGGGTTC-C-SCEEEESBC
T ss_pred CHHHHHHHHHHHcCccccCc-c-CCEEEECCC
Confidence 89999999999887543322 2 899999987
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-17 Score=156.94 Aligned_cols=223 Identities=12% Similarity=0.099 Sum_probs=147.0
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
....++|+||||||+|+||++++++|++.|. +|+++.|..... ..+... + ++. ...+
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~---~v~~~~~~~~~~-~~~~~~-~---------~~~---------~~~~ 64 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGF---RVVAGCGPNSPR-RVKWLE-D---------QKA---------LGFD 64 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTE---EEEEEECTTCSS-HHHHHH-H---------HHH---------TTCC
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCHHH-HHHHHH-H---------HHh---------cCCe
Confidence 3456789999999999999999999999996 456666433221 111111 1 111 1256
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC- 151 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (492)
+.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 65 ~~~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 137 (256)
T 3ezl_A 65 FYASEGNVG-------DWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGM 137 (256)
T ss_dssp CEEEECCTT-------CHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEecCCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 889999999 4444444443 78999999997642 2557889999999988887776432
Q ss_pred --ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 152 --AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 152 --~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
.+..++|++||.......
T Consensus 138 ~~~~~g~iv~isS~~~~~~~------------------------------------------------------------ 157 (256)
T 3ezl_A 138 VERGWGRIINISSVNGQKGQ------------------------------------------------------------ 157 (256)
T ss_dssp HHHTCEEEEEECCCCGGGSC------------------------------------------------------------
T ss_pred HhcCCCEEEEEcchhhccCC------------------------------------------------------------
Confidence 145689999996544221
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++...... ......+... ..
T Consensus 158 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~---------~~ 217 (256)
T 3ezl_A 158 --FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR---------PDVLEKIVAT---------IP 217 (256)
T ss_dssp --SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---------HHHHHHHHHH---------ST
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccC---------HHHHHHHHhc---------CC
Confidence 23468999999888877654 35899999999998775432111 1111111111 11
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+..++|+|++++.++........ |+++++.+|
T Consensus 218 ~~~~~~~~dva~~~~~l~s~~~~~~t--G~~i~vdgG 252 (256)
T 3ezl_A 218 VRRLGSPDEIGSIVAWLASEESGFST--GADFSLNGG 252 (256)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHhCCcccCCc--CcEEEECCC
Confidence 23467899999999988864333222 889999887
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=161.02 Aligned_cols=221 Identities=13% Similarity=0.124 Sum_probs=140.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... ..+.+.++ +.. ...++.+
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~~~ 83 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF---DIAITGIGDAE--GVAPVIAE---------LSG---------LGARVIF 83 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCHH--HHHHHHHH---------HHH---------TTCCEEE
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC---eEEEEeCCCHH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 4679999999999999999999999996 55777753221 11111111 111 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccC---------cchhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTN---------FDERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
+.+|+++ .+..+.+++ ++|++||+||... ..+.++..+++|+.|+.++++++....
T Consensus 84 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 156 (280)
T 4da9_A 84 LRADLAD-------LSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAML 156 (280)
T ss_dssp EECCTTS-------GGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999994 443444443 7999999999731 125678889999999999988876531
Q ss_pred --c---ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 153 --K---LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 153 --~---~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
+ ..++|++||.......
T Consensus 157 ~~~~~~~g~Iv~isS~~~~~~~---------------------------------------------------------- 178 (280)
T 4da9_A 157 ASDARASRSIINITSVSAVMTS---------------------------------------------------------- 178 (280)
T ss_dssp HHCCCCCEEEEEECCC----------------------------------------------------------------
T ss_pred HhCCCCCCEEEEEcchhhccCC----------------------------------------------------------
Confidence 1 3589999996554221
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|.++....... ........+ .
T Consensus 179 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---------~~~~~~~~~--------~ 237 (280)
T 4da9_A 179 ----PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG---------KYDGLIESG--------L 237 (280)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------------
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch---------hHHHHHhhc--------C
Confidence 13457999999999888755 358999999999998765432211 000000000 1
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+..++|+|++++.++........ |+++++.+|
T Consensus 238 ~p~~r~~~pedvA~~v~~L~s~~~~~it--G~~i~vdGG 274 (280)
T 4da9_A 238 VPMRRWGEPEDIGNIVAGLAGGQFGFAT--GSVIQADGG 274 (280)
T ss_dssp ----CCBCHHHHHHHHHHHHTSTTGGGT--TCEEEESTT
T ss_pred CCcCCcCCHHHHHHHHHHHhCccccCCC--CCEEEECCC
Confidence 1123467899999999998864332111 889999887
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-17 Score=156.70 Aligned_cols=220 Identities=13% Similarity=0.041 Sum_probs=147.0
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-+.+|+|+||||+|+||++++++|++.|++ |+++.+.... ..+... ..+.+. ..++.
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~---v~i~~~r~~~--~~~~~~---------~~l~~~---------~~~~~ 79 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFN---IGVHYHRDAA--GAQETL---------NAIVAN---------GGNGR 79 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHH---------HHHHHT---------TCCEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCchH--HHHHHH---------HHHHhc---------CCceE
Confidence 356899999999999999999999999964 4565543211 111111 111111 25789
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh----
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK---- 150 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~---- 150 (492)
++.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 80 ~~~~Dl~-------~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 152 (267)
T 4iiu_A 80 LLSFDVA-------NREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIG 152 (267)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCC-------CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999999 4444444443 79999999997642 246788899999999999998731
Q ss_pred cccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 151 CAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 151 ~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
..+..++|++||...+...
T Consensus 153 ~~~~g~iv~isS~~~~~~~------------------------------------------------------------- 171 (267)
T 4iiu_A 153 ARQGGRIITLSSVSGVMGN------------------------------------------------------------- 171 (267)
T ss_dssp HTSCEEEEEECCHHHHHCC-------------------------------------------------------------
T ss_pred cCCCcEEEEEcchHhccCC-------------------------------------------------------------
Confidence 1245789999996543221
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++..... .......... ...
T Consensus 172 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~---------~p~ 231 (267)
T 4iiu_A 172 -RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----------ESALKEAMSM---------IPM 231 (267)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----------HHHHHHHHHT---------CTT
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----------HHHHHHHHhc---------CCC
Confidence 23468999999776666543 3589999999999987655321 1111111111 112
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+..++|+|++++.++........ |+++++.+|
T Consensus 232 ~~~~~~edva~~~~~L~s~~~~~it--G~~i~vdGG 265 (267)
T 4iiu_A 232 KRMGQAEEVAGLASYLMSDIAGYVT--RQVISINGG 265 (267)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCCcccCcc--CCEEEeCCC
Confidence 2467899999999998875333222 889999876
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=5.5e-18 Score=162.06 Aligned_cols=229 Identities=13% Similarity=0.078 Sum_probs=148.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... .+.+. ..+.+..+ ..++.+
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~~~-------~~~~~~ 68 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA---KLSLVDVSSEG---LEASK---------AAVLETAP-------DAEVLT 68 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHHCT-------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhhcC-------CceEEE
Confidence 6889999999999999999999999996 56888886421 11111 11111110 256889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+..+++.+...
T Consensus 69 ~~~D~~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 141 (267)
T 1iy8_A 69 TVADVS-------DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE 141 (267)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999999 4444445443 68999999997533 1457788999999998777665331
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||...+...
T Consensus 142 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 159 (267)
T 1iy8_A 142 QGSGMVVNTASVGGIRGI-------------------------------------------------------------- 159 (267)
T ss_dssp HTCCEEEEECCGGGTSBC--------------------------------------------------------------
T ss_pred cCCCEEEEEcchhhccCC--------------------------------------------------------------
Confidence 145789999996543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..++++++++|+.|.++...... ....-.........+.. .....
T Consensus 160 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~---------~~p~~ 229 (267)
T 1iy8_A 160 GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM-KQLDPENPRKAAEEFIQ---------VNPSK 229 (267)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH-HHHCTTCHHHHHHHHHT---------TCTTC
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccc-cccChhhhhhHHHHHhc---------cCCCC
Confidence 12458999999999888754 35899999999999875421100 00000000100001111 01112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+..++|+|++++.++....... . ++++++.++
T Consensus 230 r~~~~~dvA~~v~~l~s~~~~~~-t-G~~i~vdGG 262 (267)
T 1iy8_A 230 RYGEAPEIAAVVAFLLSDDASYV-N-ATVVPIDGG 262 (267)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTC-C-SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcCccccCC-C-CCEEEECCC
Confidence 47889999999998886433222 2 789999887
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-17 Score=158.76 Aligned_cols=219 Identities=15% Similarity=0.121 Sum_probs=151.5
Q ss_pred cCCCEEEEeCCcch--hhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGATGF--LAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGatGf--lG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+|+||||||+ ||++++++|++.|. +|+++.|+. .. +.+. .+.++ ..++
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~---~V~~~~r~~-~~---~~~~----------~l~~~---------~~~~ 77 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGA---ELAFTYVGQ-FK---DRVE----------KLCAE---------FNPA 77 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTC---EEEEEECTT-CH---HHHH----------HHHGG---------GCCS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCC---EEEEeeCch-HH---HHHH----------HHHHh---------cCCc
Confidence 57899999999988 99999999999996 568888876 21 2221 11111 1457
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc------------chhHHHHHHHhHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF------------DERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~------------~~~~~~~~~~Nv~gt~~ll~~a 148 (492)
.++.+|++ +.+..+.++ .++|+|||+||.... .+.+...+++|+.|+.++++++
T Consensus 78 ~~~~~Dl~-------~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~ 150 (280)
T 3nrc_A 78 AVLPCDVI-------SDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEG 150 (280)
T ss_dssp EEEECCTT-------CHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eEEEeecC-------CHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999 444444444 368999999997642 2456778999999999999998
Q ss_pred Hhcc--cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 149 KKCA--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 149 ~~~~--~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
.... +-.++|++||...+...
T Consensus 151 ~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------- 173 (280)
T 3nrc_A 151 RSMMKNRNASMVALTYIGAEKAM--------------------------------------------------------- 173 (280)
T ss_dssp HHHHTTTTCEEEEEECGGGTSCC---------------------------------------------------------
T ss_pred HHHhhcCCCeEEEEeccccccCC---------------------------------------------------------
Confidence 7641 23589999996544221
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~ 301 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++...... ............
T Consensus 174 -----~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~-------- 233 (280)
T 3nrc_A 174 -----PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS-------NFKKMLDYNAMV-------- 233 (280)
T ss_dssp -----TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT-------THHHHHHHHHHH--------
T ss_pred -----CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc-------chHHHHHHHHhc--------
Confidence 23468999999999888754 35899999999999876543221 111222111111
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+..++|+|++++.++........ ++++++.+|
T Consensus 234 -~p~~~~~~pedvA~~v~~l~s~~~~~~t--G~~i~vdgG 270 (280)
T 3nrc_A 234 -SPLKKNVDIMEVGNTVAFLCSDMATGIT--GEVVHVDAG 270 (280)
T ss_dssp -STTCSCCCHHHHHHHHHHTTSGGGTTCC--SCEEEESTT
T ss_pred -CCCCCCCCHHHHHHHHHHHhCcccCCcC--CcEEEECCC
Confidence 1112467899999999998874333222 889999887
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-17 Score=159.62 Aligned_cols=221 Identities=14% Similarity=0.091 Sum_probs=147.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|. +|+++.|.... ..+....+ +.. ...++.+
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~~~ 79 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGM---AVAVSHSERND--HVSTWLMH---------ERD---------AGRDFKA 79 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEECSCHH--HHHHHHHH---------HHT---------TTCCCEE
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCchH--HHHHHHHH---------HHh---------cCCceEE
Confidence 5789999999999999999999999996 45666643321 11111100 100 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 80 ~~~Dl~-------~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 152 (269)
T 3gk3_A 80 YAVDVA-------DFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER 152 (269)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999 4444444443 79999999997632 2457788999999999999887542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 153 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 170 (269)
T 3gk3_A 153 RFGRIVNIGSVNGSRGA--------------------------------------------------------------F 170 (269)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------------T
T ss_pred CCCEEEEeCChhhccCC--------------------------------------------------------------C
Confidence 44689999996543211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|.++.....+. .... ...........
T Consensus 171 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~~~--------~~~~~~~~~~~ 233 (269)
T 3gk3_A 171 GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ---------DVLE--------AKILPQIPVGR 233 (269)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------------------CCSGGGCTTSS
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch---------hHHH--------HHhhhcCCcCC
Confidence 3468999999888877654 358999999999998765432211 0000 00011112235
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..++|+|++++.++....... . |+++++.+|
T Consensus 234 ~~~p~dvA~~v~~L~s~~~~~i-t-G~~i~vdgG 265 (269)
T 3gk3_A 234 LGRPDEVAALIAFLCSDDAGFV-T-GADLAINGG 265 (269)
T ss_dssp CBCHHHHHHHHHHHTSTTCTTC-C-SCEEEESTT
T ss_pred ccCHHHHHHHHHHHhCCCcCCe-e-CcEEEECCC
Confidence 6789999999998886433222 2 889999988
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.9e-18 Score=159.59 Aligned_cols=209 Identities=16% Similarity=0.189 Sum_probs=143.3
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++|+|+||||||+||++++++|++.|+ +|+++.|+.... +.+.
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~--------------------------------~~~~ 62 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGD---KVAITYRSGEPP--------------------------------EGFL 62 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSCCC--------------------------------TTSE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHhh--------------------------------ccce
Confidence 36789999999999999999999999996 568888865321 3367
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~~Dl~-------d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 135 (253)
T 2nm0_A 63 AVKCDIT-------DTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLR 135 (253)
T ss_dssp EEECCTT-------SHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999 4444444443 57999999997532 2467889999999999999877542
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||.......
T Consensus 136 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 153 (253)
T 2nm0_A 136 AKKGRVVLISSVVGLLGS-------------------------------------------------------------- 153 (253)
T ss_dssp HTCEEEEEECCCCCCCCH--------------------------------------------------------------
T ss_pred cCCCEEEEECchhhCCCC--------------------------------------------------------------
Confidence 145789999996543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..++++++++|+.|..+.....+ +. ....+ .. .....
T Consensus 154 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~--~~~~~----~~---------~~p~~ 215 (253)
T 2nm0_A 154 AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT---DE--QRANI----VS---------QVPLG 215 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--------------CHHHH----HT---------TCTTC
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC---HH--HHHHH----Hh---------cCCCC
Confidence 01247999999998887754 45899999999988765432110 00 00001 00 01112
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++..+|+|++++.++........ ++++.+.++
T Consensus 216 ~~~~p~dvA~~i~~l~s~~~~~~t--G~~i~vdGG 248 (253)
T 2nm0_A 216 RYARPEEIAATVRFLASDDASYIT--GAVIPVDGG 248 (253)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCccccCCc--CcEEEECCc
Confidence 478999999999998874332222 789998887
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-16 Score=152.75 Aligned_cols=220 Identities=12% Similarity=0.088 Sum_probs=149.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|.... ..+.+.++ +++ ...++.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~--~~~~~~~~---------l~~---------~~~~~~~ 85 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGA---AVALTYVNAAE--RAQAVVSE---------IEQ---------AGGRAVA 85 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 5789999999999999999999999996 44666554321 11111111 111 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-ccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-AKL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~ 154 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ..-
T Consensus 86 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 158 (271)
T 3v2g_A 86 IRADNR-------DAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG 158 (271)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT
T ss_pred EECCCC-------CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 999999 4444445444 79999999997532 2467889999999999999998764 234
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... + ...
T Consensus 159 g~iv~isS~~~~~~~--------~-----------------------------------------------------~~~ 177 (271)
T 3v2g_A 159 GRIITIGSNLAELVP--------W-----------------------------------------------------PGI 177 (271)
T ss_dssp CEEEEECCGGGTCCC--------S-----------------------------------------------------TTC
T ss_pred CEEEEEeChhhccCC--------C-----------------------------------------------------CCc
Confidence 589999884322110 0 234
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+.+.+ ..++++..++|+.|.++.....+. ......... ....+.
T Consensus 178 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~------~~~~~~~~~-------------~~~r~~ 238 (271)
T 3v2g_A 178 SLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD------HAEAQRERI-------------ATGSYG 238 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS------SHHHHHHTC-------------TTSSCB
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch------hHHHHHhcC-------------CCCCCC
Confidence 68999999999887654 358999999999998876532211 111111111 112357
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++|+|++++.++........ |+++++.+|
T Consensus 239 ~pedvA~~v~fL~s~~~~~it--G~~i~vdGG 268 (271)
T 3v2g_A 239 EPQDIAGLVAWLAGPQGKFVT--GASLTIDGG 268 (271)
T ss_dssp CHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CHHHHHHHHHHHhCcccCCcc--CCEEEeCcC
Confidence 799999999988864333222 889999887
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=161.17 Aligned_cols=230 Identities=15% Similarity=0.111 Sum_probs=149.3
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
..+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.+ .++.. ..++
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~---------~l~~~---------~~~~ 75 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGI---AVYGCARDAKN---VSAAVD---------GLRAA---------GHDV 75 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHTT---------TCCE
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH---------HHHhc---------CCcE
Confidence 345789999999999999999999999996 56888886321 111111 11111 2578
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh---
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK--- 150 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~--- 150 (492)
.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++..
T Consensus 76 ~~~~~Dv~-------d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (279)
T 3sju_A 76 DGSSCDVT-------STDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGG 148 (279)
T ss_dssp EEEECCTT-------CHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSS
T ss_pred EEEECCCC-------CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhh
Confidence 99999999 4444444443 78999999997642 245778899999999999998765
Q ss_pred c--ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 151 C--AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 151 ~--~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
+ .+..++|++||.......
T Consensus 149 ~~~~~~g~iV~isS~~~~~~~----------------------------------------------------------- 169 (279)
T 3sju_A 149 MREAGWGRIVNIASTGGKQGV----------------------------------------------------------- 169 (279)
T ss_dssp HHHHTCEEEEEECCGGGTSCC-----------------------------------------------------------
T ss_pred HhhcCCcEEEEECChhhccCC-----------------------------------------------------------
Confidence 1 134689999996544211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCC-ccccCcC-chHHHHHhccCceeeEEecC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFP-GWAEGIR-TIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~-gw~~~~~-~~~~~~~~~~~g~~~~~~~~ 301 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++...... .+..... ........+. .
T Consensus 170 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 237 (279)
T 3sju_A 170 ---MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFN---------A 237 (279)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHH---------T
T ss_pred ---CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHH---------h
Confidence 23468999999888877654 35899999999999775431100 0000000 0111111111 1
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
......+..++|+|++++.++........ |+++++.+|
T Consensus 238 ~~p~~r~~~pedvA~~v~~L~s~~a~~it--G~~i~vdGG 275 (279)
T 3sju_A 238 KIPLGRYSTPEEVAGLVGYLVTDAAASIT--AQALNVCGG 275 (279)
T ss_dssp TCTTSSCBCHHHHHHHHHHHTSSGGGGCC--SCEEEESTT
T ss_pred cCCCCCCCCHHHHHHHHHHHhCccccCcC--CcEEEECCC
Confidence 12223578899999999988864332222 889999887
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.7e-18 Score=160.27 Aligned_cols=222 Identities=17% Similarity=0.107 Sum_probs=150.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|. +|+++.|+... .+...+ .+.+. ...++.+
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~l~~~--------~~~~~~~ 74 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGA---RLVLSGRDVSE---LDAARR---------ALGEQ--------FGTDVHT 74 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHH--------HCCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH---------HHHHh--------cCCcEEE
Confidence 5789999999999999999999999996 56888885322 111111 11111 1367899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 75 ~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (266)
T 4egf_A 75 VAIDLAEP-------DAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAA 147 (266)
T ss_dssp EECCTTST-------THHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 99999953 3333433 379999999997642 24577889999999999999876531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.-.++|++||...+...
T Consensus 148 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 165 (266)
T 4egf_A 148 GEGGAIITVASAAALAPL-------------------------------------------------------------- 165 (266)
T ss_dssp TSCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred CCCeEEEEEcchhhccCC--------------------------------------------------------------
Confidence 13589999997654221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|.++...... ........+.. .....
T Consensus 166 ~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~---------~~p~~ 229 (266)
T 4egf_A 166 PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVW-------GDEAKSAPMIA---------RIPLG 229 (266)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHT-------CSHHHHHHHHT---------TCTTS
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhc-------cChHHHHHHHh---------cCCCC
Confidence 23468999999999887755 35899999999998876431110 00111111111 11123
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+..++|+|++++.++........ ++++++.++
T Consensus 230 r~~~p~dva~~v~~L~s~~~~~it--G~~i~vdGG 262 (266)
T 4egf_A 230 RFAVPHEVSDAVVWLASDAASMIN--GVDIPVDGG 262 (266)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhcCcc--CcEEEECCC
Confidence 467799999999998875433222 889999887
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.5e-18 Score=160.20 Aligned_cols=212 Identities=14% Similarity=0.189 Sum_probs=144.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|+ +|+++.|+.. ... ++ ...++.+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~-------------~~--------~~~~~~~ 56 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGA---QVVVLDIRGE------DVV-------------AD--------LGDRARF 56 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSCH------HHH-------------HH--------TCTTEEE
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCchH------HHH-------------Hh--------cCCceEE
Confidence 5789999999999999999999999996 5588888321 111 00 1367899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc------CccEEEEcccccC-----------cchhHHHHHHHhHHHHHHHHHHHHhcc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN------KLDVVINLAATTN-----------FDERYDVALDLNTFGAKHVLNFSKKCA 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~~-----------~~~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||... ..+.++..+++|+.|+.++++++....
T Consensus 57 ~~~D~~-------~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 129 (257)
T 3tl3_A 57 AAADVT-------DEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERI 129 (257)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCC-------CHHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 999999 4444445444 8999999999642 124578899999999999999887531
Q ss_pred -----------cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHh
Q 037479 153 -----------KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMK 221 (492)
Q Consensus 153 -----------~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (492)
+-.++|++||...+....
T Consensus 130 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------------------- 158 (257)
T 3tl3_A 130 AKTEPVGPNAEERGVIINTASVAAFDGQI--------------------------------------------------- 158 (257)
T ss_dssp TTSCCC--CCCCSEEEEEECCCC--CCHH---------------------------------------------------
T ss_pred HHhcccccccCCCcEEEEEcchhhcCCCC---------------------------------------------------
Confidence 234799999966542210
Q ss_pred hhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceee
Q 037479 222 DLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLT 296 (492)
Q Consensus 222 ~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~ 296 (492)
....|+.||+..+.+.+.+ ..++++..++|+.|..+.....+ ......+....
T Consensus 159 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~-- 216 (257)
T 3tl3_A 159 -----------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP---------EEARASLGKQV-- 216 (257)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C---------HHHHHHHHHTS--
T ss_pred -----------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc---------HHHHHHHHhcC--
Confidence 1247999999888777654 45899999999999776542211 11111111100
Q ss_pred EEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 297 CFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 297 ~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+..++|+|++++.++.. .... |+++++.+|
T Consensus 217 ------~~~~r~~~p~dva~~v~~l~s~-~~it---G~~i~vdGG 251 (257)
T 3tl3_A 217 ------PHPSRLGNPDEYGALAVHIIEN-PMLN---GEVIRLDGA 251 (257)
T ss_dssp ------SSSCSCBCHHHHHHHHHHHHHC-TTCC---SCEEEESTT
T ss_pred ------CCCCCccCHHHHHHHHHHHhcC-CCCC---CCEEEECCC
Confidence 0012478899999999999874 2222 889999888
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=160.10 Aligned_cols=231 Identities=14% Similarity=0.120 Sum_probs=151.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... .+.+.++ +....+ ...++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~~------~~~~~~~ 62 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGA---NVTITGRSSER---LEETRQI---------ILKSGV------SEKQVNS 62 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHTTTC------CGGGEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHHcCC------CCcceEE
Confidence 5789999999999999999999999996 56888886421 1111111 111000 0126889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~Dv~-------~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 135 (280)
T 1xkq_A 63 VVADVT-------TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 135 (280)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999 4444444443 69999999996532 1357788999999999999988753
Q ss_pred c---cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 152 A---KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 152 ~---~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
. + .++|++||...+....
T Consensus 136 ~~~~~-g~iv~isS~~~~~~~~---------------------------------------------------------- 156 (280)
T 1xkq_A 136 LVASK-GEIVNVSSIVAGPQAQ---------------------------------------------------------- 156 (280)
T ss_dssp HHHHT-CEEEEECCGGGSSSCC----------------------------------------------------------
T ss_pred hhcCC-CcEEEecCccccCCCC----------------------------------------------------------
Confidence 1 2 6899999975543210
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..|.+.+.+ ..++++++++|+.|.++.......+-............+... .
T Consensus 157 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 224 (280)
T 1xkq_A 157 ---PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC---------I 224 (280)
T ss_dssp ---CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT---------C
T ss_pred ---CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC---------C
Confidence 12357999999999888765 358999999999998864321100000000000111111111 1
Q ss_pred cccceeehhhhhhHHHHHHHhh-hcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAH-AKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~-~~~~~~~~~iy~i~~~ 341 (492)
....+..++|+|++++.++... ..... ++++++.++
T Consensus 225 p~~~~~~pedvA~~v~~l~s~~~~~~~t--G~~i~vdgG 261 (280)
T 1xkq_A 225 PIGAAGKPEHIANIILFLADRNLSFYIL--GQSIVADGG 261 (280)
T ss_dssp TTSSCBCHHHHHHHHHHHHCHHHHTTCC--SCEEEESTT
T ss_pred CCCCCCCHHHHHHHHHHhcCcccccCcc--CCeEEECCC
Confidence 1235789999999999988643 32222 889999887
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-17 Score=155.95 Aligned_cols=225 Identities=13% Similarity=0.110 Sum_probs=149.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+++||||+|+||++++++|++.|+ +|+++.|+..... .+.+.++ ++. ...++.++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~-~~~~~~~---------~~~---------~~~~~~~~~ 59 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF---DIAVADLPQQEEQ-AAETIKL---------IEA---------ADQKAVFVG 59 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEECGGGHHH-HHHHHHH---------HHT---------TTCCEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcchHH-HHHHHHH---------HHh---------cCCcEEEEE
Confidence 68999999999999999999999996 5688888653200 1111111 111 025688999
Q ss_pred cCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---ccc
Q 037479 92 GDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AKL 154 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~ 154 (492)
+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+.
T Consensus 60 ~Dv~-------~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 132 (258)
T 3a28_C 60 LDVT-------DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGV 132 (258)
T ss_dssp CCTT-------CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred ccCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC
Confidence 9999 4444444443 79999999997543 2457788999999999999988653 144
Q ss_pred -eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 155 -IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 155 -~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
.++|++||...+... ..
T Consensus 133 ~g~iv~isS~~~~~~~--------------------------------------------------------------~~ 150 (258)
T 3a28_C 133 KGKIINAASIAAIQGF--------------------------------------------------------------PI 150 (258)
T ss_dssp CCEEEEECCGGGTSCC--------------------------------------------------------------TT
T ss_pred CcEEEEECcchhccCC--------------------------------------------------------------CC
Confidence 689999996544211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCc-----CchHHHHHhccCceeeEEecCCC
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGI-----RTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~-----~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
...|+.||+..|.+.+.+ ..++++.+++|+.|.++.... +.... .........+.. ..
T Consensus 151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~---------~~ 218 (258)
T 3a28_C 151 LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ---IDAELSKINGKPIGENFKEYSS---------SI 218 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH---HHHHHHHHHCCCTTHHHHHHHT---------TC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh---hhhhhccccCCchHHHHHHHHh---------cC
Confidence 458999999999888755 358999999999987653210 00000 000011111111 01
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+..++|+|++++.++........ ++++++.++
T Consensus 219 p~~r~~~p~dvA~~v~~l~s~~~~~~t--G~~i~vdGG 254 (258)
T 3a28_C 219 ALGRPSVPEDVAGLVSFLASENSNYVT--GQVMLVDGG 254 (258)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESSS
T ss_pred CCCCccCHHHHHHHHHHHhCcccCCCC--CCEEEECCC
Confidence 112478899999999998864332222 789999887
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=158.33 Aligned_cols=218 Identities=17% Similarity=0.180 Sum_probs=148.5
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-+++|+++||||+|+||++++++|++.|. +|+++.|+... .+.+. ++ +..++.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~ 55 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGA---TVIVSDINAEG---AKAAA-------------AS--------IGKKAR 55 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCHHH---HHHHH-------------HH--------HCTTEE
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------hCCceE
Confidence 36799999999999999999999999996 55777775321 11111 11 136788
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH----h
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK----K 150 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~----~ 150 (492)
++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++. +
T Consensus 56 ~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 128 (247)
T 3rwb_A 56 AIAADIS-------DPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRA 128 (247)
T ss_dssp ECCCCTT-------CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEcCCC-------CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999 4444445443 79999999997543 24578899999999999988853 3
Q ss_pred cccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 151 CAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 151 ~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+...++|++||.......
T Consensus 129 ~~~~g~iv~isS~~~~~~~------------------------------------------------------------- 147 (247)
T 3rwb_A 129 AGKAGRVISIASNTFFAGT------------------------------------------------------------- 147 (247)
T ss_dssp HTCCEEEEEECCTHHHHTC-------------------------------------------------------------
T ss_pred cCCCcEEEEECchhhccCC-------------------------------------------------------------
Confidence 2225689999996544221
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|.++.....+. .....+... . ...
T Consensus 148 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~-~-----------~~~ 209 (247)
T 3rwb_A 148 -PNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH-----NEAFGFVEM-L-----------QAM 209 (247)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGG-----GGGHHHHHH-H-----------SSS
T ss_pred -CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccCh-----hHHHHHHhc-c-----------ccc
Confidence 23468999998888877654 358999999999988754322110 000111111 0 011
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+...+|+|+++..++........ |+++++.+|
T Consensus 210 ~r~~~pedva~~v~~L~s~~~~~it--G~~i~vdGG 243 (247)
T 3rwb_A 210 KGKGQPEHIADVVSFLASDDARWIT--GQTLNVDAG 243 (247)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCccccCCC--CCEEEECCC
Confidence 2356789999999998875433222 889999887
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=160.63 Aligned_cols=220 Identities=13% Similarity=0.150 Sum_probs=147.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+|+||||+|+||++++++|++.|+ +|+++.|+... .+.+.+++ . . ..++.+
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~~---~~~~~~~l-------------~----~--~~~~~~ 81 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA---RVFICARDAEA---CADTATRL-------------S----A--YGDCQA 81 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCHHH---HHHHHHHH-------------T----T--SSCEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH-------------H----h--cCceEE
Confidence 5789999999999999999999999996 56888875421 11111111 0 0 126888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++....
T Consensus 82 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 154 (276)
T 2b4q_A 82 IPADLS-------SEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRS 154 (276)
T ss_dssp CCCCTT-------SHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999 4444444443 79999999996532 24578899999999988888765321
Q ss_pred cc----eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 153 KL----IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 153 ~~----~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
+. .++|++||...+...
T Consensus 155 ~~~~~~g~iV~isS~~~~~~~----------------------------------------------------------- 175 (276)
T 2b4q_A 155 ASAENPARVINIGSVAGISAM----------------------------------------------------------- 175 (276)
T ss_dssp CCSSSCEEEEEECCGGGTCCC-----------------------------------------------------------
T ss_pred cCCCCCCEEEEECCHHHcCCC-----------------------------------------------------------
Confidence 22 789999997654321
Q ss_pred ccCCCCc-hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 229 KIYGWPN-TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 229 ~~~~~~n-~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.... .|+.||+..|.+.+.+ ..++++++++|+.|.++.... +.. .....+... ..
T Consensus 176 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~------~~~~~~~~~-------~~ 236 (276)
T 2b4q_A 176 ---GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH---IAN------DPQALEADS-------AS 236 (276)
T ss_dssp ---CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH---HHH------CHHHHHHHH-------HT
T ss_pred ---CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh---cch------hHHHHHHhh-------cC
Confidence 1123 7999999999988765 358999999999988754311 000 000000000 00
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+..++|+|++++.++........ ++++++.++
T Consensus 237 ~p~~r~~~p~dvA~~v~~l~s~~~~~~t--G~~i~vdGG 273 (276)
T 2b4q_A 237 IPMGRWGRPEEMAALAISLAGTAGAYMT--GNVIPIDGG 273 (276)
T ss_dssp STTSSCCCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCCcCCHHHHHHHHHHHhCccccCCC--CCEEEeCCC
Confidence 1112478899999999998874332222 789999876
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.2e-17 Score=154.73 Aligned_cols=225 Identities=16% Similarity=0.145 Sum_probs=147.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+++||||+|+||++++++|++.|..+ +|++..|+... .+.+. ++ ...++.++.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~---~~~~~-------------~~--------~~~~~~~~~ 56 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAP---LKKLK-------------EK--------YGDRFFYVV 56 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHH---HHHHH-------------HH--------HGGGEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHH---HHHHH-------------HH--------hCCceEEEE
Confidence 6899999999999999999999997543 56777775321 11111 11 125789999
Q ss_pred cCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc--cc
Q 037479 92 GDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA--KL 154 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~ 154 (492)
+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.... +-
T Consensus 57 ~Dv~-------~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~ 129 (254)
T 3kzv_A 57 GDIT-------EDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN 129 (254)
T ss_dssp SCTT-------SHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCC-------CHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 9999 4444445443 78999999997532 24578899999999999999884311 11
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||...+... ...
T Consensus 130 g~iv~isS~~~~~~~--------------------------------------------------------------~~~ 147 (254)
T 3kzv_A 130 GNVVFVSSDACNMYF--------------------------------------------------------------SSW 147 (254)
T ss_dssp CEEEEECCSCCCCSS--------------------------------------------------------------CCS
T ss_pred CeEEEEcCchhccCC--------------------------------------------------------------CCc
Confidence 689999996554321 234
Q ss_pred chHHHHHHHHHHHHHHh---cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 235 NTYVFTKVMGEMFIEHL---KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~---~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
..|+.||+..+.+.+.+ ..++++..++|+.|.++.....................+... .....+..+
T Consensus 148 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~r~~~p 218 (254)
T 3kzv_A 148 GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGL---------KENNQLLDS 218 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHH---------HTTC----C
T ss_pred chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHH---------HhcCCcCCc
Confidence 68999999999988765 258999999999998876543322111000011111111110 112247889
Q ss_pred hhhhhHHHHHHHhhh-cCCCCCCcEEEecCC
Q 037479 312 DMVVNAIVVAVVAHA-KQPSDVNNIYQVGSS 341 (492)
Q Consensus 312 ddva~~ii~~~~~~~-~~~~~~~~iy~i~~~ 341 (492)
+|+|++++.++.... .... |+++++.++
T Consensus 219 ~dva~~v~~L~s~~~~~~it--G~~i~vdg~ 247 (254)
T 3kzv_A 219 SVPATVYAKLALHGIPDGVN--GQYLSYNDP 247 (254)
T ss_dssp HHHHHHHHHHHHHCCCGGGT--TCEEETTCG
T ss_pred ccHHHHHHHHHhhcccCCCC--ccEEEecCc
Confidence 999999999887542 2221 788988776
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=157.93 Aligned_cols=197 Identities=13% Similarity=0.078 Sum_probs=142.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|+||||+|+||++++++|++.|+ +|+++.|+..... -..+.
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~~~---------------------------------~~~~~ 65 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSW---NTISIDFRENPNA---------------------------------DHSFT 65 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCTTS---------------------------------SEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCccccc---------------------------------ccceE
Confidence 68999999999999999999999996 5688998765321 13467
Q ss_pred cCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-cce
Q 037479 92 GDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA-KLI 155 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~ 155 (492)
+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.... .-.
T Consensus 66 ~d~~-------d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g 138 (251)
T 3orf_A 66 IKDS-------GEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGG 138 (251)
T ss_dssp CSCS-------SHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred EEeC-------CHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCC
Confidence 7877 4444444443 57999999996421 24567889999999999999987642 224
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
++|++||...+... ....
T Consensus 139 ~iv~isS~~~~~~~--------------------------------------------------------------~~~~ 156 (251)
T 3orf_A 139 LFVLTGASAALNRT--------------------------------------------------------------SGMI 156 (251)
T ss_dssp EEEEECCGGGGSCC--------------------------------------------------------------TTBH
T ss_pred EEEEEechhhccCC--------------------------------------------------------------CCCc
Confidence 89999997654221 2346
Q ss_pred hHHHHHHHHHHHHHHh--c-----CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 236 TYVFTKVMGEMFIEHL--K-----ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~--~-----~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
.|+.||+..|.+.+.+ . .++++.+++|+.|.++... ... .......+
T Consensus 157 ~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~-----------------~~~---------~~~~~~~~ 210 (251)
T 3orf_A 157 AYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNR-----------------KYM---------SDANFDDW 210 (251)
T ss_dssp HHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHH-----------------HHC---------TTSCGGGS
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchh-----------------hhc---------cccccccc
Confidence 8999999999998865 2 4799999999988654321 100 11123467
Q ss_pred eehhhhhhHHHHHHHh-hhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVA-HAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~-~~~~~~~~~~iy~i~~~ 341 (492)
++++|+|++++.++.. ..... . |+++++.++
T Consensus 211 ~~~~dva~~i~~l~~~~~~~~~-t-G~~i~v~~g 242 (251)
T 3orf_A 211 TPLSEVAEKLFEWSTNSDSRPT-N-GSLVKFETK 242 (251)
T ss_dssp BCHHHHHHHHHHHHHCGGGCCC-T-TCEEEEEEE
T ss_pred CCHHHHHHHHHHHhcCccccCC-c-ceEEEEecC
Confidence 8899999999999985 32222 2 889998876
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.9e-18 Score=163.51 Aligned_cols=226 Identities=15% Similarity=0.147 Sum_probs=148.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+|+||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ +..++.+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 66 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGA---TVIMAVRDTRK---GEAAA-------------RT--------MAGQVEV 66 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------TT--------SSSEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------HH--------hcCCeeE
Confidence 5789999999999999999999999996 56888886422 11111 11 1357899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc---CccEEEEcccccCc-----chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEee
Q 037479 90 VPGDITREDLGVKDSNLREEMWN---KLDVVINLAATTNF-----DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVS 161 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vS 161 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ..+++|++|
T Consensus 67 ~~~Dl~-------d~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~is 138 (291)
T 3rd5_A 67 RELDLQ-------DLSSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVS 138 (291)
T ss_dssp EECCTT-------CHHHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEEC
T ss_pred EEcCCC-------CHHHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEee
Confidence 999999 5555556665 68999999997542 2456788999999999999999886 456999999
Q ss_pred eceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHH
Q 037479 162 TAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241 (492)
Q Consensus 162 T~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK 241 (492)
|...+..... ....... . ....+...|+.||
T Consensus 139 S~~~~~~~~~---~~~~~~~-----~-----------------------------------------~~~~~~~~Y~~sK 169 (291)
T 3rd5_A 139 SMAHWPGRIN---LEDLNWR-----S-----------------------------------------RRYSPWLAYSQSK 169 (291)
T ss_dssp CGGGTTCCCC---SSCTTCS-----S-----------------------------------------SCCCHHHHHHHHH
T ss_pred chhhccCCCC---ccccccc-----c-----------------------------------------cCCCCcchHHHHH
Confidence 9766543210 0000000 0 0012335899999
Q ss_pred HHHHHHHHHh-----cCC--CcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhh
Q 037479 242 VMGEMFIEHL-----KEN--MSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 242 ~~aE~~v~~~-----~~~--~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddv 314 (492)
+..+.+.+.+ ..+ +++..++|+.|..+.....+.. ...... .. ....-..+++++
T Consensus 170 ~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~---------~~~~~~-----~~----~~~~~~~~~~~~ 231 (291)
T 3rd5_A 170 LANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK---------LGDALM-----SA----ATRVVATDADFG 231 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------------------CHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH---------HHHHHH-----HH----HHHHHhCCHHHH
Confidence 9999888755 234 9999999999977654321110 000000 00 011123458999
Q ss_pred hhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 315 VNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 315 a~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
|++++.++... ... |+.+++.++
T Consensus 232 A~~~~~l~~~~--~~~--G~~~~vdgG 254 (291)
T 3rd5_A 232 ARQTLYAASQD--LPG--DSFVGPRFG 254 (291)
T ss_dssp HHHHHHHHHSC--CCT--TCEEEETTS
T ss_pred HHHHHHHHcCC--CCC--CceeCCccc
Confidence 99999998852 222 788888765
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-17 Score=158.18 Aligned_cols=226 Identities=12% Similarity=0.060 Sum_probs=146.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+++||||||+||++++++|++.|+ +|+++.|+... .+.+.+ .+... ..++.++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~---------~~~~~~~~ 57 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF---AVAIADYNDAT---AKAVAS---------EINQA---------GGHAVAVK 57 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHT---------TCCEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH---------HHHhc---------CCcEEEEE
Confidence 68999999999999999999999996 56888886421 111111 11111 24688899
Q ss_pred cCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---c-
Q 037479 92 GDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---K- 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~- 153 (492)
+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.... +
T Consensus 58 ~D~~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 130 (256)
T 1geg_A 58 VDVS-------DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH 130 (256)
T ss_dssp CCTT-------SHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred ecCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 9999 4444445544 79999999996532 24567889999999999888776531 2
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||...+... ..
T Consensus 131 ~g~iv~isS~~~~~~~--------------------------------------------------------------~~ 148 (256)
T 1geg_A 131 GGKIINACSQAGHVGN--------------------------------------------------------------PE 148 (256)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------------TT
T ss_pred CCEEEEECchhhcCCC--------------------------------------------------------------CC
Confidence 4689999986543211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCc-cccCc-CchHHHHHhccCceeeEEecCCCccc
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPG-WAEGI-RTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~g-w~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
...|+.||+..|.+.+.+ ..++++++++|+.|.++....... +.... .........+.. .....
T Consensus 149 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~ 219 (256)
T 1geg_A 149 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK---------RITLG 219 (256)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHT---------TCTTC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHh---------cCCCC
Confidence 357999999998888754 358999999999988753210000 00000 000000001110 01122
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+..++|+|++++.++........ ++++++.++
T Consensus 220 r~~~p~dvA~~v~~l~s~~~~~~t--G~~i~vdGG 252 (256)
T 1geg_A 220 RLSEPEDVAACVSYLASPDSDYMT--GQSLLIDGG 252 (256)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESSS
T ss_pred CCcCHHHHHHHHHHHhCccccCCC--CCEEEeCCC
Confidence 478999999999998864332222 789999887
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=5.6e-17 Score=155.91 Aligned_cols=235 Identities=13% Similarity=0.129 Sum_probs=152.0
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC-------HHHHHHHHhhcChhhHHHHHhcCCchhh
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS-------ATVRFHNEIIGKDLFRVLKEKNGTHLNA 81 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~-------~~~r~~~~~~~~~~f~~l~~~~~~~~~~ 81 (492)
-+++|++|||||+|+||++++++|++.|. +|+++.|..+... ..+++.. . ...+..
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~-------- 70 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA---DIIAVDIAGKLPSCVPYDPASPDDLSE-T-----VRLVEA-------- 70 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCCTTCCSCCCCHHHHHH-H-----HHHHHH--------
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeccccccccccccccCHHHHHH-H-----HHHHHh--------
Confidence 46789999999999999999999999996 5588888533111 1122221 0 011111
Q ss_pred hccCceEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHH
Q 037479 82 LISEKITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
...++.++.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.+++++
T Consensus 71 -~~~~~~~~~~D~~-------~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 142 (277)
T 3tsc_A 71 -ANRRIVAAVVDTR-------DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMA 142 (277)
T ss_dssp -TTCCEEEEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred -cCCeEEEEECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHH
Confidence 1267899999999 444444444 369999999997643 246788899999999999988
Q ss_pred HHhcc----cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhh
Q 037479 148 SKKCA----KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDL 223 (492)
Q Consensus 148 a~~~~----~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (492)
+.... .-.++|++||...+...
T Consensus 143 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 168 (277)
T 3tsc_A 143 GAPRIIEGGRGGSIILISSAAGMKMQ------------------------------------------------------ 168 (277)
T ss_dssp HHHHHHHHTSCEEEEEECCGGGTSCC------------------------------------------------------
T ss_pred HHHHHHhcCCCCEEEEEccHhhCCCC------------------------------------------------------
Confidence 65421 13589999996544221
Q ss_pred hccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc-CceeeE
Q 037479 224 GIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG-KGRLTC 297 (492)
Q Consensus 224 ~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~-~g~~~~ 297 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|.++.... ........... ......
T Consensus 169 --------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~ 232 (277)
T 3tsc_A 169 --------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG--------DMVTAVGQAMETNPQLSH 232 (277)
T ss_dssp --------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH--------HHHHHHHHHHHTCGGGTT
T ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc--------hhhhhhhhcccccHHHHH
Confidence 13457999999999888755 358999999999998764321 00000000000 000000
Q ss_pred EecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 298 FLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 298 ~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...... ..-+..++|+|++++.++........ |+++++.+|
T Consensus 233 ~~~~~~-p~r~~~pedvA~~v~~L~s~~~~~it--G~~i~vdGG 273 (277)
T 3tsc_A 233 VLTPFL-PDWVAEPEDIADTVCWLASDESRKVT--AAQIPVDQG 273 (277)
T ss_dssp TTCCSS-SCSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred Hhhhcc-CCCCCCHHHHHHHHHHHhCccccCCc--CCEEeeCCC
Confidence 000111 11378899999999998875433222 889999887
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-17 Score=159.21 Aligned_cols=224 Identities=14% Similarity=0.124 Sum_probs=151.2
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++|++|||||+|+||++++++|++.|. +|+++.|+... .+... ..+... ...++.
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~--------~~~~~~ 80 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC---HTVIASRSLPR---VLTAA---------RKLAGA--------TGRRCL 80 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESCHHH---HHHHH---------HHHHHH--------HSSCEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHHh--------cCCcEE
Confidence 36899999999999999999999999996 56888886422 11111 111111 126789
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 81 ~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 153 (277)
T 4fc7_A 81 PLSMDVR-------APPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFR 153 (277)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHH
T ss_pred EEEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999 4444444443 79999999996432 2567889999999999999987532
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||.......
T Consensus 154 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 171 (277)
T 4fc7_A 154 DHGGVIVNITATLGNRGQ-------------------------------------------------------------- 171 (277)
T ss_dssp HHCEEEEEECCSHHHHTC--------------------------------------------------------------
T ss_pred cCCCEEEEECchhhCCCC--------------------------------------------------------------
Confidence 134689999996544221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|.++... ............... .....
T Consensus 172 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~------~~~~~~~~~~~~~~~---------~~p~~ 236 (277)
T 4fc7_A 172 ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGL------RRLGGPQASLSTKVT---------ASPLQ 236 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHH------HHHSCCHHHHHHHHH---------TSTTS
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhh------hhccCCHHHHHHHhc---------cCCCC
Confidence 23468999999999888755 35899999999999875310 000001111111111 11122
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+..++|+|++++.++........ |+++++.+|
T Consensus 237 r~~~p~dvA~~v~fL~s~~~~~it--G~~i~vdGG 269 (277)
T 4fc7_A 237 RLGNKTEIAHSVLYLASPLASYVT--GAVLVADGG 269 (277)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcCCccCCcC--CCEEEECCC
Confidence 467899999999998874333222 889999988
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.4e-17 Score=157.85 Aligned_cols=228 Identities=15% Similarity=0.088 Sum_probs=149.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.+++. . ...++.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~l~---------~---------~~~~~~~ 81 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV---TVGALGRTRTE---VEEVADEIV---------G---------AGGQAIA 81 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHHHT---------T---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHHH---------h---------cCCcEEE
Confidence 4678999999999999999999999996 56888886422 222221110 0 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 82 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 154 (283)
T 3v8b_A 82 LEADVS-------DELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ 154 (283)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999 4444444443 79999999997532 2457889999999999999988321
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||........ .
T Consensus 155 ~~~g~Iv~isS~~~~~~~~------------------------------------------------------------~ 174 (283)
T 3v8b_A 155 RGGGAIVVVSSINGTRTFT------------------------------------------------------------T 174 (283)
T ss_dssp HTCEEEEEECCSBTTTBCC------------------------------------------------------------S
T ss_pred cCCceEEEEcChhhccCCC------------------------------------------------------------C
Confidence 1457899999965432100 0
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc-
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI- 305 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~- 305 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|..+....... .. ........ .........
T Consensus 175 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~------~~-~~~~~~~~----~~~~~~~p~~ 243 (283)
T 3v8b_A 175 PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKL------RH-EEETAIPV----EWPKGQVPIT 243 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTB------CC-HHHHSCCC----BCTTCSCGGG
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccc------cc-chhhhhhh----hhhhhcCccc
Confidence 23468999999999988765 358999999999998765432110 00 00000000 000001111
Q ss_pred -cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 -VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 -~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+...+|+|++++.++........ |+++++.+|
T Consensus 244 ~~r~~~pedvA~~v~fL~s~~a~~it--G~~i~vdGG 278 (283)
T 3v8b_A 244 DGQPGRSEDVAELIRFLVSERARHVT--GSPVWIDGG 278 (283)
T ss_dssp TTCCBCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred cCCCCCHHHHHHHHHHHcCccccCCc--CCEEEECcC
Confidence 2456789999999998874433222 889999887
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=6e-17 Score=157.19 Aligned_cols=220 Identities=13% Similarity=0.083 Sum_probs=152.3
Q ss_pred cCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++||||+| +||++++++|++.|. +|+++.|+... .+.+. .+.++ ..++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~---~V~~~~r~~~~---~~~~~----------~~~~~---------~~~~ 82 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA---EVALTYLSETF---KKRVD----------PLAES---------LGVK 82 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGG---HHHHH----------HHHHH---------HTCC
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHH----------HHHHh---------cCCe
Confidence 5789999999998 999999999999996 56888887432 22221 11111 1346
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
.++.+|++ +.+..+.+++ ++|++||+||.... .+.+...+++|+.|+.++++++.
T Consensus 83 ~~~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 155 (296)
T 3k31_A 83 LTVPCDVS-------DAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAE 155 (296)
T ss_dssp EEEECCTT-------CHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999 4444445543 68999999997532 24578899999999999999987
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... .-.++|++||.......
T Consensus 156 ~~m~~~g~IV~isS~~~~~~~----------------------------------------------------------- 176 (296)
T 3k31_A 156 PLMTNGGSILTLSYYGAEKVV----------------------------------------------------------- 176 (296)
T ss_dssp GGCTTCEEEEEEECGGGTSCC-----------------------------------------------------------
T ss_pred HHhhcCCEEEEEEehhhccCC-----------------------------------------------------------
Confidence 642 23589999996544211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|.++...... ............ .
T Consensus 177 ---~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~---------~ 237 (296)
T 3k31_A 177 ---PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS-------DFHYILTWNKYN---------S 237 (296)
T ss_dssp ---TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH-------HHHHHHHHHHHH---------S
T ss_pred ---CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc-------chHHHHHHHHhc---------C
Confidence 23468999999999888765 35899999999999886543211 111111111110 0
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+...+|+|++++.++........ |+++++.+|
T Consensus 238 p~~r~~~pedvA~~v~fL~s~~a~~it--G~~i~vdGG 273 (296)
T 3k31_A 238 PLRRNTTLDDVGGAALYLLSDLGRGTT--GETVHVDCG 273 (296)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCCCCHHHHHHHHHHHcCCccCCcc--CCEEEECCC
Confidence 112456789999999999875333222 889999988
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.8e-17 Score=157.19 Aligned_cols=234 Identities=15% Similarity=0.131 Sum_probs=151.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|+ +|+++.|+... .+.. ...+....+ ...+..
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~---------~~~l~~~~~-------~~~~~~ 65 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA---NVLINGRREEN---VNET---------IKEIRAQYP-------DAILQP 65 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHH---------HHHHHHHCT-------TCEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHH---------HHHHHhhCC-------CceEEE
Confidence 5789999999999999999999999996 56888886422 1111 112222211 256788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cccee
Q 037479 90 VPGDITREDLGVKDSNLREEMWN---KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AKLIV 156 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~ 156 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+..+
T Consensus 66 ~~~D~~-------~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~ 138 (267)
T 3t4x_A 66 VVADLG-------TEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGR 138 (267)
T ss_dssp EECCTT-------SHHHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEE
T ss_pred EecCCC-------CHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCE
Confidence 999999 4444445444 79999999997542 2457788999999988887766442 14568
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|++||...+... .....
T Consensus 139 iv~isS~~~~~~~--------------------------------------------------------------~~~~~ 156 (267)
T 3t4x_A 139 VIFIASEAAIMPS--------------------------------------------------------------QEMAH 156 (267)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------------TTCHH
T ss_pred EEEEcchhhccCC--------------------------------------------------------------CcchH
Confidence 9999996544211 23468
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCC-ccccCc-CchHHHHHhccCceeeEEecCCCccccee
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFP-GWAEGI-RTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~-gw~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
|+.||+..+.+.+.+ ..++++..++|+.|.++...... ...... ............... .......+.
T Consensus 157 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~r~~ 231 (267)
T 3t4x_A 157 YSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR-----PTSIIQRLI 231 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC-----TTCSSCSCB
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC-----CcccccCcc
Confidence 999999999988765 34799999999998765321000 000000 000111111110000 011223678
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++|+|++++.++........ |+++++.+|
T Consensus 232 ~pedvA~~v~fL~s~~~~~it--G~~i~vdGG 261 (267)
T 3t4x_A 232 RPEEIAHLVTFLSSPLSSAIN--GSALRIDGG 261 (267)
T ss_dssp CTHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CHHHHHHHHHHHcCccccCcc--CCeEEECCC
Confidence 999999999998874333222 889999988
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.5e-18 Score=162.35 Aligned_cols=233 Identities=9% Similarity=0.014 Sum_probs=141.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+||||||+||++++++|++.|+ +|+++.|+..... . .+.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~~-------------------------------~---~~~~ 44 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGH---QIVGIDIRDAEVI-------------------------------A---DLST 44 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSSEE-------------------------------C---CTTS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCchhhc-------------------------------c---cccc
Confidence 6899999999999999999999996 5688888754210 1 1567
Q ss_pred CCCCCCCCCCchhhHHHhcc----CccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc---ccceeEEEeeecee
Q 037479 93 DITREDLGVKDSNLREEMWN----KLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKC---AKLIVLVHVSTAFV 165 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~----~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~V~vST~~v 165 (492)
|++ +.+..+.+++ ++|+|||+||.......++..+++|+.|+.++++++... .+..++|++||...
T Consensus 45 Dl~-------~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 117 (257)
T 1fjh_A 45 AEG-------RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS 117 (257)
T ss_dssp HHH-------HHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CCC-------CHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence 777 5555555554 569999999986634568899999999999999988642 14578999999876
Q ss_pred eccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 166 WGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 166 ~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
+..... ...+..+. ..+.+........ .........|+.||+..
T Consensus 118 ~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~-----~~~~~~~~~Y~~sK~a~ 162 (257)
T 1fjh_A 118 AHLAFDKNPLALALE------------------------------AGEEAKARAIVEH-----AGEQGGNLAYAGSKNAL 162 (257)
T ss_dssp GSSCGGGCTTHHHHH------------------------------HTCHHHHHHHHHT-----CCTTHHHHHHHHHHHHH
T ss_pred hccccccchhhhhhc------------------------------ccchhhhhhhhhc-----ccCCCCccHHHHHHHHH
Confidence 632110 00000000 0000110000000 00011235899999999
Q ss_pred HHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHH
Q 037479 245 EMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 245 E~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii 319 (492)
|.+.+.+ ..++++++++|+.|.++..... .. ....... ...+ ......+++++|+|++++
T Consensus 163 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~-----~~~~~~~----~~~~---~~~~~~~~~~~dvA~~~~ 227 (257)
T 1fjh_A 163 TVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG---LQ-----DPRYGES----IAKF---VPPMGRRAEPSEMASVIA 227 (257)
T ss_dssp HHHHHHTHHHHHHTTCEEEEEEECC---------------------------------C---CCSTTSCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh---cc-----chhHHHH----HHhc---ccccCCCCCHHHHHHHHH
Confidence 9988765 3589999999999987654221 00 0000000 0000 111124789999999999
Q ss_pred HHHHhhhcCCCCCCcEEEecCC
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++....... . |+++++.++
T Consensus 228 ~l~~~~~~~~-t-G~~~~vdgG 247 (257)
T 1fjh_A 228 FLMSPAASYV-H-GAQIVIDGG 247 (257)
T ss_dssp HHTSGGGTTC-C-SCEEEESTT
T ss_pred HHhCchhcCC-c-CCEEEECCC
Confidence 9887433222 2 789999887
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=9.2e-18 Score=160.76 Aligned_cols=225 Identities=15% Similarity=0.086 Sum_probs=149.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... .+.+. ++ ..++.+
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 58 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGA---RVVICDKDESG---GRALE-------------QE---------LPGAVF 58 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH---------CTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH---------hcCCeE
Confidence 6789999999999999999999999996 56888885321 11111 11 134788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc--c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC--A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 59 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 131 (270)
T 1yde_A 59 ILCDVT-------QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 131 (270)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999 4444445443 78999999997532 1446788999999999999988642 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||....... .
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 149 (270)
T 1yde_A 132 SQGNVINISSLVGAIGQ--------------------------------------------------------------A 149 (270)
T ss_dssp HTCEEEEECCHHHHHCC--------------------------------------------------------------T
T ss_pred CCCEEEEEcCccccCCC--------------------------------------------------------------C
Confidence 24689999996433111 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..|.+.+.+ ..++++.++||+.|.++...... .........+..... ......
T Consensus 150 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~---------~~p~~r 217 (270)
T 1yde_A 150 QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA---ALMPDPRASIREGML---------AQPLGR 217 (270)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH---TTSSSHHHHHHHHHH---------TSTTSS
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhh---hcccchHHHHHHHhh---------cCCCCC
Confidence 2357999999999988765 35899999999999886421100 000000011110000 001123
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccH
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIY 348 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~ 348 (492)
+...+|+|++++.++.. .... . ++++++.++ ..+.+
T Consensus 218 ~~~p~dva~~v~~L~s~-~~~i-t-G~~i~vdGG--~~~~~ 253 (270)
T 1yde_A 218 MGQPAEVGAAAVFLASE-ANFC-T-GIELLVTGG--AELGY 253 (270)
T ss_dssp CBCHHHHHHHHHHHHHH-CTTC-C-SCEEEESTT--TTSCC
T ss_pred CcCHHHHHHHHHHHccc-CCCc-C-CCEEEECCC--eeccc
Confidence 57899999999988874 2222 2 889999988 44444
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=160.08 Aligned_cols=201 Identities=18% Similarity=0.188 Sum_probs=139.2
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-+.+|+||||||+|+||++++++|++.|.+ |+++.|+.. ++. .....++.
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~------~~~---------------------~~~~~~~~ 62 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGHP---LLLLARRVE------RLK---------------------ALNLPNTL 62 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCHH------HHH---------------------TTCCTTEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHH---------------------HhhcCCce
Confidence 357899999999999999999999999974 578888532 221 01124688
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 135 (266)
T 3p19_A 63 CAQVDVT-------DKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKA 135 (266)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCC-------CHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 9999999 4444444443 79999999997532 2457788999999999988876431
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..++|++||...+...
T Consensus 136 ~~~g~IV~isS~~~~~~~-------------------------------------------------------------- 153 (266)
T 3p19_A 136 RNCGTIINISSIAGKKTF-------------------------------------------------------------- 153 (266)
T ss_dssp HTCCEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred cCCcEEEEEcChhhCCCC--------------------------------------------------------------
Confidence 145689999996544221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++...... . ......+.... ....
T Consensus 154 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------~-~~~~~~~~~~~--------~~~~ 217 (266)
T 3p19_A 154 PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT-------S-QQIKDGYDAWR--------VDMG 217 (266)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS-------C-HHHHHHHHHHH--------HHTT
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc-------c-hhhhHHHHhhc--------cccc
Confidence 23468999999999887755 35899999999999876542211 0 01110000000 0112
Q ss_pred ceeehhhhhhHHHHHHHh
Q 037479 307 DVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~ 324 (492)
.++.++|||++++.++..
T Consensus 218 r~~~pedvA~av~~l~~~ 235 (266)
T 3p19_A 218 GVLAADDVARAVLFAYQQ 235 (266)
T ss_dssp CCBCHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHcC
Confidence 478899999999999874
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=7.1e-18 Score=160.88 Aligned_cols=215 Identities=18% Similarity=0.144 Sum_probs=148.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||||+||++++++|++.|+ +|+++.|+.. ++. + +.++ +..++.+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~-~---------~~~~--------~~~~~~~ 56 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGA---SLVAVDREER------LLA-E---------AVAA--------LEAEAIA 56 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH-H---------HHHT--------CCSSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHH-H---------HHHH--------hcCceEE
Confidence 5789999999999999999999999996 5688888632 111 0 1111 1246889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-cc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-KL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~ 154 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.... +.
T Consensus 57 ~~~D~~-------~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 129 (263)
T 2a4k_A 57 VVADVS-------DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 129 (263)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 999999 4444444443 57999999997542 24567889999999999999987642 13
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||...++.. ..
T Consensus 130 g~iv~isS~~~~~~~---------------------------------------------------------------~~ 146 (263)
T 2a4k_A 130 GSLVLTGSVAGLGAF---------------------------------------------------------------GL 146 (263)
T ss_dssp CEEEEECCCTTCCHH---------------------------------------------------------------HH
T ss_pred CEEEEEecchhcCCC---------------------------------------------------------------Cc
Confidence 589999997655210 12
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+.+.. ..++++++++|+.|.++.....+ ......+... .....++
T Consensus 147 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~---------~p~~~~~ 208 (263)
T 2a4k_A 147 AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP---------PWAWEQEVGA---------SPLGRAG 208 (263)
T ss_dssp HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC---------HHHHHHHHHT---------STTCSCB
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC---------HHHHHHHHhc---------CCCCCCc
Confidence 47999999777776544 45899999999999887542211 1111111110 0112468
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+|+|++++.++....... . ++++++.++
T Consensus 209 ~p~dvA~~v~~l~s~~~~~~-t-G~~i~vdgG 238 (263)
T 2a4k_A 209 RPEEVAQAALFLLSEESAYI-T-GQALYVDGG 238 (263)
T ss_dssp CHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CHHHHHHHHHHHhCccccCC-c-CCEEEECCC
Confidence 89999999999887433222 2 789999887
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-17 Score=155.58 Aligned_cols=201 Identities=11% Similarity=0.066 Sum_probs=142.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.++|+|+||||+|+||++++++|++.|+ +|+++.|+..... .....
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~-------------------------------~~~~~ 50 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNW---WVASIDVVENEEA-------------------------------SASVI 50 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSCCTTS-------------------------------SEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCChhhcc-------------------------------CCcEE
Confidence 3589999999999999999999999996 5688888754321 23567
Q ss_pred EecCCCCCCCCCCchhhHHHhc---------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc
Q 037479 90 VPGDITREDLGVKDSNLREEMW---------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~---------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (492)
+.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 51 ~~~D~~-------~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 123 (241)
T 1dhr_A 51 VKMTDS-------FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL 123 (241)
T ss_dssp CCCCSC-------HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 889999 544444444 379999999996431 14567889999999999999987642
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.-.++|++||...+...
T Consensus 124 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 141 (241)
T 1dhr_A 124 KEGGLLTLAGAKAALDGT-------------------------------------------------------------- 141 (241)
T ss_dssp EEEEEEEEECCGGGGSCC--------------------------------------------------------------
T ss_pred ccCCEEEEECCHHHccCC--------------------------------------------------------------
Confidence 22589999997554321
Q ss_pred CCCchHHHHHHHHHHHHHHh----c---CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL----K---ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~----~---~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+.+.+ . .++++++++|+.|-.+.... ... ...
T Consensus 142 ~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~-----------------~~~---------~~~ 195 (241)
T 1dhr_A 142 PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRK-----------------SMP---------EAD 195 (241)
T ss_dssp TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHH-----------------HST---------TSC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccc-----------------cCc---------chh
Confidence 12358999999999998865 2 36999999999876542110 000 011
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+|.+|+|++++.++....... . ++.+++.++
T Consensus 196 ~~~~~~~~~vA~~v~~l~~~~~~~~-~-G~~~~v~g~ 230 (241)
T 1dhr_A 196 FSSWTPLEFLVETFHDWITGNKRPN-S-GSLIQVVTT 230 (241)
T ss_dssp GGGSEEHHHHHHHHHHHHTTTTCCC-T-TCEEEEEEE
T ss_pred hccCCCHHHHHHHHHHHhcCCCcCc-c-ceEEEEeCC
Confidence 2246789999999998886432222 2 788888765
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-17 Score=155.37 Aligned_cols=216 Identities=13% Similarity=0.102 Sum_probs=145.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+++||||||+||++++++|++.|+ +|+++.|+... +.++ + ++..+.
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~---~V~~~~r~~~~------~~~~---------------------~--~~~~~~ 49 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGY---RVAIASRNPEE------AAQS---------------------L--GAVPLP 49 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHH------HHHH---------------------H--TCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH------HHHh---------------------h--CcEEEe
Confidence 68999999999999999999999996 56888886432 1100 0 267889
Q ss_pred cCCCCCCCCCCchhhHHH---hccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---ccceeEE
Q 037479 92 GDITREDLGVKDSNLREE---MWNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AKLIVLV 158 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~---~~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~V 158 (492)
+|+++ +- ..+..+. .+.++|++||+||.... .+.++..+++|+.|+.++++.+... .+..++|
T Consensus 50 ~D~~~-~~---~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv 125 (239)
T 2ekp_A 50 TDLEK-DD---PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVL 125 (239)
T ss_dssp CCTTT-SC---HHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCch-HH---HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 99995 21 1111222 23479999999997532 2457889999999999999887532 1467999
Q ss_pred EeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHH
Q 037479 159 HVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238 (492)
Q Consensus 159 ~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~ 238 (492)
++||...+.... + .....|+
T Consensus 126 ~isS~~~~~~~~--------~----------------------------------------------------~~~~~Y~ 145 (239)
T 2ekp_A 126 FIGSVTTFTAGG--------P----------------------------------------------------VPIPAYT 145 (239)
T ss_dssp EECCGGGTSCCT--------T----------------------------------------------------SCCHHHH
T ss_pred EECchhhccCCC--------C----------------------------------------------------CCCccHH
Confidence 999976553210 0 1346899
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 239 FTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 239 ~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
.||+..|.+.+.+ ..+++++++||+.|.++...... ........+.. ......+...+|
T Consensus 146 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~---------~~p~~~~~~~~d 209 (239)
T 2ekp_A 146 TAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLR-------QNPELYEPITA---------RIPMGRWARPEE 209 (239)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-------TCHHHHHHHHT---------TCTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccc-------cCHHHHHHHHh---------cCCCCCCcCHHH
Confidence 9999999888755 34899999999999876432100 00111111111 011124688999
Q ss_pred hhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 314 VVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 314 va~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|++++.++....... . ++++++.++
T Consensus 210 vA~~~~~l~s~~~~~~-t-G~~~~vdgG 235 (239)
T 2ekp_A 210 IARVAAVLCGDEAEYL-T-GQAVAVDGG 235 (239)
T ss_dssp HHHHHHHHTSGGGTTC-C-SCEEEESTT
T ss_pred HHHHHHHHcCchhcCC-C-CCEEEECCC
Confidence 9999998886433222 2 788998876
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-17 Score=156.99 Aligned_cols=223 Identities=13% Similarity=0.090 Sum_probs=148.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|. +|+++.|+...... +.+++ .. ...++..
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~---~~~~~---------~~---------~~~~~~~ 86 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGA---HVILHGVKPGSTAA---VQQRI---------IA---------SGGTAQE 86 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSTTTTHH---HHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCHHHHHH---HHHHH---------Hh---------cCCeEEE
Confidence 6789999999999999999999999996 56888886544321 11111 11 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhc------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
+.+|++++ +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 87 ~~~Dv~~~-------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 159 (275)
T 4imr_A 87 LAGDLSEA-------GAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK 159 (275)
T ss_dssp EECCTTST-------THHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCH-------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99999953 3333333 379999999996432 2457788999999999999987432 14
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||...+... ..
T Consensus 160 ~g~Iv~isS~~~~~~~--------------------------------------------------------------~~ 177 (275)
T 4imr_A 160 WGRVVSIGSINQLRPK--------------------------------------------------------------SV 177 (275)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------------TT
T ss_pred CcEEEEECCHHhCCCC--------------------------------------------------------------CC
Confidence 4689999996544211 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+.+.+ ..++++..++|+.|..+...... .........+.... ....-+
T Consensus 178 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~~~~~--------~p~~r~ 243 (275)
T 4imr_A 178 VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRR------AQDPEGWDEYVRTL--------NWMGRA 243 (275)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHH------HHCHHHHHHHHHHH--------STTCSC
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccccc------ccChHHHHHHHhhc--------CccCCC
Confidence 457999999999888755 34899999999998765321100 00001111111000 011135
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+|+|++++.++........ |+++++.+|
T Consensus 244 ~~pedvA~~v~fL~s~~a~~it--G~~i~vdGG 274 (275)
T 4imr_A 244 GRPEEMVGAALFLASEACSFMT--GETIFLTGG 274 (275)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCC--SCEEEESSC
T ss_pred cCHHHHHHHHHHHcCcccCCCC--CCEEEeCCC
Confidence 6789999999998875433222 889998876
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.1e-17 Score=157.16 Aligned_cols=202 Identities=15% Similarity=0.116 Sum_probs=133.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.+|++|||||+|+||++++++|++.|. +|+++.|+... .+.+. ++ +..++.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 78 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGY---GVALAGRRLDA---LQETA-------------AE--------IGDDALC 78 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH--------HTSCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------HH--------hCCCeEE
Confidence 4679999999999999999999999996 56888886321 11111 11 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 79 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 151 (272)
T 4dyv_A 79 VPTDVT-------DPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKA 151 (272)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 999999 5544545544 79999999997532 24578899999999999888775531
Q ss_pred -c--ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 153 -K--LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 153 -~--~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
+ -.++|++||...+...
T Consensus 152 ~~~~~g~IV~isS~~~~~~~------------------------------------------------------------ 171 (272)
T 4dyv_A 152 QEPRGGRIINNGSISATSPR------------------------------------------------------------ 171 (272)
T ss_dssp SSSCCEEEEEECCSSTTSCC------------------------------------------------------------
T ss_pred CCCCCcEEEEECchhhcCCC------------------------------------------------------------
Confidence 1 3589999996544211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|..+....... . .... . ....
T Consensus 172 --~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~---~~~~--------~-----~~~~ 230 (272)
T 4dyv_A 172 --PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKA---G---VPQA--------D-----LSIK 230 (272)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------------------
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcc---c---chhh--------h-----hccc
Confidence 23468999999999988755 358999999999988765422110 0 0000 0 0011
Q ss_pred ccceeehhhhhhHHHHHHHhhh
Q 037479 305 IVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~ 326 (492)
...++.++|+|++++.++..+.
T Consensus 231 ~~~~~~pedvA~~v~fL~s~~~ 252 (272)
T 4dyv_A 231 VEPVMDVAHVASAVVYMASLPL 252 (272)
T ss_dssp -----CHHHHHHHHHHHHHSCT
T ss_pred ccCCCCHHHHHHHHHHHhCCCC
Confidence 1246789999999999998543
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.1e-17 Score=153.41 Aligned_cols=204 Identities=11% Similarity=0.059 Sum_probs=132.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|. +|+++.|+.... +.+.++ +++. ..++.+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 60 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF---TVFAGRRNGEKL---APLVAE---------IEAA---------GGRIVA 60 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC---EEEEEESSGGGG---HHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHH---------HHhc---------CCeEEE
Confidence 5789999999999999999999999996 568888865432 222111 1111 257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 61 ~~~Dv~-------~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 133 (252)
T 3h7a_A 61 RSLDAR-------NEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG 133 (252)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EECcCC-------CHHHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 999999 4544545554 68999999997542 2457888999999999998877432 13
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||....... ..
T Consensus 134 ~g~iv~isS~~~~~~~--------------------------------------------------------------~~ 151 (252)
T 3h7a_A 134 QGKIFFTGATASLRGG--------------------------------------------------------------SG 151 (252)
T ss_dssp CEEEEEEEEGGGTCCC--------------------------------------------------------------TT
T ss_pred CcEEEEECCHHHcCCC--------------------------------------------------------------CC
Confidence 4689999996543211 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcE-EEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSV-AIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~-~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
...|+.||+..+.+.+.+ ..++++ .++.|+.|..+...... . ..... ........
T Consensus 152 ~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~---~------~~~~~---------~~~~~~~~- 212 (252)
T 3h7a_A 152 FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR---E------QMFGK---------DALANPDL- 212 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------------
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc---h------hhhhh---------hhhcCCcc-
Confidence 468999999999887755 358999 89999988765442110 0 00000 00111122
Q ss_pred eeehhhhhhHHHHHHHhh
Q 037479 308 VIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~ 325 (492)
++.++|+|++++.++...
T Consensus 213 ~~~pedvA~~~~~l~s~~ 230 (252)
T 3h7a_A 213 LMPPAAVAGAYWQLYQQP 230 (252)
T ss_dssp -CCHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHhCc
Confidence 789999999999998743
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-16 Score=151.69 Aligned_cols=236 Identities=14% Similarity=0.113 Sum_probs=153.4
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC----------HHHHHHHHhhcChhhHHHHHhcCCc
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS----------ATVRFHNEIIGKDLFRVLKEKNGTH 78 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~----------~~~r~~~~~~~~~~f~~l~~~~~~~ 78 (492)
-+++|+++||||+|+||++++++|++.|. +|+++.|++.... ..+++. ++ .+.+..
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~----- 73 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA---DIIAVDICKPIRAGVVDTAIPASTPEDLA-ET-----ADLVKG----- 73 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCSBTTBCCCSSCCCCHHHHH-HH-----HHHHHT-----
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeccccccccccccccccCCHHHHH-HH-----HHHHhh-----
Confidence 46799999999999999999999999996 5588888643211 122222 11 001111
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHH
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKH 143 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ 143 (492)
...++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.+
T Consensus 74 ----~~~~~~~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 142 (286)
T 3uve_A 74 ----HNRRIVTAEVDVR-------DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWK 142 (286)
T ss_dssp ----TTCCEEEEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred ----cCCceEEEEcCCC-------CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHH
Confidence 1257899999999 4444444443 79999999997532 24577899999999999
Q ss_pred HHHHHHhcc----cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHH
Q 037479 144 VLNFSKKCA----KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLA 219 (492)
Q Consensus 144 ll~~a~~~~----~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (492)
+++++.... .-.++|++||...+...
T Consensus 143 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------------- 172 (286)
T 3uve_A 143 TVKAGVPHMIAGGRGGSIILTSSVGGLKAY-------------------------------------------------- 172 (286)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------------------------------------------------
T ss_pred HHHHHHHHHHhCCCCcEEEEECchhhccCC--------------------------------------------------
Confidence 999876531 13589999996544221
Q ss_pred HhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCc---cccCc--CchHHHHHh
Q 037479 220 MKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPG---WAEGI--RTIDSLAVG 289 (492)
Q Consensus 220 ~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~g---w~~~~--~~~~~~~~~ 289 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|..+....... +.... ....... .
T Consensus 173 ------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (286)
T 3uve_A 173 ------------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA-P 239 (286)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH-H
T ss_pred ------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHH-H
Confidence 23468999999998888755 358999999999998775432000 00000 0000000 0
Q ss_pred ccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 290 YGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 290 ~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
... ..... ...+...+|+|++++.++........ |+++++.+|
T Consensus 240 ~~~------~~~~~-p~r~~~p~dvA~~v~fL~s~~a~~it--G~~i~vdGG 282 (286)
T 3uve_A 240 ICQ------MFHTL-PIPWVEPIDISNAVLFFASDEARYIT--GVTLPIDAG 282 (286)
T ss_dssp HHH------TTCSS-SCSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred HHH------hhhcc-CCCcCCHHHHHHHHHHHcCccccCCc--CCEEeECCc
Confidence 000 00011 13578899999999998874433222 889999887
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-18 Score=161.13 Aligned_cols=194 Identities=13% Similarity=0.131 Sum_probs=137.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|+ +|+++.|+... .+.+.+ .++.. ..++.+
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~~---------~l~~~---------~~~~~~ 84 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKS---KLVLWDINKHG---LEETAA---------KCKGL---------GAKVHT 84 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHT---------TCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEEcCHHH---HHHHHH---------HHHhc---------CCeEEE
Confidence 6789999999999999999999999996 56888886421 111111 11111 257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 85 ~~~Dl~-------~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 157 (272)
T 1yb1_A 85 FVVDCS-------NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN 157 (272)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEeeCC-------CHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999 4444444443 78999999997543 1456788999999988887776432 2
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..+||++||..++....
T Consensus 158 ~~~~iv~isS~~~~~~~~-------------------------------------------------------------- 175 (272)
T 1yb1_A 158 NHGHIVTVASAAGHVSVP-------------------------------------------------------------- 175 (272)
T ss_dssp TCEEEEEECCCC-CCCHH--------------------------------------------------------------
T ss_pred CCCEEEEEechhhcCCCC--------------------------------------------------------------
Confidence 567999999976553210
Q ss_pred CCchHHHHHHHHHHHHHHh--------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 233 WPNTYVFTKVMGEMFIEHL--------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~--------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
....|+.||+..|.+++.+ ..+++++++||+.|.++.... .. ..
T Consensus 176 ~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~---------~~-------------------~~ 227 (272)
T 1yb1_A 176 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---------PS-------------------TS 227 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---------TH-------------------HH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc---------cc-------------------cc
Confidence 1257999999999888754 237999999999988765310 00 00
Q ss_pred ccceeehhhhhhHHHHHHHh
Q 037479 305 IVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~ 324 (492)
...+++++|+|++++.++..
T Consensus 228 ~~~~~~~~dva~~i~~~~~~ 247 (272)
T 1yb1_A 228 LGPTLEPEEVVNRLMHGILT 247 (272)
T ss_dssp HCCCCCHHHHHHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHHHc
Confidence 12468899999999998873
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-16 Score=157.11 Aligned_cols=236 Identities=14% Similarity=0.120 Sum_probs=152.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC------HHHHHHHHhhcChhhHHHHHhcCCchhhhc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS------ATVRFHNEIIGKDLFRVLKEKNGTHLNALI 83 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~------~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|...... ..+++.. . ...+.. .
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~---~Vv~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~---------~ 105 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGA---DIVAIDLCRQQPNLDYAQGSPEELKE-T-----VRLVEE---------Q 105 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECCCCCTTCCSCCCCHHHHHH-H-----HHHHHH---------T
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---eEEEEecccccccccccccCHHHHHH-H-----HHHHHh---------c
Confidence 5789999999999999999999999996 5577777633211 1222221 1 011111 1
Q ss_pred cCceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 84 SEKITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 84 ~~~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
..++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 106 ~~~~~~~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 178 (317)
T 3oec_A 106 GRRIIARQADVR-------DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVL 178 (317)
T ss_dssp TCCEEEEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCeEEEEECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 257899999999 4444445443 79999999997642 25678899999999999999885
Q ss_pred hcc----cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhc
Q 037479 150 KCA----KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGI 225 (492)
Q Consensus 150 ~~~----~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (492)
... .-.++|++||...+...
T Consensus 179 ~~m~~~~~~g~Iv~isS~~~~~~~-------------------------------------------------------- 202 (317)
T 3oec_A 179 PSMIERGQGGSVIFVSSTVGLRGA-------------------------------------------------------- 202 (317)
T ss_dssp HHHHHTCSCEEEEEECCGGGSSCC--------------------------------------------------------
T ss_pred HHHHHcCCCCEEEEECcHHhcCCC--------------------------------------------------------
Confidence 431 23579999996544221
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCC---ccccCcCch-HHHHHhccCceee
Q 037479 226 KRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFP---GWAEGIRTI-DSLAVGYGKGRLT 296 (492)
Q Consensus 226 ~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~---gw~~~~~~~-~~~~~~~~~g~~~ 296 (492)
.....|+.||+..+.+.+.+ ..|+++..|+|+.|.++...... .+....... ..-......
T Consensus 203 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 272 (317)
T 3oec_A 203 ------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFS---- 272 (317)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHT----
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHh----
Confidence 12358999999999888765 35899999999999876431100 000000000 000000000
Q ss_pred EEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 297 CFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 297 ~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
........++.++|||++++.++........ |+++++.+|
T Consensus 273 ---~~~~~p~~~~~pedvA~av~fL~s~~a~~it--G~~i~vdGG 312 (317)
T 3oec_A 273 ---QLTLLPIPWVEPEDVSNAVAWLASDEARYIH--GAAIPVDGG 312 (317)
T ss_dssp ---TTCSSSSSSBCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred ---hhccCCCCCCCHHHHHHHHHHHcCCcccCCC--CCEEEECcc
Confidence 0011114678999999999988864333222 889999887
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.4e-17 Score=155.30 Aligned_cols=196 Identities=15% Similarity=0.173 Sum_probs=134.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||+|+||++++++|++.|. +|+++.|+... .+.+.++ +.+ ...++.+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~~ 82 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGA---RVVLTARDVEK---LRAVERE---------IVA---------AGGEAES 82 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHH---------TTCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHH---------hCCceeE
Confidence 5689999999999999999999999996 56888886422 1111111 111 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+.+|++ +.+....+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 83 ~~~D~~-------~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 155 (262)
T 3rkr_A 83 HACDLS-------HSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIA 155 (262)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 999999 4444444443 58999999997311 2457788999999999999987542
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+..+||++||...+...
T Consensus 156 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 173 (262)
T 3rkr_A 156 AKRGHIINISSLAGKNPV-------------------------------------------------------------- 173 (262)
T ss_dssp TTCCEEEEECSSCSSCCC--------------------------------------------------------------
T ss_pred CCCceEEEEechhhcCCC--------------------------------------------------------------
Confidence 145689999996544221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|..+...... ......
T Consensus 174 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------------------------~~~~~~ 227 (262)
T 3rkr_A 174 ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS--------------------------AKKSAL 227 (262)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------------
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc--------------------------cccccc
Confidence 23468999999999888755 35899999999988765432110 001122
Q ss_pred ceeehhhhhhHHHHHHHh
Q 037479 307 DVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~ 324 (492)
.++..+|+|++++.++..
T Consensus 228 ~~~~p~dvA~~v~~l~s~ 245 (262)
T 3rkr_A 228 GAIEPDDIADVVALLATQ 245 (262)
T ss_dssp -CCCHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHhcC
Confidence 467899999999998874
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1e-17 Score=160.52 Aligned_cols=231 Identities=15% Similarity=0.129 Sum_probs=150.9
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-+++|++|||||+|+||++++++|++.|. +|+++.|.... ..+.+.+++ +. ...++.
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~ 71 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGA---KVVVNYANSTK--DAEKVVSEI---------KA---------LGSDAI 71 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHH---------HH---------TTCCEE
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCCHH--HHHHHHHHH---------Hh---------cCCcEE
Confidence 36789999999999999999999999996 44666664321 111211111 11 126789
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-c
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-K 153 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~ 153 (492)
++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.... .
T Consensus 72 ~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 144 (270)
T 3is3_A 72 AIKADIR-------QVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE 144 (270)
T ss_dssp EEECCTT-------SHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT
T ss_pred EEEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Confidence 9999999 4444444443 78999999997643 25678899999999999999987642 2
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||....... ...
T Consensus 145 ~g~iv~isS~~~~~~~-------------------------------------------------------------~~~ 163 (270)
T 3is3_A 145 GGRIVLTSSNTSKDFS-------------------------------------------------------------VPK 163 (270)
T ss_dssp TCEEEEECCTTTTTCC-------------------------------------------------------------CTT
T ss_pred CCeEEEEeCchhccCC-------------------------------------------------------------CCC
Confidence 2489999995421100 023
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCC-ccccCc--CchHHHHHhccCceeeEEecCCCcc
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFP-GWAEGI--RTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~-gw~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
...|+.||+..+.+.+.+ ..++++..++|+.|.++...... .+.... ............ ....
T Consensus 164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~ 234 (270)
T 3is3_A 164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAH---------ASPL 234 (270)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHH---------HSTT
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHh---------cCCC
Confidence 468999999999988765 35899999999999876532100 000000 001111111110 1112
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+..++|+|++++.++........ |+++++.+|
T Consensus 235 ~r~~~p~dvA~~v~~L~s~~~~~it--G~~i~vdGG 268 (270)
T 3is3_A 235 HRNGWPQDVANVVGFLVSKEGEWVN--GKVLTLDGG 268 (270)
T ss_dssp CSCBCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred CCCCCHHHHHHHHHHHcCCccCCcc--CcEEEeCCC
Confidence 2467799999999998864333222 889999887
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-17 Score=155.22 Aligned_cols=226 Identities=18% Similarity=0.166 Sum_probs=150.8
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.-+++|++|||||+|+||++++++|++.|....+|++..|+... .+.+.+ .+....+ ..++
T Consensus 29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~---~~~~~~---------~l~~~~~-------~~~~ 89 (287)
T 3rku_A 29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK---LEELKK---------TIDQEFP-------NAKV 89 (287)
T ss_dssp HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHH---HHHHHH---------HHHHHCT-------TCEE
T ss_pred hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHH---HHHHHH---------HHHhhCC-------CCeE
Confidence 44789999999999999999999999998754477888886432 122111 1222111 2578
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc-
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC- 151 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (492)
.++.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 90 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 162 (287)
T 3rku_A 90 HVAQLDITQ-------AEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIF 162 (287)
T ss_dssp EEEECCTTC-------GGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999995 444444443 68999999997531 2567889999999999999988431
Q ss_pred --ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 152 --AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 152 --~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
.+..++|++||.......
T Consensus 163 ~~~~~g~IV~isS~~~~~~~------------------------------------------------------------ 182 (287)
T 3rku_A 163 QAKNSGDIVNLGSIAGRDAY------------------------------------------------------------ 182 (287)
T ss_dssp HHHTCCEEEEECCGGGTSCC------------------------------------------------------------
T ss_pred HhcCCCeEEEECChhhcCCC------------------------------------------------------------
Confidence 145689999996543211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|..+.... ...............
T Consensus 183 --~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~------~~~~~~~~~~~~~~~----------- 243 (287)
T 3rku_A 183 --PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLV------RYRGNEEQAKNVYKD----------- 243 (287)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHH------HTTTCHHHHHHHHTT-----------
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccc------cccCcHHHHHHhhcc-----------
Confidence 23468999999999888765 358999999999998753210 000000111111110
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+.++|||++++.++....... . ++++.+.++
T Consensus 244 -~~p~~pedvA~~v~~l~s~~~~~i-~-g~~i~v~~g 277 (287)
T 3rku_A 244 -TTPLMADDVADLIVYATSRKQNTV-I-ADTLIFPTN 277 (287)
T ss_dssp -SCCEEHHHHHHHHHHHHTSCTTEE-E-EEEEEEETT
T ss_pred -cCCCCHHHHHHHHHHHhCCCCCeE-e-cceEEeeCC
Confidence 012378999999999987433211 1 677888776
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-16 Score=151.97 Aligned_cols=236 Identities=16% Similarity=0.154 Sum_probs=153.4
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC------HHHHHHHHhhcChhhHHHHHhcCCchhhh
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS------ATVRFHNEIIGKDLFRVLKEKNGTHLNAL 82 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~------~~~r~~~~~~~~~~f~~l~~~~~~~~~~~ 82 (492)
-+++|++|||||+|+||++++++|++.|. +|+++.|++.... ..+++.. . ...+..
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~--------- 86 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGA---DIIAIDVCKQLDGVKLPMSTPDDLAE-T-----VRQVEA--------- 86 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCCSCCCCHHHHHH-H-----HHHHHH---------
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEecccccccccccccCHHHHHH-H-----HHHHHh---------
Confidence 46789999999999999999999999996 5588888643210 0122220 0 011111
Q ss_pred ccCceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHH
Q 037479 83 ISEKITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
...++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.+++++
T Consensus 87 ~~~~~~~~~~Dv~-------~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 159 (299)
T 3t7c_A 87 LGRRIIASQVDVR-------DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARV 159 (299)
T ss_dssp TTCCEEEEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cCCceEEEECCCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHH
Confidence 1367899999999 4444444443 79999999996532 245788999999999999998
Q ss_pred HHhc----ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhh
Q 037479 148 SKKC----AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDL 223 (492)
Q Consensus 148 a~~~----~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (492)
+... ++..++|++||...+...
T Consensus 160 ~~~~~~~~~~~g~Iv~isS~~~~~~~------------------------------------------------------ 185 (299)
T 3t7c_A 160 AIPHIMAGKRGGSIVFTSSIGGLRGA------------------------------------------------------ 185 (299)
T ss_dssp HHHHHHHTTSCEEEEEECCGGGTSCC------------------------------------------------------
T ss_pred HHHHHHhcCCCcEEEEECChhhccCC------------------------------------------------------
Confidence 7543 234689999996544221
Q ss_pred hccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCc---cccCc--CchHHHHHhccCc
Q 037479 224 GIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPG---WAEGI--RTIDSLAVGYGKG 293 (492)
Q Consensus 224 ~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~g---w~~~~--~~~~~~~~~~~~g 293 (492)
.....|+.||+..+.+.+.+ ..|+++..|+|+.|.++.....+. +.... ...........
T Consensus 186 --------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 255 (299)
T 3t7c_A 186 --------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR-- 255 (299)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH--
T ss_pred --------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhh--
Confidence 23468999999999888755 348999999999998875432100 00000 00000000000
Q ss_pred eeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 294 RLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 294 ~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
. ..... ..+..++|+|++++.++........ |+++++.+|
T Consensus 256 ~-----~~~~p-~r~~~pedvA~~v~fL~s~~a~~it--G~~i~vdGG 295 (299)
T 3t7c_A 256 Q-----MHVLP-IPYVEPADISNAILFLVSDDARYIT--GVSLPVDGG 295 (299)
T ss_dssp H-----HSSSS-CSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred h-----hcccC-cCCCCHHHHHHHHHHHhCcccccCc--CCEEeeCCC
Confidence 0 00001 3477899999999999875433222 889999887
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-18 Score=158.51 Aligned_cols=211 Identities=19% Similarity=0.183 Sum_probs=127.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++ |. +|+++.|+... .+.+. + ..++.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~---~v~~~~r~~~~---~~~~~-------------~----------~~~~~~ 52 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DH---IVYALGRNPEH---LAALA-------------E----------IEGVEP 52 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TS---EEEEEESCHHH---HHHHH-------------T----------STTEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CC---eEEEEeCCHHH---HHHHH-------------h----------hcCCcc
Confidence 4689999999999999999999988 64 56888885321 11111 0 146888
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcc--cceeEEEe
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCA--KLIVLVHV 160 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~~V~v 160 (492)
+.+|++++..--...+.. ..+.++|+|||+||..... +.++..+++|+.|+.++++.+.... +-.++|++
T Consensus 53 ~~~D~~~~~~~~~~~~~~-~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~i 131 (245)
T 3e9n_A 53 IESDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYI 131 (245)
T ss_dssp EECCHHHHHHTSSSCGGG-TTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred eecccchHHHHHHHHHHH-HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEE
Confidence 999988542100001111 2234799999999976431 4567889999999888888775421 12589999
Q ss_pred eeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 161 STAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 161 ST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
||...+... .....|+.|
T Consensus 132 sS~~~~~~~--------------------------------------------------------------~~~~~Y~as 149 (245)
T 3e9n_A 132 NSGAGNGPH--------------------------------------------------------------PGNTIYAAS 149 (245)
T ss_dssp C------------------------------------------------------------------------CHHHHHH
T ss_pred cCcccccCC--------------------------------------------------------------CCchHHHHH
Confidence 997655321 134689999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhh
Q 037479 241 KVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVV 315 (492)
Q Consensus 241 K~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva 315 (492)
|+..|.+.+.+ ..++++.+++|+.|.++...... +. . +.......++.++|+|
T Consensus 150 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~----------~---------~~~~~~~~~~~p~dvA 207 (245)
T 3e9n_A 150 KHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM---DS----------Q---------GTNFRPEIYIEPKEIA 207 (245)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhh---hh----------h---------hcccccccCCCHHHHH
Confidence 99999988765 35899999999999876542211 00 0 0001123468899999
Q ss_pred hHHHHHHHhhhcCCCCCCcEEEecC
Q 037479 316 NAIVVAVVAHAKQPSDVNNIYQVGS 340 (492)
Q Consensus 316 ~~ii~~~~~~~~~~~~~~~iy~i~~ 340 (492)
++++.++..... +.+||+.-
T Consensus 208 ~~i~~l~~~~~~-----~~~~~i~~ 227 (245)
T 3e9n_A 208 NAIRFVIDAGET-----TQITNVDV 227 (245)
T ss_dssp HHHHHHHTSCTT-----EEEEEEEE
T ss_pred HHHHHHHcCCCc-----cceeeeEE
Confidence 999999874321 67788753
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.6e-17 Score=154.98 Aligned_cols=221 Identities=15% Similarity=0.134 Sum_probs=144.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|.+ |++..++... ..+.+.+++ +. ...++.+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~---Vv~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~~ 81 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFT---VVINYAGKAA--AAEEVAGKI---------EA---------AGGKALT 81 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCE---EEEEESSCSH--HHHHHHHHH---------HH---------TTCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHH---------Hh---------cCCeEEE
Confidence 35899999999999999999999999964 4665443321 122222111 11 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-cc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-KL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~ 154 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+.... .-
T Consensus 82 ~~~Dl~-------~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 154 (267)
T 3u5t_A 82 AQADVS-------DPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG 154 (267)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999 4444444443 79999999997532 24577889999999999998887632 23
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... ...
T Consensus 155 g~iv~isS~~~~~~~--------------------------------------------------------------~~~ 172 (267)
T 3u5t_A 155 GRIINMSTSQVGLLH--------------------------------------------------------------PSY 172 (267)
T ss_dssp EEEEEECCTHHHHCC--------------------------------------------------------------TTC
T ss_pred CeEEEEeChhhccCC--------------------------------------------------------------CCc
Confidence 489999986543211 234
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+.+.+ ..++++..+.|+.|..+...... . ......+ ........+.
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~-----~~~~~~~---------~~~~p~~r~~ 235 (267)
T 3u5t_A 173 GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK---S-----DEVRDRF---------AKLAPLERLG 235 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------------CHHHH---------HTSSTTCSCB
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC---C-----HHHHHHH---------HhcCCCCCCc
Confidence 58999999999988765 35899999999998765431100 0 0000011 1111223567
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.++|+|++++.++....... . |+++++.+|
T Consensus 236 ~pedvA~~v~~L~s~~~~~i-t-G~~i~vdGG 265 (267)
T 3u5t_A 236 TPQDIAGAVAFLAGPDGAWV-N-GQVLRANGG 265 (267)
T ss_dssp CHHHHHHHHHHHHSTTTTTC-C-SEEEEESSS
T ss_pred CHHHHHHHHHHHhCccccCc-c-CCEEEeCCC
Confidence 89999999999886433222 2 889998876
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-16 Score=156.20 Aligned_cols=225 Identities=15% Similarity=0.066 Sum_probs=147.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE-ecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL-RAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv-R~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++|++|||||+|+||+++++.|++.|+ +|+++. |+... .+.+. ..+..+. ..++.
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~---~Vv~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~ 100 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSAAE---ANALS---------ATLNARR--------PNSAI 100 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHH---HHHHH---------HHHHHHS--------TTCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCCHHH---HHHHH---------HHHHhhc--------CCeEE
Confidence 6789999999999999999999999996 558888 75321 11211 1111111 25688
Q ss_pred EEecCCCCCCC----------CCCchhhHHHhc-------cCccEEEEcccccCc---------------------chhH
Q 037479 89 LVPGDITREDL----------GVKDSNLREEMW-------NKLDVVINLAATTNF---------------------DERY 130 (492)
Q Consensus 89 ~v~gDl~~~~l----------gl~~~~~~~~~~-------~~vd~Vih~Aa~~~~---------------------~~~~ 130 (492)
++.+|+++++- -..+....+.++ .++|++||+||.... .+.+
T Consensus 101 ~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 180 (328)
T 2qhx_A 101 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETAT 180 (328)
T ss_dssp EEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHH
T ss_pred EEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHH
Confidence 99999996430 000000233333 379999999997532 3446
Q ss_pred HHHHHHhHHHHHHHHHHHHhcc---c------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHH
Q 037479 131 DVALDLNTFGAKHVLNFSKKCA---K------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQ 201 (492)
Q Consensus 131 ~~~~~~Nv~gt~~ll~~a~~~~---~------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (492)
+..+++|+.|+.++++++.... + ..+||++||...+...
T Consensus 181 ~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~-------------------------------- 228 (328)
T 2qhx_A 181 ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL-------------------------------- 228 (328)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC--------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC--------------------------------
Confidence 6789999999999999876421 2 4689999996544211
Q ss_pred HHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCcc
Q 037479 202 ELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGW 276 (492)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw 276 (492)
.....|+.||+..+.+.+.+ ..++++.+|+|+.|.++. ...
T Consensus 229 ------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~--- 274 (328)
T 2qhx_A 229 ------------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP--- 274 (328)
T ss_dssp ------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---
T ss_pred ------------------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---
Confidence 23468999999999888755 358999999999998765 211
Q ss_pred ccCcCchHHHHHhccCceeeEEecCCCccc-ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 277 AEGIRTIDSLAVGYGKGRLTCFLGDVKGIV-DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 277 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
......+.... ... -+..++|+|++++.++....... . +.++++.++
T Consensus 275 -------~~~~~~~~~~~---------p~~~r~~~pedvA~~v~~l~s~~~~~i-t-G~~i~vdGG 322 (328)
T 2qhx_A 275 -------PAVWEGHRSKV---------PLYQRDSSAAEVSDVVIFLCSSKAKYI-T-GTCVKVDGG 322 (328)
T ss_dssp -------HHHHHHHHTTC---------TTTTSCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred -------HHHHHHHHhhC---------CCCCCCCCHHHHHHHHHHHhCccccCc-c-CcEEEECCC
Confidence 11111111110 011 35779999999999886433222 2 789999887
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.8e-17 Score=156.13 Aligned_cols=215 Identities=11% Similarity=0.090 Sum_probs=146.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|+ +|+++.|+... .+.+. ++ +..++.+
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~---~Vi~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 80 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGL---GVVIADLAAEK---GKALA-------------DE--------LGNRAEF 80 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH--------HCTTEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHH-------------HH--------hCCceEE
Confidence 6789999999999999999999999996 56888886321 11111 11 1367899
Q ss_pred EecCCCCCCCCCCchhhHHHhcc------CccEEEEccccc-Cc------------chhHHHHHHHhHHHHHHHHHHHHh
Q 037479 90 VPGDITREDLGVKDSNLREEMWN------KLDVVINLAATT-NF------------DERYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~-~~------------~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
+.+|++ +.+..+.+++ ++|++||+||.. .. .+.+...+++|+.|+.++++++..
T Consensus 81 ~~~Dl~-------~~~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 153 (281)
T 3ppi_A 81 VSTNVT-------SEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAA 153 (281)
T ss_dssp EECCTT-------CHHHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 999999 4444444443 689999995432 11 134688899999999999998764
Q ss_pred cc---------cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHh
Q 037479 151 CA---------KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMK 221 (492)
Q Consensus 151 ~~---------~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (492)
.. +-.++|++||...+...
T Consensus 154 ~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------------------------- 181 (281)
T 3ppi_A 154 SIAAAEPRENGERGALVLTASIAGYEGQ---------------------------------------------------- 181 (281)
T ss_dssp HHHTSCCCTTSCCEEEEEECCGGGTSCC----------------------------------------------------
T ss_pred HHHhhcccccCCCeEEEEEecccccCCC----------------------------------------------------
Confidence 31 23489999996554221
Q ss_pred hhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceee
Q 037479 222 DLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLT 296 (492)
Q Consensus 222 ~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~ 296 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|..+...... ......+..+.
T Consensus 182 ----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---------~~~~~~~~~~~-- 240 (281)
T 3ppi_A 182 ----------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG---------EEALAKFAANI-- 240 (281)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC---------HHHHHHHHHTC--
T ss_pred ----------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc---------HHHHHHHHhcC--
Confidence 23468999999888777654 35899999999998765332111 11111111111
Q ss_pred EEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 297 CFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 297 ~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....++.++|+|++++.++.+ .... |+++++.++
T Consensus 241 ------~~~~~~~~pedvA~~v~~l~s~-~~~t---G~~i~vdGG 275 (281)
T 3ppi_A 241 ------PFPKRLGTPDEFADAAAFLLTN-GYIN---GEVMRLDGA 275 (281)
T ss_dssp ------CSSSSCBCHHHHHHHHHHHHHC-SSCC---SCEEEESTT
T ss_pred ------CCCCCCCCHHHHHHHHHHHHcC-CCcC---CcEEEECCC
Confidence 1113578899999999999873 2222 889999988
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=7.7e-17 Score=151.06 Aligned_cols=192 Identities=14% Similarity=0.126 Sum_probs=132.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+. ++ +..++.+
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 53 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGH---QVSMMGRRYQR---LQQQE-------------LL--------LGNAVIG 53 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH--------HGGGEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------HH--------hcCCceE
Confidence 4579999999999999999999999996 56888886421 11111 11 1246889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--K 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~ 153 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++.... +
T Consensus 54 ~~~D~~-------~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 126 (235)
T 3l6e_A 54 IVADLA-------HHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER 126 (235)
T ss_dssp EECCTT-------SHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EECCCC-------CHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 999999 4444444443 68999999997532 25678899999999999998885431 1
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|++||....... ..
T Consensus 127 ~~~iv~isS~~~~~~~--------------------------------------------------------------~~ 144 (235)
T 3l6e_A 127 GGVLANVLSSAAQVGK--------------------------------------------------------------AN 144 (235)
T ss_dssp CEEEEEECCEECCSSC--------------------------------------------------------------SS
T ss_pred CCEEEEEeCHHhcCCC--------------------------------------------------------------CC
Confidence 1389999996544221 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+.+.+ ..++++..++|+.|-.+...... . .....+
T Consensus 145 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~--------------------~~~~~~ 197 (235)
T 3l6e_A 145 ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD-------H--------------------VDPSGF 197 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------------------------C
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC-------C--------------------CCCcCC
Confidence 357999999999888765 35899999999988665331100 0 001146
Q ss_pred eehhhhhhHHHHHHHh
Q 037479 309 IPADMVVNAIVVAVVA 324 (492)
Q Consensus 309 v~vddva~~ii~~~~~ 324 (492)
+..+|+|++++.++..
T Consensus 198 ~~pedvA~~v~~l~~~ 213 (235)
T 3l6e_A 198 MTPEDAAAYMLDALEA 213 (235)
T ss_dssp BCHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHhC
Confidence 8899999999998863
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=7.1e-17 Score=152.39 Aligned_cols=218 Identities=11% Similarity=0.098 Sum_probs=143.3
Q ss_pred cccHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhh
Q 037479 3 LGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNAL 82 (492)
Q Consensus 3 ~~~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~ 82 (492)
++.-...+++|+++||||+|+||++++++|++.|+ +|+++.|+... .+.+.+ .++...
T Consensus 5 ~~~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~~------- 62 (247)
T 3i1j_A 5 YSAHPELLKGRVILVTGAARGIGAAAARAYAAHGA---SVVLLGRTEAS---LAEVSD---------QIKSAG------- 62 (247)
T ss_dssp CCCCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHTT-------
T ss_pred CCCCCccCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEecCHHH---HHHHHH---------HHHhcC-------
Confidence 33344567899999999999999999999999996 56888886432 111111 111111
Q ss_pred ccCceEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHH
Q 037479 83 ISEKITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
..++.++.+|+... +.+....++ .++|++||+||.... .+.++..+++|+.|+.++++.
T Consensus 63 -~~~~~~~~~d~d~~-----~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 136 (247)
T 3i1j_A 63 -QPQPLIIALNLENA-----TAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRA 136 (247)
T ss_dssp -SCCCEEEECCTTTC-----CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHH
T ss_pred -CCCceEEEeccccC-----CHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHH
Confidence 24567777777211 333333333 379999999997521 256788899999999999998
Q ss_pred HHhc---ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhh
Q 037479 148 SKKC---AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLG 224 (492)
Q Consensus 148 a~~~---~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (492)
+... .+..++|++||.......
T Consensus 137 ~~~~~~~~~~~~iv~isS~~~~~~~------------------------------------------------------- 161 (247)
T 3i1j_A 137 LLPLLKRSEDASIAFTSSSVGRKGR------------------------------------------------------- 161 (247)
T ss_dssp HHHHHTTSSSEEEEEECCGGGTSCC-------------------------------------------------------
T ss_pred HHHHHHhCCCCeEEEEcchhhcCCC-------------------------------------------------------
Confidence 8432 145689999986543211
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----c-CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEE
Q 037479 225 IKRAKIYGWPNTYVFTKVMGEMFIEHL-----K-ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCF 298 (492)
Q Consensus 225 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~-~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~ 298 (492)
.....|+.||+..+.+.+.+ . .++++..++|+.|-.+.. ....
T Consensus 162 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-----------------~~~~------- 210 (247)
T 3i1j_A 162 -------ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-----------------AQAY------- 210 (247)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-----------------HHHS-------
T ss_pred -------CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-----------------hhcc-------
Confidence 23468999999999888754 2 579999999988755321 0000
Q ss_pred ecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEe
Q 037479 299 LGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQV 338 (492)
Q Consensus 299 ~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i 338 (492)
.......+...+|+|++++.++........ |+.+++
T Consensus 211 --~~~~~~~~~~p~dva~~~~~l~s~~~~~it--G~~i~~ 246 (247)
T 3i1j_A 211 --PDENPLNNPAPEDIMPVYLYLMGPDSTGIN--GQALNA 246 (247)
T ss_dssp --TTSCGGGSCCGGGGTHHHHHHHSGGGTTCC--SCEEEC
T ss_pred --cccCccCCCCHHHHHHHHHHHhCchhcccc--CeeecC
Confidence 001112356789999999998864332221 666654
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=5.2e-16 Score=148.14 Aligned_cols=232 Identities=12% Similarity=0.054 Sum_probs=150.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+. ..+..+.+ ..++.+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~~~-------~~~~~~ 63 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA---AVAFCARDGER---LRAAE---------SALRQRFP-------GARLFA 63 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHHST-------TCCEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHHhcC-------CceEEE
Confidence 5789999999999999999999999996 56888886422 11111 11222111 145899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 64 ~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 136 (265)
T 3lf2_A 64 SVCDVL-------DALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR 136 (265)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EeCCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999 444444443 378999999997533 25578899999999999999886531
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||....... .
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 154 (265)
T 3lf2_A 137 ADAAIVCVNSLLASQPE--------------------------------------------------------------P 154 (265)
T ss_dssp TTEEEEEEEEGGGTSCC--------------------------------------------------------------T
T ss_pred CCeEEEEECCcccCCCC--------------------------------------------------------------C
Confidence 34589999996544211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccc-cCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWA-EGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
....|+.||+..+.+.+.+ ..++++..++|+.|.++......... ........+....... ......
T Consensus 155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~p~~ 227 (265)
T 3lf2_A 155 HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN-------KQIPLG 227 (265)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH-------TTCTTC
T ss_pred CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc-------cCCCcC
Confidence 2468999999999888755 35899999999998775321100000 0000001111000000 001122
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+..++|+|++++.++........ |+++++.+|
T Consensus 228 r~~~pedvA~~v~fL~s~~~~~it--G~~i~vdGG 260 (265)
T 3lf2_A 228 RLGKPIEAARAILFLASPLSAYTT--GSHIDVSGG 260 (265)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SEEEEESSS
T ss_pred CCcCHHHHHHHHHHHhCchhcCcC--CCEEEECCC
Confidence 467899999999998874333222 889999887
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.1e-16 Score=147.87 Aligned_cols=222 Identities=12% Similarity=0.126 Sum_probs=148.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|. +|+++.+.... ..+....+ +.. ...++.+
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~~~ 61 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGA---LVAIHYGNRKE--EAEETVYE---------IQS---------NGGSAFS 61 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCSH--HHHHHHHH---------HHH---------TTCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCchH--HHHHHHHH---------HHh---------cCCceEE
Confidence 5789999999999999999999999996 44665443321 11111111 111 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+.
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 134 (255)
T 3icc_A 62 IGANLES-------LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQAL 134 (255)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred EecCcCC-------HHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHH
Confidence 9999994 443334332 29999999997532 14567889999999999999987
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... +-.++|++||.......
T Consensus 135 ~~~~~~~~iv~isS~~~~~~~----------------------------------------------------------- 155 (255)
T 3icc_A 135 SRLRDNSRIINISSAATRISL----------------------------------------------------------- 155 (255)
T ss_dssp TTEEEEEEEEEECCGGGTSCC-----------------------------------------------------------
T ss_pred HhhCCCCEEEEeCChhhccCC-----------------------------------------------------------
Confidence 642 23589999996544221
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|..+....... ..... ... ....
T Consensus 156 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~-~~~--------~~~~ 216 (255)
T 3icc_A 156 ---PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS-------DPMMK-QYA--------TTIS 216 (255)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT-------SHHHH-HHH--------HHTS
T ss_pred ---CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc-------cHHHH-Hhh--------hccC
Confidence 12468999999999888755 358999999999998776533211 01111 100 0011
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+..++|+|++++.++........ |+++++.+|
T Consensus 217 ~~~~~~~~~dva~~~~~l~s~~~~~~t--G~~i~vdgG 252 (255)
T 3icc_A 217 AFNRLGEVEDIADTAAFLASPDSRWVT--GQLIDVSGG 252 (255)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESSS
T ss_pred CcCCCCCHHHHHHHHHHHhCcccCCcc--CCEEEecCC
Confidence 223567899999999988864333222 889999887
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=152.34 Aligned_cols=228 Identities=15% Similarity=0.087 Sum_probs=144.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... .+.+..+ ++.. ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 60 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGT---AIALLDMNREA---LEKAEAS---------VREK---------GVEARS 60 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHTT---------TSCEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 6789999999999999999999999996 56888886421 1111111 1110 246889
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEccccc-Cc-------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATT-NF-------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|+++ .+..+.+++ ++|+|||+||.. .. .+.++..+++|+.|+.++++++....
T Consensus 61 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 133 (262)
T 1zem_A 61 YVCDVTS-------EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMIT 133 (262)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999994 443434333 799999999965 21 24578889999999999999876531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||...+...
T Consensus 134 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 151 (262)
T 1zem_A 134 QNYGRIVNTASMAGVKGP-------------------------------------------------------------- 151 (262)
T ss_dssp HTCEEEEEECCHHHHSCC--------------------------------------------------------------
T ss_pred cCCcEEEEEcchhhccCC--------------------------------------------------------------
Confidence 34689999996544221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-Cccc-----cCcCchHH-HHHhccCceeeEEe
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-PGWA-----EGIRTIDS-LAVGYGKGRLTCFL 299 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~gw~-----~~~~~~~~-~~~~~~~g~~~~~~ 299 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|..+..... ..+. ........ ....+..
T Consensus 152 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 224 (262)
T 1zem_A 152 PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG------- 224 (262)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH-------
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHh-------
Confidence 12357999998888777654 4589999999998865432100 0000 00000001 1111100
Q ss_pred cCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 300 GDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 300 ~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....-+...+|+|++++.++........ +.++++.+|
T Consensus 225 --~~p~~r~~~p~dvA~~v~~l~s~~~~~it--G~~i~vdGG 262 (262)
T 1zem_A 225 --SVPMRRYGDINEIPGVVAFLLGDDSSFMT--GVNLPIAGG 262 (262)
T ss_dssp --TSTTSSCBCGGGSHHHHHHHHSGGGTTCC--SCEEEESCC
T ss_pred --cCCCCCCcCHHHHHHHHHHHcCchhcCcC--CcEEecCCC
Confidence 00111357789999999988864332221 778877653
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.71 E-value=2e-16 Score=146.92 Aligned_cols=200 Identities=13% Similarity=0.059 Sum_probs=140.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|+ +|+++.|+. +
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~-----------------------------------~---- 41 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHT---IVHVASRQT-----------------------------------G---- 41 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTE---EEEEESGGG-----------------------------------T----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEecCCc-----------------------------------c----
Confidence 4689999999999999999999999996 557776642 1
Q ss_pred EecCCCCCCCCCCchhhHHHhc---cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-cceeE
Q 037479 90 VPGDITREDLGVKDSNLREEMW---NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA-KLIVL 157 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~---~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~ 157 (492)
+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++.+.. .-.++
T Consensus 42 --~D~~-------~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~i 112 (223)
T 3uce_A 42 --LDIS-------DEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSI 112 (223)
T ss_dssp --CCTT-------CHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred --cCCC-------CHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEE
Confidence 6777 444444554 479999999997521 25577889999999999999997642 22489
Q ss_pred EEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchH
Q 037479 158 VHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTY 237 (492)
Q Consensus 158 V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y 237 (492)
|++||...+... .....|
T Consensus 113 v~~sS~~~~~~~--------------------------------------------------------------~~~~~Y 130 (223)
T 3uce_A 113 TLTSGMLSRKVV--------------------------------------------------------------ANTYVK 130 (223)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------------TTCHHH
T ss_pred EEecchhhccCC--------------------------------------------------------------CCchHH
Confidence 999986544321 234689
Q ss_pred HHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 238 VFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 238 ~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
+.||+..|.+.+.+ .. +++..++|+.|.++....... .....+......+ .....+..++|
T Consensus 131 ~asK~a~~~~~~~la~e~~~-i~vn~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~d 195 (223)
T 3uce_A 131 AAINAAIEATTKVLAKELAP-IRVNAISPGLTKTEAYKGMNA-----DDRDAMYQRTQSH---------LPVGKVGEASD 195 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-SEEEEEEECSBCSGGGTTSCH-----HHHHHHHHHHHHH---------STTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhcC-cEEEEEEeCCCcchhhhhcch-----hhHHHHHHHHhhc---------CCCCCccCHHH
Confidence 99999999888765 33 999999999998765432110 0011111111111 11235778999
Q ss_pred hhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 314 VVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 314 va~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|++++.++.. .... ++++++.++
T Consensus 196 vA~~~~~l~~~-~~~t---G~~i~vdgG 219 (223)
T 3uce_A 196 IAMAYLFAIQN-SYMT---GTVIDVDGG 219 (223)
T ss_dssp HHHHHHHHHHC-TTCC---SCEEEESTT
T ss_pred HHHHHHHHccC-CCCC---CcEEEecCC
Confidence 99999988863 2222 889999887
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-16 Score=151.18 Aligned_cols=204 Identities=15% Similarity=0.169 Sum_probs=133.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.++ ++.. ..++.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 57 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA---KILLGARRQAR---IEAIATE---------IRDA---------GGTALA 57 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 4689999999999999999999999996 56888886432 1221111 1111 256888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 58 ~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 130 (264)
T 3tfo_A 58 QVLDVT-------DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ 130 (264)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 999999 4444444443 79999999997643 2557889999999999988877542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 131 ~~g~IV~isS~~~~~~~--------------------------------------------------------------~ 148 (264)
T 3tfo_A 131 RSGQIINIGSIGALSVV--------------------------------------------------------------P 148 (264)
T ss_dssp TCEEEEEECCGGGTCCC--------------------------------------------------------------T
T ss_pred CCeEEEEEcCHHHcccC--------------------------------------------------------------C
Confidence 44689999996544221 1
Q ss_pred CCchHHHHHHHHHHHHHHh---cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 233 WPNTYVFTKVMGEMFIEHL---KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~---~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
....|+.||+..+.+.+.+ ..++++..++|+.|..+....... . ... . .... ...-..
T Consensus 149 ~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~---~-----~~~-~----~~~~------~~~~~~ 209 (264)
T 3tfo_A 149 TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITH---E-----ETM-A----AMDT------YRAIAL 209 (264)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------------------------------CC
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccc---h-----hHH-H----HHHh------hhccCC
Confidence 2457999999999887655 248999999999987654321110 0 000 0 0000 001136
Q ss_pred ehhhhhhHHHHHHHhh
Q 037479 310 PADMVVNAIVVAVVAH 325 (492)
Q Consensus 310 ~vddva~~ii~~~~~~ 325 (492)
..+|+|++++.++...
T Consensus 210 ~pedvA~~v~~l~s~~ 225 (264)
T 3tfo_A 210 QPADIARAVRQVIEAP 225 (264)
T ss_dssp CHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHhcCC
Confidence 7999999999998753
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.5e-16 Score=150.99 Aligned_cols=215 Identities=13% Similarity=0.166 Sum_probs=145.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH----HHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA----TVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~----~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+...... .+...++ +.. ...
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~---------~~~ 65 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA---NVALVAKSAEPHPKLPGTIYTAAKE---------IEE---------AGG 65 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC---EEEEEESCCSCCSSSCCCHHHHHHH---------HHH---------HTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECChhhhhhhhHHHHHHHHH---------HHh---------cCC
Confidence 5789999999999999999999999996 56899997653211 1111111 111 136
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 66 ~~~~~~~Dv~-------~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 138 (285)
T 3sc4_A 66 QALPIVGDIR-------DGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPH 138 (285)
T ss_dssp EEEEEECCTT-------SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cEEEEECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 7899999999 4444445443 79999999997642 2457788999999999999988764
Q ss_pred c---cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 152 A---KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 152 ~---~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
. +..++|++||........
T Consensus 139 m~~~~~g~iv~isS~~~~~~~~---------------------------------------------------------- 160 (285)
T 3sc4_A 139 MKGRDNPHILTLSPPIRLEPKW---------------------------------------------------------- 160 (285)
T ss_dssp TTTSSSCEEEECCCCCCCSGGG----------------------------------------------------------
T ss_pred HHHcCCcEEEEECChhhccCCC----------------------------------------------------------
Confidence 2 345899999965432210
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCc-eecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTI-ITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~-v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..+.+.+.+ ..++++..++|+. +-.+ +...... ..
T Consensus 161 ---~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~-----------------~~~~~~~--------~~ 212 (285)
T 3sc4_A 161 ---LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA-----------------AVQNLLG--------GD 212 (285)
T ss_dssp ---SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH-----------------HHHHHHT--------SC
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH-----------------HHHhhcc--------cc
Confidence 12368999999999888755 3589999999983 3221 1111111 11
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+...+|+|++++.++.... .. . ++.+.+.++
T Consensus 213 ~~~~r~~~pedvA~~~~~l~s~~~-~~-t-G~~i~~dgg 248 (285)
T 3sc4_A 213 EAMARSRKPEVYADAAYVVLNKPS-SY-T-GNTLLCEDV 248 (285)
T ss_dssp CCCTTCBCTHHHHHHHHHHHTSCT-TC-C-SCEEEHHHH
T ss_pred ccccCCCCHHHHHHHHHHHhCCcc-cc-c-ceEEEEcCc
Confidence 112246788999999999887433 21 1 666665543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-16 Score=154.26 Aligned_cols=223 Identities=15% Similarity=0.129 Sum_probs=146.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|. +|+++.|+.. ...+.+.+ .+..+. ..++.+
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~--~~~~~~~~---------~l~~~~--------~~~~~~ 78 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGY---RVVIHYHNSA--EAAVSLAD---------ELNKER--------SNTAVV 78 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTC---EEEEEESSCH--HHHHHHHH---------HHHHHS--------TTCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---eEEEEeCCch--HHHHHHHH---------HHHhhc--------CCceEE
Confidence 6789999999999999999999999996 5688888641 11111111 111111 256889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-----------------chhHHHHHHHhHHHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-----------------DERYDVALDLNTFGAKHVL 145 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-----------------~~~~~~~~~~Nv~gt~~ll 145 (492)
+.+|+++++. ..+..+.++ .++|++||+||.... .+.++..+++|+.|+..++
T Consensus 79 ~~~Dv~~~~~---~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 155 (288)
T 2x9g_A 79 CQADLTNSNV---LPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLT 155 (288)
T ss_dssp EECCCSCSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHH
T ss_pred EEeecCCccC---CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHH
Confidence 9999994210 044343443 379999999996431 1345678999999999999
Q ss_pred HHHHhcc---c------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHH
Q 037479 146 NFSKKCA---K------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAI 216 (492)
Q Consensus 146 ~~a~~~~---~------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (492)
+.+.... + ..++|++||...+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------- 188 (288)
T 2x9g_A 156 MSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC----------------------------------------------- 188 (288)
T ss_dssp HHHHHHC--------CCCEEEEEECCTTTTSCC-----------------------------------------------
T ss_pred HHHHHHHhhcCCCCCCCCeEEEEEecccccCCC-----------------------------------------------
Confidence 9886532 1 3589999996554221
Q ss_pred HHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc
Q 037479 217 TLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG 291 (492)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~ 291 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|.++. ... . .....+.
T Consensus 189 ---------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~----~------~~~~~~~ 242 (288)
T 2x9g_A 189 ---------------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMG----E------EEKDKWR 242 (288)
T ss_dssp ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSC----H------HHHHHHH
T ss_pred ---------------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccC----h------HHHHHHH
Confidence 23467999999888777654 358999999999998875 210 0 1111111
Q ss_pred CceeeEEecCCCcccce-eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 292 KGRLTCFLGDVKGIVDV-IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 292 ~g~~~~~~~~~~~~~d~-v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.. .+ ...+ ...+|+|++++.++........ +.++++.++
T Consensus 243 ~~----~p-----~~r~~~~pedvA~~v~~l~s~~~~~it--G~~i~vdGG 282 (288)
T 2x9g_A 243 RK----VP-----LGRREASAEQIADAVIFLVSGSAQYIT--GSIIKVDGG 282 (288)
T ss_dssp HT----CT-----TTSSCCCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred hh----CC-----CCCCCCCHHHHHHHHHHHhCccccCcc--CCEEEECcc
Confidence 00 00 1124 6789999999999874332222 788988877
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.1e-16 Score=147.28 Aligned_cols=212 Identities=16% Similarity=0.146 Sum_probs=138.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+++||||+|+||++++++|++.|+ +|+++.|+... .+.+. ++ +..++.++.+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~~~~ 53 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH---KVIATGRRQER---LQELK-------------DE--------LGDNLYIAQL 53 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH--------HCTTEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------hcCceEEEEc
Confidence 6899999999999999999999996 56888885321 11111 11 1246889999
Q ss_pred CCCCCCCCCCchhhHHHhcc-------CccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhc---ccc
Q 037479 93 DITREDLGVKDSNLREEMWN-------KLDVVINLAATTN----F----DERYDVALDLNTFGAKHVLNFSKKC---AKL 154 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~ 154 (492)
|++ +.+..+.+++ ++|++||+||... + .+.++..+++|+.|+.++++.+... .+.
T Consensus 54 Dv~-------~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~ 126 (248)
T 3asu_A 54 DVR-------NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH 126 (248)
T ss_dssp CTT-------CHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 999 4444445543 6899999999652 1 2457889999999999998887632 145
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....... ...
T Consensus 127 g~iv~isS~~~~~~~--------------------------------------------------------------~~~ 144 (248)
T 3asu_A 127 GHIINIGSTAGSWPY--------------------------------------------------------------AGG 144 (248)
T ss_dssp CEEEEECCGGGTSCC--------------------------------------------------------------TTC
T ss_pred ceEEEEccchhccCC--------------------------------------------------------------CCC
Confidence 689999996543211 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceec-CCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITG-TYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g-~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
..|+.||+..+.+.+.. ..++++.+++|+.|.| +..... . ........ ... .....
T Consensus 145 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~---~---~~~~~~~~--------~~~----~~~~~ 206 (248)
T 3asu_A 145 NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR---F---KGDDGKAE--------KTY----QNTVA 206 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------------------------CC
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc---c---cCchHHHH--------HHH----hccCC
Confidence 68999999999988754 3589999999999984 332100 0 00000000 000 00123
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+..+|+|++++.++....... +....+.+.
T Consensus 207 ~~p~dvA~~v~~l~s~~~~~~---g~~i~v~~~ 236 (248)
T 3asu_A 207 LTPEDVSEAVWWVSTLPAHVN---INTLEMMPV 236 (248)
T ss_dssp BCHHHHHHHHHHHHHSCTTCC---CCEEEECCT
T ss_pred CCHHHHHHHHHHHhcCCccce---eeEEEEccc
Confidence 589999999999887432222 556665543
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.8e-16 Score=150.38 Aligned_cols=226 Identities=17% Similarity=0.154 Sum_probs=146.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+.. ++. + +.++ ...++.+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~------~~~-~---------~~~~--------~~~~~~~ 55 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA---RVAVLDKSAE------RLR-E---------LEVA--------HGGNAVG 55 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH-H---------HHHH--------TBTTEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCHH------HHH-H---------HHHH--------cCCcEEE
Confidence 4689999999999999999999999996 5688887532 221 1 1111 1367899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc------------hhHHHHHHHhHHHHHHHHHHHHh
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD------------ERYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~------------~~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
+.+|+++ .+..+.++ .++|++||+||..... +.++..+++|+.|+.++++++..
T Consensus 56 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 128 (281)
T 3zv4_A 56 VVGDVRS-------LQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLP 128 (281)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 9999994 44333443 3689999999975321 23677899999999999998865
Q ss_pred cc--cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 151 CA--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 151 ~~--~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
.. +-.++|++||...+...
T Consensus 129 ~~~~~~g~iv~isS~~~~~~~----------------------------------------------------------- 149 (281)
T 3zv4_A 129 ALVSSRGSVVFTISNAGFYPN----------------------------------------------------------- 149 (281)
T ss_dssp HHHHHTCEEEEECCGGGTSSS-----------------------------------------------------------
T ss_pred HHHhcCCeEEEEecchhccCC-----------------------------------------------------------
Confidence 31 22489999986543211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCc-CchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGI-RTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.+ .+++++..+.|+.|..+...+........ .........+. ...
T Consensus 150 ---~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 217 (281)
T 3zv4_A 150 ---GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLK---------SVL 217 (281)
T ss_dssp ---SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHH---------HTC
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHH---------hcC
Confidence 12457999999999888765 34599999999999876543211000000 00000000000 111
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+...+|+|++++.++.......-. |+++++.+|
T Consensus 218 p~~r~~~pedvA~~v~fL~s~~~~~~it-G~~i~vdGG 254 (281)
T 3zv4_A 218 PIGRMPALEEYTGAYVFFATRGDSLPAT-GALLNYDGG 254 (281)
T ss_dssp TTSSCCCGGGGSHHHHHHHSTTTSTTCS-SCEEEESSS
T ss_pred CCCCCCCHHHHHHHHHHhhccccccccc-CcEEEECCC
Confidence 1234678899999999988622221112 889999887
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=154.60 Aligned_cols=199 Identities=15% Similarity=0.146 Sum_probs=136.5
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
..+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. +.+++. + ..++
T Consensus 24 ~~~~~k~vlITGasggIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~-~-------~~~~ 80 (286)
T 1xu9_A 24 EMLQGKKVIVTGASKGIGREMAYHLAKMGA---HVVVTARSKET---LQKVV---------SHCLEL-G-------AASA 80 (286)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHH-T-------CSEE
T ss_pred hhcCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH---------HHHHHh-C-------CCce
Confidence 347899999999999999999999999996 56888886421 11111 111111 0 1368
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEc-ccccCc------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINL-AATTNF------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~-Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
.++.+|++ +.+..+.+++ ++|+|||+ |+.... .+.++..+++|+.|+.++++++....
T Consensus 81 ~~~~~Dl~-------d~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 153 (286)
T 1xu9_A 81 HYIAGTME-------DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK 153 (286)
T ss_dssp EEEECCTT-------CHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEeCCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 89999999 4444434443 79999999 554322 24567889999999999999876531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||...+...
T Consensus 154 ~~~g~iv~isS~~~~~~~-------------------------------------------------------------- 171 (286)
T 1xu9_A 154 QSNGSIVVVSSLAGKVAY-------------------------------------------------------------- 171 (286)
T ss_dssp HHTCEEEEEEEGGGTSCC--------------------------------------------------------------
T ss_pred HCCCEEEEECCcccccCC--------------------------------------------------------------
Confidence 23589999997543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..|.+.+.+ ..++.+++++|+.|.++... ....+ ..
T Consensus 172 ~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~-----------------~~~~~---------~~ 225 (286)
T 1xu9_A 172 PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-----------------KAVSG---------IV 225 (286)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-----------------HHSCG---------GG
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH-----------------Hhccc---------cc
Confidence 23468999999999887643 24899999999887653210 00001 11
Q ss_pred ccceeehhhhhhHHHHHHHh
Q 037479 305 IVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~ 324 (492)
....++++|+|++++.++..
T Consensus 226 ~~~~~~~~~vA~~i~~~~~~ 245 (286)
T 1xu9_A 226 HMQAAPKEECALEIIKGGAL 245 (286)
T ss_dssp GGGCBCHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHHHHHHhc
Confidence 23568899999999998863
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-16 Score=150.59 Aligned_cols=223 Identities=13% Similarity=0.051 Sum_probs=150.2
Q ss_pred cCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+|+||||+ |+||++++++|++.|. +|+++.|+..... .+.+. .+.+.. ..++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~---~v~~~~~~~~~~~-~~~~~----------~l~~~~--------~~~~ 75 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGA---AVAITYASRAQGA-EENVK----------ELEKTY--------GIKA 75 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSC---EEEECBSSSSSHH-HHHHH----------HHHHHH--------CCCE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCC---eEEEEeCCcchhH-HHHHH----------HHHHhc--------CCce
Confidence 678999999999 9999999999999996 5577777654321 11111 111111 3678
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-- 151 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (492)
.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 76 ~~~~~Dl~-------~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 148 (267)
T 3gdg_A 76 KAYKCQVD-------SYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFK 148 (267)
T ss_dssp ECCBCCTT-------CHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred eEEecCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 99999999 4444444443 67999999997542 2457889999999999999988432
Q ss_pred -ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 152 -AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 152 -~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
.+..++|++||........ +
T Consensus 149 ~~~~g~iv~isS~~~~~~~~--------~--------------------------------------------------- 169 (267)
T 3gdg_A 149 ERGTGSLVITASMSGHIANF--------P--------------------------------------------------- 169 (267)
T ss_dssp HHTCCEEEEECCGGGTSCCS--------S---------------------------------------------------
T ss_pred HcCCceEEEEccccccccCC--------C---------------------------------------------------
Confidence 1346899999865432110 0
Q ss_pred CCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.+ ...+.+..+.|+.|..+.....+ ......+. ......
T Consensus 170 -~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~---------~~~~~~~~---------~~~~~~ 230 (267)
T 3gdg_A 170 -QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP---------KETQQLWH---------SMIPMG 230 (267)
T ss_dssp -SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC---------HHHHHHHH---------TTSTTS
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC---------HHHHHHHH---------hcCCCC
Confidence 13468999999999888765 33489999999998765442211 11111111 112234
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+..++|+|++++.++....... . |+++++.+|
T Consensus 231 r~~~~~dva~~~~~l~s~~~~~i-t-G~~i~vdgG 263 (267)
T 3gdg_A 231 RDGLAKELKGAYVYFASDASTYT-T-GADLLIDGG 263 (267)
T ss_dssp SCEETHHHHHHHHHHHSTTCTTC-C-SCEEEESTT
T ss_pred CCcCHHHHHhHhheeecCccccc-c-CCEEEECCc
Confidence 57889999999998886432222 2 889999887
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=152.16 Aligned_cols=205 Identities=13% Similarity=0.086 Sum_probs=134.0
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.++||++|||||+|+||++++++|++.|. +|+++.|+... .+.+.+ .+... ....+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~--------~~~~~~ 86 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGY---SVVITGRRPDV---LDAAAG---------EIGGR--------TGNIVR 86 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHH--------HSSCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHH---------HHHhc--------CCCeEE
Confidence 35789999999999999999999999996 56888886432 111111 11111 113468
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 87 ~~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 159 (281)
T 4dry_A 87 AVVCDVG-------DPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMK 159 (281)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEcCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8999999 4444444443 68999999997532 25678899999999988888775431
Q ss_pred --c--ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 153 --K--LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 153 --~--~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
+ -.++|++||.......
T Consensus 160 ~~~~~~g~IV~isS~~~~~~~----------------------------------------------------------- 180 (281)
T 4dry_A 160 AQTPRGGRIINNGSISAQTPR----------------------------------------------------------- 180 (281)
T ss_dssp HSSSCCEEEEEECCGGGTCCC-----------------------------------------------------------
T ss_pred hcCCCCcEEEEECCHHhCCCC-----------------------------------------------------------
Confidence 1 3589999996543211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.+ ..++++..++|+.|..+....... +... .....
T Consensus 181 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-----------------~~~~--~~~~~ 238 (281)
T 4dry_A 181 ---PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST-----------------GVLQ--ANGEV 238 (281)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C-----------------EEEC--TTSCE
T ss_pred ---CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc-----------------hhhh--hhhcc
Confidence 23468999999999888755 358999999999987754322110 0000 00000
Q ss_pred cccceeehhhhhhHHHHHHHh
Q 037479 304 GIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~ 324 (492)
....++.++|+|++++.++..
T Consensus 239 ~~~~~~~pedvA~~v~fL~s~ 259 (281)
T 4dry_A 239 AAEPTIPIEHIAEAVVYMASL 259 (281)
T ss_dssp EECCCBCHHHHHHHHHHHHHS
T ss_pred cccCCCCHHHHHHHHHHHhCC
Confidence 112367899999999999874
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.3e-16 Score=161.07 Aligned_cols=203 Identities=21% Similarity=0.249 Sum_probs=143.3
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+-.+++||||||||+||.++++.|++.|. .+|+++.|+.......+.+.+++ .. ...++.
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l---------~~---------~g~~v~ 282 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAEL---------EA---------LGARTT 282 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCC--CEEEEEcCCCCCcHHHHHHHHHH---------Hh---------cCCEEE
Confidence 45679999999999999999999999986 35788999764332223322111 11 125789
Q ss_pred EEecCCCCCCCCCCchhhHHHhccC------ccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcccce
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNK------LDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCAKLI 155 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~------vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~ 155 (492)
++.+|++ +.+.+..++++ +|+|||+||.... .+.+...+++|+.|+.++.+++++. ++.
T Consensus 283 ~~~~Dv~-------d~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~ 354 (486)
T 2fr1_A 283 VAACDVT-------DRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLT 354 (486)
T ss_dssp EEECCTT-------CHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCS
T ss_pred EEEeCCC-------CHHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCC
Confidence 9999999 55555566654 5999999997643 2456778899999999999999887 788
Q ss_pred eEEEeeecee-ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 156 VLVHVSTAFV-WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 156 ~~V~vST~~v-~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
+||++||... +|.. ..
T Consensus 355 ~~V~~SS~a~~~g~~---------------------------------------------------------------g~ 371 (486)
T 2fr1_A 355 AFVLFSSFASAFGAP---------------------------------------------------------------GL 371 (486)
T ss_dssp EEEEEEEHHHHTCCT---------------------------------------------------------------TC
T ss_pred EEEEEcChHhcCCCC---------------------------------------------------------------CC
Confidence 9999999643 3321 23
Q ss_pred chHHHHHHHHHHHHHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 235 NTYVFTKVMGEMFIEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
..|+.+|+..+.+..+. ..++++++|+|+.+.+.... .. .... .+ .......++.++
T Consensus 372 ~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~------~~-----~~~~--------~~---~~~g~~~i~~e~ 429 (486)
T 2fr1_A 372 GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMA------EG-----PVAD--------RF---RRHGVIEMPPET 429 (486)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------------------------C---TTTTEECBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCccc------ch-----hHHH--------HH---HhcCCCCCCHHH
Confidence 57999999999887765 56899999999988764210 00 0000 00 011235789999
Q ss_pred hhhHHHHHHHh
Q 037479 314 VVNAIVVAVVA 324 (492)
Q Consensus 314 va~~ii~~~~~ 324 (492)
+++++..++..
T Consensus 430 ~a~~l~~~l~~ 440 (486)
T 2fr1_A 430 ACRALQNALDR 440 (486)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhC
Confidence 99999999874
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=150.10 Aligned_cols=205 Identities=17% Similarity=0.180 Sum_probs=138.8
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++|+++||||||+||++++++|++.|+ +|+++.|+... .+.+.+ .++.. ..++.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~l~~~---------~~~~~ 59 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGA---AVAIAARRVEK---LRALGD---------ELTAA---------GAKVH 59 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHT---------TCCEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHH---------HHHhc---------CCcEE
Confidence 46789999999999999999999999996 56888886321 111111 11110 25688
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
++.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++....
T Consensus 60 ~~~~Dv~-------~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 132 (247)
T 2jah_A 60 VLELDVA-------DRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLR 132 (247)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEECCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999 444444444 379999999997532 14577889999999999999886531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ .++|++||...+...
T Consensus 133 ~~-g~iv~isS~~~~~~~-------------------------------------------------------------- 149 (247)
T 2jah_A 133 SK-GTVVQMSSIAGRVNV-------------------------------------------------------------- 149 (247)
T ss_dssp HT-CEEEEECCGGGTCCC--------------------------------------------------------------
T ss_pred CC-CEEEEEccHHhcCCC--------------------------------------------------------------
Confidence 3 689999996543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..++++++++|+.|.++...... . ......... .+ ...
T Consensus 150 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~--~~~~~~~~~--------~~----~~~ 212 (247)
T 2jah_A 150 RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT---H--TATKEMYEQ--------RI----SQI 212 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC---C--HHHHHHHHH--------HT----TTS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc---c--hhhHHHHHh--------cc----ccc
Confidence 12458999999888877654 45899999999998775432110 0 000011100 01 111
Q ss_pred ceeehhhhhhHHHHHHHh
Q 037479 307 DVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~ 324 (492)
.++..+|+|++++.++..
T Consensus 213 ~~~~pedvA~~v~~l~s~ 230 (247)
T 2jah_A 213 RKLQAQDIAEAVRYAVTA 230 (247)
T ss_dssp CCBCHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHhCC
Confidence 257899999999998874
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=3.1e-16 Score=150.82 Aligned_cols=207 Identities=13% Similarity=0.177 Sum_probs=137.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ..++... ...++.+
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~~-------~~~~~~~ 87 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGL---KVVGCARTVGN---IEELA---------AECKSAG-------YPGTLIP 87 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHTT-------CSSEEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEECChHH---HHHHH---------HHHHhcC-------CCceEEE
Confidence 6889999999999999999999999996 56888886421 11111 1111110 0146888
Q ss_pred EecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHH----HHHHHHHHHhc
Q 037479 90 VPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFG----AKHVLNFSKKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~g----t~~ll~~a~~~ 151 (492)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.| ++.++..+++.
T Consensus 88 ~~~Dl~-------~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~ 160 (279)
T 1xg5_A 88 YRCDLS-------NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER 160 (279)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEecCC-------CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 999999 4444444443 79999999996532 24577889999999 66677777665
Q ss_pred ccc--eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 152 AKL--IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 152 ~~~--~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
+. .++|++||...+.... .
T Consensus 161 -~~~~g~iv~isS~~~~~~~~-------~--------------------------------------------------- 181 (279)
T 1xg5_A 161 -NVDDGHIININSMSGHRVLP-------L--------------------------------------------------- 181 (279)
T ss_dssp -TCCSCEEEEECCGGGTSCCS-------C---------------------------------------------------
T ss_pred -CCCCceEEEEcChhhcccCC-------C---------------------------------------------------
Confidence 43 6899999976543210 0
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.||+..|.+.+.+ ..++++++++|+.|.++..... .. ..... +...
T Consensus 182 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~---~~--~~~~~-~~~~------------ 241 (279)
T 1xg5_A 182 --SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKL---HD--KDPEK-AAAT------------ 241 (279)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHH---TT--TCHHH-HHHH------------
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhh---cc--cChhH-Hhhh------------
Confidence 12357999999988877643 3479999999999876542000 00 00011 1000
Q ss_pred CcccceeehhhhhhHHHHHHHh
Q 037479 303 KGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~ 324 (492)
.....+++++|+|++++.++..
T Consensus 242 ~~~~~~~~~~dvA~~i~~l~~~ 263 (279)
T 1xg5_A 242 YEQMKCLKPEDVAEAVIYVLST 263 (279)
T ss_dssp HC---CBCHHHHHHHHHHHHHS
T ss_pred cccccCCCHHHHHHHHHHHhcC
Confidence 0012367899999999998874
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=149.11 Aligned_cols=190 Identities=18% Similarity=0.163 Sum_probs=130.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+||||||+|+||++++++|++.|.+ |+++.|+... .+.+. ++ +..++.++.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~~~~ 54 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA---TYLTGRSESK---LSTVT-------------NC--------LSNNVGYRAR 54 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCHHH---HHHHH-------------HT--------CSSCCCEEEC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHH-------------HH--------HhhccCeEee
Confidence 68999999999999999999999964 5888886421 11111 11 1257888999
Q ss_pred CCCCCCCCCCchhhHHHhccCc----cEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--cceeEEE
Q 037479 93 DITREDLGVKDSNLREEMWNKL----DVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--KLIVLVH 159 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~v----d~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~~V~ 159 (492)
|++ +.+..+.+++++ |+|||+||.... .+.++..+++|+.|+.++++.+.... +-.++|+
T Consensus 55 D~~-------~~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~ 127 (230)
T 3guy_A 55 DLA-------SHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVM 127 (230)
T ss_dssp CTT-------CHHHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred cCC-------CHHHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 999 555555666544 999999996532 24577889999999999999886541 1228999
Q ss_pred eeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 160 VSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 160 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
+||...+... .....|+.
T Consensus 128 isS~~~~~~~--------------------------------------------------------------~~~~~Y~a 145 (230)
T 3guy_A 128 IMSTAAQQPK--------------------------------------------------------------AQESTYCA 145 (230)
T ss_dssp ECCGGGTSCC--------------------------------------------------------------TTCHHHHH
T ss_pred EeecccCCCC--------------------------------------------------------------CCCchhHH
Confidence 9996544221 23468999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhh
Q 037479 240 TKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 240 sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddv 314 (492)
||+..+.+.+.+ ..++++..++|+.|..+...... .......+++++|+
T Consensus 146 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------------------------~~~~~~~~~~~~dv 199 (230)
T 3guy_A 146 VKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG--------------------------KSLDTSSFMSAEDA 199 (230)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------------------------------CCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC--------------------------CCCCcccCCCHHHH
Confidence 999999888755 34899999999988765432100 00012357889999
Q ss_pred hhHHHHHHHh
Q 037479 315 VNAIVVAVVA 324 (492)
Q Consensus 315 a~~ii~~~~~ 324 (492)
|++++.++..
T Consensus 200 A~~i~~l~~~ 209 (230)
T 3guy_A 200 ALMIHGALAN 209 (230)
T ss_dssp HHHHHHHCCE
T ss_pred HHHHHHHHhC
Confidence 9999988763
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.5e-16 Score=159.11 Aligned_cols=224 Identities=14% Similarity=0.188 Sum_probs=154.2
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+-.+++||||||||+||.++++.|++.|. .+|+++.|+.......+.+.+++ .. ...++.
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l---------~~---------~g~~v~ 315 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGA--ERLVLTSRRGPEAPGAAELAEEL---------RG---------HGCEVV 315 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHH---------HT---------TTCEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC--cEEEEEecCCcccHHHHHHHHHH---------Hh---------cCCEEE
Confidence 44679999999999999999999999886 45788888764332222222111 11 125789
Q ss_pred EEecCCCCCCCCCCchhhHHHhccC--ccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNK--LDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
++.+|++ +.+.+..++++ +|+|||+||..... +.++..+++|+.|+.++.+++..+.++.+||+
T Consensus 316 ~~~~Dvt-------d~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~ 388 (511)
T 2z5l_A 316 HAACDVA-------ERDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVL 388 (511)
T ss_dssp EEECCSS-------CHHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEE
T ss_pred EEEeCCC-------CHHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEE
Confidence 9999999 55656677654 99999999976432 45678899999999999999876546789999
Q ss_pred eeecee-ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHH
Q 037479 160 VSTAFV-WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238 (492)
Q Consensus 160 vST~~v-~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~ 238 (492)
+||... +|.. ....|+
T Consensus 389 ~SS~a~~~g~~---------------------------------------------------------------g~~~Ya 405 (511)
T 2z5l_A 389 FSSVTGTWGNA---------------------------------------------------------------GQGAYA 405 (511)
T ss_dssp EEEGGGTTCCT---------------------------------------------------------------TBHHHH
T ss_pred EeCHHhcCCCC---------------------------------------------------------------CCHHHH
Confidence 999643 3321 235799
Q ss_pred HHHHHHHHHHHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhH
Q 037479 239 FTKVMGEMFIEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNA 317 (492)
Q Consensus 239 ~sK~~aE~~v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ 317 (492)
.+|+..|.+.... ..++++++++|+.+..... ... .....+. ......++.++++++
T Consensus 406 aaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm------~~~--~~~~~~~--------------~~g~~~l~~e~~a~~ 463 (511)
T 2z5l_A 406 AANAALDALAERRRAAGLPATSVAWGLWGGGGM------AAG--AGEESLS--------------RRGLRAMDPDAAVDA 463 (511)
T ss_dssp HHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTC------CCC--HHHHHHH--------------HHTBCCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEECCcccCCcc------ccc--ccHHHHH--------------hcCCCCCCHHHHHHH
Confidence 9999999998876 5689999999988732211 111 0000110 011246889999999
Q ss_pred HHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHH
Q 037479 318 IVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAY 356 (492)
Q Consensus 318 ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~ 356 (492)
+..++.... .. +.+. .+.|..+.....
T Consensus 464 l~~al~~~~------~~-v~v~-----~~d~~~~~~~~~ 490 (511)
T 2z5l_A 464 LLGAMGRND------VC-VTVV-----DVDWERFAPATN 490 (511)
T ss_dssp HHHHHHHTC------SE-EEEC-----CBCHHHHHHHHH
T ss_pred HHHHHhCCC------CE-EEEE-----eCCHHHHHhhhc
Confidence 999987421 22 2232 356877765543
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-15 Score=148.22 Aligned_cols=225 Identities=15% Similarity=0.099 Sum_probs=147.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE-ecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL-RAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv-R~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++|++|||||+|+||++++++|++.|+ +|+++. |+... .+.+. ..++.+. ..++.
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~ 63 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSAAE---ANALS---------ATLNARR--------PNSAI 63 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHH---HHHHH---------HHHHHHS--------TTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEcCCCHHH---HHHHH---------HHHhhhc--------CCeeE
Confidence 5789999999999999999999999996 568888 75321 11111 1121111 25688
Q ss_pred EEecCCCCCCC-------CCCc---hhhHHHhc-------cCccEEEEcccccCc---------------------chhH
Q 037479 89 LVPGDITREDL-------GVKD---SNLREEMW-------NKLDVVINLAATTNF---------------------DERY 130 (492)
Q Consensus 89 ~v~gDl~~~~l-------gl~~---~~~~~~~~-------~~vd~Vih~Aa~~~~---------------------~~~~ 130 (492)
++.+|+++++. |..+ .+..+.++ .++|++||+||.... .+.+
T Consensus 64 ~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (291)
T 1e7w_A 64 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETAT 143 (291)
T ss_dssp EEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHH
T ss_pred EEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHH
Confidence 99999996530 0000 00233333 379999999997532 3446
Q ss_pred HHHHHHhHHHHHHHHHHHHhcc---c------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHH
Q 037479 131 DVALDLNTFGAKHVLNFSKKCA---K------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQ 201 (492)
Q Consensus 131 ~~~~~~Nv~gt~~ll~~a~~~~---~------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (492)
+..+++|+.|+.++++++.... + ..++|++||...+...
T Consensus 144 ~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~-------------------------------- 191 (291)
T 1e7w_A 144 ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL-------------------------------- 191 (291)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC--------------------------------
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC--------------------------------
Confidence 7889999999999999876421 2 4689999996544221
Q ss_pred HHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCcc
Q 037479 202 ELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGW 276 (492)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw 276 (492)
.....|+.||+..+.+.+.+ ..++.+..|+|+.|..+. . .+
T Consensus 192 ------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~-- 237 (291)
T 1e7w_A 192 ------------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MP-- 237 (291)
T ss_dssp ------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SC--
T ss_pred ------------------------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CC--
Confidence 23468999999999888754 358999999999986554 2 10
Q ss_pred ccCcCchHHHHHhccCceeeEEecCCCccc-ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 277 AEGIRTIDSLAVGYGKGRLTCFLGDVKGIV-DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 277 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
......+... .... -+...+|+|++++.++....... . +.++++.++
T Consensus 238 -------~~~~~~~~~~---------~p~~~r~~~pedvA~~v~~l~s~~~~~i-t-G~~i~vdGG 285 (291)
T 1e7w_A 238 -------PAVWEGHRSK---------VPLYQRDSSAAEVSDVVIFLCSSKAKYI-T-GTCVKVDGG 285 (291)
T ss_dssp -------HHHHHHHHTT---------CTTTTSCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred -------HHHHHHHHhh---------CCCCCCCCCHHHHHHHHHHHhCCcccCc-c-CcEEEECCC
Confidence 1111111110 0111 35679999999999886433222 2 788998887
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.3e-16 Score=145.75 Aligned_cols=199 Identities=16% Similarity=0.149 Sum_probs=135.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.+ .+....+ ...++.+
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~~~------~~~~~~~ 63 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY---RVVLIARSKQN---LEKVHD---------EIMRSNK------HVQEPIV 63 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC---EEEEEESCHHH---HHHHHH---------HHHHHCT------TSCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHH---------HHHHhcc------ccCcceE
Confidence 5789999999999999999999999996 56888886432 122111 1111111 0156889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhc---cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF------DERYDVALDLNTFGAKHVLNFSKKC---AK 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (492)
+.+|++ +.+..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 64 ~~~Dv~-------~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 136 (250)
T 3nyw_A 64 LPLDIT-------DCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK 136 (250)
T ss_dssp EECCTT-------CHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EeccCC-------CHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 444444444 369999999997532 1457788999999999999987432 14
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
..++|++||....... .+
T Consensus 137 ~g~iv~isS~~~~~~~--------------------------------------------------------------~~ 154 (250)
T 3nyw_A 137 NGYIFNVASRAAKYGF--------------------------------------------------------------AD 154 (250)
T ss_dssp CEEEEEECC---------------------------------------------------------------------CC
T ss_pred CeEEEEEccHHhcCCC--------------------------------------------------------------CC
Confidence 4689999986543211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+.+.+ ..++++..++|+.|..+... .... ......+
T Consensus 155 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~-----------------~~~~---------~~~~~~~ 208 (250)
T 3nyw_A 155 GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK-----------------KAGT---------PFKDEEM 208 (250)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH-----------------HTTC---------CSCGGGS
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhh-----------------hcCC---------CcccccC
Confidence 468999999988887754 35899999999988654221 0000 0112347
Q ss_pred eehhhhhhHHHHHHHh
Q 037479 309 IPADMVVNAIVVAVVA 324 (492)
Q Consensus 309 v~vddva~~ii~~~~~ 324 (492)
++.+|+|++++.++..
T Consensus 209 ~~p~dva~~v~~l~s~ 224 (250)
T 3nyw_A 209 IQPDDLLNTIRCLLNL 224 (250)
T ss_dssp BCHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHcC
Confidence 8899999999998874
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=7.4e-16 Score=151.57 Aligned_cols=173 Identities=12% Similarity=0.111 Sum_probs=121.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|+||||||+||++++++|++.|.+| +++.|.........+...+ +... . ....++.++
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v---~~v~r~~~~~~~~~~~~~~---------~~~~-~-----~~~~~~~~~ 62 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQS---FKVYATLRDLKTQGRLWEA---------ARAL-A-----CPPGSLETL 62 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCC---EEEEEEESCGGGTHHHHHH---------HHHT-T-----CCTTSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCce---EEEEeecCcHHHHHHHHHH---------hhhc-c-----CCCCceEEE
Confidence 47899999999999999999999999765 6777765443222111100 0000 0 002568899
Q ss_pred ecCCCCCCCCCCchhhHHHhcc-----CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---ccce
Q 037479 91 PGDITREDLGVKDSNLREEMWN-----KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---AKLI 155 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~-----~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~ 155 (492)
.+|++ +.+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .+..
T Consensus 63 ~~Dv~-------d~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g 135 (327)
T 1jtv_A 63 QLDVR-------DSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG 135 (327)
T ss_dssp ECCTT-------CHHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred EecCC-------CHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 99999 5555556655 49999999996532 2457789999999999999986321 1457
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
++|++||...+... ....
T Consensus 136 ~IV~isS~~~~~~~--------------------------------------------------------------~~~~ 153 (327)
T 1jtv_A 136 RVLVTGSVGGLMGL--------------------------------------------------------------PFND 153 (327)
T ss_dssp EEEEEEEGGGTSCC--------------------------------------------------------------TTCH
T ss_pred EEEEECCcccccCC--------------------------------------------------------------CCCh
Confidence 99999996544211 1245
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCC
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~ 270 (492)
.|+.||+..|.+.+.+ ..++++++|+|+.|..+..
T Consensus 154 ~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~ 193 (327)
T 1jtv_A 154 VYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM 193 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence 8999999999988765 3589999999999887653
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-15 Score=145.37 Aligned_cols=211 Identities=13% Similarity=0.134 Sum_probs=140.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH----HHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA----TVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~----~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
+++|+++||||+|+||++++++|++.|. +|+++.|+...... .+.... .+.. ...
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~---------~~~~---------~~~ 62 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA---NVAIAAKSAVANPKLPGTIHSAAA---------AVNA---------AGG 62 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCSCCTTSCCCHHHHHH---------HHHH---------HTS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeccchhhhhhHHHHHHHHH---------HHHh---------cCC
Confidence 4789999999999999999999999996 56889997654211 111110 1111 136
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
++.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~~~~~Dv~-------~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 135 (274)
T 3e03_A 63 QGLALKCDIR-------EEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPH 135 (274)
T ss_dssp EEEEEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHH
Confidence 7899999999 4444444443 79999999997532 2457888999999999999987652
Q ss_pred ---ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 152 ---AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 152 ---~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
.+..++|++||........ +
T Consensus 136 m~~~~~g~iv~isS~~~~~~~~-------~-------------------------------------------------- 158 (274)
T 3e03_A 136 LLQAPNPHILTLAPPPSLNPAW-------W-------------------------------------------------- 158 (274)
T ss_dssp HTTSSSCEEEECCCCCCCCHHH-------H--------------------------------------------------
T ss_pred HHhcCCceEEEECChHhcCCCC-------C--------------------------------------------------
Confidence 1346899999965442210 0
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.+ ..++++..+.|+.+..+.. . . . .. ..
T Consensus 159 ---~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~---~---~-------~-----------~~--~~ 209 (274)
T 3e03_A 159 ---GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA---I---N-------M-----------LP--GV 209 (274)
T ss_dssp ---HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---------------------------------CC
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch---h---h-------h-----------cc--cc
Confidence 12357999999999888755 4589999999984332211 0 0 0 00 01
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEE
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIY 336 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy 336 (492)
....+...+|+|++++.++....... . |+++
T Consensus 210 ~~~~~~~pedvA~~v~~l~s~~~~~i-t-G~~i 240 (274)
T 3e03_A 210 DAAACRRPEIMADAAHAVLTREAAGF-H-GQFL 240 (274)
T ss_dssp CGGGSBCTHHHHHHHHHHHTSCCTTC-C-SCEE
T ss_pred cccccCCHHHHHHHHHHHhCcccccc-C-CeEE
Confidence 11235679999999999886432221 1 5666
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-15 Score=150.55 Aligned_cols=216 Identities=16% Similarity=0.180 Sum_probs=145.3
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH----HHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA----TVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~----~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
-++||+||||||+|+||++++++|++.|. +|+++.|+...... .+...++ +.. ..
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~~~~~~l~~~l~~~~~~---------~~~---------~g 100 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGA---NIVIAAKTAQPHPKLLGTIYTAAEE---------IEA---------VG 100 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESCCSCCSSSCCCHHHHHHH---------HHH---------TT
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCC---EEEEEECChhhhhhhHHHHHHHHHH---------HHh---------cC
Confidence 36789999999999999999999999996 56888887654221 1111111 111 12
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
.++.++.+|++ +++..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++..
T Consensus 101 ~~~~~~~~Dv~-------d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp 173 (346)
T 3kvo_A 101 GKALPCIVDVR-------DEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIP 173 (346)
T ss_dssp CEEEEEECCTT-------CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEccCC-------CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57889999999 4444445443 79999999997542 255788999999999999999854
Q ss_pred cc---cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 151 CA---KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 151 ~~---~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
.. +..++|++||....... .+
T Consensus 174 ~m~~~~~g~IV~iSS~~~~~~~-------~~------------------------------------------------- 197 (346)
T 3kvo_A 174 YLKKSKVAHILNISPPLNLNPV-------WF------------------------------------------------- 197 (346)
T ss_dssp HHTTCSSCEEEEECCCCCCCGG-------GT-------------------------------------------------
T ss_pred HHHHCCCCEEEEECCHHHcCCC-------CC-------------------------------------------------
Confidence 31 34689999996544321 00
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.+ ..++.+..+.|+.++.+. +...+.. ..
T Consensus 198 ----~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~----------------~~~~~~~---------~~ 248 (346)
T 3kvo_A 198 ----KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA----------------AMDMLGG---------PG 248 (346)
T ss_dssp ----SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH----------------HHHHHCC-----------
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH----------------HHHhhcc---------cc
Confidence 23468999999998888755 457999999998533211 1111110 01
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+..++|+|++++.++.. .... . |+++ +.++
T Consensus 249 ~~~r~~~pedvA~~v~~L~s~-~~~i-t-G~~i-vdgg 282 (346)
T 3kvo_A 249 IESQCRKVDIIADAAYSIFQK-PKSF-T-GNFV-IDEN 282 (346)
T ss_dssp CGGGCBCTHHHHHHHHHHHTS-CTTC-C-SCEE-EHHH
T ss_pred ccccCCCHHHHHHHHHHHHhc-CCCC-C-ceEE-ECCc
Confidence 122456789999999999875 3222 1 6665 5443
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.8e-15 Score=139.40 Aligned_cols=218 Identities=16% Similarity=0.130 Sum_probs=149.4
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
.+.|+||+++||||++-||+.++++|++.|. +|++..|+...... ....+
T Consensus 6 ~dlf~GK~alVTGas~GIG~aia~~la~~Ga---~Vv~~~~~~~~~~~---------------------------~~~~~ 55 (242)
T 4b79_A 6 HDIYAGQQVLVTGGSSGIGAAIAMQFAELGA---EVVALGLDADGVHA---------------------------PRHPR 55 (242)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTSTTS---------------------------CCCTT
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHhh---------------------------hhcCC
Confidence 3668999999999999999999999999996 55888887554221 01367
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhc---cCccEEEEcccccCc-----chhHHHHHHHhHHHHHHHHHHHHhcc--ccee
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMW---NKLDVVINLAATTNF-----DERYDVALDLNTFGAKHVLNFSKKCA--KLIV 156 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~---~~vd~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~ 156 (492)
+..+.+|+++ ++..++++ .++|++||+||.... .+.++..+++|+.|+..+.+++..+. +--+
T Consensus 56 ~~~~~~Dv~~-------~~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~ 128 (242)
T 4b79_A 56 IRREELDITD-------SQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGS 128 (242)
T ss_dssp EEEEECCTTC-------HHHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEE
T ss_pred eEEEEecCCC-------HHHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe
Confidence 8899999994 44444544 479999999997643 25688999999999999988876542 2258
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|.+||....... .....
T Consensus 129 IVnisS~~~~~~~--------------------------------------------------------------~~~~~ 146 (242)
T 4b79_A 129 ILNIASMYSTFGS--------------------------------------------------------------ADRPA 146 (242)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------------SSCHH
T ss_pred EEEEeeccccCCC--------------------------------------------------------------CCCHH
Confidence 9999996433111 12357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
|+.||+....+.+.. ..|+++..|-|+.|-.+...... ........+..... ..-+...
T Consensus 147 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~---~~~~~~~~~~~~~P-------------lgR~g~p 210 (242)
T 4b79_A 147 YSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK---ADVEATRRIMQRTP-------------LARWGEA 210 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C---CCHHHHHHHHHTCT-------------TCSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc---CCHHHHHHHHhcCC-------------CCCCcCH
Confidence 999999888877654 56899999999998766432211 11011111111111 1124567
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|+|++++.++.+...--. |+++.+.+|
T Consensus 211 eeiA~~v~fLaSd~a~~iT--G~~l~VDGG 238 (242)
T 4b79_A 211 PEVASAAAFLCGPGASFVT--GAVLAVDGG 238 (242)
T ss_dssp HHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred HHHHHHHHHHhCchhcCcc--CceEEECcc
Confidence 8999999998864433222 788888776
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=3.6e-15 Score=145.42 Aligned_cols=210 Identities=19% Similarity=0.163 Sum_probs=123.1
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
...++|+||||||+|+||++++++|++.|+ +|+++.|+.... +... ..+++.. ..++
T Consensus 8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~---~V~~~~r~~~~~---~~~~---------~~l~~~~--------~~~~ 64 (311)
T 3o26_A 8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGI---MVVLTCRDVTKG---HEAV---------EKLKNSN--------HENV 64 (311)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHHH---HHHH---------HHHHTTT--------CCSE
T ss_pred ccCCCcEEEEecCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHH---------HHHHhcC--------CCce
Confidence 345789999999999999999999999996 568988874321 1111 1121111 2578
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc----------------------------------
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF---------------------------------- 126 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~---------------------------------- 126 (492)
.++.+|++++ .+..+.++ .++|+|||+||....
T Consensus 65 ~~~~~Dl~~~------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (311)
T 3o26_A 65 VFHQLDVTDP------IATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELM 138 (311)
T ss_dssp EEEECCTTSC------HHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTE
T ss_pred EEEEccCCCc------HHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhccc
Confidence 9999999953 03232332 479999999997632
Q ss_pred ---chhHHHHHHHhHHHHHHHHHHHHhc---ccceeEEEeeeceeecccc-cceeccccCCCCCCCCCCCCCHHHHHHHH
Q 037479 127 ---DERYDVALDLNTFGAKHVLNFSKKC---AKLIVLVHVSTAFVWGEES-GMLYESSFKMGDTLNGASGLDIDVERQVV 199 (492)
Q Consensus 127 ---~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~V~vST~~v~~~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~ 199 (492)
.+.++..+++|+.|+.++++++... .+..++|++||........ ..-.++.+...+ ....+......
T Consensus 139 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 212 (311)
T 3o26_A 139 SETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGD------ALTEERIDMVV 212 (311)
T ss_dssp ECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGG------GCCHHHHHHHH
T ss_pred ccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhcccc------ccchhHHHHHH
Confidence 1345677999999999998887542 1346899999965443211 000000000000 01111111111
Q ss_pred HHHHHHHHhccCcHHHHHHHHhhhhccccccCC---CCchHHHHHHHHHHHHHHh---cCCCcEEEEeCCceecCC
Q 037479 200 EQELNELQAEGASEEAITLAMKDLGIKRAKIYG---WPNTYVFTKVMGEMFIEHL---KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~n~Y~~sK~~aE~~v~~~---~~~~~~~ivRPs~v~g~~ 269 (492)
....++.. -......+ ....|+.||+..+.+.+.+ ..++.+..+.|+.|..+.
T Consensus 213 ~~~~~~~~-----------------~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~ 271 (311)
T 3o26_A 213 NMLLKDFK-----------------ENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEM 271 (311)
T ss_dssp HHHHHHHH-----------------TTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGG
T ss_pred HHHHhhhh-----------------ccccccccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCC
Confidence 10000000 00000112 2368999999999998766 246999999999887654
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-15 Score=154.54 Aligned_cols=217 Identities=16% Similarity=0.141 Sum_probs=142.5
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+++++++||||+|.||.++++.|++.|. +|+++.|+... +.+.. +.+ ..++.
T Consensus 210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga---~Vvl~~r~~~~----~~l~~----------~~~----------~~~~~ 262 (454)
T 3u0b_A 210 PLDGKVAVVTGAARGIGATIAEVFARDGA---TVVAIDVDGAA----EDLKR----------VAD----------KVGGT 262 (454)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECGGGH----HHHHH----------HHH----------HHTCE
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHCCC---EEEEEeCCccH----HHHHH----------HHH----------HcCCe
Confidence 45789999999999999999999999985 56888886422 11110 001 12456
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc--------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN--------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~--------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
++.+|++++ +..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++.+++....
T Consensus 263 ~~~~Dvtd~-------~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~ 335 (454)
T 3u0b_A 263 ALTLDVTAD-------DAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGT 335 (454)
T ss_dssp EEECCTTST-------THHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTS
T ss_pred EEEEecCCH-------HHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 899999953 33333332 39999999997643 25678899999999999999987642
Q ss_pred --cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 153 --KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 153 --~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
+..+||++||.......
T Consensus 336 ~~~~g~iV~iSS~a~~~g~------------------------------------------------------------- 354 (454)
T 3u0b_A 336 IGEGGRVIGLSSMAGIAGN------------------------------------------------------------- 354 (454)
T ss_dssp SCTTCEEEEECCHHHHHCC-------------------------------------------------------------
T ss_pred hcCCCEEEEEeChHhCCCC-------------------------------------------------------------
Confidence 34689999996543211
Q ss_pred CCCCchHHHHHHHHHHHHH----Hh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIE----HL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~----~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..+.+.+ ++ ..++++..+.|+.|..+.....+... ....... ...
T Consensus 355 -~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~------------~~l 415 (454)
T 3u0b_A 355 -RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLAT------REVGRRL------------NSL 415 (454)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------------CHHHHHS------------BTT
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhh------HHHHHhh------------ccc
Confidence 124589999996555554 33 45899999999999876543221100 0111000 011
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+...+|+|+++..++........ ++++++.++
T Consensus 416 ~r~g~pedvA~~v~fL~s~~a~~it--G~~i~vdGG 449 (454)
T 3u0b_A 416 FQGGQPVDVAELIAYFASPASNAVT--GNTIRVCGQ 449 (454)
T ss_dssp SSCBCHHHHHHHHHHHHCGGGTTCC--SCEEEESSS
T ss_pred cCCCCHHHHHHHHHHHhCCccCCCC--CcEEEECCc
Confidence 1345689999999988864333222 889999876
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.3e-15 Score=142.65 Aligned_cols=222 Identities=13% Similarity=0.103 Sum_probs=138.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|++|||||||+||++++++|++.|+ +|+++.|+..... .+. + +... ..++..+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~---~~~-~---------l~~~---------~~~~~~~-- 54 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGH---TVACHDESFKQKD---ELE-A---------FAET---------YPQLKPM-- 54 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGSHH---HHH-H---------HHHH---------CTTSEEC--
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHH---HHH-H---------HHhc---------CCcEEEE--
Confidence 6899999999999999999999996 5688888754321 111 0 1111 1233333
Q ss_pred CCCCCCCCCCchhhHHHh---ccCccEEEEccccc-Cc-------chhHHHHHHHhHHHHHHHHHHHHhc---ccceeEE
Q 037479 93 DITREDLGVKDSNLREEM---WNKLDVVINLAATT-NF-------DERYDVALDLNTFGAKHVLNFSKKC---AKLIVLV 158 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~---~~~vd~Vih~Aa~~-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~~~~~V 158 (492)
|..+ -....+.+ +.++|++||+||.. .. .+.++..+++|+.|+.++++++... .+..++|
T Consensus 55 d~~~------v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 128 (254)
T 1zmt_A 55 SEQE------PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHII 128 (254)
T ss_dssp CCCS------HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHH------HHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 3321 11222222 24799999999976 21 1457888999999999999987532 1346899
Q ss_pred EeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHH
Q 037479 159 HVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238 (492)
Q Consensus 159 ~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~ 238 (492)
++||...+... .....|+
T Consensus 129 ~isS~~~~~~~--------------------------------------------------------------~~~~~Y~ 146 (254)
T 1zmt_A 129 FITSATPFGPW--------------------------------------------------------------KELSTYT 146 (254)
T ss_dssp EECCSTTTSCC--------------------------------------------------------------TTCHHHH
T ss_pred EECCcccccCC--------------------------------------------------------------CCchHHH
Confidence 99996544211 1245899
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 239 FTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 239 ~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
.||+..+.+.+.+ ..++++++++|+.|+|+...... ..+...........+... .....+...+|
T Consensus 147 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~-~T~~~~~~~~~~~~~~~~---------~p~~~~~~p~d 216 (254)
T 1zmt_A 147 SARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY-PTEPWKTNPEHVAHVKKV---------TALQRLGTQKE 216 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC-BHHHHTTCHHHHHHHHHH---------SSSSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccC-CCcccccChHHHHHHhcc---------CCCCCCcCHHH
Confidence 9999999888755 35899999999999887542210 000000000111111000 01113678999
Q ss_pred hhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 314 VVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 314 va~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|++++.++....... . ++++++.++
T Consensus 217 vA~~v~~l~s~~~~~~-t-G~~~~vdgG 242 (254)
T 1zmt_A 217 LGELVAFLASGSCDYL-T-GQVFWLAGG 242 (254)
T ss_dssp HHHHHHHHHTTSCGGG-T-TCEEEESTT
T ss_pred HHHHHHHHhCcccCCc-c-CCEEEECCC
Confidence 9999998886432211 1 789999887
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.4e-15 Score=145.69 Aligned_cols=218 Identities=15% Similarity=0.056 Sum_probs=137.4
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.-|+ |++|||||+|+||++++++|++.|+ +|+++.|+... .+.+. ++.. . ..++
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~---~V~~~~r~~~~---~~~~~-------------~~~~----~--~~~~ 71 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW---SLVLTGRREER---LQALA-------------GELS----A--KTRV 71 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHHT----T--TSCE
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------HHhh----c--CCcE
Confidence 3455 8999999999999999999999996 56888886321 11111 1100 0 0368
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc-------CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc-
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN-------KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC- 151 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~-------~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (492)
.++.+|++ +.+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 72 ~~~~~Dv~-------d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m 144 (272)
T 2nwq_A 72 LPLTLDVR-------DRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRL 144 (272)
T ss_dssp EEEECCTT-------CHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEcCCC-------CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999 5544545554 46999999997532 2457888999999988887776532
Q ss_pred --ccce-eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 152 --AKLI-VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 152 --~~~~-~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
.+.. ++|++||...+...
T Consensus 145 ~~~~~g~~IV~isS~~~~~~~----------------------------------------------------------- 165 (272)
T 2nwq_A 145 IAHGAGASIVNLGSVAGKWPY----------------------------------------------------------- 165 (272)
T ss_dssp HHHCTTCEEEEECCGGGTSCC-----------------------------------------------------------
T ss_pred HhcCCCcEEEEeCCchhccCC-----------------------------------------------------------
Confidence 1345 89999996544211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..|.+.+.+ ..++++++++|+.|.++..... . ....... .....
T Consensus 166 ---~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~---~---~~~~~~~--------~~~~~--- 225 (272)
T 2nwq_A 166 ---PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR---F---GGDQARY--------DKTYA--- 225 (272)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------------------------
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc---c---ccchHHH--------HHhhc---
Confidence 12458999999999998765 3579999999999887643110 0 0000000 00000
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+..+|+|++++.++....... +..+.+.++
T Consensus 226 -~~~~~~pedvA~~v~~l~s~~~~~~---g~~i~v~~~ 259 (272)
T 2nwq_A 226 -GAHPIQPEDIAETIFWIMNQPAHLN---INSLEIMPV 259 (272)
T ss_dssp -CCCCBCHHHHHHHHHHHHTSCTTEE---EEEEEEEET
T ss_pred -cCCCCCHHHHHHHHHHHhCCCccCc---cceEEEeec
Confidence 0124689999999999887422111 455555543
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.1e-14 Score=135.51 Aligned_cols=225 Identities=12% Similarity=0.147 Sum_probs=148.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.++++|++.|. +|++..|+.......+.+ .+. ..++..
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga---~Vv~~~r~~~~~~~~~~~-------------~~~---------~~~~~~ 59 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERA---IPVVFARHAPDGAFLDAL-------------AQR---------QPRATY 59 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCCHHHHHHH-------------HHH---------CTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCcccHHHHHHH-------------Hhc---------CCCEEE
Confidence 6899999999999999999999999995 568888876543222211 111 257889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhcc--cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF------DERYDVALDLNTFGAKHVLNFSKKCA--KL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~ 154 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.... +-
T Consensus 60 ~~~Dv~~-------~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~ 132 (258)
T 4gkb_A 60 LPVELQD-------DAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR 132 (258)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999994 43333333 479999999996432 25688899999999999988875431 12
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
-++|.+||....... ...
T Consensus 133 G~IVnisS~~~~~~~--------------------------------------------------------------~~~ 150 (258)
T 4gkb_A 133 GAIVNISSKTAVTGQ--------------------------------------------------------------GNT 150 (258)
T ss_dssp CEEEEECCTHHHHCC--------------------------------------------------------------SSC
T ss_pred CeEEEEeehhhccCC--------------------------------------------------------------CCc
Confidence 489999996543211 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+.+.. ..|+++..|-|+.|-.+..+. |.............+.... | ...-+.
T Consensus 151 ~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~----p----lg~R~g 219 (258)
T 4gkb_A 151 SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRN---WIATFEDPEAKLAEIAAKV----P----LGRRFT 219 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC--------------CHHHHHHTTC----T----TTTSCB
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhh---hhhcccChHHHHHHHHhcC----C----CCCCCc
Confidence 57999999888887654 568999999999987664421 1111111111111111100 0 001245
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+|+|++++.++.....--. |+++.+.+|
T Consensus 220 ~peeiA~~v~fLaS~~a~~iT--G~~i~VDGG 249 (258)
T 4gkb_A 220 TPDEIADTAVFLLSPRASHTT--GEWLFVDGG 249 (258)
T ss_dssp CHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcCcc--CCeEEECCC
Confidence 679999999998875433222 889999887
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=4.8e-15 Score=140.85 Aligned_cols=168 Identities=15% Similarity=0.125 Sum_probs=118.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHh---hCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILR---VQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~---~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
+++|+++||||+|+||++++++|++ .|. +|+++.|+... .+.+. ..++...+ ..+
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~~~-------~~~ 61 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS---VMLVSARSESM---LRQLK---------EELGAQQP-------DLK 61 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC---EEEEEESCHHH---HHHHH---------HHHHHHCT-------TSE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC---eEEEEeCCHHH---HHHHH---------HHHHhhCC-------CCe
Confidence 5689999999999999999999998 785 56888886421 11111 11221111 256
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhcc---------Ccc--EEEEcccccC---------c-chhHHHHHHHhHHHHHHHH
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWN---------KLD--VVINLAATTN---------F-DERYDVALDLNTFGAKHVL 145 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~---------~vd--~Vih~Aa~~~---------~-~~~~~~~~~~Nv~gt~~ll 145 (492)
+.++.+|+++ .+..+.+++ ++| ++||+||... . .+.++..+++|+.|+.+++
T Consensus 62 ~~~~~~Dv~~-------~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 134 (259)
T 1oaa_A 62 VVLAAADLGT-------EAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLT 134 (259)
T ss_dssp EEEEECCTTS-------HHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHH
T ss_pred EEEEecCCCC-------HHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999994 443333332 467 9999999742 1 2457789999999999999
Q ss_pred HHHHhcc-----cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Q 037479 146 NFSKKCA-----KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAM 220 (492)
Q Consensus 146 ~~a~~~~-----~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (492)
+++.... +..++|++||...+...
T Consensus 135 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------- 163 (259)
T 1oaa_A 135 SGTLNAFQDSPGLSKTVVNISSLCALQPY--------------------------------------------------- 163 (259)
T ss_dssp HHHHHTSCCCTTCEEEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHHHHhhccCCCceEEEEcCchhcCCC---------------------------------------------------
Confidence 9987642 23579999997554211
Q ss_pred hhhhccccccCCCCchHHHHHHHHHHHHHHh---cCCCcEEEEeCCceecC
Q 037479 221 KDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL---KENMSVAIVRPTIITGT 268 (492)
Q Consensus 221 ~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~---~~~~~~~ivRPs~v~g~ 268 (492)
.....|+.||+..+.+.+.+ -.++++..+.|+.|-.+
T Consensus 164 -----------~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~ 203 (259)
T 1oaa_A 164 -----------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred -----------CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc
Confidence 23468999999999988765 12489999999877543
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-16 Score=155.10 Aligned_cols=177 Identities=14% Similarity=0.056 Sum_probs=114.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCC----CCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQP----NVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~----~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.|+|+||||+||+|++++..|++.|. .+..|.++.|... .++...... .+. ...+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~----~~~~~g~~~------dl~-----------~~~~ 62 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA----MKALEGVVM------ELE-----------DCAF 62 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG----HHHHHHHHH------HHH-----------TTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc----hhhccchhh------hhh-----------cccc
Confidence 46899999999999999999999774 1236777776431 011110000 000 0111
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccce-eEEEeeece-
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLI-VLVHVSTAF- 164 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~V~vST~~- 164 (492)
.++ +|+. +.+....+++++|+|||+||..+. ..+....+++|+.+|+++++++++..+.+ +++++|+..
T Consensus 63 ~~~-~di~-------~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~ 134 (327)
T 1y7t_A 63 PLL-AGLE-------ATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPAN 134 (327)
T ss_dssp TTE-EEEE-------EESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred ccc-CCeE-------eccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchh
Confidence 112 4655 222234667899999999998753 34567789999999999999999872144 677766531
Q ss_pred eecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 165 VWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 165 v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
+.. .+.++..+ ...+.+.|+.||..+
T Consensus 135 ~~~----~~~~~~~~--------------------------------------------------~~~p~~~yg~tkl~~ 160 (327)
T 1y7t_A 135 TNA----LIAYKNAP--------------------------------------------------GLNPRNFTAMTRLDH 160 (327)
T ss_dssp HHH----HHHHHTCT--------------------------------------------------TSCGGGEEECCHHHH
T ss_pred hhH----HHHHHHcC--------------------------------------------------CCChhheeccchHHH
Confidence 000 01111000 013446799999999
Q ss_pred HHHHHHh--cCCCcEEEEeCCceecCCCC
Q 037479 245 EMFIEHL--KENMSVAIVRPTIITGTYKE 271 (492)
Q Consensus 245 E~~v~~~--~~~~~~~ivRPs~v~g~~~~ 271 (492)
|++...+ ..+++++++||+.|||+...
T Consensus 161 er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 161 NRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred HHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 9988766 34899999999999998763
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.61 E-value=3.6e-15 Score=142.58 Aligned_cols=226 Identities=14% Similarity=0.049 Sum_probs=144.9
Q ss_pred cCCCEEEEeCC--cchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGA--TGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGa--tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++|||| +|+||++++++|++.|. +|+++.|+... ..+.+. ++. ..++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~---~V~~~~r~~~~--~~~~~~-------------~~~--------~~~~ 58 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGA---QLVLTGFDRLR--LIQRIT-------------DRL--------PAKA 58 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC---EEEEEECSCHH--HHHHHH-------------TTS--------SSCC
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCC---EEEEEecChHH--HHHHHH-------------Hhc--------CCCc
Confidence 67899999999 99999999999999996 56888886421 011111 111 2467
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc----------CccEEEEcccccC--------c----chhHHHHHHHhHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN----------KLDVVINLAATTN--------F----DERYDVALDLNTFGAKHVL 145 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~----------~vd~Vih~Aa~~~--------~----~~~~~~~~~~Nv~gt~~ll 145 (492)
.++.+|++ +.+..+.+++ ++|++||+||... + .+.++..+++|+.|+.+++
T Consensus 59 ~~~~~Dv~-------~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 131 (269)
T 2h7i_A 59 PLLELDVQ-------NEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMA 131 (269)
T ss_dssp CEEECCTT-------CHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred eEEEccCC-------CHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHH
Confidence 88999999 4444444443 7999999999754 1 2456788999999999999
Q ss_pred HHHHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhh
Q 037479 146 NFSKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLG 224 (492)
Q Consensus 146 ~~a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (492)
+++.... .-.++|++||....+.
T Consensus 132 ~~~~~~~~~~g~iv~iss~~~~~~-------------------------------------------------------- 155 (269)
T 2h7i_A 132 KALLPIMNPGGSIVGMDFDPSRAM-------------------------------------------------------- 155 (269)
T ss_dssp HHHGGGEEEEEEEEEEECCCSSCC--------------------------------------------------------
T ss_pred HHHHHhhccCCeEEEEcCcccccc--------------------------------------------------------
Confidence 9997642 1248999998643211
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-CccccC-cC-chHHHHHhccCceee
Q 037479 225 IKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-PGWAEG-IR-TIDSLAVGYGKGRLT 296 (492)
Q Consensus 225 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~gw~~~-~~-~~~~~~~~~~~g~~~ 296 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.|-.+..... .+.... .. ....+...+..
T Consensus 156 -------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 224 (269)
T 2h7i_A 156 -------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQ---- 224 (269)
T ss_dssp -------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHH----
T ss_pred -------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhc----
Confidence 12467999999999888754 3589999999998865421100 000000 00 00000000000
Q ss_pred EEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 297 CFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 297 ~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+. .+.+...+|+|++++.++....... . |+++.+.++
T Consensus 225 ~~p~----~rr~~~p~dvA~~v~~L~s~~~~~i-t-G~~i~vdGG 263 (269)
T 2h7i_A 225 RAPI----GWNMKDATPVAKTVCALLSDWLPAT-T-GDIIYADGG 263 (269)
T ss_dssp HCTT----CCCTTCCHHHHHHHHHHHSSSCTTC-C-SEEEEESTT
T ss_pred cCCc----ccCCCCHHHHHHHHHHHhCchhccC-c-ceEEEecCC
Confidence 0000 0025567999999999886432222 2 788888876
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.3e-15 Score=140.66 Aligned_cols=166 Identities=15% Similarity=0.163 Sum_probs=117.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||+|+||++++++|++.|+ +|+++.|+... .+.+. ..++.. ..++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~---------~~~~~~ 58 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA---TVYITGRHLDT---LRVVA---------QEAQSL---------GGQCVP 58 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHH---------SSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHHc---------CCceEE
Confidence 5789999999999999999999999996 56888886321 11111 111111 256889
Q ss_pred EecCCCCCCCCCCchhhHHHh--------ccCccEEEEccc--cc--------Cc----chhHHHHHHHhHHHHHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEM--------WNKLDVVINLAA--TT--------NF----DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~--------~~~vd~Vih~Aa--~~--------~~----~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
+.+|+++ .+..+.+ ..++|++||+|| .. .+ .+.++..+++|+.|+.++.+.
T Consensus 59 ~~~Dv~~-------~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 131 (260)
T 2qq5_A 59 VVCDSSQ-------ESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVY 131 (260)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHH
Confidence 9999994 3333333 346899999994 22 11 245778899999999888777
Q ss_pred HHhc---ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhh
Q 037479 148 SKKC---AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLG 224 (492)
Q Consensus 148 a~~~---~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (492)
+... .+..++|++||...+..
T Consensus 132 ~~~~~~~~~~g~iv~isS~~~~~~-------------------------------------------------------- 155 (260)
T 2qq5_A 132 GARLMVPAGQGLIVVISSPGSLQY-------------------------------------------------------- 155 (260)
T ss_dssp HHHHHGGGTCCEEEEECCGGGTSC--------------------------------------------------------
T ss_pred HHHHHhhcCCcEEEEEcChhhcCC--------------------------------------------------------
Confidence 6431 13468999999654321
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 225 IKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 225 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
.+...|+.||+..|.+.+.+ ..++++++++|+.|..+.
T Consensus 156 -------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 -------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp -------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 12357999999999988755 358999999999987764
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-14 Score=142.85 Aligned_cols=211 Identities=17% Similarity=0.228 Sum_probs=134.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC------CcCHHHHHHHHhhcChhhHHHHHhcCCchhhhc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD------AKSATVRFHNEIIGKDLFRVLKEKNGTHLNALI 83 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~------~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (492)
+++|+++||||+|+||++++++|++.|. +|++..|... +....+.+.+ .++..
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga---~Vv~~~~~~~~~~~~R~~~~~~~~~~---------~l~~~--------- 65 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGA---LVVVNDLGGDFKGVGKGSSAADKVVE---------EIRRR--------- 65 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSCBCCSHHHHHHHH---------HHHHT---------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCcccccccCCHHHHHHHHH---------HHHhh---------
Confidence 5789999999999999999999999996 4577655321 1111222111 11111
Q ss_pred cCceEEEecCCCCCCCCCCchhhHHH---hccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc--
Q 037479 84 SEKITLVPGDITREDLGVKDSNLREE---MWNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-- 151 (492)
Q Consensus 84 ~~~v~~v~gDl~~~~lgl~~~~~~~~---~~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (492)
... +.+|+++..- -....+. ...++|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 66 ~~~---~~~D~~~~~~---~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 139 (319)
T 1gz6_A 66 GGK---AVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMK 139 (319)
T ss_dssp TCE---EEEECCCGGG---HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCe---EEEeCCCHHH---HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 011 2478885320 0011111 23479999999997542 1457788999999999998887432
Q ss_pred -ccceeEEEeeecee-ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 152 -AKLIVLVHVSTAFV-WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 152 -~~~~~~V~vST~~v-~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
.+..++|++||... ++.
T Consensus 140 ~~~~grIV~vsS~~~~~~~------------------------------------------------------------- 158 (319)
T 1gz6_A 140 KQNYGRIIMTASASGIYGN------------------------------------------------------------- 158 (319)
T ss_dssp HHTCEEEEEECCHHHHHCC-------------------------------------------------------------
T ss_pred HcCCCEEEEECChhhccCC-------------------------------------------------------------
Confidence 14579999999533 221
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+.+.+ ..++++.+++|+.+ .+... .. . .. .
T Consensus 159 --~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~---~~----~-~~-------------------~ 208 (319)
T 1gz6_A 159 --FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE---TV----M-PE-------------------D 208 (319)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG---GG----S-CH-------------------H
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc---cc----C-Ch-------------------h
Confidence 12357999999999888755 35899999999876 21110 00 0 00 0
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...++.++|+|.+++.++.. .... . +++|++.++
T Consensus 209 ~~~~~~p~dvA~~~~~l~s~-~~~~-t-G~~~~v~GG 242 (319)
T 1gz6_A 209 LVEALKPEYVAPLVLWLCHE-SCEE-N-GGLFEVGAG 242 (319)
T ss_dssp HHHHSCGGGTHHHHHHHTST-TCCC-C-SCEEEEETT
T ss_pred hhccCCHHHHHHHHHHHhCc-hhhc-C-CCEEEECCC
Confidence 11246789999999888764 2221 2 788888776
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.2e-14 Score=134.88 Aligned_cols=221 Identities=16% Similarity=0.080 Sum_probs=146.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.++++|++.|. +|++..|+... .+... +.+++. ..++..
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga---~Vvi~~~~~~~---~~~~~---------~~l~~~---------g~~~~~ 62 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA---RVILNDIRATL---LAESV---------DTLTRK---------GYDAHG 62 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEECCSCHHH---HHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH---------HHHHhc---------CCcEEE
Confidence 5899999999999999999999999996 55777775321 11111 112111 257889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-c---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK-C--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--- 151 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.. +
T Consensus 63 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~ 135 (255)
T 4g81_D 63 VAFDVTD-------ELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR 135 (255)
T ss_dssp CCCCTTC-------HHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999994 44443433 369999999997643 257899999999999999887644 2
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+-.++|.+||.......
T Consensus 136 ~~~G~IVnisS~~~~~~~-------------------------------------------------------------- 153 (255)
T 4g81_D 136 NSGGKIINIGSLTSQAAR-------------------------------------------------------------- 153 (255)
T ss_dssp TCCEEEEEECCGGGTSBC--------------------------------------------------------------
T ss_pred cCCCEEEEEeehhhcCCC--------------------------------------------------------------
Confidence 123589999996543221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..|+++..|-|+.|..+..... .+.-.....+...... .
T Consensus 154 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~~Pl-------------~ 217 (255)
T 4g81_D 154 PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTAL---IEDKQFDSWVKSSTPS-------------Q 217 (255)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHH---HTCHHHHHHHHHHSTT-------------C
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcc---cCCHHHHHHHHhCCCC-------------C
Confidence 12457999999888777654 5689999999999876543110 0000000011111111 1
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++.....--. |+++.+.+|
T Consensus 218 R~g~pediA~~v~fL~S~~a~~iT--G~~i~VDGG 250 (255)
T 4g81_D 218 RWGRPEELIGTAIFLSSKASDYIN--GQIIYVDGG 250 (255)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhCCCc--CCEEEECCC
Confidence 245578999999998864433222 888988876
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-14 Score=137.26 Aligned_cols=217 Identities=10% Similarity=0.038 Sum_probs=133.3
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE-E--ecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLL-L--RAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l-v--R~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+|+++||||+|+||++++++|++.|+ +|+++ . |+... .+.+. ++. .+..
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~r~~~~---~~~~~-------------~~~---------~~~~ 52 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGY---TVVCHDASFADAAE---RQRFE-------------SEN---------PGTI 52 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGSHHH---HHHHH-------------HHS---------TTEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCcCCHHH---HHHHH-------------HHh---------CCCc
Confidence 57999999999999999999999996 45777 4 65321 11111 110 1112
Q ss_pred EEecCCCCCCCCCCchhhHHHh---ccCccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 89 LVPGDITREDLGVKDSNLREEM---WNKLDVVINLAATTNF----------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~---~~~vd~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
.. |..+ -....+.+ +.++|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 53 ~~--~~~~------v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 124 (244)
T 1zmo_A 53 AL--AEQK------PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA 124 (244)
T ss_dssp EC--CCCC------GGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred cc--CHHH------HHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 11 2221 11222222 2479999999997543 1457789999999999999987532 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+..++|++||...+... .
T Consensus 125 ~~g~iv~isS~~~~~~~--------------------------------------------------------------~ 142 (244)
T 1zmo_A 125 GGASVIFITSSVGKKPL--------------------------------------------------------------A 142 (244)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCcEEEEECChhhCCCC--------------------------------------------------------------C
Confidence 35789999996544221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.+ ..++++.+++|+.|-.+.... | ..... ......+... ..+ ...
T Consensus 143 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~-~~~~~-~~~~~~~~~~---~~p-----~~r 209 (244)
T 1zmo_A 143 YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP---T-SDWEN-NPELRERVDR---DVP-----LGR 209 (244)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC---H-HHHHH-CHHHHHHHHH---HCT-----TCS
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc---c-ccccc-hHHHHHHHhc---CCC-----CCC
Confidence 2457999999999888755 358999999999886653200 0 00000 0111111000 000 113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++........ ++++.+.++
T Consensus 210 ~~~pe~vA~~v~~l~s~~~~~~t--G~~i~vdgG 241 (244)
T 1zmo_A 210 LGRPDEMGALITFLASRRAAPIV--GQFFAFTGG 241 (244)
T ss_dssp CBCHHHHHHHHHHHHTTTTGGGT--TCEEEESTT
T ss_pred CcCHHHHHHHHHHHcCccccCcc--CCEEEeCCC
Confidence 67899999999998864322211 778888776
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.5e-14 Score=147.37 Aligned_cols=168 Identities=16% Similarity=0.186 Sum_probs=126.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
++++|||||+|+||.++++.|++.|. .+|+++.|+.......+.+.+++ .. ...++.++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga--~~vvl~~R~~~~~~~~~~l~~~l---------~~---------~g~~v~~~~ 298 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGA--AHLVLTSRRGADAPGAAELRAEL---------EQ---------LGVRVTIAA 298 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEEEEEE
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCC--cEEEEEeCCCCChHHHHHHHHHH---------Hh---------cCCeEEEEE
Confidence 48999999999999999999999986 46788888754433333332221 11 136789999
Q ss_pred cCCCCCCCCCCchhhHHHhcc------CccEEEEccccc-Cc-------chhHHHHHHHhHHHHHHHHHHHHhcccceeE
Q 037479 92 GDITREDLGVKDSNLREEMWN------KLDVVINLAATT-NF-------DERYDVALDLNTFGAKHVLNFSKKCAKLIVL 157 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~-~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~ 157 (492)
+|++ +.+.+..+++ .+|+|||+||.. .. .+.++..+++|+.|+.++.+++... ...+|
T Consensus 299 ~Dvt-------d~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~i 370 (496)
T 3mje_A 299 CDAA-------DREALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAF 370 (496)
T ss_dssp CCTT-------CHHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEE
T ss_pred ccCC-------CHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEE
Confidence 9999 5555555554 489999999986 22 1457888999999999999999887 67899
Q ss_pred EEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchH
Q 037479 158 VHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTY 237 (492)
Q Consensus 158 V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y 237 (492)
|++||....-.. .....|
T Consensus 371 V~~SS~a~~~g~--------------------------------------------------------------~g~~~Y 388 (496)
T 3mje_A 371 VLFSSGAAVWGS--------------------------------------------------------------GGQPGY 388 (496)
T ss_dssp EEEEEHHHHTTC--------------------------------------------------------------TTCHHH
T ss_pred EEEeChHhcCCC--------------------------------------------------------------CCcHHH
Confidence 999995433211 123579
Q ss_pred HHHHHHHHHHHHHh-cCCCcEEEEeCCceecCC
Q 037479 238 VFTKVMGEMFIEHL-KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 238 ~~sK~~aE~~v~~~-~~~~~~~ivRPs~v~g~~ 269 (492)
+.+|+..+.+..+. ..|++++.|.|+.+.++.
T Consensus 389 aAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~g 421 (496)
T 3mje_A 389 AAANAYLDALAEHRRSLGLTASSVAWGTWGEVG 421 (496)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECEESSSC
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEECCcccCCc
Confidence 99999999988866 568999999999886543
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.58 E-value=5.7e-14 Score=130.86 Aligned_cols=219 Identities=15% Similarity=0.106 Sum_probs=145.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.+++.|.+.|. +|++..|+... ...+. +++. ..++..
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga---~Vvi~~r~~~~-~~~~~-------------~~~~---------g~~~~~ 60 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA---EVVCAARRAPD-ETLDI-------------IAKD---------GGNASA 60 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCCH-HHHHH-------------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC---EEEEEeCCcHH-HHHHH-------------HHHh---------CCcEEE
Confidence 6899999999999999999999999996 55788876431 11111 1111 257889
Q ss_pred EecCCCCCCCCCCchhhHHHhc--cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-cc---ccee
Q 037479 90 VPGDITREDLGVKDSNLREEMW--NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK-CA---KLIV 156 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~--~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~---~~~~ 156 (492)
+.+|++++. ..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.. +. +--+
T Consensus 61 ~~~Dv~d~~-------~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~ 133 (247)
T 4hp8_A 61 LLIDFADPL-------AAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGK 133 (247)
T ss_dssp EECCTTSTT-------TTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEccCCCHH-------HHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcE
Confidence 999999643 222333 379999999997643 256899999999999999887543 21 2358
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|.+||....... .....
T Consensus 134 IVnisS~~~~~g~--------------------------------------------------------------~~~~~ 151 (247)
T 4hp8_A 134 VVNIASLLSFQGG--------------------------------------------------------------IRVPS 151 (247)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------------SSCHH
T ss_pred EEEEechhhCCCC--------------------------------------------------------------CCChH
Confidence 9999995433111 12357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
|+.||+....+.+.. ..|+++..|-|+.|-.+..+.. .........+... .| ..-+-..
T Consensus 152 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~-------~~~~~~~~~~~~~----~P-----lgR~g~p 215 (247)
T 4hp8_A 152 YTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEAL-------RADAARNKAILER----IP-----AGRWGHS 215 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTSHHHHHHHHTT----CT-----TSSCBCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhc-------ccCHHHHHHHHhC----CC-----CCCCcCH
Confidence 999999888887654 5689999999999876543110 0000111111110 01 1124557
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|+|++++.++.+...--. |+++.+.+|
T Consensus 216 eeiA~~v~fLaSd~a~~iT--G~~i~VDGG 243 (247)
T 4hp8_A 216 EDIAGAAVFLSSAAADYVH--GAILNVDGG 243 (247)
T ss_dssp HHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred HHHHHHHHHHhCchhcCCc--CCeEEECcc
Confidence 8999999998864433222 788888876
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-13 Score=129.04 Aligned_cols=223 Identities=16% Similarity=0.122 Sum_probs=146.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.++++|.+.|. +|++..|++.. .+.+.++ +++ ...++..
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga---~Vv~~~~~~~~---~~~~~~~---------i~~---------~g~~~~~ 60 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS---IVVAVELLEDR---LNQIVQE---------LRG---------MGKEVLG 60 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHH---------TTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHHH---HHHHHHH---------HHh---------cCCcEEE
Confidence 5899999999999999999999999995 55777775322 2222211 111 1367889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN----F----DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|+++ ++..+.++ .++|++||+||... + .+.++..+++|+.|+..+.+.+....
T Consensus 61 ~~~Dvt~-------~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~ 133 (254)
T 4fn4_A 61 VKADVSK-------KKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLK 133 (254)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999994 44444443 47999999999642 2 15688999999999999988876531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+--++|.+||.......
T Consensus 134 ~~~G~IVnisS~~g~~~~-------------------------------------------------------------- 151 (254)
T 4fn4_A 134 QGKGVIVNTASIAGIRGG-------------------------------------------------------------- 151 (254)
T ss_dssp HTCEEEEEECCGGGTCSS--------------------------------------------------------------
T ss_pred cCCcEEEEEechhhcCCC--------------------------------------------------------------
Confidence 33589999996433111
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+....+.+.. ..|+++..|-|+.|-.+...... ............... + ..
T Consensus 152 ~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~------~~~~~~~~~~~~~~~------~--~~ 217 (254)
T 4fn4_A 152 FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSS------KPSELGMRTLTKLMS------L--SS 217 (254)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCS------SCCHHHHHHHHHHHT------T--CC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccccccc------CCcHHHHHHHHhcCC------C--CC
Confidence 12357999999888777654 56899999999998765432110 000000111000000 0 01
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++.+...--. |+++.+.+|
T Consensus 218 R~g~pediA~~v~fLaSd~a~~iT--G~~i~VDGG 250 (254)
T 4fn4_A 218 RLAEPEDIANVIVFLASDEASFVN--GDAVVVDGG 250 (254)
T ss_dssp CCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhcCCc--CCEEEeCCC
Confidence 234579999999998875443222 889998877
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=8e-14 Score=130.43 Aligned_cols=207 Identities=14% Similarity=0.164 Sum_probs=141.3
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+||||||++.||+.++++|++.|. +|++..|++. ++. ++ .++ ..++..+.
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga---~V~~~~~~~~------~~~-~~---------~~~---------~~~~~~~~ 53 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD---KVCFIDIDEK------RSA-DF---------AKE---------RPNLFYFH 53 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH-HH---------HTT---------CTTEEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHH-HH---------HHh---------cCCEEEEE
Confidence 48999999999999999999999996 5577777532 221 11 111 25688899
Q ss_pred cCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--cce
Q 037479 92 GDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--KLI 155 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~ 155 (492)
+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+++.... +-.
T Consensus 54 ~Dv~~-------~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G 126 (247)
T 3ged_A 54 GDVAD-------PLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKG 126 (247)
T ss_dssp CCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Confidence 99994 44443433 479999999997543 25688999999999999988776531 225
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
++|.+||....... ....
T Consensus 127 ~IInisS~~~~~~~--------------------------------------------------------------~~~~ 144 (247)
T 3ged_A 127 RIINIASTRAFQSE--------------------------------------------------------------PDSE 144 (247)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------------TTCH
T ss_pred cEEEEeecccccCC--------------------------------------------------------------CCCH
Confidence 89999986543211 1235
Q ss_pred hHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 236 TYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
.|+.||+..+.+.+.. .+++++..|-|+.|-.+..+.. ..........| -+...
T Consensus 145 ~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~---------~~~~~~~~Pl~-------------R~g~p 202 (247)
T 3ged_A 145 AYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF---------TQEDCAAIPAG-------------KVGTP 202 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C---------CHHHHHTSTTS-------------SCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH---------HHHHHhcCCCC-------------CCcCH
Confidence 7999999888776644 5689999999998865433211 11111111111 24567
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+|+|++++.++.. .-- + |+++.+.+|
T Consensus 203 ediA~~v~fL~s~-~~i--T-G~~i~VDGG 228 (247)
T 3ged_A 203 KDISNMVLFLCQQ-DFI--T-GETIIVDGG 228 (247)
T ss_dssp HHHHHHHHHHHHC-SSC--C-SCEEEESTT
T ss_pred HHHHHHHHHHHhC-CCC--C-CCeEEECcC
Confidence 9999999998863 211 2 889999887
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.57 E-value=7.2e-14 Score=132.65 Aligned_cols=225 Identities=14% Similarity=0.111 Sum_probs=147.0
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+-++||++|||||++-||+.++++|++.|. +|++..|++. ++.+ ..++. ..++
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga---~V~i~~r~~~------~l~~----------~~~~~--------g~~~ 77 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGA---RVFITGRRKD------VLDA----------AIAEI--------GGGA 77 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHH----------HHHHH--------CTTC
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHHH----------HHHHc--------CCCe
Confidence 447889999999999999999999999996 5688888642 2221 11111 3567
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
..+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+....
T Consensus 78 ~~~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~ 150 (273)
T 4fgs_A 78 VGIQADSAN-------LAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA 150 (273)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEE
T ss_pred EEEEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 889999994 44443433 369999999997542 25789999999999999999887643
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|.+||....... .
T Consensus 151 ~~G~IInisS~~~~~~~--------------------------------------------------------------~ 168 (273)
T 4fgs_A 151 RGSSVVLTGSTAGSTGT--------------------------------------------------------------P 168 (273)
T ss_dssp EEEEEEEECCGGGGSCC--------------------------------------------------------------T
T ss_pred hCCeEEEEeehhhccCC--------------------------------------------------------------C
Confidence 23478999885433111 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+....+.+.. ..|+++..|-|+.|-.+......+ ........+...+... .| ..-
T Consensus 169 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~--~~~~~~~~~~~~~~~~----~P-----lgR 237 (273)
T 4fgs_A 169 AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAG--KDPVQQQGLLNALAAQ----VP-----MGR 237 (273)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-----------CHHHHHHHHHHHHHH----ST-----TSS
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhc--cCchhhHHHHHHHHhc----CC-----CCC
Confidence 2357999999988887654 468999999999887654321110 0000001111111110 01 012
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++.+...--. |+++.+.+|
T Consensus 238 ~g~peeiA~~v~FLaSd~a~~iT--G~~i~VDGG 269 (273)
T 4fgs_A 238 VGRAEEVAAAALFLASDDSSFVT--GAELFVDGG 269 (273)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCcc--CCeEeECcC
Confidence 45579999999998875443222 888888877
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.1e-13 Score=131.05 Aligned_cols=241 Identities=13% Similarity=0.079 Sum_probs=138.0
Q ss_pred cCCCEEEEeCCc--chhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGAT--GFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGat--GflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++||||+ |+||++++++|++.|. +|+++.|+.......+... ....+.+ ++... ....+..
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~-----~~~~~~~-~~~~~---~~~~~~~ 73 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA---EILVGTWVPALNIFETSLR-----RGKFDQS-RVLPD---GSLMEIK 73 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEEEHHHHHHHHHHHH-----TTTTTGG-GBCTT---SSBCCEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCC---eEEEeeccccchhhhhhhh-----hhHhhhh-hhhcc---ccccccc
Confidence 578999999999 9999999999999996 5577776421000000000 0000000 00000 0000112
Q ss_pred EEEecCCCCC---CCCC--Cc--------hhhHHHh-------ccCccEEEEcccccC-----c----chhHHHHHHHhH
Q 037479 88 TLVPGDITRE---DLGV--KD--------SNLREEM-------WNKLDVVINLAATTN-----F----DERYDVALDLNT 138 (492)
Q Consensus 88 ~~v~gDl~~~---~lgl--~~--------~~~~~~~-------~~~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv 138 (492)
..+.+|+.-. ++.. ++ .+..+.+ +.++|++||+||... + .+.++..+++|+
T Consensus 74 ~~~~~~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~ 153 (297)
T 1d7o_A 74 KVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASS 153 (297)
T ss_dssp EEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred cccccceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhh
Confidence 3333332100 0000 00 1112222 237999999998532 1 245778999999
Q ss_pred HHHHHHHHHHHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHH
Q 037479 139 FGAKHVLNFSKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAIT 217 (492)
Q Consensus 139 ~gt~~ll~~a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (492)
.|+.++++++.... .-.++|++||........
T Consensus 154 ~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------------------------------------------- 186 (297)
T 1d7o_A 154 YSFVSLLSHFLPIMNPGGASISLTYIASERIIP----------------------------------------------- 186 (297)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT-----------------------------------------------
T ss_pred hHHHHHHHHHHHHhccCceEEEEeccccccCCC-----------------------------------------------
Confidence 99999999997642 125899999865432110
Q ss_pred HHHhhhhccccccCCCCchHHHHHHHHHHHHHHh----c--CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc
Q 037479 218 LAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL----K--ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG 291 (492)
Q Consensus 218 ~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~----~--~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~ 291 (492)
.....|+.||+..+.+.+.+ . .++++..++|+.|.++..... .....+...+.
T Consensus 187 --------------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~ 245 (297)
T 1d7o_A 187 --------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSY 245 (297)
T ss_dssp --------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHH
T ss_pred --------------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc-------cccHHHHHHhh
Confidence 11247999999998887654 2 589999999999988764321 01111111111
Q ss_pred CceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 292 KGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 292 ~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
... ....+..++|+|++++.++....... . ++++++.++
T Consensus 246 ~~~---------p~~r~~~pedvA~~v~~l~s~~~~~i-t-G~~i~vdgG 284 (297)
T 1d7o_A 246 NNA---------PIQKTLTADEVGNAAAFLVSPLASAI-T-GATIYVDNG 284 (297)
T ss_dssp HHS---------SSCCCBCHHHHHHHHHHHTSGGGTTC-C-SCEEEESTT
T ss_pred ccC---------CCCCCCCHHHHHHHHHHHhCccccCC-C-CCEEEECCC
Confidence 100 01135678999999998876433222 2 789999887
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-13 Score=144.07 Aligned_cols=224 Identities=15% Similarity=0.131 Sum_probs=148.1
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE-EecCCC----------cCHHHHHHHHhhcChhhHHHHHhcCC
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLL-LRAADA----------KSATVRFHNEIIGKDLFRVLKEKNGT 77 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l-vR~~~~----------~~~~~r~~~~~~~~~~f~~l~~~~~~ 77 (492)
+-.++++|||||+|.||.++++.|++.|.. +|+++ .|+... ....+.+.+ .+..
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~--~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~---------~l~~---- 312 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAG--HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVA---------ELAD---- 312 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCC--EEEEEECCCC---------------CHHHHH---------HHHH----
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCC--EEEEEeCCCCCCccccccccccCHHHHHHHH---------HHHh----
Confidence 456899999999999999999999999963 35666 676432 111111111 1111
Q ss_pred chhhhccCceEEEecCCCCCCCCCCchhhHHHhcc------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHH
Q 037479 78 HLNALISEKITLVPGDITREDLGVKDSNLREEMWN------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHV 144 (492)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~l 144 (492)
...++.++.+|++ +.+.+..+++ .+|+|||+||.... .+.++..+++|+.|+.++
T Consensus 313 -----~g~~v~~~~~Dvt-------d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L 380 (525)
T 3qp9_A 313 -----LGATATVVTCDLT-------DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHL 380 (525)
T ss_dssp -----HTCEEEEEECCTT-------SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -----cCCEEEEEECCCC-------CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHH
Confidence 1367899999999 5555556654 47999999997642 245788899999999999
Q ss_pred HHHHHhccc----ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Q 037479 145 LNFSKKCAK----LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAM 220 (492)
Q Consensus 145 l~~a~~~~~----~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (492)
.+++..... ..+||++||.......
T Consensus 381 ~~~~~~~~~~~~~~~~iV~~SS~a~~~g~--------------------------------------------------- 409 (525)
T 3qp9_A 381 DRLLREAAAAGGRPPVLVLFSSVAAIWGG--------------------------------------------------- 409 (525)
T ss_dssp HHHHHHTC----CCCEEEEEEEGGGTTCC---------------------------------------------------
T ss_pred HHHhccccccCCCCCEEEEECCHHHcCCC---------------------------------------------------
Confidence 999987631 6789999996543211
Q ss_pred hhhhccccccCCCCchHHHHHHHHHHHHHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEe
Q 037479 221 KDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFL 299 (492)
Q Consensus 221 ~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~ 299 (492)
.....|+.+|+..+.+..+. ..|++++.|.|+.+-+... .. ......+.. .
T Consensus 410 -----------~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~-------~~-~~~~~~~~~--~------- 461 (525)
T 3qp9_A 410 -----------AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRV-------TE-GATGERLRR--L------- 461 (525)
T ss_dssp -----------TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGG-------GS-SHHHHHHHH--T-------
T ss_pred -----------CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccc-------cc-hhhHHHHHh--c-------
Confidence 12357999999999987665 4589999999998822111 00 111111111 0
Q ss_pred cCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHH
Q 037479 300 GDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYA 355 (492)
Q Consensus 300 ~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~ 355 (492)
....++.+++++++..++.... ..+. + ..+.|..+....
T Consensus 462 -----g~~~l~pee~a~~l~~~l~~~~------~~v~-v-----~~~dw~~~~~~~ 500 (525)
T 3qp9_A 462 -----GLRPLAPATALTALDTALGHGD------TAVT-I-----ADVDWSSFAPGF 500 (525)
T ss_dssp -----TBCCBCHHHHHHHHHHHHHHTC------SEEE-E-----CCBCHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHHHhCCC------CeEE-E-----EeCCHHHHHhhc
Confidence 1135789999999999987421 2222 2 235687776554
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.53 E-value=6.1e-13 Score=125.99 Aligned_cols=222 Identities=15% Similarity=0.075 Sum_probs=145.6
Q ss_pred cCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
++||+++||||+| -||+.++++|.+.|. +|++..|+.... +.+.+++ ++. -..++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga---~Vvi~~r~~~~~---~~~~~~~----------~~~-------~~~~~ 60 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA---KLVFTYRKERSR---KELEKLL----------EQL-------NQPEA 60 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC---EEEEEESSGGGH---HHHHHHH----------GGG-------TCSSC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHHHHH----------Hhc-------CCCcE
Confidence 5799999999987 799999999999996 568888875432 2222111 111 12578
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
..+.+|+++ ++..+.++ .++|++||+||.... .+.+...+++|+.++..+.+.+.
T Consensus 61 ~~~~~Dv~~-------~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 133 (256)
T 4fs3_A 61 HLYQIDVQS-------DEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAK 133 (256)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEEccCCC-------HHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999994 33333333 479999999996532 13456678899999998888876
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... +--++|.+||.......
T Consensus 134 ~~~~~~G~IVnisS~~~~~~~----------------------------------------------------------- 154 (256)
T 4fs3_A 134 KLMPEGGSIVATTYLGGEFAV----------------------------------------------------------- 154 (256)
T ss_dssp TTCTTCEEEEEEECGGGTSCC-----------------------------------------------------------
T ss_pred HHhccCCEEEEEeccccccCc-----------------------------------------------------------
Confidence 542 23489999985432111
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+... ........+... .|
T Consensus 155 ---~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~-------~~~~~~~~~~~~----~P---- 216 (256)
T 4fs3_A 155 ---QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG-------GFNTILKEIKER----AP---- 216 (256)
T ss_dssp ---TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-------THHHHHHHHHHH----ST----
T ss_pred ---ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc-------CCHHHHHHHHhc----CC----
Confidence 23458999999888877654 46899999999988765432211 112222221111 01
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|++++.++.+...--. |+++.+.+|
T Consensus 217 -l~R~g~peevA~~v~fL~Sd~a~~iT--G~~i~VDGG 251 (256)
T 4fs3_A 217 -LKRNVDQVEVGKTAAYLLSDLSSGVT--GENIHVDSG 251 (256)
T ss_dssp -TSSCCCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred -CCCCcCHHHHHHHHHHHhCchhcCcc--CCEEEECcC
Confidence 01245578999999998864433222 888888876
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=7.8e-13 Score=125.17 Aligned_cols=219 Identities=17% Similarity=0.133 Sum_probs=141.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++-||+.++++|++.|. +|++..|++.... .+...
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~~~~-------------------------------~~~~~ 54 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGA---QVLTTARARPEGL-------------------------------PEELF 54 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTC---EEEEEESSCCTTS-------------------------------CTTTE
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCC---EEEEEECCchhCC-------------------------------CcEEE
Confidence 5899999999999999999999999996 5688888654211 22346
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC-----c----chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN-----F----DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
+.+|+++ ++..+.++ .++|++||+||... + .+.++..+++|+.|+..+.+.+....
T Consensus 55 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 127 (261)
T 4h15_A 55 VEADLTT-------KEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMV 127 (261)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhh
Confidence 8899994 33333332 46999999998542 1 25678899999999999888775421
Q ss_pred --cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 153 --KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 153 --~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
+-.++|.+||....-.. |
T Consensus 128 ~~~~G~Iv~isS~~~~~~~---------~--------------------------------------------------- 147 (261)
T 4h15_A 128 ARGSGVVVHVTSIQRVLPL---------P--------------------------------------------------- 147 (261)
T ss_dssp HHTCEEEEEECCGGGTSCC---------T---------------------------------------------------
T ss_pred hcCCceEEEEEehhhccCC---------C---------------------------------------------------
Confidence 33589999985432110 0
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccc-----cCcCchHHHHHhccCceeeEEec
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWA-----EGIRTIDSLAVGYGKGRLTCFLG 300 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~-----~~~~~~~~~~~~~~~g~~~~~~~ 300 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+......... .........+...... .|
T Consensus 148 -~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~P- 221 (261)
T 4h15_A 148 -ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGG----IP- 221 (261)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTC----CT-
T ss_pred -CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcC----CC-
Confidence 12357999999888877654 46899999999988654321000000 0000001111111110 00
Q ss_pred CCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 301 ~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|++++.++.....-- + |+++.+.+|
T Consensus 222 ----lgR~g~peevA~~v~fLaS~~a~~i-t-G~~i~VDGG 256 (261)
T 4h15_A 222 ----LGRPAKPEEVANLIAFLASDRAASI-T-GAEYTIDGG 256 (261)
T ss_dssp ----TSSCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred ----CCCCcCHHHHHHHHHHHhCchhcCc-c-CcEEEECCc
Confidence 1124567999999998886443322 2 889998877
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.44 E-value=6.2e-13 Score=141.38 Aligned_cols=209 Identities=10% Similarity=0.080 Sum_probs=127.2
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC------CcCHHHHHHHHhhcChhhHHHHHhcCCchhhh
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD------AKSATVRFHNEIIGKDLFRVLKEKNGTHLNAL 82 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~------~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~ 82 (492)
-++||+++||||+|.||++++++|++.|. +|+++.|... .....+.+.+ .++..
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga---~Vv~~~r~~~~~~~~~~~~~~~~~~~---------~i~~~-------- 75 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGA---KVVVNDLGGTHSGDGASQRAADIVVD---------EIRKA-------- 75 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEC--------------CHHHHHH---------HHHHT--------
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcccccccCCHHHHHHHHH---------HHHHh--------
Confidence 36899999999999999999999999996 5577777221 1111111111 11111
Q ss_pred ccCceEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHH
Q 037479 83 ISEKITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a 148 (492)
... +.+|+++. +..+.++ .++|++||+||.... .+.++..+++|+.|+.++++++
T Consensus 76 -~~~---~~~D~~d~-------~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~ 144 (613)
T 3oml_A 76 -GGE---AVADYNSV-------IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAA 144 (613)
T ss_dssp -TCC---EEECCCCG-------GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCe---EEEEeCCH-------HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 011 23688743 2233333 368999999997642 2567889999999999999988
Q ss_pred Hhc---ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhc
Q 037479 149 KKC---AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGI 225 (492)
Q Consensus 149 ~~~---~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (492)
... .+..++|++||.......
T Consensus 145 ~p~m~~~~~g~IV~isS~a~~~~~-------------------------------------------------------- 168 (613)
T 3oml_A 145 FPYMKKQNYGRIIMTSSNSGIYGN-------------------------------------------------------- 168 (613)
T ss_dssp HHHHHTTTCEEEEEECCHHHHHCC--------------------------------------------------------
T ss_pred HHHHHHcCCCEEEEECCHHHcCCC--------------------------------------------------------
Confidence 432 134689999995433111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEec
Q 037479 226 KRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300 (492)
Q Consensus 226 ~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~ 300 (492)
.....|+.||+..+.+.+.+ ..|+.+..|.|+.+..... ++ .. .
T Consensus 169 ------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~----~~----~~--~--------------- 217 (613)
T 3oml_A 169 ------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTE----GI----LP--D--------------- 217 (613)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------C----CC----CC--H---------------
T ss_pred ------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhh----hc----cc--h---------------
Confidence 12357999999999887755 4589999999986422111 00 00 0
Q ss_pred CCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 301 ~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.....+..+|+|++++.++... ... . |.++++.+|
T Consensus 218 ---~~~~~~~pedvA~~v~~L~s~~-~~~-t-G~~i~vdGG 252 (613)
T 3oml_A 218 ---ILFNELKPKLIAPVVAYLCHES-CED-N-GSYIESAAG 252 (613)
T ss_dssp ---HHHTTCCGGGTHHHHHHTTSTT-CCC-C-SCEEEEETT
T ss_pred ---hhhhcCCHHHHHHHHHHhcCCC-cCC-C-ceEEEECCC
Confidence 0112347899999998887643 222 2 778887655
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.2e-12 Score=123.67 Aligned_cols=249 Identities=11% Similarity=-0.006 Sum_probs=120.8
Q ss_pred cCCCEEEEeCC--cchhhHHHHHHHHhhCCCCCeEEEEEecC--------CCcCHHHHHHHHhhcC---hhhHHHHHhcC
Q 037479 10 LENKTILVTGA--TGFLAKIFVEKILRVQPNVKKLYLLLRAA--------DAKSATVRFHNEIIGK---DLFRVLKEKNG 76 (492)
Q Consensus 10 ~~~~~vlITGa--tGflG~~l~~~Ll~~g~~V~~i~~lvR~~--------~~~~~~~r~~~~~~~~---~~f~~l~~~~~ 76 (492)
+++|+++|||| +|+||++++++|++.|. +|+++.|+. ......+... ++... ..-..+++..+
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 82 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGA---RVLVGTWPPVYSIFKKGLESSRFEQDS-FYAQEPSSKVAAEAAEKPV 82 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTC---EEEEEECHHHHHHHHC-------------------------------
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCC---EEEEEeccccccchhhhhhhhhhhhhh-hhhcchhhhHHHHhhhccc
Confidence 57899999999 89999999999999996 557777642 0000000000 00000 00000100000
Q ss_pred CchhhhccCceEEEecCC--CCCC-CC--CCc--------hhhHHHh-------ccCccEEEEcccccC-----c----c
Q 037479 77 THLNALISEKITLVPGDI--TRED-LG--VKD--------SNLREEM-------WNKLDVVINLAATTN-----F----D 127 (492)
Q Consensus 77 ~~~~~~~~~~v~~v~gDl--~~~~-lg--l~~--------~~~~~~~-------~~~vd~Vih~Aa~~~-----~----~ 127 (492)
....+..+.+|+ +++. +- +++ .+..+.+ +.++|++||+||... + .
T Consensus 83 ------~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~ 156 (319)
T 2ptg_A 83 ------DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSR 156 (319)
T ss_dssp --------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCH
T ss_pred ------cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCH
Confidence 000123444443 2211 00 000 1112222 237999999998541 1 1
Q ss_pred hhHHHHHHHhHHHHHHHHHHHHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 037479 128 ERYDVALDLNTFGAKHVLNFSKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNEL 206 (492)
Q Consensus 128 ~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (492)
+.++..+++|+.|+.++++++.... .-.++|++||........
T Consensus 157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~------------------------------------ 200 (319)
T 2ptg_A 157 KGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP------------------------------------ 200 (319)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------------------------
T ss_pred HHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccC------------------------------------
Confidence 4577889999999999999987642 125899999865432110
Q ss_pred HhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh----c--CCCcEEEEeCCceecCCCCCCCccccCc
Q 037479 207 QAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL----K--ENMSVAIVRPTIITGTYKEPFPGWAEGI 280 (492)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~----~--~~~~~~ivRPs~v~g~~~~p~~gw~~~~ 280 (492)
.....|+.||+..+.+.+.+ . .++++..|+|+.|..+....... .
T Consensus 201 -------------------------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~---~- 251 (319)
T 2ptg_A 201 -------------------------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGK---A- 251 (319)
T ss_dssp -------------------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC--------------
T ss_pred -------------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhccc---c-
Confidence 11246999998888777643 2 58999999999987654321100 0
Q ss_pred CchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 281 RTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 281 ~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+...... .+ .......-+...+|+|++++.++....... . +.++.+.++
T Consensus 252 -~~~~~~~~~~~----~~-~~~~p~~r~~~peevA~~v~~L~s~~~~~i-t-G~~i~vdGG 304 (319)
T 2ptg_A 252 -GDKTFIDLAID----YS-EANAPLQKELESDDVGRAALFLLSPLARAV-T-GATLYVDNG 304 (319)
T ss_dssp ---------------------------CCCHHHHHHHHHHHTSGGGTTC-C-SCEEEESTT
T ss_pred -cchhhHHHHHH----HH-hccCCCCCCCCHHHHHHHHHHHhCcccCCc-c-CCEEEECCC
Confidence 00000000000 00 000011135678999999998886433222 2 788998887
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.32 E-value=4.7e-11 Score=117.34 Aligned_cols=185 Identities=8% Similarity=0.003 Sum_probs=114.9
Q ss_pred CCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 11 ENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 11 ~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
++|+++||||++ .||.+++++|++.|. +|++..|+.... ...|-.... .. ...... ........+.
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~---~Vv~~~~~~~~~-l~~r~~~~~-~~-----~~~~~~--~~~~~~~~~~ 68 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNV---KIIFGIWPPVYN-IFMKNYKNG-KF-----DNDMII--DKDKKMNILD 68 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEECHHHHH-HHHHHHHTT-TT-----TGGGBC--SSSCBCCEEE
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCC---EEEEEecCcccc-ccccchHHH-HH-----HHHHHH--hhcccccccc
Confidence 478999999875 999999999999996 457666543100 000000000 00 000000 0000124478
Q ss_pred EEecCCCCCCCC-------------CCchhhHHHhc-------cCccEEEEcccccC-----c----chhHHHHHHHhHH
Q 037479 89 LVPGDITREDLG-------------VKDSNLREEMW-------NKLDVVINLAATTN-----F----DERYDVALDLNTF 139 (492)
Q Consensus 89 ~v~gDl~~~~lg-------------l~~~~~~~~~~-------~~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv~ 139 (492)
.+.+|++..... +++.+....++ ..+|++||+||... + .+.++..+++|+.
T Consensus 69 ~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~ 148 (329)
T 3lt0_A 69 MLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSY 148 (329)
T ss_dssp EEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhH
Confidence 899999876211 11111222222 36999999999631 1 2457889999999
Q ss_pred HHHHHHHHHHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHH
Q 037479 140 GAKHVLNFSKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITL 218 (492)
Q Consensus 140 gt~~ll~~a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (492)
|+..+.+++.... .-.++|++||.......
T Consensus 149 g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~------------------------------------------------- 179 (329)
T 3lt0_A 149 SLISLCKYFVNIMKPQSSIISLTYHASQKVV------------------------------------------------- 179 (329)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSCC-------------------------------------------------
T ss_pred HHHHHHHHHHHHHhhCCeEEEEeCccccCCC-------------------------------------------------
Confidence 9999999987642 11489999986533211
Q ss_pred HHhhhhccccccCCCCc-hHHHHHHHHHHHHHHh-----c-CCCcEEEEeCCceecCC
Q 037479 219 AMKDLGIKRAKIYGWPN-TYVFTKVMGEMFIEHL-----K-ENMSVAIVRPTIITGTY 269 (492)
Q Consensus 219 ~~~~~~~~~~~~~~~~n-~Y~~sK~~aE~~v~~~-----~-~~~~~~ivRPs~v~g~~ 269 (492)
.... .|+.||+..+.+.+.. . .++.+..+.|+.|-.+.
T Consensus 180 -------------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~ 224 (329)
T 3lt0_A 180 -------------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 224 (329)
T ss_dssp -------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_pred -------------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechh
Confidence 1222 7999999888777643 3 58999999999987654
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=9.2e-12 Score=121.67 Aligned_cols=247 Identities=13% Similarity=0.054 Sum_probs=136.1
Q ss_pred cCCCEEEEeCC--cchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGA--TGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGa--tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+++|+++|||| +|+||++++++|++.|. +|+++.|+... .|..... .....+.+. +.... .....+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~---~Vv~~~r~~~~----~~~~~~~-~~~~~~~~~-~~~~~---~~~~~~ 74 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGA---RVALGTWPPVL----GLFQKSL-QSGRLDEDR-KLPDG---SLIEFA 74 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTC---EEEEEECHHHH----HHHHHHH-HHTTTHHHH-BCTTS---CBCCCS
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCC---EEEEEeccccc----chhhhhh-hhhhhhhhh-hhhcc---cccccc
Confidence 67899999999 89999999999999996 55777775210 0000000 000000010 00000 000012
Q ss_pred EEEecCC--CCCC-CC--CC--------chhhHHHh-------ccCccEEEEcccccC-----c----chhHHHHHHHhH
Q 037479 88 TLVPGDI--TRED-LG--VK--------DSNLREEM-------WNKLDVVINLAATTN-----F----DERYDVALDLNT 138 (492)
Q Consensus 88 ~~v~gDl--~~~~-lg--l~--------~~~~~~~~-------~~~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv 138 (492)
..+.+|+ +++. +. ++ +.+..+.+ +.++|++||+||... + .+.++..+++|+
T Consensus 75 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~ 154 (315)
T 2o2s_A 75 GVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSA 154 (315)
T ss_dssp CEEECCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhh
Confidence 3333433 2211 00 00 01112222 237999999999542 1 145778899999
Q ss_pred HHHHHHHHHHHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHH
Q 037479 139 FGAKHVLNFSKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAIT 217 (492)
Q Consensus 139 ~gt~~ll~~a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (492)
.|+.++++++.... .-.++|++||........
T Consensus 155 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------------------------------------------- 187 (315)
T 2o2s_A 155 YSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP----------------------------------------------- 187 (315)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCT-----------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecccccccCC-----------------------------------------------
Confidence 99999999987642 125899999865432110
Q ss_pred HHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----c-CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhcc
Q 037479 218 LAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----K-ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYG 291 (492)
Q Consensus 218 ~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~-~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~ 291 (492)
++...|+.||+..+.+.+.+ . .++++..|+|+.|-.+.......--.. .....+...+.
T Consensus 188 --------------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~ 252 (315)
T 2o2s_A 188 --------------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEK-SFIDYAIDYSY 252 (315)
T ss_dssp --------------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSS-CHHHHHHHHHH
T ss_pred --------------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccc-hhHHHHHHHHh
Confidence 12247999999888877643 2 689999999999876432110000000 00001100000
Q ss_pred CceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 292 KGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 292 ~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.. .+ ..-+...+|+|++++.++....... . |.++.+.++
T Consensus 253 ~~----~p-----~~r~~~pedvA~~v~~L~s~~~~~i-t-G~~i~vdGG 291 (315)
T 2o2s_A 253 NN----AP-----LRRDLHSDDVGGAALFLLSPLARAV-S-GVTLYVDNG 291 (315)
T ss_dssp HH----SS-----SCCCCCHHHHHHHHHHHTSGGGTTC-C-SCEEEESTT
T ss_pred cc----CC-----CCCCCCHHHHHHHHHHHhCchhccC-c-CCEEEECCC
Confidence 00 00 1124678999999998886433222 2 788888887
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.3e-11 Score=130.60 Aligned_cols=167 Identities=19% Similarity=0.219 Sum_probs=122.7
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHH-hhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 9 FLENKTILVTGATGFLAKIFVEKIL-RVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll-~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
|-.++++|||||+|.||..+++.|. +.|. ++|+++.|+.......+.+.+++ +. ...++
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga--~~vvl~~R~~~~~~~~~~~~~~l---------~~---------~G~~v 586 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGV--RNLVLVSRRGPAASGAAELVAQL---------TA---------YGAEV 586 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSC--CEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEE
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCC--cEEEEeccCccchHHHHHHHHHH---------Hh---------cCCcE
Confidence 3457999999999999999999999 7785 45788899754433333322122 11 13678
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc------CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcccc
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN------KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCAKL 154 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~~ 154 (492)
.++.+|++ +.+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++.+++.. .+
T Consensus 587 ~~~~~Dvs-------d~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~--~l 657 (795)
T 3slk_A 587 SLQACDVA-------DRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP--DV 657 (795)
T ss_dssp EEEECCTT-------CHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT--TS
T ss_pred EEEEeecC-------CHHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh--CC
Confidence 99999999 5555555553 48999999997642 256788999999999999998843 45
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
+||.+||....-.. ...
T Consensus 658 -~iV~~SS~ag~~g~--------------------------------------------------------------~g~ 674 (795)
T 3slk_A 658 -ALVLFSSVSGVLGS--------------------------------------------------------------GGQ 674 (795)
T ss_dssp -EEEEEEETHHHHTC--------------------------------------------------------------SSC
T ss_pred -EEEEEccHHhcCCC--------------------------------------------------------------CCC
Confidence 89999996533111 123
Q ss_pred chHHHHHHHHHHHHHHh-cCCCcEEEEeCCceec
Q 037479 235 NTYVFTKVMGEMFIEHL-KENMSVAIVRPTIITG 267 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-~~~~~~~ivRPs~v~g 267 (492)
..|+.+|...+.+..+. ..|++++.|-|+.|-.
T Consensus 675 ~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t 708 (795)
T 3slk_A 675 GNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAE 708 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECc
Confidence 57999999999888776 5689999999987653
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.12 E-value=6.5e-10 Score=117.70 Aligned_cols=207 Identities=15% Similarity=0.182 Sum_probs=131.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++|+++||||++-||+.+++.|.+.|. +|++..|.. . +.+.+++ ++. ..++..
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga---~Vv~~~~~~-~----~~~~~~i---------~~~---------g~~~~~ 373 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGA---KVVVNDFKD-A----TKTVDEI---------KAA---------GGEAWP 373 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEECSSC-C----HHHHHHH---------HHT---------TCEEEE
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCC---EEEEEeCcc-H----HHHHHHH---------Hhc---------CCeEEE
Confidence 5789999999999999999999999996 446655521 1 1111111 110 145677
Q ss_pred EecCC-CCCCCCCCchhhHHHh---ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---cce
Q 037479 90 VPGDI-TREDLGVKDSNLREEM---WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---KLI 155 (492)
Q Consensus 90 v~gDl-~~~~lgl~~~~~~~~~---~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~ 155 (492)
+.+|+ ++ .....+.+ +.++|++||+||.... .+.++..+++|+.|+.++.+++.... +-.
T Consensus 374 ~~~Dv~~~------~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G 447 (604)
T 2et6_A 374 DQHDVAKD------SEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG 447 (604)
T ss_dssp ECCCHHHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred EEcChHHH------HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 88888 42 11222222 3579999999997532 15688899999999999988875421 235
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
++|.+||....-.. ....
T Consensus 448 ~IVnisS~ag~~~~--------------------------------------------------------------~~~~ 465 (604)
T 2et6_A 448 RIINITSTSGIYGN--------------------------------------------------------------FGQA 465 (604)
T ss_dssp EEEEECCHHHHSCC--------------------------------------------------------------TTBH
T ss_pred EEEEECChhhccCC--------------------------------------------------------------CCCh
Confidence 89999985432110 1134
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
.|+.||+....+.+.. ..|+.+..|.|+. - .+.. .. .. . ....+...
T Consensus 466 ~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~----T~m~---~~------~~-----------~---~~~~~~~~ 517 (604)
T 2et6_A 466 NYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-E----TAMT---LS------IM-----------R---EQDKNLYH 517 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-C----CCC--------------------------------CCSSC
T ss_pred hHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-C----Cccc---cc------cC-----------c---hhhccCCC
Confidence 7999999888776644 4589999999973 1 1111 00 00 0 00012346
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+++|++++.++..... . . ++++.+.++
T Consensus 518 pe~vA~~v~~L~s~~~~-i-t-G~~~~vdGG 545 (604)
T 2et6_A 518 ADQVAPLLVYLGTDDVP-V-T-GETFEIGGG 545 (604)
T ss_dssp GGGTHHHHHHTTSTTCC-C-C-SCEEEEETT
T ss_pred HHHHHHHHHHHhCCccC-C-C-CcEEEECCC
Confidence 88999998887754332 2 2 788887765
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=5.9e-10 Score=127.90 Aligned_cols=167 Identities=16% Similarity=0.119 Sum_probs=112.5
Q ss_pred cCCCEEEEeCCcch-hhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGF-LAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGf-lG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
++||++|||||+|. ||.++++.|++.|. +|+++.|.... ..+... ..+..+.+. ...++.
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA---~VVl~~~R~~~--~l~~~a---------~eL~~el~~-----~G~~v~ 710 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGA---KVIVTTSRFSR--QVTEYY---------QGIYARCGA-----RGSQLV 710 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTC---EEEEEESSCCH--HHHHHH---------HHHHHHHCC-----TTCEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCChH--HHHHHH---------HHHHHHhhc-----cCCeEE
Confidence 67899999999999 99999999999996 45666443221 111111 111111110 025688
Q ss_pred EEecCCCCCCCCCCchhhHHHhc----------c-CccEEEEcccccCc----------chhHHHHHHHhHHHHHHHHHH
Q 037479 89 LVPGDITREDLGVKDSNLREEMW----------N-KLDVVINLAATTNF----------DERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~----------~-~vd~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ll~~ 147 (492)
++.+|++ +.+.++.++ . .+|+|||+||.... .+.++..+++|+.|+.+++++
T Consensus 711 ~v~~DVs-------d~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a 783 (1878)
T 2uv9_A 711 VVPFNQG-------SKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKT 783 (1878)
T ss_dssp EEECCTT-------CHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEEcCCC-------CHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 444444433 2 58999999997532 145678899999999999877
Q ss_pred HHhccc-----ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhh
Q 037479 148 SKKCAK-----LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKD 222 (492)
Q Consensus 148 a~~~~~-----~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (492)
++..+. ..+||++||.....
T Consensus 784 ~~~lp~M~~~~~G~IVnISS~ag~~------------------------------------------------------- 808 (1878)
T 2uv9_A 784 QKKERGYETRPAQVILPLSPNHGTF------------------------------------------------------- 808 (1878)
T ss_dssp HHHHHTCCSCCEEECCEECSCSSSS-------------------------------------------------------
T ss_pred HHHhHHHHhCCCCEEEEEcchhhcc-------------------------------------------------------
Confidence 433212 25899999853221
Q ss_pred hhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCcee
Q 037479 223 LGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIIT 266 (492)
Q Consensus 223 ~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~ 266 (492)
+....|+.||+..+.+.... ..+++++.|.|+.|-
T Consensus 809 ---------gg~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 809 ---------GNDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp ---------SCCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 11347999999998886532 334999999999876
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.2e-10 Score=127.63 Aligned_cols=166 Identities=18% Similarity=0.150 Sum_probs=111.7
Q ss_pred cCCCEEEEeCCcch-hhHHHHHHHHhhCCCCCeEEEE-EecCCCcC-HHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 10 LENKTILVTGATGF-LAKIFVEKILRVQPNVKKLYLL-LRAADAKS-ATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 10 ~~~~~vlITGatGf-lG~~l~~~Ll~~g~~V~~i~~l-vR~~~~~~-~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
+++|++|||||+|. ||.++++.|++.|. +|+++ .|+..... ..+. + .++.+. ...+
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA---~VVL~~~R~~e~lee~a~e----L---------~ael~a-----~Ga~ 532 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGA---KVVVTTSRFSKQVTDYYQS----I---------YAKYGA-----KGST 532 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTC---EEEEEESSCSTTTTTHHHH----T---------TTTTCC-----TTCE
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcC---EEEEEeCCCHHHHHHHHHH----H---------HHHhhc-----CCCe
Confidence 57899999999998 99999999999996 45666 35433221 1111 1 111100 0246
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhc------------c-CccEEEEcccccCc----------chhHHHHHHHhHHHHHH
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMW------------N-KLDVVINLAATTNF----------DERYDVALDLNTFGAKH 143 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~------------~-~vd~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~ 143 (492)
+.++.+|++++ +..+.++ . .+|++||+||.... .+.++..+++|+.|+.+
T Consensus 533 V~vV~~DVTD~-------esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~ 605 (1688)
T 2pff_A 533 LIVVPFNQGSK-------QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMG 605 (1688)
T ss_dssp EEEEECCSSST-------THHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHH
T ss_pred EEEEEeCCCCH-------HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHH
Confidence 88999999954 3333332 2 58999999996522 23467889999999999
Q ss_pred HHHHHHhccc-----ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHH
Q 037479 144 VLNFSKKCAK-----LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITL 218 (492)
Q Consensus 144 ll~~a~~~~~-----~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (492)
++++++..+. -.+||++||.....
T Consensus 606 Ltqaa~~lp~M~krggGrIVnISSiAG~~--------------------------------------------------- 634 (1688)
T 2pff_A 606 CVKKQKSARGIETRPAQVILPMSPNHGTF--------------------------------------------------- 634 (1688)
T ss_dssp HHHHHHHHHTCTTSCEEECCCCCSCTTTS---------------------------------------------------
T ss_pred HHHHHHhChHHHhCCCCEEEEEEChHhcc---------------------------------------------------
Confidence 9998843222 14799999853221
Q ss_pred HHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceec
Q 037479 219 AMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITG 267 (492)
Q Consensus 219 ~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g 267 (492)
+....|+.||+..+.+..+. ...++++.|.|+.|-+
T Consensus 635 -------------Gg~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 635 -------------GGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp -------------SCBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 01247999999999984332 2338888889988874
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=8e-10 Score=127.08 Aligned_cols=167 Identities=17% Similarity=0.136 Sum_probs=113.6
Q ss_pred cCCCEEEEeCCcch-hhHHHHHHHHhhCCCCCeEEEEE-ecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGATGF-LAKIFVEKILRVQPNVKKLYLLL-RAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGatGf-lG~~l~~~Ll~~g~~V~~i~~lv-R~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
++||++|||||+|. ||.++++.|++.|. +|+++. |+... .+.+. ..+.++.+. ...++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA---~Vvl~~~R~~~~---l~~~~---------~eL~~~~~~-----~g~~v 732 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGA---KVVVTTSRFSKQ---VTDYY---------QSIYAKYGA-----KGSTL 732 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTC---EEEEEESSCCHH---HHHHH---------HHHHHHHCC-----TTCEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCCHHH---HHHHH---------HHHHHHhhc-----CCCeE
Confidence 67899999999999 99999999999996 456663 43221 11111 112122110 02468
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc------------c-CccEEEEcccccCc----------chhHHHHHHHhHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW------------N-KLDVVINLAATTNF----------DERYDVALDLNTFGAKHV 144 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~------------~-~vd~Vih~Aa~~~~----------~~~~~~~~~~Nv~gt~~l 144 (492)
.++.+|+++ .+..+.++ . .+|++||+||.... .+.++..+++|+.|+..+
T Consensus 733 ~~v~~DVsd-------~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l 805 (1887)
T 2uv8_A 733 IVVPFNQGS-------KQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGC 805 (1887)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHH
T ss_pred EEEEecCCC-------HHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHH
Confidence 899999994 44343333 2 59999999997532 134678899999999999
Q ss_pred HHHHHhccc-----ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHH
Q 037479 145 LNFSKKCAK-----LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLA 219 (492)
Q Consensus 145 l~~a~~~~~-----~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (492)
+++++..+. -.+||++||......
T Consensus 806 ~~a~~~lp~m~~~~~G~IVnISS~ag~~g--------------------------------------------------- 834 (1887)
T 2uv8_A 806 VKKQKSARGIETRPAQVILPMSPNHGTFG--------------------------------------------------- 834 (1887)
T ss_dssp HHHHHHTTTCCSCCEEEEEEECSCTTCSS---------------------------------------------------
T ss_pred HHHHHhhhhhhhCCCCEEEEEcChHhccC---------------------------------------------------
Confidence 998854322 258999998532211
Q ss_pred HhhhhccccccCCCCchHHHHHHHHHHH-HHHh----cCCCcEEEEeCCceec
Q 037479 220 MKDLGIKRAKIYGWPNTYVFTKVMGEMF-IEHL----KENMSVAIVRPTIITG 267 (492)
Q Consensus 220 ~~~~~~~~~~~~~~~n~Y~~sK~~aE~~-v~~~----~~~~~~~ivRPs~v~g 267 (492)
....|+.||+..+.+ .... ...++++.+.|+.|-+
T Consensus 835 -------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 835 -------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp -------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 124799999999888 3322 2339999999999874
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-08 Score=100.70 Aligned_cols=180 Identities=8% Similarity=-0.037 Sum_probs=113.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHh-hCCCCCeEEEEEecCCCcCHHH-HHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILR-VQPNVKKLYLLLRAADAKSATV-RFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~-~g~~V~~i~~lvR~~~~~~~~~-r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+|++|||||++-||.++++.|++ .|. +|.++.|+........ .. .+.....+....++. ..++.
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA---~Vv~~~~~~~~~~~~~~~~--gwyn~~~~~~~~~~~--------G~~a~ 112 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGA---DTLGVFFERPGEEGKPGTS--GWYNSAAFHKFAAQK--------GLYAK 112 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCBTTBCCCH--HHHHHHHHHHHHHHT--------TCCEE
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCC---EEEEEeCCchhhhhhcccc--cchhHHHHHHHHHhc--------CCceE
Confidence 479999999999999999999999 995 5577777654422100 00 000000011000111 24678
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEccccc----------------Cc-------------------
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATT----------------NF------------------- 126 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~----------------~~------------------- 126 (492)
.+.+|+++ ++..+.++ .++|++||+||.. .+
T Consensus 113 ~i~~Dvtd-------~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~ 185 (405)
T 3zu3_A 113 SINGDAFS-------DEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKES 185 (405)
T ss_dssp EEESCTTS-------HHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEE
T ss_pred EEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccc
Confidence 89999994 44333333 4799999999863 01
Q ss_pred ------chhHHHHHHHhHHHHH-HHHHHHHhc--c-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHH
Q 037479 127 ------DERYDVALDLNTFGAK-HVLNFSKKC--A-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVER 196 (492)
Q Consensus 127 ------~~~~~~~~~~Nv~gt~-~ll~~a~~~--~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~ 196 (492)
.+.++..+++|..++. .+++.+... . +-.++|.+||...... .|
T Consensus 186 ~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~---------~p----------------- 239 (405)
T 3zu3_A 186 VLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT---------HD----------------- 239 (405)
T ss_dssp EECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG---------TT-----------------
T ss_pred cCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc---------CC-----------------
Confidence 1457788888988876 555554321 1 1137899988543211 00
Q ss_pred HHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cC-CCcEEEEeCCceecCCC
Q 037479 197 QVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KE-NMSVAIVRPTIITGTYK 270 (492)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~-~~~~~ivRPs~v~g~~~ 270 (492)
..+...|+.||+..+.+.+.. .. |+++..+-|+.|-.+..
T Consensus 240 ----------------------------------~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s 285 (405)
T 3zu3_A 240 ----------------------------------IYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQAS 285 (405)
T ss_dssp ----------------------------------TTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHH
T ss_pred ----------------------------------CccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchh
Confidence 012368999999988887654 46 89999999998876543
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.01 E-value=7.7e-09 Score=103.05 Aligned_cols=181 Identities=10% Similarity=-0.025 Sum_probs=112.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHh-hCCCCCeEEEEEecCCCcCHHH-HHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILR-VQPNVKKLYLLLRAADAKSATV-RFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~-~g~~V~~i~~lvR~~~~~~~~~-r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+|++|||||++-||.++++.|.+ .|. +|++..|+........ .. .+.....+....++. ..++.
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA---~Vv~~~r~~~~~~~~~~~a--g~~n~~a~~~~~~~~--------G~~a~ 126 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGA---DTLGVFFEKPGTASKAGTA--GWYNSAAFDKHAKAA--------GLYSK 126 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCCSSSCCCH--HHHHHHHHHHHHHHT--------TCCEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCC---EEEEEeCCchhhhhhhccc--ccchhHHHHHHHHhc--------CCcEE
Confidence 478999999999999999999999 995 5577778755432100 00 000000010000111 24678
Q ss_pred EEecCCCCCCCCCCchhhHHH-------hc-cCccEEEEccccc----------------Cc------------------
Q 037479 89 LVPGDITREDLGVKDSNLREE-------MW-NKLDVVINLAATT----------------NF------------------ 126 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~-------~~-~~vd~Vih~Aa~~----------------~~------------------ 126 (492)
.+.+|+++ ++..+. .+ .++|++||+||.. .+
T Consensus 127 ~i~~Dvtd-------~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~ 199 (422)
T 3s8m_A 127 SINGDAFS-------DAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQ 199 (422)
T ss_dssp EEESCTTS-------HHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEE
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccc
Confidence 89999995 333322 23 5799999999861 01
Q ss_pred -------chhHHHHHHHhHHHHH-HHHHHHHhcc---cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHH
Q 037479 127 -------DERYDVALDLNTFGAK-HVLNFSKKCA---KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVE 195 (492)
Q Consensus 127 -------~~~~~~~~~~Nv~gt~-~ll~~a~~~~---~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~ 195 (492)
.+.++..+++|..++. .+++.+.... +-.++|.+||....... |
T Consensus 200 ~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~---------p---------------- 254 (422)
T 3s8m_A 200 ASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW---------P---------------- 254 (422)
T ss_dssp EEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH---------H----------------
T ss_pred cccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC---------C----------------
Confidence 1346667777777764 5566554321 11378999985422110 0
Q ss_pred HHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCC
Q 037479 196 RQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~ 270 (492)
..+...|+.||+..+.+.+.. ..|+++..+.|+.|-.+..
T Consensus 255 -----------------------------------~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~ 299 (422)
T 3s8m_A 255 -----------------------------------IYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS 299 (422)
T ss_dssp -----------------------------------HHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred -----------------------------------CccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence 012358999999988877654 4689999999999876654
Q ss_pred C
Q 037479 271 E 271 (492)
Q Consensus 271 ~ 271 (492)
.
T Consensus 300 ~ 300 (422)
T 3s8m_A 300 A 300 (422)
T ss_dssp G
T ss_pred h
Confidence 3
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2e-08 Score=100.76 Aligned_cols=173 Identities=10% Similarity=-0.053 Sum_probs=112.2
Q ss_pred cCCCEEEEeCCcchhhHH--HHHHHHhhCCCCCeEEEEEecCCCcCH---------HHHHHHHhhcChhhHHHHHhcCCc
Q 037479 10 LENKTILVTGATGFLAKI--FVEKILRVQPNVKKLYLLLRAADAKSA---------TVRFHNEIIGKDLFRVLKEKNGTH 78 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~--l~~~Ll~~g~~V~~i~~lvR~~~~~~~---------~~r~~~~~~~~~~f~~l~~~~~~~ 78 (492)
..+|++|||||++-||.. ++..|.+.|. +|+++.|+...... .+.+. .+.++.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga---~Vi~~~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~~--- 121 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEA---HTIGVSYETGATDRRIGTAGWYNNIFFK----------EFAKKK--- 121 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCC---EEEEEECCCCCCSSCCCCHHHHHHHHHH----------HHHHHT---
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCC---EEEEEecCcchhhhcccccccchHHHHH----------HHHHHc---
Confidence 568999999999999999 9999998885 56888886544220 12221 111111
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEccccc----------------C----------
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATT----------------N---------- 125 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~----------------~---------- 125 (492)
..++..+.+|+++ .+..+.++ .++|++||+||.. .
T Consensus 122 -----g~~~~~~~~Dvtd-------~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~ 189 (418)
T 4eue_A 122 -----GLVAKNFIEDAFS-------NETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTI 189 (418)
T ss_dssp -----TCCEEEEESCTTC-------HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEE
T ss_pred -----CCcEEEEEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccc
Confidence 2568899999994 33333332 3699999999863 0
Q ss_pred ---------------cchhHHHHHHHhHHHHH-HHHHHHHhcc---cceeEEEeeeceeecccccceeccccCCCCCCCC
Q 037479 126 ---------------FDERYDVALDLNTFGAK-HVLNFSKKCA---KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNG 186 (492)
Q Consensus 126 ---------------~~~~~~~~~~~Nv~gt~-~ll~~a~~~~---~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~ 186 (492)
..+.++..+++|..+.. .+++.+.... +-.++|.+||..... .+|
T Consensus 190 d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~---------~~p------- 253 (418)
T 4eue_A 190 DVERDEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPR---------TYK------- 253 (418)
T ss_dssp ETTTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG---------GTT-------
T ss_pred cccccccccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcC---------CCC-------
Confidence 11345666777776665 5555544321 113688888753221 111
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----c-CCCcEEEE
Q 037479 187 ASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----K-ENMSVAIV 260 (492)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~-~~~~~~iv 260 (492)
..+...|+.||+..+.+.+.. . .|+++.++
T Consensus 254 --------------------------------------------~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V 289 (418)
T 4eue_A 254 --------------------------------------------IYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVS 289 (418)
T ss_dssp --------------------------------------------TTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred --------------------------------------------ccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEE
Confidence 012378999999988877654 4 58999999
Q ss_pred eCCceecCCC
Q 037479 261 RPTIITGTYK 270 (492)
Q Consensus 261 RPs~v~g~~~ 270 (492)
-|+.|-.+..
T Consensus 290 ~PG~v~T~~s 299 (418)
T 4eue_A 290 VNKALVTKAS 299 (418)
T ss_dssp ECCCCCCHHH
T ss_pred ECCcCcChhh
Confidence 9998876544
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.2e-08 Score=108.06 Aligned_cols=165 Identities=20% Similarity=0.185 Sum_probs=106.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC------CcCHHHHHHHHhhcChhhHHHHHhcCCchhhhc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD------AKSATVRFHNEIIGKDLFRVLKEKNGTHLNALI 83 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~------~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (492)
+++|+++||||++-||+.+++.|++.|. +|++..|... .....+.+.+++ +..
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga---~Vv~~~~~~~~~~~gr~~~~~~~~~~~i---------~~~--------- 64 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGA---KVVVNDLGGALNGQGGNSKAADVVVDEI---------VKN--------- 64 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECC-----------CHHHHHHHHH---------HHT---------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC---EEEEEeCCccccccccchHHHHHHHHHH---------Hhc---------
Confidence 6789999999999999999999999996 4577666431 112222222111 111
Q ss_pred cCceEEEecCCCCCCCCCCchhhHHHh---ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 84 SEKITLVPGDITREDLGVKDSNLREEM---WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 84 ~~~v~~v~gDl~~~~lgl~~~~~~~~~---~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
..++. .|+++..- .....+.+ +.++|++||+||.... .+.++..+++|+.|+..+.+++....
T Consensus 65 g~~~~---~d~~d~~~---~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~ 138 (604)
T 2et6_A 65 GGVAV---ADYNNVLD---GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQ 138 (604)
T ss_dssp TCEEE---EECCCTTC---HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEE---EEcCCHHH---HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 11222 45554321 11222222 3579999999997532 25678899999999999988775421
Q ss_pred --cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 153 --KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 153 --~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
+-.++|.+||....-..
T Consensus 139 ~~~~G~IVnisS~ag~~~~------------------------------------------------------------- 157 (604)
T 2et6_A 139 KQKYGRIVNTSSPAGLYGN------------------------------------------------------------- 157 (604)
T ss_dssp HHTCEEEEEECCHHHHHCC-------------------------------------------------------------
T ss_pred HcCCCEEEEECCHHHcCCC-------------------------------------------------------------
Confidence 23589999985432110
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCC
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPT 263 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs 263 (492)
.....|+.||+..+.+.+.. ..|+.+..|.|+
T Consensus 158 -~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 158 -FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 11347999999888777654 458999999996
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=1.6e-08 Score=122.31 Aligned_cols=170 Identities=15% Similarity=0.108 Sum_probs=115.4
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
|-.+|+++||||+|-||..+++.|++.|. +.|+++.|+.......+...++ ++.. ..++.
T Consensus 1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~---------l~~~---------g~~v~ 1940 (2512)
T 2vz8_A 1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGA--QKLVLTSRSGIRTGYQARQVRE---------WRRQ---------GVQVL 1940 (2512)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCSHHHHHHHHH---------HHHT---------TCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHCCC--CEEEEEeCCCcchHHHHHHHHH---------HHhC---------CCEEE
Confidence 44789999999999999999999999996 3467788876543222221111 1111 25688
Q ss_pred EEecCCCCCCCCCCchhhHHHhc------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-ccc
Q 037479 89 LVPGDITREDLGVKDSNLREEMW------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-AKL 154 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~ 154 (492)
++.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++.+++... ...
T Consensus 1941 ~~~~Dvsd-------~~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~ 2013 (2512)
T 2vz8_A 1941 VSTSNASS-------LDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL 2013 (2512)
T ss_dssp EECCCSSS-------HHHHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC
T ss_pred EEecCCCC-------HHHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 89999994 44333333 369999999997532 1456778899999999998887653 345
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.+||.+||....... ...
T Consensus 2014 g~iV~iSS~ag~~g~--------------------------------------------------------------~g~ 2031 (2512)
T 2vz8_A 2014 DYFVIFSSVSCGRGN--------------------------------------------------------------AGQ 2031 (2512)
T ss_dssp CEEEEECCHHHHTTC--------------------------------------------------------------TTC
T ss_pred CEEEEecchhhcCCC--------------------------------------------------------------CCc
Confidence 789999995433111 123
Q ss_pred chHHHHHHHHHHHHHHh-cCCCcEEEEeCCceec
Q 037479 235 NTYVFTKVMGEMFIEHL-KENMSVAIVRPTIITG 267 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-~~~~~~~ivRPs~v~g 267 (492)
..|+.+|+..+.+.+.. ..|+|...+..+.+.+
T Consensus 2032 ~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2032 ANYGFANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence 57999999999998854 4688888888776544
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.66 E-value=3.1e-08 Score=81.16 Aligned_cols=98 Identities=12% Similarity=0.029 Sum_probs=69.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+++|+|+|+ |++|+.+++.|++.|. .+|+++.|+.. ++. .+ ...++..+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~--~~v~~~~r~~~------~~~-~~--------------------~~~~~~~~ 53 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSN--YSVTVADHDLA------ALA-VL--------------------NRMGVATK 53 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSS--EEEEEEESCHH------HHH-HH--------------------HTTTCEEE
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCHH------HHH-HH--------------------HhCCCcEE
Confidence 3579999999 9999999999999882 35688888532 211 00 01466788
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEee
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVS 161 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vS 161 (492)
.+|++ +.+....+++++|+|||+++.. .+..+++.|.+. +++.|...+
T Consensus 54 ~~d~~-------~~~~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~~~~-g~~~~~~~~ 101 (118)
T 3ic5_A 54 QVDAK-------DEAGLAKALGGFDAVISAAPFF---------------LTPIIAKAAKAA-GAHYFDLTE 101 (118)
T ss_dssp ECCTT-------CHHHHHHHTTTCSEEEECSCGG---------------GHHHHHHHHHHT-TCEEECCCS
T ss_pred EecCC-------CHHHHHHHHcCCCEEEECCCch---------------hhHHHHHHHHHh-CCCEEEecC
Confidence 99998 5555667788999999999632 135678888887 666554433
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=8.6e-08 Score=93.07 Aligned_cols=121 Identities=12% Similarity=0.005 Sum_probs=76.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+||||+||+|++++..|+..+. +..+.++.++... +++...... +.... .+....+.+..+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~----~~~~~~~~d------l~~~~-----~~~~~~~~i~~~ 64 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSI----NKLEGLRED------IYDAL-----AGTRSDANIYVE 64 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGH----HHHHHHHHH------HHHHH-----TTSCCCCEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCch----hhhHHHHHH------HHHhH-----HhcCCCeEEEeC
Confidence 5899999999999999999998764 3456666652221 111100000 00000 000012222221
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
+ +.+.++++++|+|||+||..+- .......+..|+.+++++++.+++. + +++|+++|
T Consensus 65 ~-----------d~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~S 122 (313)
T 1hye_A 65 S-----------DENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVIT 122 (313)
T ss_dssp E-----------TTCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECS
T ss_pred C-----------cchHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEec
Confidence 1 1123667899999999997643 2344667999999999999999998 5 88888887
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.62 E-value=3e-08 Score=97.04 Aligned_cols=124 Identities=15% Similarity=0.048 Sum_probs=76.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCC----CCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQP----NVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~----~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.++|+||||+||+|++++..|+..+. .+..|.++.+.... ..+++..... .|. +..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~--~~~~~~g~~~------dl~------------~~~ 64 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEK--AQKALQGVMM------EID------------DCA 64 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHH--HHHHHHHHHH------HHH------------TTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCcc--ccccchhhHH------HHh------------hhc
Confidence 57999999999999999999998763 12256666554100 0111110000 000 000
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccce-eEEEeee
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLI-VLVHVST 162 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~V~vST 162 (492)
..+.+|+. ..+.....++++|+|||+||..+- .....+.+..|+.+++++++.+++..+.+ +||++|.
T Consensus 65 ~~~~~~i~-------~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 65 FPLLAGMT-------AHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp CTTEEEEE-------EESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred ccccCcEE-------EecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 00112333 112234677999999999997653 23456788999999999999999873244 7888875
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.62 E-value=5.2e-08 Score=95.08 Aligned_cols=118 Identities=15% Similarity=0.059 Sum_probs=77.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+.++|+||||+||+|..++..|+..|. +..|.++.+.+. ..... ++.... ...++..+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~----~~~~~-dL~~~~----------------~~~~v~~~ 64 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA----PGVTA-DISHMD----------------TGAVVRGF 64 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH----HHHHH-HHHTSC----------------SSCEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc----HhHHH-Hhhccc----------------ccceEEEE
Confidence 357999999999999999999988763 345677665442 11100 110000 00122221
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
. ..+....+++++|+|||+|+...- ..........|+.+++++++.+++. +.+++|+++|
T Consensus 65 ~-----------~t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~S 125 (326)
T 1smk_A 65 L-----------GQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLIS 125 (326)
T ss_dssp E-----------SHHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred e-----------CCCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEEC
Confidence 1 112234677999999999997543 2334566899999999999999997 6778888887
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.58 E-value=2.6e-07 Score=89.22 Aligned_cols=118 Identities=11% Similarity=-0.032 Sum_probs=76.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+||||+||+|..++..|+..+. +..+.++.++.. .++++... .+ +..... ...++.+..+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~----~~~~~~~~--~d----l~~~~~------~~~~~~v~~~ 63 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDK----EDDTVGQA--AD----TNHGIA------YDSNTRVRQG 63 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGG----HHHHHHHH--HH----HHHHHT------TTCCCEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCC----hhhHHHHH--HH----HHHHHh------hCCCcEEEeC
Confidence 5899999999999999999988764 345666666211 12221100 01 111000 0122333322
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
| .+.++++|+|||+|+..+-. ......+..|+.+++++++.+++. +.+++|+++|
T Consensus 64 ~--------------~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~S 119 (303)
T 1o6z_A 64 G--------------YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTS 119 (303)
T ss_dssp C--------------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECC
T ss_pred C--------------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeC
Confidence 1 14468999999999976432 344567899999999999999998 7788888886
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=3.7e-06 Score=101.96 Aligned_cols=115 Identities=14% Similarity=0.205 Sum_probs=76.8
Q ss_pred cCCCEEEEeCCcch-hhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGF-LAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGf-lG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
++||+++||||++. ||+.+++.|++.|. +|++..|+..... .+.++ .+.++.+. ...++.
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA---~Vvi~~r~~~~~~-~~~~~----------~l~~~l~~-----~G~~~~ 2194 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGA---TVIATTSRLDDDR-LAFYK----------QLYRDHAR-----FDATLW 2194 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTC---EEEEEESCCSHHH-HHHHH----------HHHHHHCC-----TTCEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCC---EEEEEeCChhhhh-hHHHH----------HHHHHHhh-----cCCeEE
Confidence 78999999999999 99999999999996 5578777643210 00011 11111110 024678
Q ss_pred EEecCCCCCCCCCCchhhHHHh-----------ccCccEEEEcccc----cCc------------chhHHHHHHHhHHHH
Q 037479 89 LVPGDITREDLGVKDSNLREEM-----------WNKLDVVINLAAT----TNF------------DERYDVALDLNTFGA 141 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~-----------~~~vd~Vih~Aa~----~~~------------~~~~~~~~~~Nv~gt 141 (492)
.+.+|+++ .+..+.+ +.++|++||+||. ..+ +...+..+++|+.++
T Consensus 2195 ~v~~Dvtd-------~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~ 2267 (3089)
T 3zen_D 2195 VVPANMAS-------YSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAV 2267 (3089)
T ss_dssp EEECCTTC-------HHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999994 4433333 2358999999997 211 122345589999999
Q ss_pred HHHHHHHHh
Q 037479 142 KHVLNFSKK 150 (492)
Q Consensus 142 ~~ll~~a~~ 150 (492)
..+++.+..
T Consensus 2268 ~~l~~~~~~ 2276 (3089)
T 3zen_D 2268 QRLISGLSK 2276 (3089)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988887754
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.18 E-value=1.8e-06 Score=87.89 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=71.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++++|+||| +|++|+++++.|++.|. +|++..|+.. +.+ ++. ++ ..++..
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G~---~V~v~~R~~~------~a~-~la---------~~---------~~~~~~ 51 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSGI---KVTVACRTLE------SAK-KLS---------AG---------VQHSTP 51 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTTC---EEEEEESSHH------HHH-HTT---------TT---------CTTEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCcC---EEEEEECCHH------HHH-HHH---------Hh---------cCCceE
Confidence 4578999998 89999999999999884 5688888532 211 110 00 124677
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHH--hH-------HHHHHHHHHHHhcccce
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDL--NT-------FGAKHVLNFSKKCAKLI 155 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~--Nv-------~gt~~ll~~a~~~~~~~ 155 (492)
+.+|++ +.+....+++++|+|||+|+......-...+++. |+ .++.+++++|++. +++
T Consensus 52 ~~~Dv~-------d~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 52 ISLDVN-------DDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp EECCTT-------CHHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred EEeecC-------CHHHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 889998 5544557778999999999863221111222332 32 4678899999987 554
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=1.8e-06 Score=82.69 Aligned_cols=83 Identities=16% Similarity=0.160 Sum_probs=59.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++++++||||+|++|++++..|++.|. +|+++.|+... .+.+.++ +... .++.+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~---~V~i~~R~~~~---~~~l~~~---------~~~~----------~~~~~ 171 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA---EVVLCGRKLDK---AQAAADS---------VNKR----------FKVNV 171 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHH---------HHHH----------HTCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEECCHHH---HHHHHHH---------HHhc----------CCcEE
Confidence 5789999999999999999999999985 46888886321 1111111 1110 13456
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEccccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATT 124 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~ 124 (492)
+.+|++ +.+....+++++|+|||+|+..
T Consensus 172 ~~~D~~-------~~~~~~~~~~~~DvlVn~ag~g 199 (287)
T 1lu9_A 172 TAAETA-------DDASRAEAVKGAHFVFTAGAIG 199 (287)
T ss_dssp EEEECC-------SHHHHHHHTTTCSEEEECCCTT
T ss_pred EEecCC-------CHHHHHHHHHhCCEEEECCCcc
Confidence 778988 5555667788999999999853
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=1.2e-05 Score=67.93 Aligned_cols=100 Identities=16% Similarity=0.152 Sum_probs=63.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++|+|+|+ |.+|+.+++.|.+.|.+| +++.|+.. +.. .+ .......+
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v---~~~d~~~~------~~~-~~--------------------~~~~~~~~ 53 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEV---LAVDINEE------KVN-AY--------------------ASYATHAV 53 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCC---EEEESCHH------HHH-TT--------------------TTTCSEEE
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEE---EEEeCCHH------HHH-HH--------------------HHhCCEEE
Confidence 5678999998 999999999999998765 66666421 111 00 01234567
Q ss_pred ecCCCCCCCCCCchhhHHHh-ccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 91 PGDITREDLGVKDSNLREEM-WNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
.+|.+ +.+.+..+ ++++|+||++++.. .+.|. .+.+.+++. +.+++|..++
T Consensus 54 ~~d~~-------~~~~l~~~~~~~~d~vi~~~~~~---------~~~~~----~~~~~~~~~-~~~~ii~~~~ 105 (144)
T 2hmt_A 54 IANAT-------EENELLSLGIRNFEYVIVAIGAN---------IQAST----LTTLLLKEL-DIPNIWVKAQ 105 (144)
T ss_dssp ECCTT-------CHHHHHTTTGGGCSEEEECCCSC---------HHHHH----HHHHHHHHT-TCSEEEEECC
T ss_pred EeCCC-------CHHHHHhcCCCCCCEEEECCCCc---------hHHHH----HHHHHHHHc-CCCeEEEEeC
Confidence 88887 44444343 57899999998741 12222 255667776 5566665554
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.97 E-value=9e-06 Score=74.28 Aligned_cols=78 Identities=23% Similarity=0.307 Sum_probs=53.2
Q ss_pred CCCEEEEeCC----------------cchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHh
Q 037479 11 ENKTILVTGA----------------TGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEK 74 (492)
Q Consensus 11 ~~~~vlITGa----------------tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~ 74 (492)
+||+|||||| ||.+|.++++.+++.|.+ |.++.|+..-...
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~---V~lv~~~~~~~~~-------------------- 58 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYE---VCLITTKRALKPE-------------------- 58 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCE---EEEEECTTSCCCC--------------------
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCE---EEEEeCCcccccc--------------------
Confidence 5899999999 999999999999999964 5788886532110
Q ss_pred cCCchhhhccCceEEEecCCCCCCCCCCchhhH---HHhccCccEEEEcccccCcc
Q 037479 75 NGTHLNALISEKITLVPGDITREDLGVKDSNLR---EEMWNKLDVVINLAATTNFD 127 (492)
Q Consensus 75 ~~~~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~---~~~~~~vd~Vih~Aa~~~~~ 127 (492)
...++..+..+- ..+.. ...+.++|++||+||...|.
T Consensus 59 --------~~~~~~~~~v~s--------~~em~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 59 --------PHPNLSIREITN--------TKDLLIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp --------CCTTEEEEECCS--------HHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred --------CCCCeEEEEHhH--------HHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence 012445544431 22222 23446899999999987764
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00013 Score=70.62 Aligned_cols=115 Identities=15% Similarity=0.064 Sum_probs=73.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+||+|++|..++..|+..+. +..|.++.+.+ .+....++.... ...++....+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~-----~~~~a~dL~~~~----------------~~~~l~~~~~ 58 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH-----TPGVAADLSHIE----------------TRATVKGYLG 58 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS-----HHHHHHHHTTSS----------------SSCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCc-----cHHHHHHHhccC----------------cCceEEEecC
Confidence 5899999999999999999988763 56788888865 111111111100 0012222211
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccce-eEEEee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLI-VLVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~-~~V~vS 161 (492)
..+ .+.+++++|+||++|+...- .....+.+..|+..++.+++.+++. ... .+|.+|
T Consensus 59 ----------t~d-~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~s 117 (314)
T 1mld_A 59 ----------PEQ-LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIIS 117 (314)
T ss_dssp ----------GGG-HHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred ----------CCC-HHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEEC
Confidence 012 33567999999999997643 2333456899999999999998886 333 455554
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=9.8e-06 Score=78.88 Aligned_cols=119 Identities=22% Similarity=0.068 Sum_probs=72.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCe-----EEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKK-----LYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~-----i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
.++|.||||+|++|++++..|+..+. +.. +.++.+.+... ..+-...++.... ..-
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~~~-~~~g~a~DL~~~~-----------------~~~ 63 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPMMG-VLDGVLMELQDCA-----------------LPL 63 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGGHH-HHHHHHHHHHHTC-----------------CTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCccc-cchhhHhhhHhhh-----------------hcc
Confidence 46899999999999999999987653 233 67776653110 0111000111100 011
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccce--eEEEee
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLI--VLVHVS 161 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~--~~V~vS 161 (492)
+..+.+ . . + ....++++|+|||+||..+- .+...+.++.|+..++++++.+++. +.+ +++.+|
T Consensus 64 ~~~~~~--~-------~-~-~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvs 129 (333)
T 5mdh_A 64 LKDVIA--T-------D-K-EEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVG 129 (333)
T ss_dssp EEEEEE--E-------S-C-HHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECS
T ss_pred cCCEEE--c-------C-C-cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Confidence 111111 1 1 1 12566899999999986542 2344567899999999999999987 444 355555
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.75 E-value=7.3e-05 Score=62.67 Aligned_cols=96 Identities=14% Similarity=0.173 Sum_probs=60.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|+|+|+ |++|+.++..|.+.|+ +|.++.|++. ..+.+. ++ .++..+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~---~v~~~d~~~~---~~~~~~-------------~~----------~~~~~~~ 53 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGH---DIVLIDIDKD---ICKKAS-------------AE----------IDALVIN 53 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCHH---HHHHHH-------------HH----------CSSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHH---HHHHHH-------------Hh----------cCcEEEE
Confidence 589999986 9999999999999885 4577776432 111111 11 2456778
Q ss_pred cCCCCCCCCCCchhhHHHh-ccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 92 GDITREDLGVKDSNLREEM-WNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
+|.+ +.+.+... ++++|+||++.... ..| ..+.+.+++. +..++|.
T Consensus 54 ~d~~-------~~~~l~~~~~~~~d~vi~~~~~~----------~~~----~~~~~~~~~~-~~~~ii~ 100 (140)
T 1lss_A 54 GDCT-------KIKTLEDAGIEDADMYIAVTGKE----------EVN----LMSSLLAKSY-GINKTIA 100 (140)
T ss_dssp SCTT-------SHHHHHHTTTTTCSEEEECCSCH----------HHH----HHHHHHHHHT-TCCCEEE
T ss_pred cCCC-------CHHHHHHcCcccCCEEEEeeCCc----------hHH----HHHHHHHHHc-CCCEEEE
Confidence 8887 33333222 57899999997521 122 2355566766 4556654
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00012 Score=61.71 Aligned_cols=74 Identities=14% Similarity=0.154 Sum_probs=52.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+++|+|+|+ |.+|+.+++.|.+.|++| .++.|++. ..+++. ...+.++
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V---~~id~~~~---~~~~~~------------------------~~~~~~~ 53 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKV---LAVDKSKE---KIELLE------------------------DEGFDAV 53 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCE---EEEESCHH---HHHHHH------------------------HTTCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeE---EEEECCHH---HHHHHH------------------------HCCCcEE
Confidence 4678999997 999999999999999754 67776432 111211 1456789
Q ss_pred ecCCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 91 PGDITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
.||.+ +++.++.+ .+++|+||.+.+
T Consensus 54 ~gd~~-------~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 54 IADPT-------DESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp ECCTT-------CHHHHHHSCCTTCSEEEECCS
T ss_pred ECCCC-------CHHHHHhCCcccCCEEEEecC
Confidence 99999 55544343 468999998776
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=5e-05 Score=69.15 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=31.8
Q ss_pred cCCCEEEEeCC----------------cchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGA----------------TGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGa----------------tGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
++||+|||||| ||.+|..+++.|++.|.+| .++.|+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V---~l~~~~~ 58 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANV---TLVSGPV 58 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEE---EEEECSC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEE---EEEECCc
Confidence 68999999999 7999999999999999744 6666654
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.64 E-value=9.6e-05 Score=75.35 Aligned_cols=110 Identities=16% Similarity=0.178 Sum_probs=66.2
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
|..-+++++|+|+|| |++|+.++..|++.+. .+|++..|+... .+.+. ++ .
T Consensus 17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g--~~V~v~~R~~~k---a~~la-------------~~----------~ 67 (467)
T 2axq_A 17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAANDD--INVTVACRTLAN---AQALA-------------KP----------S 67 (467)
T ss_dssp ------CEEEEEECC-STTHHHHHHHHHTSTT--EEEEEEESSHHH---HHHHH-------------GG----------G
T ss_pred cccCCCCCEEEEECC-hHHHHHHHHHHHhCCC--CeEEEEECCHHH---HHHHH-------------Hh----------c
Confidence 444567889999997 9999999999998732 267888886321 11111 00 2
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHH-------h--HHHHHHHHHHHHhc
Q 037479 86 KITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDL-------N--TFGAKHVLNFSKKC 151 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~-------N--v~gt~~ll~~a~~~ 151 (492)
++..+.+|+. +.+.+..+++++|+||||++......-...+++. + ...+..+++.|++.
T Consensus 68 ~~~~~~~D~~-------d~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~a 135 (467)
T 2axq_A 68 GSKAISLDVT-------DDSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKA 135 (467)
T ss_dssp TCEEEECCTT-------CHHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred CCcEEEEecC-------CHHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHc
Confidence 3566788887 4444557778999999999864211111112221 1 13456777888776
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0014 Score=64.26 Aligned_cols=95 Identities=11% Similarity=0.047 Sum_probs=58.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHH-hhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKIL-RVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll-~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.+|++|||||+.-+|.+....|. +.|- .+.++.|.+.......... ..-....|...-++. ..+...
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~GA---~vi~v~~~~~~~~~~~ata-g~~~~~a~~~~i~~~--------G~~a~~ 116 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYGA---ATIGVSFEKAGSETKYGTP-GWYNNLAFDEAAKRE--------GLYSVT 116 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCCSSSCCCH-HHHHHHHHHHHHHHH--------TCCEEE
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCCC---CEEEEecCCcccccccccc-cchhHHHHHHHHHHc--------CCCcee
Confidence 46999999999999999998887 6674 5577777654322100000 000011122222221 356788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEccccc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATT 124 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~ 124 (492)
+.+|+++ ++..+.++ .++|+++|++|..
T Consensus 117 i~~Dv~d-------~e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 117 IDGDAFS-------DEIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp EESCTTS-------HHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred EeCCCCC-------HHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 9999994 44343433 4799999999964
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.55 E-value=4.4e-05 Score=74.39 Aligned_cols=115 Identities=15% Similarity=0.097 Sum_probs=70.9
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+|+++++|.|+||+|++|+.++..|+..|. ...|.++.+.+.. .+....++.... | + ..++
T Consensus 4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~~~k---~~g~a~DL~~~~-~-------~-------~~~i 64 (343)
T 3fi9_A 4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPFAVG---LEGVAEEIRHCG-F-------E-------GLNL 64 (343)
T ss_dssp CCSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSCHHH---HHHHHHHHHHHC-C-------T-------TCCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCCchh---HHHHHHhhhhCc-C-------C-------CCce
Confidence 789999999999999999999999988874 2356776653211 111110111000 0 0 0111
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhccccee
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIV 156 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~ 156 (492)
.+ . .+ ....++++|+||.+||..+- .+.-.+.++.|+...+.+.+.+.+. ..+.
T Consensus 65 ~~-t------------~d-~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~-~p~a 119 (343)
T 3fi9_A 65 TF-T------------SD-IKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY-CPDC 119 (343)
T ss_dssp EE-E------------SC-HHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH-CTTC
T ss_pred EE-c------------CC-HHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-ccCc
Confidence 11 1 12 23566899999999997532 2345677899999999999999886 3444
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00012 Score=73.42 Aligned_cols=82 Identities=20% Similarity=0.230 Sum_probs=56.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCC-CeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNV-KKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V-~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
++|+|+|| |++|+.+++.|++.|. + ..|.+..|+... .+.+.++ +... ...++..+.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~-~~~~V~v~~r~~~~---~~~la~~---------l~~~--------~~~~~~~~~ 59 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNRE-VFSHITLASRTLSK---CQEIAQS---------IKAK--------GYGEIDITT 59 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTT-TCCEEEEEESCHHH---HHHHHHH---------HHHT--------TCCCCEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEEECCHHH---HHHHHHH---------hhhh--------cCCceEEEE
Confidence 58999999 9999999999998763 3 467888886422 1222111 1100 013578899
Q ss_pred cCCCCCCCCCCchhhHHHhccC--ccEEEEcccc
Q 037479 92 GDITREDLGVKDSNLREEMWNK--LDVVINLAAT 123 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~--vd~Vih~Aa~ 123 (492)
+|++ +.+.+++++++ +|+|||+|+.
T Consensus 60 ~D~~-------d~~~l~~~l~~~~~DvVin~ag~ 86 (405)
T 4ina_A 60 VDAD-------SIEELVALINEVKPQIVLNIALP 86 (405)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECSCG
T ss_pred ecCC-------CHHHHHHHHHhhCCCEEEECCCc
Confidence 9998 55556677776 9999999985
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0002 Score=61.30 Aligned_cols=79 Identities=15% Similarity=0.331 Sum_probs=54.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|.+++|+|+|+ |.+|+.+++.|.+.|++| .++.|... ...+++. .. ...++.+
T Consensus 1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V---~vid~~~~--~~~~~~~-------------~~--------~~~~~~~ 53 (153)
T 1id1_A 1 HRKDHFIVCGH-SILAINTILQLNQRGQNV---TVISNLPE--DDIKQLE-------------QR--------LGDNADV 53 (153)
T ss_dssp CCCSCEEEECC-SHHHHHHHHHHHHTTCCE---EEEECCCH--HHHHHHH-------------HH--------HCTTCEE
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCCE---EEEECCCh--HHHHHHH-------------Hh--------hcCCCeE
Confidence 45678999995 999999999999998654 67766421 0111111 10 1246889
Q ss_pred EecCCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 90 VPGDITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
+.||.+ +.+.+..+ ++++|+||-+.+
T Consensus 54 i~gd~~-------~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 54 IPGDSN-------DSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp EESCTT-------SHHHHHHHTTTTCSEEEECSS
T ss_pred EEcCCC-------CHHHHHHcChhhCCEEEEecC
Confidence 999998 55555454 789999998765
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00025 Score=70.11 Aligned_cols=85 Identities=14% Similarity=0.183 Sum_probs=60.1
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|+|.|| |++|+.+++.|.+. + .|.+..|+.+ ++. + ..+.+..+.
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~~-~---~v~~~~~~~~------~~~-~---------------------~~~~~~~~~ 62 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKDE-F---DVYIGDVNNE------NLE-K---------------------VKEFATPLK 62 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTT-S---EEEEEESCHH------HHH-H---------------------HTTTSEEEE
T ss_pred ccEEEEECC-CHHHHHHHHHHhcC-C---CeEEEEcCHH------HHH-H---------------------HhccCCcEE
Confidence 468999998 99999999988764 4 4566666432 111 0 124567788
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
.|+. +.+.+..+++++|+||++++.. + ...++++|.+.
T Consensus 63 ~d~~-------d~~~l~~~~~~~DvVi~~~p~~-~--------------~~~v~~~~~~~ 100 (365)
T 3abi_A 63 VDAS-------NFDKLVEVMKEFELVIGALPGF-L--------------GFKSIKAAIKS 100 (365)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCCGG-G--------------HHHHHHHHHHH
T ss_pred EecC-------CHHHHHHHHhCCCEEEEecCCc-c--------------cchHHHHHHhc
Confidence 8988 6666778889999999998742 1 02477888887
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00072 Score=57.90 Aligned_cols=80 Identities=18% Similarity=0.178 Sum_probs=52.6
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccC
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISE 85 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 85 (492)
+++...+++|+|+|+ |.+|..++..|.+.|. +|.++.|+..... ++. . ..
T Consensus 13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~---~V~vid~~~~~~~---~~~---------------------~--~~ 62 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGH---SVVVVDKNEYAFH---RLN---------------------S--EF 62 (155)
T ss_dssp ----CCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCGGGGG---GSC---------------------T--TC
T ss_pred hhcccCCCcEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHHHHH---HHH---------------------h--cC
Confidence 445667899999995 9999999999999885 5678877643211 000 0 13
Q ss_pred ceEEEecCCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 86 KITLVPGDITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 86 ~v~~v~gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
++..+.+|.. +.+.+..+ ++++|+||.+.+
T Consensus 63 g~~~~~~d~~-------~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 63 SGFTVVGDAA-------EFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp CSEEEESCTT-------SHHHHHTTTGGGCSEEEECSS
T ss_pred CCcEEEecCC-------CHHHHHHcCcccCCEEEEEeC
Confidence 4566778877 44434333 578999999876
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00036 Score=65.87 Aligned_cols=25 Identities=20% Similarity=0.445 Sum_probs=21.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhh
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRV 35 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~ 35 (492)
++++|.|+|+||.+|+.+++.+++.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~ 28 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALAL 28 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhC
Confidence 4579999999999999999998753
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0016 Score=57.31 Aligned_cols=74 Identities=16% Similarity=0.216 Sum_probs=52.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.+++|+|+| .|.+|..+++.|.+. |++| .++.|++.. .+.+. ..++..
T Consensus 38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V---~vid~~~~~---~~~~~------------------------~~g~~~ 86 (183)
T 3c85_A 38 GHAQVLILG-MGRIGTGAYDELRARYGKIS---LGIEIREEA---AQQHR------------------------SEGRNV 86 (183)
T ss_dssp TTCSEEEEC-CSHHHHHHHHHHHHHHCSCE---EEEESCHHH---HHHHH------------------------HTTCCE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhccCCeE---EEEECCHHH---HHHHH------------------------HCCCCE
Confidence 467899998 699999999999998 8754 677765321 11111 135667
Q ss_pred EecCCCCCCCCCCchhhHHHh--ccCccEEEEccc
Q 037479 90 VPGDITREDLGVKDSNLREEM--WNKLDVVINLAA 122 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~--~~~vd~Vih~Aa 122 (492)
+.||.+ +.+.+..+ ++++|+||.+.+
T Consensus 87 ~~gd~~-------~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 87 ISGDAT-------DPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp EECCTT-------CHHHHHTBCSCCCCCEEEECCS
T ss_pred EEcCCC-------CHHHHHhccCCCCCCEEEEeCC
Confidence 889988 44544455 678999998765
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0032 Score=61.35 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=28.3
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
.++|+|.||||.+|+.+++.|+++++.+..+.++.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 36899999999999999999987665555565554
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0092 Score=57.56 Aligned_cols=115 Identities=10% Similarity=0.040 Sum_probs=62.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++|.|+|| |.+|..++..|+..+. +..|.++.+.+.. .+....++.... .+. ..+...
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k---~~g~a~DL~~~~--------------~~~-~~~~i~ 67 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFKDK---TKGDAIDLEDAL--------------PFT-SPKKIY 67 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHH---HHHHHHHHHTTG--------------GGS-CCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHH---HHHHHhhHhhhh--------------hhc-CCcEEE
Confidence 4679999996 9999999999998764 4577777764211 111111111110 011 233333
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
.+| . ..++++|+||.+||..+- .+.-.+.++.|+.-.+.+.+.+.+. ....++.+
T Consensus 68 ~~~-------------~-~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilv 123 (326)
T 3vku_A 68 SAE-------------Y-SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLV 123 (326)
T ss_dssp ECC-------------G-GGGTTCSEEEECCCCC----------------CHHHHHHHHHTT-TCCSEEEE
T ss_pred ECc-------------H-HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEE
Confidence 322 1 445899999999996532 2344567889999999999998886 44444443
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0017 Score=58.00 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=30.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.|++|+||||+|-+|..+++.+...|. +|++..|+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~~ 72 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGA---RIYTTAGS 72 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTC---EEEEEESS
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCC---EEEEEeCC
Confidence 578999999999999999999998885 56888775
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0038 Score=59.60 Aligned_cols=38 Identities=32% Similarity=0.391 Sum_probs=32.3
Q ss_pred cCCCE-EEEe-CCc-----------------chhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 10 LENKT-ILVT-GAT-----------------GFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 10 ~~~~~-vlIT-Gat-----------------GflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
++|++ |||| ||| |-.|.++++.+++.|++| .++.|+..
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V---~lv~g~~s 90 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGV---LFLYRARS 90 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEE---EEEEETTS
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEE---EEEecCCC
Confidence 57888 9999 788 999999999999999754 78888654
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0076 Score=57.85 Aligned_cols=38 Identities=21% Similarity=0.214 Sum_probs=32.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
+++++++|+|| |-+|+.++..|.+.|. ++|++..|+.+
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~~ 189 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKDD 189 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSST
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCCc
Confidence 46899999997 8899999999999875 57889999754
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.024 Score=54.37 Aligned_cols=114 Identities=18% Similarity=0.105 Sum_probs=71.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+||+|.+|..++..|.....-+..+.++.+.+ .. ..+.+ ++... + ...++..+.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~-~G~a~--Dl~~~----------~------~~~~v~~~~~ 60 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VT-PGVAV--DLSHI----------P------TAVKIKGFSG 60 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-TH-HHHHH--HHHTS----------C------SSEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cc-hhHHH--HhhCC----------C------CCceEEEecC
Confidence 5899999999999999988877512345777877765 21 11111 11110 0 0012222222
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
+ + + ...++++|+||-+||..+- ...-.+.++.|+.-.+.+.+.+.+. ..+.++.
T Consensus 61 --~-------~-~--~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vl 115 (312)
T 3hhp_A 61 --E-------D-A--TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIG 115 (312)
T ss_dssp --S-------C-C--HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEE
T ss_pred --C-------C-c--HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEE
Confidence 1 1 1 2556899999999997542 3455778999999999999998876 3343333
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0025 Score=57.84 Aligned_cols=73 Identities=19% Similarity=0.292 Sum_probs=50.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+|+|+ |.+|+.+++.|.+.|++| .++.|++.. .+++. + ..++.++.|
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v---~vid~~~~~---~~~l~-------------~----------~~~~~~i~g 50 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGV---VIINKDREL---CEEFA-------------K----------KLKATIIHG 50 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCE---EEEESCHHH---HHHHH-------------H----------HSSSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeE---EEEECCHHH---HHHHH-------------H----------HcCCeEEEc
Confidence 57999996 999999999999998754 666664321 11111 1 135678999
Q ss_pred CCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 93 DITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
|.+ +.+.++.+ ++++|+||-+.+
T Consensus 51 d~~-------~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 51 DGS-------HKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CTT-------SHHHHHHHTCCTTCEEEECCS
T ss_pred CCC-------CHHHHHhcCcccCCEEEEecC
Confidence 999 55545443 678999996654
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=96.33 E-value=0.002 Score=62.90 Aligned_cols=39 Identities=18% Similarity=0.302 Sum_probs=29.9
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCC----CCCeEEEEEec
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQP----NVKKLYLLLRA 48 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~----~V~~i~~lvR~ 48 (492)
.|+.++|+|.||||.+|+.|++.|++.++ .+ .|..+.++
T Consensus 6 ~M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~-ei~~l~s~ 48 (352)
T 2nqt_A 6 VANATKVAVAGASGYAGGEILRLLLGHPAYADGRL-RIGALTAA 48 (352)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSE-EEEEEEES
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccE-EEEEEECC
Confidence 35557999999999999999999997641 34 56666654
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0052 Score=51.46 Aligned_cols=73 Identities=12% Similarity=0.165 Sum_probs=51.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|+|.|+ |.+|+.+++.|.+.|++| .++.|++.. .+++. ..++..+.
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v---~vid~~~~~---~~~~~------------------------~~g~~~i~ 55 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPL---VVIETSRTR---VDELR------------------------ERGVRAVL 55 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCE---EEEESCHHH---HHHHH------------------------HTTCEEEE
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCE---EEEECCHHH---HHHHH------------------------HcCCCEEE
Confidence 358999995 999999999999999754 777775321 11211 15678899
Q ss_pred cCCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 92 GDITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
||.+ +++.++.+ ++++|+||-+..
T Consensus 56 gd~~-------~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 56 GNAA-------NEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp SCTT-------SHHHHHHTTGGGCSEEEECCS
T ss_pred CCCC-------CHHHHHhcCcccCCEEEEECC
Confidence 9999 55544333 468999997764
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.05 Score=52.45 Aligned_cols=115 Identities=13% Similarity=0.084 Sum_probs=71.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|.|+|+ |.+|..++..|+..|. +..|.++.+.... .+....++... . ++...++....
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~~~k---~~g~a~DL~~~---------~-----~~~~~~v~i~~ 65 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVNKEK---AMGDVMDLNHG---------K-----AFAPQPVKTSY 65 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHH---HHHHHHHHHHT---------G-----GGSSSCCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecchHH---HHHHHHHHHhc---------c-----ccccCCeEEEe
Confidence 579999996 9999999999998874 3567777764211 11111011111 0 01112333332
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
+| . ..++++|+||.+||..+- ...-.+.++.|+...+.+.+.+.+. ....++.+
T Consensus 66 ~~-------------~-~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlv 120 (326)
T 3pqe_A 66 GT-------------Y-EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLV 120 (326)
T ss_dssp EC-------------G-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred Cc-------------H-HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEE
Confidence 22 1 345899999999997533 2345667899999999999999886 44444443
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.028 Score=53.90 Aligned_cols=115 Identities=16% Similarity=-0.002 Sum_probs=69.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+|| |.+|..++..|+..+. +..|.++.+++... +....++.....+ ....+.+...
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~---~g~a~DL~~~~~~--------------~~~~~~v~~~ 61 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDGMP---QGKALDMRESSPI--------------HGFDTRVTGT 61 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTTHH---HHHHHHHHHHHHH--------------HTCCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchHHH---HHHHHHHhccccc--------------cCCCcEEEEC
Confidence 68999996 9999999999998875 56778887765321 1111111111000 0112222211
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
| +. ..++++|+||-+||..+- ...-.+.++.|+.-.+.+.+.+.+. +...++.+
T Consensus 62 ~---------~~----~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~viv 116 (314)
T 3nep_X 62 N---------DY----GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIV 116 (314)
T ss_dssp S---------SS----GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEE
T ss_pred C---------CH----HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEe
Confidence 1 11 445899999999997532 2334567899999999999998886 44444433
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.038 Score=53.19 Aligned_cols=116 Identities=18% Similarity=0.113 Sum_probs=70.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|.|+|| |.+|..++-.|+..+. +..|.++.+.+........ ++.... .+ ...+.+..
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~~~~~g~~~---dl~~~~--------------~~-~~~~~i~~ 66 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIGEAM---DINHGL--------------PF-MGQMSLYA 66 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCHHHH---HHTTSC--------------CC-TTCEEEC-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChHHHHHHHH---HHHHhH--------------Hh-cCCeEEEE
Confidence 478999998 9999999999988764 5678888876543332110 111100 00 01222221
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
+ + . ..++++|+||.+|+...- .....+....|+...+.+.+.+.+. +...+|.+.|
T Consensus 67 ~----------~---~-~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (318)
T 1y6j_A 67 G----------D---Y-SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVS 123 (318)
T ss_dssp -----------C---G-GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECS
T ss_pred C----------C---H-HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 1 1 1 446899999999986532 2334567889999999999998886 4455555544
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.14 E-value=0.01 Score=58.15 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=27.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
+++|.|.||||++|..|++.|.+.++....+..+.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a 36 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 36 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence 46899999999999999998887654444555554
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.053 Score=52.15 Aligned_cols=115 Identities=17% Similarity=0.058 Sum_probs=71.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|+.++|.|+| +|.+|..++..|+..+. . .|.++.+.+... +....++.....+. .....+
T Consensus 3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~-~-~v~l~Di~~~~~---~g~a~dL~~~~~~~--------------~~~~~v 62 (321)
T 3p7m_A 3 MARKKITLVG-AGNIGGTLAHLALIKQL-G-DVVLFDIAQGMP---NGKALDLLQTCPIE--------------GVDFKV 62 (321)
T ss_dssp CCCCEEEEEC-CSHHHHHHHHHHHHTTC-C-EEEEECSSSSHH---HHHHHHHHTTHHHH--------------TCCCCE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCC-c-eEEEEeCChHHH---HHHHHHHHhhhhhc--------------CCCcEE
Confidence 5678999999 59999999999988775 2 677877765321 11111221111110 011121
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
...+ + . +.++++|+||.+|+..+- .....+.+..|+.-.+.+.+.+.+. ....++
T Consensus 63 ~~t~---------d---~-~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~v 118 (321)
T 3p7m_A 63 RGTN---------D---Y-KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN-CPNAFV 118 (321)
T ss_dssp EEES---------C---G-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred EEcC---------C---H-HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH-CCCcEE
Confidence 1110 1 2 456899999999986532 2345567889999999999998886 344333
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.038 Score=51.18 Aligned_cols=120 Identities=19% Similarity=0.141 Sum_probs=69.4
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhh------cCh----hhHHHHHhcCC
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEII------GKD----LFRVLKEKNGT 77 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~------~~~----~f~~l~~~~~~ 77 (492)
+-+++++|+|.|+ |-+|+.+++.|.+.|. ++|.++.+..-..+-..| .++ ..+ .-+++++..|
T Consensus 27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv--~~i~lvD~d~v~~sNl~R---q~l~~~~diG~~Ka~~~~~~l~~~np- 99 (249)
T 1jw9_B 27 EALKDSRVLIVGL-GGLGCAASQYLASAGV--GNLTLLDFDTVSLSNLQR---QTLHSDATVGQPKVESARDALTRINP- 99 (249)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECCCBCCGGGGGT---CTTCCGGGTTSBHHHHHHHHHHHHCT-
T ss_pred HHHhCCeEEEEee-CHHHHHHHHHHHHcCC--CeEEEEcCCCcccccCCc---ccccChhhcCcHHHHHHHHHHHHHCC-
Confidence 3356789999995 7799999999999884 788888877532221111 000 000 1122222222
Q ss_pred chhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeE
Q 037479 78 HLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVL 157 (492)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~ 157 (492)
.-++..+..+++ +.+ ...+++++|+||.+... .. .-..+.++|++. + ..+
T Consensus 100 ------~~~v~~~~~~~~-------~~~-~~~~~~~~DvVi~~~d~------~~--------~~~~l~~~~~~~-~-~p~ 149 (249)
T 1jw9_B 100 ------HIAITPVNALLD-------DAE-LAALIAEHDLVLDCTDN------VA--------VRNQLNAGCFAA-K-VPL 149 (249)
T ss_dssp ------TSEEEEECSCCC-------HHH-HHHHHHTSSEEEECCSS------HH--------HHHHHHHHHHHH-T-CCE
T ss_pred ------CcEEEEEeccCC-------HhH-HHHHHhCCCEEEEeCCC------HH--------HHHHHHHHHHHc-C-CCE
Confidence 134666666666 333 34667899999988642 11 112355666665 3 346
Q ss_pred EEeeece
Q 037479 158 VHVSTAF 164 (492)
Q Consensus 158 V~vST~~ 164 (492)
|+.+...
T Consensus 150 i~~~~~g 156 (249)
T 1jw9_B 150 VSGAAIR 156 (249)
T ss_dssp EEEEEEB
T ss_pred EEeeecc
Confidence 7765543
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0071 Score=58.52 Aligned_cols=36 Identities=19% Similarity=0.140 Sum_probs=31.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.+++||||||+|.+|..+++.+...|. +|++..|+.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~V~~~~~~~ 175 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGA---KLIGTVGTA 175 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 578999999999999999999998885 568888753
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=95.88 E-value=0.044 Score=50.76 Aligned_cols=127 Identities=17% Similarity=0.109 Sum_probs=70.3
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcC----hhhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGK----DLFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~----~~f~~l~~~~~~~~ 79 (492)
++-+++++|+|.|+.| +|+.+++.|.+.| |++|.++.+..-..+-..|-. .+=+.. ..-+++++..|
T Consensus 23 q~~l~~~~VlvvG~Gg-lG~~va~~La~~G--vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 96 (251)
T 1zud_1 23 QQKLLDSQVLIIGLGG-LGTPAALYLAGAG--VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP--- 96 (251)
T ss_dssp HHHHHTCEEEEECCST-THHHHHHHHHHTT--CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT---
T ss_pred HHHHhcCcEEEEccCH-HHHHHHHHHHHcC--CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC---
Confidence 3456789999999755 9999999999987 478888765432211111100 000000 01122333222
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-++..+..+++ +++ ...+++++|+||.+... .. .-..+-++|.+. + ..+|+
T Consensus 97 ----~~~v~~~~~~~~-------~~~-~~~~~~~~DvVi~~~d~------~~--------~r~~l~~~~~~~-~-~p~i~ 148 (251)
T 1zud_1 97 ----DIQLTALQQRLT-------GEA-LKDAVARADVVLDCTDN------MA--------TRQEINAACVAL-N-TPLIT 148 (251)
T ss_dssp ----TSEEEEECSCCC-------HHH-HHHHHHHCSEEEECCSS------HH--------HHHHHHHHHHHT-T-CCEEE
T ss_pred ----CCEEEEEeccCC-------HHH-HHHHHhcCCEEEECCCC------HH--------HHHHHHHHHHHh-C-CCEEE
Confidence 134566666665 333 34677889999988542 11 112345566665 3 45787
Q ss_pred eeeceeec
Q 037479 160 VSTAFVWG 167 (492)
Q Consensus 160 vST~~v~~ 167 (492)
.++....|
T Consensus 149 ~~~~g~~G 156 (251)
T 1zud_1 149 ASAVGFGG 156 (251)
T ss_dssp EEEEBTEE
T ss_pred Eeccccce
Confidence 77644443
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.0078 Score=58.40 Aligned_cols=36 Identities=14% Similarity=0.174 Sum_probs=31.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.+++|+||||+|.+|..+++.+...|. +|+++.|+.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~Vi~~~~~~ 180 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGA---TVIGTVSTE 180 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 578999999999999999999988884 668888863
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.015 Score=56.44 Aligned_cols=34 Identities=26% Similarity=0.448 Sum_probs=27.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhC-CCCCeEEEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQ-PNVKKLYLLL 46 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g-~~V~~i~~lv 46 (492)
.++|.|.||||.+|+.+++.|++++ +.+ .+.++.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~-elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVD-ELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEE-EEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCE-EEEEEE
Confidence 4789999999999999999998864 444 455555
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.0086 Score=58.07 Aligned_cols=36 Identities=17% Similarity=0.104 Sum_probs=30.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|++||||||+|-+|..+++.+...|. +|++..|+.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~~~ 180 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGC---KVVGAAGSD 180 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 578999999999999999999998885 568887753
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.025 Score=52.99 Aligned_cols=39 Identities=23% Similarity=0.485 Sum_probs=28.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
|+.++|.|+||+|.+|+.+++.+.+. +++.-+.++.|+.
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG 43 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence 45679999999999999999999874 4553334455653
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.022 Score=55.20 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=26.7
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
|++|.|.||||++|..|++.|.+..+.+..+..+.
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~ 35 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA 35 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence 46899999999999999997777543333555554
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.016 Score=56.50 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=32.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
-.|++|||+||+|-+|..+++.+...|. +|+++.|+..
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~V~~~~~~~~ 205 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGY---RVLGIDGGEG 205 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECSTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---cEEEEcCCHH
Confidence 3578999999999999999999888884 6788888643
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.046 Score=54.95 Aligned_cols=102 Identities=8% Similarity=0.138 Sum_probs=64.1
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhC-CCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQ-PNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g-~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.++|+|.| .|-||+.++.+|.+.. ..+..|.+....+......+. .++.+.
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~---------------------------~g~~~~ 64 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQ---------------------------YGVSFK 64 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHH---------------------------HTCEEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhh---------------------------cCCcee
Confidence 46899999 9999999999999874 222467766554444332211 134566
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
..+++..+ ..+.+..++++.|+|||++-.. . ...++++|.+. + +-|++|+-
T Consensus 65 ~~~Vdadn----v~~~l~aLl~~~DvVIN~s~~~---~------------~l~Im~aclea-G---v~YlDTa~ 115 (480)
T 2ph5_A 65 LQQITPQN----YLEVIGSTLEENDFLIDVSIGI---S------------SLALIILCNQK-G---ALYINAAT 115 (480)
T ss_dssp ECCCCTTT----HHHHTGGGCCTTCEEEECCSSS---C------------HHHHHHHHHHH-T---CEEEESSC
T ss_pred EEeccchh----HHHHHHHHhcCCCEEEECCccc---c------------CHHHHHHHHHc-C---CCEEECCC
Confidence 66666322 1133445666679999965321 1 23478899987 3 46888863
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.026 Score=54.02 Aligned_cols=38 Identities=26% Similarity=0.274 Sum_probs=32.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.++++++|+|| |-.|+.++..|.+.|. ++|++..|+.+
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~--~~v~v~nRt~~ 183 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGI--KEIKLFNRKDD 183 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSST
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCC--CEEEEEECCCc
Confidence 46899999997 8899999999999875 67899999744
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=95.51 E-value=0.068 Score=50.63 Aligned_cols=116 Identities=15% Similarity=0.025 Sum_probs=71.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+|| |.+|+.++-.|+.++ -+..+.++...+.... .+-+ ++.... .+.........+
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~-~~~el~L~Di~~~~~~-G~a~--DL~h~~--------------~~~~~~~~i~~~ 61 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDLAV-GEAM--DLAHAA--------------AGIDKYPKIVGG 61 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHHHH-HHHH--HHHHHH--------------GGGTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeCCCCcch-hhhh--hhhccc--------------ccCCCCCeEecC
Confidence 68999995 999999999988775 4677777766431110 0000 111100 001112222221
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vS 161 (492)
+ + . +.++++|+|+-+||..+- ...-.+.++.|..-.+.+.+.+.+. ..+.++.+=
T Consensus 62 ~---------d---~-~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvv 117 (294)
T 2x0j_A 62 A---------D---Y-SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVV 117 (294)
T ss_dssp S---------C---G-GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEEC
T ss_pred C---------C---H-HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEe
Confidence 1 1 1 345899999999997653 3556778999999999999999886 445554433
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.021 Score=55.90 Aligned_cols=40 Identities=18% Similarity=0.280 Sum_probs=29.1
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
...|+.++|.|.||||.+|+.+++.|++. +++ .+..+.+.
T Consensus 11 ~~~M~~~kV~IiGAtG~iG~~llr~L~~~-p~~-elvai~~~ 50 (359)
T 1xyg_A 11 VKPEKDIRIGLLGASGYTGAEIVRLLANH-PHF-QVTLMTAD 50 (359)
T ss_dssp ----CCEEEEEECCSSHHHHHHHHHHHTC-SSE-EEEEEBCS
T ss_pred cccccCcEEEEECcCCHHHHHHHHHHHcC-CCc-EEEEEeCc
Confidence 34466689999999999999999999875 455 55666553
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=95.40 E-value=0.018 Score=56.32 Aligned_cols=36 Identities=3% Similarity=-0.039 Sum_probs=31.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|++|+||||+|-+|..+++.+...|. +|++..|+.
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~Vi~~~~~~ 197 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGA---IPLVTAGSQ 197 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 578999999999999999999988885 568888764
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.015 Score=56.68 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=27.7
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.++|.|.||||.+|+.+++.|++. +++ .+..+.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-elv~v~s~ 38 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYL-EVKQVTSR 38 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTE-EEEEEBCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEECc
Confidence 479999999999999999999875 444 55565553
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.39 E-value=0.016 Score=56.64 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=31.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|++|+|+||+|-+|..+++.+...|. +|++..|++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga---~Vi~~~~~~ 205 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGL---KILGTAGTE 205 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCh
Confidence 578999999999999999999988885 568888764
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=95.34 E-value=0.18 Score=48.46 Aligned_cols=110 Identities=7% Similarity=0.039 Sum_probs=68.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHH---HhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN---EIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~---~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++|.|+|| |.+|..++-.|+..+. +..|.++.+.. ++++. ++.... .+ ..++.
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~-~~el~L~Di~~------~~~~g~~~dl~~~~--------------~~-~~~~~ 65 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFK------DKTKGDAIDLSNAL--------------PF-TSPKK 65 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCH------HHHHHHHHHHHTTG--------------GG-SCCCE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCc------hHhHHHHHHHHHHH--------------Hh-cCCeE
Confidence 368999998 9999999999988764 56788887732 22221 111110 01 12333
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
+..+ + ...++++|+||.+|+...- ...-...+..|+.-.+.+.+.+.+. ....+|.
T Consensus 66 i~~~----------~----~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~ii 122 (326)
T 2zqz_A 66 IYSA----------E----YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFL 122 (326)
T ss_dssp EEEC----------C----GGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEE
T ss_pred EEEC----------C----HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEE
Confidence 3221 1 1446899999999986532 2334566888999999999988876 4444433
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.077 Score=50.84 Aligned_cols=119 Identities=17% Similarity=0.084 Sum_probs=71.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+.++|.|+|+ |.+|..++..|+..|. ..|.+..++... ++.+... .++.+..... + ...++..
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~~----~~~~g~a--~dl~~~~~~~-~------~~~~i~~- 69 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQLE----NPTKGKA--LDMLEASPVQ-G------FDANIIG- 69 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGGH----HHHHHHH--HHHHHHHHHH-T------CCCCEEE-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccchH----HHHHHhh--hhHHHhhhhc-c------CCCEEEE-
Confidence 4579999996 9999999999998875 467888776310 1111000 1111110000 0 0012221
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhccccee-EEEee
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIV-LVHVS 161 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~-~V~vS 161 (492)
.. + . ..++++|+||-+||..+- ...-.+.++.|+.-.+.+.+.+.+. .... ++.+|
T Consensus 70 t~----------d---~-~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvs 127 (315)
T 3tl2_A 70 TS----------D---Y-ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVLT 127 (315)
T ss_dssp ES----------C---G-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred cC----------C---H-HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECC
Confidence 11 1 1 455899999999987543 2345677899999999999988876 3343 34444
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=95.30 E-value=0.017 Score=52.77 Aligned_cols=72 Identities=13% Similarity=0.031 Sum_probs=49.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
..++|+|.|+ |.+|+.+++.|.+.|+ |.++.|++.. .+.+ . .++.++
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~----v~vid~~~~~---~~~~------------------------~-~~~~~i 54 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV----FVLAEDENVR---KKVL------------------------R-SGANFV 54 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE----EEEESCGGGH---HHHH------------------------H-TTCEEE
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe----EEEEECCHHH---HHHH------------------------h-cCCeEE
Confidence 3578999997 9999999999998774 4666554321 1111 1 357889
Q ss_pred ecCCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 91 PGDITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
.||.+ +.+.++.+ ++++|.||-+.+
T Consensus 55 ~gd~~-------~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 55 HGDPT-------RVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp ESCTT-------CHHHHHHTTCTTCSEEEECCS
T ss_pred EcCCC-------CHHHHHhcCcchhcEEEEcCC
Confidence 99998 55555444 679999997754
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=95.29 E-value=0.18 Score=48.25 Aligned_cols=109 Identities=11% Similarity=0.047 Sum_probs=69.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHH---HhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN---EIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~---~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++|.|+|| |.+|..++-.|+..+. +..|.++.+.+ ++++. ++.... .+. ..+.+
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~------~k~~g~a~dl~~~~--------------~~~-~~~~v 57 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGV-AREVVLVDLDR------KLAQAHAEDILHAT--------------PFA-HPVWV 57 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHHHHHTTG--------------GGS-CCCEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHHHHHHHHHHHhH--------------hhc-CCeEE
Confidence 58999998 9999999999988753 66788887752 22221 111110 001 22333
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
..+| . +.++++|+||.+|+...- ...-......|+.-.+.+.+.+++. +...++.
T Consensus 58 ~~~~-------------~-~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~ii 113 (310)
T 2xxj_A 58 WAGS-------------Y-GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLL 113 (310)
T ss_dssp EECC-------------G-GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred EECC-------------H-HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEE
Confidence 2221 1 446899999999986542 2334566888999999999988886 4444433
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.014 Score=57.56 Aligned_cols=36 Identities=11% Similarity=0.195 Sum_probs=30.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+.+++|+|+|+ |-+|..+++.+...|. +|++..|+.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga---~V~~~d~~~ 199 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGA---QVTILDVNH 199 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 56799999999 9999999999999885 567877753
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=95.20 E-value=0.12 Score=49.71 Aligned_cols=118 Identities=13% Similarity=0.146 Sum_probs=72.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+.++|.|+|| |.+|..++..|+..+. +..|.++.+.+ ++++..... +.... .+....+.+.
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~------~~~~g~~~d------l~~~~-----~~~~~~~~v~ 65 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDT------EKVRGDVMD------LKHAT-----PYSPTTVRVK 65 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCH------HHHHHHHHH------HHHHG-----GGSSSCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHhhhhhhh------HHhhh-----hhcCCCeEEE
Confidence 4579999998 9999999999998764 45666766542 222211100 00000 0111223322
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
. | + ...++++|+||-+|+...- .......+..|+.-.+.+.+.+.+. ....+|.+.|
T Consensus 66 ~-~---------~----~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 66 A-G---------E----YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp E-C---------C----GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred e-C---------C----HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 2 1 1 1446899999999987532 2334566888999999999988887 4555555544
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.13 Score=49.82 Aligned_cols=112 Identities=18% Similarity=0.094 Sum_probs=67.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCC-----eEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhcc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVK-----KLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALIS 84 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~-----~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~ 84 (492)
++.-+|.|+||+|.||+.|+-.|.. ++-+. .+.++...+.. ...+-...++..... .
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~-~~l~~~~~~~eL~L~Di~~~~-~~~~Gva~DL~~~~~----------------~ 83 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIAR-GALLGPTTPVELRLLDIEPAL-KALAGVEAELEDCAF----------------P 83 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHH-TTTTCTTCCEEEEEECCGGGH-HHHHHHHHHHHHTTC----------------T
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHh-ccccCCCCccEEEEECCCCcc-ccchhhhhhhhhcCc----------------c
Confidence 4456999999999999999987765 33222 46666554321 111111111111100 0
Q ss_pred CceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 85 EKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 85 ~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
.....+.++ + ....++++|+||-+||..+- ...-.+.++.|..-.+.+.+...+.
T Consensus 84 ~~~~~~~~~---------~---~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~ 139 (345)
T 4h7p_A 84 LLDKVVVTA---------D---PRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAV 139 (345)
T ss_dssp TEEEEEEES---------C---HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEcC---------C---hHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhh
Confidence 111222221 1 13567999999999997643 3456778999999999999988774
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.15 Score=48.88 Aligned_cols=114 Identities=10% Similarity=0.055 Sum_probs=66.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++|.|+|| |.+|..++-.|+..+. +..|.++.+.+.. .+....++.... .+ ...+.+..
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~~---~~g~~~dl~~~~--------------~~-~~~~~v~~ 64 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKDR---TKGDALDLEDAQ--------------AF-TAPKKIYS 64 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHHHGGG--------------GG-SCCCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCchH---HHHHHHHHHHHH--------------Hh-cCCeEEEE
Confidence 369999998 9999999999988764 5678888773211 111111111100 01 12333322
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
| + ...++++|+||.+|+...-. ..-.+.+..|+.-.+.+.+.+++. +...+|.+
T Consensus 65 -~---------~----~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 119 (318)
T 1ez4_A 65 -G---------E----YSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLV 119 (318)
T ss_dssp -C---------C----GGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred -C---------C----HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 1 14468999999999865321 223456788999999999988887 44444443
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=95.06 E-value=0.11 Score=49.98 Aligned_cols=115 Identities=18% Similarity=0.068 Sum_probs=68.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|+.++|.|+|| |.+|..++..|+..+. . .|.++.+.+... +....++.....+. . ...++..
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~-~-~v~L~Di~~~~~---~g~~~dl~~~~~~~----~--------~~~~v~~ 66 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKEL-G-DVVLFDIAEGTP---QGKGLDIAESSPVD----G--------FDAKFTG 66 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSHH---HHHHHHHHHHHHHH----T--------CCCCEEE
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCchhH---HHHHHHHhchhhhc----C--------CCCEEEE
Confidence 56789999998 9999999999998876 2 677777755321 11110111100000 0 0112211
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
..| . +.++++|+||.+|+..+- .....+.+..|+.-.+.+.+.+.+. ....++
T Consensus 67 -t~d-------------~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~i 120 (324)
T 3gvi_A 67 -AND-------------Y-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFV 120 (324)
T ss_dssp -ESS-------------G-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH-CTTCEE
T ss_pred -eCC-------------H-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEE
Confidence 111 2 456899999999986532 2333456788999999999988876 344333
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.054 Score=52.55 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=32.3
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
.|++|||+||+|-+|...++.+...|. +|++..|+...
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~~~ 181 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNF---RLIAVTRNNKH 181 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSSTT
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCC---EEEEEeCCHHH
Confidence 578999999999999999988888884 67888887654
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=94.97 E-value=0.041 Score=53.25 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=27.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
++|.|.||||++|..|++.|.+. +++ .+..+.++.
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~-p~~-el~~l~s~~ 39 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRH-PHM-NITALTVSA 39 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHC-TTE-EEEEEEEET
T ss_pred eEEEEECCCChHHHHHHHHHHhC-CCC-cEEEEEecC
Confidence 68999999999999999988874 555 555555443
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=94.96 E-value=0.23 Score=48.32 Aligned_cols=123 Identities=12% Similarity=0.115 Sum_probs=72.7
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcC----hhhHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGK----DLFRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~----~~f~~l~~~~~~~~ 79 (492)
++-+++++|+|.|+ |-+|+.+++.|.+.| |++|.++.+..-..+-..|-. .+-... ..-+++++-.|
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 186 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSG--IGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS--- 186 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC---
Confidence 56678899999996 679999999999988 588888887654333222210 000000 11223333333
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-+++.+..+++. ...... +++.|+||.+... +.+ .-..+-++|.+. + +.+|+
T Consensus 187 ----~v~v~~~~~~i~~-------~~~~~~-~~~~DlVvd~~Dn--~~~-----------~r~~ln~~c~~~-~-~p~i~ 239 (353)
T 3h5n_A 187 ----EISVSEIALNIND-------YTDLHK-VPEADIWVVSADH--PFN-----------LINWVNKYCVRA-N-QPYIN 239 (353)
T ss_dssp ----TSEEEEEECCCCS-------GGGGGG-SCCCSEEEECCCC--STT-----------HHHHHHHHHHHT-T-CCEEE
T ss_pred ----CCeEEEeecccCc-------hhhhhH-hccCCEEEEecCC--hHH-----------HHHHHHHHHHHh-C-CCEEE
Confidence 1457777787773 331334 7899999997632 110 111244567775 4 45777
Q ss_pred eee
Q 037479 160 VST 162 (492)
Q Consensus 160 vST 162 (492)
.+.
T Consensus 240 ~~~ 242 (353)
T 3h5n_A 240 AGY 242 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=94.92 E-value=0.19 Score=49.13 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=64.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCe---EEE--EEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKK---LYL--LLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~---i~~--lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
..+|.||||+|.+|.+++-.|+..+ -+.. |.+ +..+.. ....+-...++..... . +..+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~-l~~e~~~l~L~d~d~~~~-~~~~~G~amDL~h~~~-------------p-~~~~ 95 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGE-VFGQDQPIALKLLGSERS-FQALEGVAMELEDSLY-------------P-LLRE 95 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTT-TTCTTCCEEEEEECCGGG-HHHHHHHHHHHHTTTC-------------T-TEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHcCC-cCCCCceeEEEecCccch-hhhhHHHHHhHHhhhh-------------h-hcCC
Confidence 4689999999999999999998754 2222 333 222221 0011111101111100 0 0112
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccC-cchhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTN-FDERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+.+ . ..+ ...++++|+||-+||..+ ..+.-.+.++.|+.-.+.+.+.+.+.
T Consensus 96 v~i-----~-------~~~--y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~ 147 (375)
T 7mdh_A 96 VSI-----G-------IDP--YEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 147 (375)
T ss_dssp EEE-----E-------SCH--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEE-----e-------cCC--HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 222 1 111 256689999999998754 33456778999999999999888874
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=94.92 E-value=0.31 Score=45.94 Aligned_cols=123 Identities=13% Similarity=0.139 Sum_probs=67.7
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHH--HhhcCh----hhHHHHHhcCCchh
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHN--EIIGKD----LFRVLKEKNGTHLN 80 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~--~~~~~~----~f~~l~~~~~~~~~ 80 (492)
++-+++++|+|.| .|-+|+.+++.|.+.| |++|.++.+..-..+-..|..- +-...+ .-++|++-.|
T Consensus 31 q~kL~~~~VlVvG-aGGlGs~va~~La~aG--VG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP---- 103 (292)
T 3h8v_A 31 YEKIRTFAVAIVG-VGGVGSVTAEMLTRCG--IGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP---- 103 (292)
T ss_dssp -CGGGGCEEEEEC-CSHHHHHHHHHHHHHT--CSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT----
T ss_pred HHHHhCCeEEEEC-cCHHHHHHHHHHHHcC--CCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC----
Confidence 3456778999999 5779999999999988 5888888776544443444100 000001 1223333333
Q ss_pred hhccCceEEEecCCCCCCCCCCchhhHHHhc-----------cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHH
Q 037479 81 ALISEKITLVPGDITREDLGVKDSNLREEMW-----------NKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~-----------~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
.-+++.+..+++ +.+..+.++ +++|+||.+.-. .. .-..+-++|.
T Consensus 104 ---~v~v~~~~~~l~-------~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn------~~--------~R~~in~~c~ 159 (292)
T 3h8v_A 104 ---DVLFEVHNYNIT-------TVENFQHFMDRISNGGLEEGKPVDLVLSCVDN------FE--------ARMTINTACN 159 (292)
T ss_dssp ---TSEEEEECCCTT-------SHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS------HH--------HHHHHHHHHH
T ss_pred ---CcEEEEecccCC-------cHHHHHHHhhhhcccccccCCCCCEEEECCcc------hh--------hhhHHHHHHH
Confidence 145667777776 322233332 689999987531 11 1123455676
Q ss_pred hcccceeEEEeee
Q 037479 150 KCAKLIVLVHVST 162 (492)
Q Consensus 150 ~~~~~~~~V~vST 162 (492)
+. + +.+|+.+.
T Consensus 160 ~~-~-~Pli~~gv 170 (292)
T 3h8v_A 160 EL-G-QTWMESGV 170 (292)
T ss_dssp HH-T-CCEEEEEE
T ss_pred Hh-C-CCEEEeee
Confidence 65 3 35777654
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=94.91 E-value=0.098 Score=50.42 Aligned_cols=117 Identities=17% Similarity=0.070 Sum_probs=70.8
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
....++|.|+|| |.+|..++..|+..|. +..|.++.+... ..+....++.....|. ....
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~---~~~g~a~DL~~~~~~~---------------~~~~ 75 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDL-ADELALVDVIED---KLKGEMMDLQHGSLFL---------------KTPK 75 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCHH---HHHHHHHHHHHTGGGC---------------SCCE
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEeCChH---HHHHHHHhhhhhhhcc---------------CCCe
Confidence 356789999997 9999999999998763 456777766421 1111111121111110 1111
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.+..+ + . ..++++|+||.+||..+- .+.-.+.++.|+.-.+.+.+.+.+. ....++.
T Consensus 76 i~~~~---------d---~-~~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vl 133 (331)
T 4aj2_A 76 IVSSK---------D---Y-SVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLL 133 (331)
T ss_dssp EEECS---------S---G-GGGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred EEEcC---------C---H-HHhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEE
Confidence 12111 1 1 235899999999997542 2334567899999999999988886 4444443
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.023 Score=55.14 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=30.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|++|||+||+|-+|..+++.+...|. +|++..|+.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 184 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGC---RVVGIAGGA 184 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 578999999999999999998888885 668888764
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=94.88 E-value=0.3 Score=46.22 Aligned_cols=114 Identities=15% Similarity=0.019 Sum_probs=70.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+|| |.+|..++..|+..+. +..|.+..+.+.. ++.+.+ + +....+ .......+...
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~~~------~~g~~~-----d-l~~~~~-----~~~~~~~i~~t 61 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDL------AVGEAM-----D-LAHAAA-----GIDKYPKIVGG 61 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHH------HHHHHH-----H-HHHHHH-----TTTCCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECChHH------HHHHHH-----H-HHhhhh-----hcCCCCEEEEe
Confidence 68999999 9999999999988874 3567888775422 110000 0 100000 00011122111
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
+ + .+.++++|+||.+|+..+- .....+.+..|+.-.+.+.+.+.+. +...++.
T Consensus 62 --~-------d----~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~ii 115 (294)
T 1oju_A 62 --A-------D----YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKIL 115 (294)
T ss_dssp --S-------C----GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEE
T ss_pred --C-------C----HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEE
Confidence 0 1 2556899999999997542 2345667899999999999998887 4444433
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.033 Score=53.67 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=31.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|++|||+||+|-+|...++.+...|. +|++..|++
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 175 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGA---KLIGTVSSP 175 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 578999999999999999998888885 668888754
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=94.81 E-value=0.052 Score=54.22 Aligned_cols=73 Identities=21% Similarity=0.246 Sum_probs=51.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+++|+|.|+ |-+|+.+++.|.+.|.+| .++.++... .+.+. ..++.++.
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~v---vvId~d~~~---v~~~~------------------------~~g~~vi~ 52 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKM---VVLDHDPDH---IETLR------------------------KFGMKVFY 52 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCE---EEEECCHHH---HHHHH------------------------HTTCCCEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCE---EEEECCHHH---HHHHH------------------------hCCCeEEE
Confidence 468999995 999999999999988654 666665321 11111 14567899
Q ss_pred cCCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 92 GDITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
||.+ +.+.++.+ ++++|+||-+..
T Consensus 53 GDat-------~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 53 GDAT-------RMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp SCTT-------CHHHHHHTTTTTCSEEEECCS
T ss_pred cCCC-------CHHHHHhcCCCccCEEEECCC
Confidence 9999 55555444 578999987654
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=94.78 E-value=0.14 Score=48.96 Aligned_cols=116 Identities=11% Similarity=0.087 Sum_probs=66.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|.|+|| |.+|..++..|+..|. + .|.++.+++.. .+....++.....+ . . ...++.. ..
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~-~-~v~L~Di~~~~---~~g~~~dl~~~~~~-----~-~------~~~~i~~-t~ 63 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL-G-DIVLLDIVEGV---PQGKALDLYEASPI-----E-G------FDVRVTG-TN 63 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-S-EEEEECSSSSH---HHHHHHHHHTTHHH-----H-T------CCCCEEE-ES
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC-C-eEEEEeCCccH---HHHHHHhHHHhHhh-----c-C------CCeEEEE-CC
Confidence 68999998 9999999999988774 2 36666665321 11111111111000 0 0 0011211 01
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
| . ..++++|+||.+|+...-. ....+....|....+.+.+.+.+. ....+|.+.|
T Consensus 64 d-------------~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t 119 (309)
T 1ur5_A 64 N-------------Y-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVN 119 (309)
T ss_dssp C-------------G-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECC
T ss_pred C-------------H-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcC
Confidence 1 2 4468999999999865322 222345678888889999988886 4566666554
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=94.78 E-value=0.038 Score=53.78 Aligned_cols=36 Identities=28% Similarity=0.235 Sum_probs=30.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~ 49 (492)
.+++||||||+|-+|..+++.+... |. +|++..|++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga---~Vi~~~~~~ 206 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGA---TIIGVDVRE 206 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCC---EEEEEESSH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCC---eEEEEcCCH
Confidence 5789999999999999999998888 85 568887753
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=94.75 E-value=0.14 Score=53.60 Aligned_cols=129 Identities=17% Similarity=0.188 Sum_probs=75.7
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTH 78 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~ 78 (492)
.++-+++.+|+|.|+ |-+|..+++.|.+.| |++|.++....-..+-..|-. .+=++.. .-.++++-.|
T Consensus 11 ~Q~kL~~s~VlVVGa-GGLGsevak~La~aG--VG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP-- 85 (640)
T 1y8q_B 11 LAEAVAGGRVLVVGA-GGIGCELLKNLVLTG--FSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYP-- 85 (640)
T ss_dssp HHHHHHHCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCT--
T ss_pred HHHHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCC--
Confidence 345567789999996 779999999999988 588888876654333222210 0000001 1223333323
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEE
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLV 158 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V 158 (492)
.-+|..+..+++..+ ....+++++|+||.+... +..-..+-++|.+. + ..+|
T Consensus 86 -----~v~V~a~~~~i~~~~-------~~~~~~~~~DlVvda~Dn--------------~~aR~~ln~~c~~~-~-iPlI 137 (640)
T 1y8q_B 86 -----KANIVAYHDSIMNPD-------YNVEFFRQFILVMNALDN--------------RAARNHVNRMCLAA-D-VPLI 137 (640)
T ss_dssp -----TCEEEEEESCTTSTT-------SCHHHHTTCSEEEECCSC--------------HHHHHHHHHHHHHH-T-CCEE
T ss_pred -----CCeEEEEecccchhh-------hhHhhhcCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEE
Confidence 146777888886422 112566899999988532 11223345566665 3 3577
Q ss_pred Eeeeceeec
Q 037479 159 HVSTAFVWG 167 (492)
Q Consensus 159 ~vST~~v~~ 167 (492)
+.++.+..|
T Consensus 138 ~~g~~G~~G 146 (640)
T 1y8q_B 138 ESGTAGYLG 146 (640)
T ss_dssp EEEEETTEE
T ss_pred EEEEecccc
Confidence 777655444
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=94.75 E-value=0.054 Score=52.61 Aligned_cols=37 Identities=19% Similarity=0.281 Sum_probs=31.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.|++|||+||+|-+|...++.+...|. +|++..|+..
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga---~Vi~~~~~~~ 195 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGA---KVIAVVNRTA 195 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence 578999999999999999998888885 6688888654
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=94.73 E-value=0.027 Score=55.10 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=30.8
Q ss_pred CC--CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 11 EN--KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~--~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.| ++||||||+|-+|..+++.+...|. ++|++..|+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~ 195 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGT 195 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESC
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCC
Confidence 46 8999999999999999999888885 366888875
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=94.52 E-value=0.076 Score=52.05 Aligned_cols=36 Identities=6% Similarity=0.251 Sum_probs=27.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~ 48 (492)
++|.|.||||++|+.|+++|+.. ...+..|+++..+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~ 38 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS 38 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence 58999999999999999965553 3345577777654
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=94.52 E-value=0.04 Score=53.36 Aligned_cols=36 Identities=11% Similarity=0.096 Sum_probs=30.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|++|||+||+|-+|...++.+...|. +|++..|+.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 183 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGA---HTIAVASTD 183 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 578999999999999999998888784 668888753
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.49 E-value=0.044 Score=53.23 Aligned_cols=36 Identities=8% Similarity=0.026 Sum_probs=30.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.+++|||+||+|-+|..+++.+...|. +|++..|+.
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~---~Vi~~~~~~ 201 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGA---RVIATAGSE 201 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 578999999999999999998888885 568888753
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=94.45 E-value=0.15 Score=49.83 Aligned_cols=34 Identities=6% Similarity=0.282 Sum_probs=24.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCC-CCCeEEEEE
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQP-NVKKLYLLL 46 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~-~V~~i~~lv 46 (492)
++|.|.||||++|..|+++||..-+ ....+..+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 35 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFS 35 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 5899999999999999995555433 123555553
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.047 Score=53.32 Aligned_cols=36 Identities=14% Similarity=0.263 Sum_probs=31.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|++|||+||+|-+|..+++.+...|. +|++..|+.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 202 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGA---EVYATAGST 202 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 578999999999999999999888885 578888764
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=94.41 E-value=0.036 Score=52.29 Aligned_cols=37 Identities=14% Similarity=0.124 Sum_probs=31.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+++++++|+|| |-+|+.++..|.+.|. ++|++..|+.
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~--~~v~i~~R~~ 161 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT 161 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEECCH
Confidence 56899999997 8899999999999875 5778888864
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=94.40 E-value=0.15 Score=49.92 Aligned_cols=35 Identities=6% Similarity=0.233 Sum_probs=25.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCC-CCCeEEEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQP-NVKKLYLLL 46 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~-~V~~i~~lv 46 (492)
+++|.|.||||++|..|+++||..-+ .+..+..+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 39 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFS 39 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEe
Confidence 47999999999999999995555433 133555553
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.20 E-value=0.062 Score=52.42 Aligned_cols=33 Identities=18% Similarity=0.377 Sum_probs=27.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
.++|.|.||||.+|+.+++.|++. +++ .|..+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKH-PYL-ELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTC-SSE-EEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhC-CCc-EEEEEe
Confidence 478999999999999999988865 555 566665
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.16 E-value=0.088 Score=50.84 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=28.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
++|.|.||||.+|+.|++.|+++++.+..++.+.
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~ 34 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYA 34 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEee
Confidence 4799999999999999999997777776666543
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=94.15 E-value=0.06 Score=52.92 Aligned_cols=34 Identities=26% Similarity=0.369 Sum_probs=26.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLL 45 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~l 45 (492)
|+.++|.|.||||++|..|++.|.+. +.+ .|..+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~h-p~~-el~~l 50 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKH-PEF-EIHAL 50 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC-SSE-EEEEE
T ss_pred CCccEEEEECCCChHHHHHHHHHHcC-CCc-eEEEe
Confidence 56679999999999999999977663 544 55544
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=94.12 E-value=0.066 Score=50.91 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=31.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.|++|+|+||+|-+|..+++.+...|. +|++..|+..
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga---~Vi~~~~~~~ 161 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAASRPE 161 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 578999999999999999998887774 6788888644
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=94.06 E-value=0.05 Score=52.84 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=30.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|++|||+||+|-+|..+++.+...|. +|++..|+.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~---~V~~~~~~~ 190 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGC---YVVGSAGSK 190 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 578999999999999999998888884 568888753
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=93.91 E-value=0.31 Score=46.79 Aligned_cols=115 Identities=16% Similarity=0.014 Sum_probs=69.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
..++|.|+|+ |.+|..++..|+..|. +..|.++.+.... .+....++.....| + ...++. .
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~~~---~~g~a~DL~~~~~~-------~------~~~~i~-~ 80 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVMEDK---LKGEMMDLEHGSLF-------L------HTAKIV-S 80 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCHHH---HHHHHHHHHHHGGG-------S------CCSEEE-E
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCHHH---HHHHHHHhhhhhhc-------c------cCCeEE-E
Confidence 3579999998 9999999999998874 4567777663211 11111111111001 0 012221 1
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.+|+. . ++++|+||-+||..+-. +.-.+.+..|+.-.+.+.+.+.+. +...++.
T Consensus 81 t~d~~-------------~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~il 135 (330)
T 3ldh_A 81 GKDYS-------------V-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKE 135 (330)
T ss_dssp ESSSC-------------S-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred cCCHH-------------H-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEE
Confidence 23322 2 58999999999975432 333456888998889898888876 4444433
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=93.91 E-value=0.1 Score=50.93 Aligned_cols=35 Identities=29% Similarity=0.349 Sum_probs=28.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.++|.|.||||.+|+.+++.|++. +++ .|.++.|+
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~-p~~-ev~~i~~s 42 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADH-PMF-ELTALAAS 42 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC-SSE-EEEEEEEC
T ss_pred cceEEEECcCCHHHHHHHHHHhcC-CCC-EEEEEEcc
Confidence 368999999999999999998875 444 67777764
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=93.91 E-value=0.13 Score=50.39 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=29.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
|++|||+|| |-+|..+++.+...|. +|++..|+.
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGL---EVWMANRRE 214 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTC---EEEEEESSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCc
Confidence 899999999 9999999998888885 678888875
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=93.77 E-value=0.087 Score=51.44 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=26.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
..+|.|.||||++|..|++.|.+ -+.+ .+..+..
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~-el~~l~S 40 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYI-KPAYLAG 40 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSE-EEEEEEE
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCc-eEEEEEC
Confidence 56899999999999999996665 4655 5555543
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=93.77 E-value=0.087 Score=51.44 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=26.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
..+|.|.||||++|..|++.|.+ -+.+ .+..+..
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~-el~~l~S 40 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYI-KPAYLAG 40 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSE-EEEEEEE
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCc-eEEEEEC
Confidence 56899999999999999996665 4655 5555543
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=93.77 E-value=0.058 Score=52.85 Aligned_cols=35 Identities=20% Similarity=0.178 Sum_probs=30.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.|++|||+||+|.+|..+++.+...|. +|++..|+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga---~Vi~~~~~ 197 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKC---HVIGTCSS 197 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEECC
Confidence 578999999999999999998887775 57888875
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=93.61 E-value=0.047 Score=48.88 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=29.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
|+|+|+||+|++|+.++..|++.|+ +|++..|+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~---~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGH---EIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5799999999999999999999886 557777753
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=93.45 E-value=0.27 Score=47.41 Aligned_cols=118 Identities=14% Similarity=0.042 Sum_probs=68.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|.|+|| |.+|..++..|...|+ + .|.+..+++.. .+....++. +.+. ..+ ...++.. .
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~-~-~V~L~D~~~~~---~~~~~~~l~-----~~~~-~~~------~~~~i~~-t 69 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALREL-A-DVVLYDVVKGM---PEGKALDLS-----HVTS-VVD------TNVSVRA-E 69 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-C-EEEEECSSSSH---HHHHHHHHH-----HHHH-HTT------CCCCEEE-E
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEECChhH---HHHHHHHHH-----hhhh-ccC------CCCEEEE-e
Confidence 479999998 9999999999999886 2 46777776432 222110110 0000 000 0112221 1
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-ch-----hHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DE-----RYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~-----~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
. + .++.++++|+||-+++...- .. .-......|+.-.+.+.+.+.+. ....++.+.|
T Consensus 70 ~------------d-~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t 132 (331)
T 1pzg_A 70 Y------------S-YEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVT 132 (331)
T ss_dssp C------------S-HHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred C------------C-HHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEEc
Confidence 1 1 23466899999999975432 12 22344677888888888888776 3444554444
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=93.44 E-value=0.15 Score=42.74 Aligned_cols=34 Identities=26% Similarity=0.298 Sum_probs=30.3
Q ss_pred cHHhhcC-CCEEEEeCCc---chhhHHHHHHHHhhCCC
Q 037479 5 SVLEFLE-NKTILVTGAT---GFLAKIFVEKILRVQPN 38 (492)
Q Consensus 5 ~~~~~~~-~~~vlITGat---GflG~~l~~~Ll~~g~~ 38 (492)
.+..+++ .++|.|.|+| |-+|..+++.|++.|++
T Consensus 14 ~l~~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~~ 51 (144)
T 2d59_A 14 DIREILTRYKKIALVGASPKPERDANIVMKYLLEHGYD 51 (144)
T ss_dssp HHHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTCE
T ss_pred HHHHHHcCCCEEEEEccCCCCCchHHHHHHHHHHCCCE
Confidence 4778886 8999999998 89999999999998873
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=93.24 E-value=0.14 Score=49.74 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=30.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
+++|+|+||+|-+|...++.+...|. +|++..|+..
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga---~Vi~~~~~~~ 200 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGF---RPIVTVRRDE 200 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESCGG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 37999999999999999998888884 6788887654
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=93.22 E-value=0.71 Score=44.74 Aligned_cols=126 Identities=15% Similarity=0.121 Sum_probs=72.0
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH----HHh---hcChhhHHHHHhcCCchh
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH----NEI---IGKDLFRVLKEKNGTHLN 80 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~----~~~---~~~~~f~~l~~~~~~~~~ 80 (492)
+-+++.+|+|.|+ |-+|..+++.|.+.| |++|.++....-..+-..|-. +.+ .....-++|++-.|
T Consensus 32 ~~L~~~~VlivG~-GGlG~~ia~~La~~G--vg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp---- 104 (346)
T 1y8q_A 32 KRLRASRVLLVGL-KGLGAEIAKNLILAG--VKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNP---- 104 (346)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCT----
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCC----
Confidence 4467889999995 669999999999988 578888744322111111100 000 00011223333333
Q ss_pred hhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 81 ALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
.-++..+..+++. . ...++++.|+||.+... .. .-..+-++|.+. + ..||+.
T Consensus 105 ---~v~v~~~~~~~~~-------~--~~~~~~~~dvVv~~~d~------~~--------~r~~ln~~~~~~-~-ip~i~~ 156 (346)
T 1y8q_A 105 ---MVDVKVDTEDIEK-------K--PESFFTQFDAVCLTCCS------RD--------VIVKVDQICHKN-S-IKFFTG 156 (346)
T ss_dssp ---TSEEEEECSCGGG-------C--CHHHHTTCSEEEEESCC------HH--------HHHHHHHHHHHT-T-CEEEEE
T ss_pred ---CeEEEEEecccCc-------c--hHHHhcCCCEEEEcCCC------HH--------HHHHHHHHHHHc-C-CCEEEE
Confidence 1456667666652 1 13566899999987431 11 223356677775 4 468888
Q ss_pred eeceeecc
Q 037479 161 STAFVWGE 168 (492)
Q Consensus 161 ST~~v~~~ 168 (492)
++.+.+|.
T Consensus 157 ~~~G~~G~ 164 (346)
T 1y8q_A 157 DVFGYHGY 164 (346)
T ss_dssp EEEBTEEE
T ss_pred eecccEEE
Confidence 77666654
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=93.13 E-value=0.25 Score=47.05 Aligned_cols=113 Identities=16% Similarity=0.087 Sum_probs=62.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+|| |.+|..++..|...|+ +..|.+..+++ ++++.... .+....+ +. ..+.+..+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~------~~~~~~~~------~l~~~~~-----~~-~~~~i~~~ 60 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDE------DRAQAEAE------DIAHAAP-----VS-HGTRVWHG 60 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSH------HHHHHHHH------HHTTSCC-----TT-SCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCH------HHHHHHHH------hhhhhhh-----hc-CCeEEEEC
Confidence 58999998 9999999999998875 34678887753 22211000 0000000 00 11111111
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccC-cchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTN-FDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
+ . ..++++|+||-+++... ......+.+..|+...+.+++.+.+. ....+|.+
T Consensus 61 ----------~---~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 61 ----------G---H-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp ----------C---G-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred ----------C---H-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 2 34689999999997543 22233455778888888888888876 34444433
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=92.69 E-value=0.28 Score=46.95 Aligned_cols=115 Identities=16% Similarity=0.171 Sum_probs=67.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|.|+|| |.+|..++..|+..+. +..|++..+++. +++... .++-+ ..+ .....+.+..
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~~------~~~~~~--~dl~~----~~~-----~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANES------KAIGDA--MDFNH----GKV-----FAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH------HHHHHH--HHHHH----HTT-----SSSSCCEEEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCcc------hHHHHH--hhHHH----Hhh-----hcCCCeEEEc
Confidence 479999998 9999999999988764 467888877532 221100 01111 000 0111233322
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
+ + . ..++++|+||-+|+...-. ....+.+..|..-.+.+.+.+.+. ....++.+
T Consensus 67 ~----------~---~-~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv 121 (316)
T 1ldn_A 67 G----------D---Y-DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLV 121 (316)
T ss_dssp C----------C---G-GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEE
T ss_pred C----------c---H-HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEE
Confidence 1 1 1 3458999999999865422 122344677888888888888775 33443333
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=92.63 E-value=0.089 Score=50.00 Aligned_cols=37 Identities=30% Similarity=0.345 Sum_probs=31.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+++++|+|+|+ |-+|+.++..|++.|. .+|++..|+.
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~~ 175 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRTV 175 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSSH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 46899999997 7799999999999875 4778888863
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=92.54 E-value=0.081 Score=51.20 Aligned_cols=71 Identities=13% Similarity=0.027 Sum_probs=49.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|+|.|+ |-+|+.+++.|.+.|. |.++.+++.. .+ +. ..++.++.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~----v~vid~~~~~---~~-~~------------------------~~~~~~i~ 161 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV----FVLAEDENVR---KK-VL------------------------RSGANFVH 161 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE----EEEESCGGGH---HH-HH------------------------HTTCEEEE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc----EEEEeCChhh---hh-HH------------------------hCCcEEEE
Confidence 458999996 9999999999998874 3555554321 11 21 15678999
Q ss_pred cCCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 92 GDITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
||.+ +++.++++ ++++|.|+-+.+
T Consensus 162 gd~~-------~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 162 GDPT-------RVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp SCTT-------SHHHHHHTCSTTEEEEEECCS
T ss_pred eCCC-------CHHHHHhcChhhccEEEEcCC
Confidence 9999 55555455 678999997653
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=92.44 E-value=0.038 Score=46.26 Aligned_cols=35 Identities=26% Similarity=0.239 Sum_probs=29.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.+++|+|.|+ |.+|+.++..|.+.|. . |++..|+.
T Consensus 20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~--~-v~v~~r~~ 54 (144)
T 3oj0_A 20 GGNKILLVGN-GMLASEIAPYFSYPQY--K-VTVAGRNI 54 (144)
T ss_dssp CCCEEEEECC-SHHHHHHGGGCCTTTC--E-EEEEESCH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCC--E-EEEEcCCH
Confidence 4899999995 9999999999988764 3 67887753
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=92.41 E-value=0.19 Score=49.20 Aligned_cols=36 Identities=6% Similarity=0.185 Sum_probs=30.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.++++|+|+|+ |-+|..++..+...|. +|++..|+.
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga---~V~v~dr~~ 200 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGA---QVQIFDINV 200 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 45689999998 9999999999998885 678888864
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=92.40 E-value=1.1 Score=42.89 Aligned_cols=105 Identities=16% Similarity=0.071 Sum_probs=63.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+|| |.+|..++..|++.|+ +..|.+..|++.. .+.+..++ ....+ . .....+...
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~~~---~~~~~~~l---------~~~~~-----~-~~~~~i~~~ 60 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKR---AEGDALDL---------IHGTP-----F-TRRANIYAG 60 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHH---------HHHGG-----G-SCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHH---HHHHHHHH---------Hhhhh-----h-cCCcEEEeC
Confidence 58999998 9999999999999986 4467888775321 11111000 00000 0 011111111
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+ . ..++++|+||-+++..... ..-.+....|+.-.+.+++.+.+.
T Consensus 61 ----------d---~-~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (319)
T 1a5z_A 61 ----------D---Y-ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY 106 (319)
T ss_dssp ----------C---G-GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------C---H-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1 3357899999999865422 123456778888888888888775
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=92.38 E-value=0.14 Score=42.64 Aligned_cols=42 Identities=21% Similarity=0.165 Sum_probs=34.2
Q ss_pred CCcccHHhhc-CCCEEEEeCCc---chhhHHHHHHHHhhCCCCCeEEEE
Q 037479 1 MELGSVLEFL-ENKTILVTGAT---GFLAKIFVEKILRVQPNVKKLYLL 45 (492)
Q Consensus 1 ~~~~~~~~~~-~~~~vlITGat---GflG~~l~~~Ll~~g~~V~~i~~l 45 (492)
|+...+..++ +.++|.|.|+| |-+|..+++.|++.|++ ||..
T Consensus 1 m~~~~l~~ll~~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~---v~~v 46 (140)
T 1iuk_A 1 MNDQELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYR---VLPV 46 (140)
T ss_dssp CCHHHHHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCE---EEEE
T ss_pred CCHHHHHHHHcCCCEEEEECCCCCCCChHHHHHHHHHHCCCE---EEEe
Confidence 3334588889 78999999999 88999999999999973 4554
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=92.18 E-value=0.29 Score=45.76 Aligned_cols=29 Identities=21% Similarity=0.417 Sum_probs=26.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPN 38 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~ 38 (492)
++|++++|.|++|.+|+.++..|++.|..
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAt 186 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGAT 186 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe
Confidence 57999999999999999999999998853
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=92.14 E-value=0.078 Score=51.45 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=26.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
..+|.|.||||++|..|++.|.+. |.+ .|..+.
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-P~~-el~~l~ 45 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-PEA-KITYLS 45 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-TTE-EEEEEE
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEe
Confidence 358999999999999999999875 555 555554
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=91.97 E-value=1.6 Score=41.45 Aligned_cols=107 Identities=20% Similarity=0.043 Sum_probs=63.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+|| |.+|..++..|.+.+. ...|.+..|++.. .+.+..++... .. ... ...++.. ..
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~-g~~V~l~D~~~~~---~~~~~~~l~~~-~~-----~~~------~~~~i~~-t~ 62 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGI---PQGKALDMYES-GP-----VGL------FDTKVTG-SN 62 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSH---HHHHHHHHHTT-HH-----HHT------CCCEEEE-ES
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhH---HHHHHHhHHhh-hh-----ccc------CCcEEEE-CC
Confidence 58999998 9999999999987532 2467888886432 22211111111 00 000 0011111 11
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
| .+. ++++|+||-+++.... .....+.+..|+.-.+.+.+.+++.
T Consensus 63 d-------------~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 108 (310)
T 1guz_A 63 D-------------YAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH 108 (310)
T ss_dssp C-------------GGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-------------HHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 113 5899999999985432 2334567788988888888888776
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=91.91 E-value=0.85 Score=42.78 Aligned_cols=37 Identities=24% Similarity=0.388 Sum_probs=27.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
..+|.|.||+|-+|+.+++.+.+. +++.-+-++.|+.
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKG 57 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence 358999999999999999988864 5554344445543
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=91.85 E-value=2.1 Score=40.49 Aligned_cols=102 Identities=18% Similarity=0.073 Sum_probs=63.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|.|+|| |.+|..++..|+..|. +..|.+..+.+....... ++.. . ...++.. .
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~~~g~a~----dl~~----------~-------~~~~i~~-t 69 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEGTKGATM----DLEI----------F-------NLPNVEI-S 69 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC-----CHH----HHHH----------H-------TCTTEEE-E
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcchHHHHH----HHhh----------h-------cCCCeEE-e
Confidence 478999996 9999999999999885 457788877653111111 1110 0 0123333 1
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+| . ..++++|+||-+|+.......-.+....|..-.+.+++.+.+.
T Consensus 70 ~d-------------~-~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~ 115 (303)
T 2i6t_A 70 KD-------------L-SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY 115 (303)
T ss_dssp SC-------------G-GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-------------H-HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 2 3358999999999874322334556778888888888888775
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=91.85 E-value=0.21 Score=48.32 Aligned_cols=34 Identities=15% Similarity=0.363 Sum_probs=28.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.|.+|||+||+|-+|...++.+...|. +|++. ++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga---~Vi~~-~~ 183 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGA---RVFAT-AR 183 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEE-EC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEE-eC
Confidence 478999999999999999998888885 56776 43
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=91.72 E-value=0.32 Score=47.43 Aligned_cols=37 Identities=14% Similarity=0.186 Sum_probs=30.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
.|.+|||+|| |-+|...+..+...|. +|+++.|++..
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga---~Vi~~~~~~~~ 215 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGA---ETYVISRSSRK 215 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEcCCHHH
Confidence 5789999999 9999999887777775 57888887654
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=91.66 E-value=0.15 Score=49.46 Aligned_cols=36 Identities=17% Similarity=0.156 Sum_probs=30.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|.+|||+||+|-+|...++.+...|. +|++..++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga---~Vi~~~~~~ 185 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL---RVITTASRN 185 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECCSH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 689999999999999999988887774 678887753
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=91.36 E-value=0.17 Score=47.52 Aligned_cols=38 Identities=24% Similarity=0.342 Sum_probs=31.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
+++++++|+|+ |-+|+.++..|.+.|. ++|++..|+..
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~~ 152 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVR--PTLTVANRTMS 152 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCC--SCCEEECSCGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCHH
Confidence 46899999996 8899999999999886 35578888753
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=91.16 E-value=0.11 Score=50.59 Aligned_cols=36 Identities=19% Similarity=0.198 Sum_probs=29.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|.+|||+|| |-+|..+++.+...|. ++|+++.|++
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~ 202 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGA--YPVIVSEPSD 202 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 6889999999 9999999998877775 2568887753
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=91.13 E-value=0.13 Score=51.89 Aligned_cols=36 Identities=14% Similarity=0.139 Sum_probs=29.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
-.|++|||+||+|-+|...+..+...|. +|++.+++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga---~vi~~~~~ 254 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGG---IPVAVVSS 254 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCC
Confidence 3578999999999999999988888784 55777764
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=91.11 E-value=0.34 Score=47.19 Aligned_cols=35 Identities=23% Similarity=0.166 Sum_probs=27.6
Q ss_pred CEEEEeCCcchhhHHH-HHHH-HhhCCCCCeEEEEEecCC
Q 037479 13 KTILVTGATGFLAKIF-VEKI-LRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 13 ~~vlITGatGflG~~l-~~~L-l~~g~~V~~i~~lvR~~~ 50 (492)
.+|||+|| |-+|... +..+ ...|. ++|+++.+++.
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga--~~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGY--ENLYCLGRRDR 210 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCC--CEEEEEECCCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCC--cEEEEEeCCcc
Confidence 89999999 9999998 7766 55564 34789888754
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=91.08 E-value=0.18 Score=48.35 Aligned_cols=36 Identities=6% Similarity=0.116 Sum_probs=29.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
-.|.+|+|+||+|-+|...+..+...|. +|++.+++
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga---~vi~~~~~ 186 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGT---TVITTASK 186 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEECH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCC---EEEEEecc
Confidence 3578999999999999999998887775 56777654
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.02 E-value=0.35 Score=47.42 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=28.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
.|.+|||+||+|-+|...++.+...|. +|++..+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga---~Vi~~~~ 216 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDA---HVTAVCS 216 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeC
Confidence 578999999999999999988877774 5677664
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=91.02 E-value=0.18 Score=48.75 Aligned_cols=36 Identities=11% Similarity=0.052 Sum_probs=29.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.|++|||+|| |-+|..+++.+...|. +|+++.|+.
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga---~Vi~~~~~~ 198 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGL---NVVAVDIGD 198 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 35789999999 6699999998887774 678888753
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=90.83 E-value=0.47 Score=44.28 Aligned_cols=29 Identities=21% Similarity=0.311 Sum_probs=26.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPN 38 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~ 38 (492)
++|++++|.|++|.+|+.++..|++.|..
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt 187 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKAT 187 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCe
Confidence 57999999999999999999999998853
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=90.81 E-value=0.95 Score=37.40 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=27.9
Q ss_pred hhcCCCEEEEeCCc---chhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 8 EFLENKTILVTGAT---GFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 8 ~~~~~~~vlITGat---GflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
.+++.++|.|.|+| |-+|..+++.|++.|++ |+...+
T Consensus 10 ~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~---V~~vnp 49 (138)
T 1y81_A 10 NSKEFRKIALVGASKNPAKYGNIILKDLLSKGFE---VLPVNP 49 (138)
T ss_dssp ----CCEEEEETCCSCTTSHHHHHHHHHHHTTCE---EEEECT
T ss_pred cccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCE---EEEeCC
Confidence 56778999999997 89999999999999873 555443
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=90.73 E-value=0.43 Score=43.71 Aligned_cols=25 Identities=16% Similarity=0.143 Sum_probs=22.1
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQP 37 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~ 37 (492)
.++|.|+|+ |.+|+.+++.+.+.+.
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~ 27 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGH 27 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCC
Confidence 479999999 9999999999988653
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=90.65 E-value=1.2 Score=42.40 Aligned_cols=104 Identities=14% Similarity=0.071 Sum_probs=63.9
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe-c
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP-G 92 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~-g 92 (492)
+|.|+|| |.+|..++..|+..+. ..|.++.+.+... +....++.....+ ....+.+.. +
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l--~el~L~Di~~~~~---~g~~~dl~~~~~~--------------~~~~~~i~~t~ 60 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGY--DDLLLIARTPGKP---QGEALDLAHAAAE--------------LGVDIRISGSN 60 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSSTTHH---HHHHHHHHHHHHH--------------HTCCCCEEEES
T ss_pred CEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCChhhH---HHHHHHHHHhhhh--------------cCCCeEEEECC
Confidence 5889998 9999999999988765 4578887764221 1111111110000 011222221 2
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
| . ..++++|+||-+|+...- ...-.+....|+.-.+.+++.+.+.
T Consensus 61 d-------------~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~ 106 (308)
T 2d4a_B 61 S-------------Y-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY 106 (308)
T ss_dssp C-------------G-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-------------H-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2 346899999999986542 2334566888999999999888875
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=90.56 E-value=0.32 Score=49.16 Aligned_cols=36 Identities=17% Similarity=0.178 Sum_probs=29.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
-.|.+|+|+||+|-+|...+..+...|. ++++++++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga---~vi~~~~~ 262 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGA---NPICVVSS 262 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---eEEEEECC
Confidence 3578999999999999999988887774 55777764
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=90.53 E-value=0.49 Score=44.19 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=26.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++|++++|.|++|.+|+.++..|++.|..|
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtV 188 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCTV 188 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeE
Confidence 579999999999999999999999988533
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=90.30 E-value=0.36 Score=47.23 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=29.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|.+|||+|+ |-+|..+++.+...|. +|++..|+.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~ 221 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGS---KVTVISTSP 221 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 6789999996 9999999998877774 668888764
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=90.09 E-value=0.73 Score=47.69 Aligned_cols=105 Identities=17% Similarity=0.141 Sum_probs=59.0
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH----HHh---hcChhhHHHHHhcCCchh
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH----NEI---IGKDLFRVLKEKNGTHLN 80 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~----~~~---~~~~~f~~l~~~~~~~~~ 80 (492)
+-+++++|+|.| .|-+|..+++.|.+.| |++|.++....-..+-..|-. +.+ .....-++|++-.|
T Consensus 323 ~kL~~~kVLIVG-aGGLGs~va~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP---- 395 (598)
T 3vh1_A 323 DIIKNTKVLLLG-AGTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP---- 395 (598)
T ss_dssp HHHHTCEEEEEC-CSHHHHHHHHHHHTTT--CCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCT----
T ss_pred HHHhCCeEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCC----
Confidence 446678999999 5669999999999887 588888855432222111100 000 00011223333332
Q ss_pred hhccCceEEEecCCCCCCCCCC-------chhhHHHhccCccEEEEccc
Q 037479 81 ALISEKITLVPGDITREDLGVK-------DSNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgl~-------~~~~~~~~~~~vd~Vih~Aa 122 (492)
.-+++.+..++..++..++ +.+....++++.|+||.|..
T Consensus 396 ---~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD 441 (598)
T 3vh1_A 396 ---LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD 441 (598)
T ss_dssp ---TCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred ---CcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCC
Confidence 1356666666644332221 12333467789999999864
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=90.07 E-value=0.72 Score=44.33 Aligned_cols=104 Identities=19% Similarity=0.147 Sum_probs=59.4
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCchhh
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTHLNA 81 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~~~~ 81 (492)
-+++++|+|.| .|-+|+.+++.|.+.| |++|.++.+..-..+-..|-. .+-...+ .-+++++-.|
T Consensus 31 kL~~~~VlIvG-aGGlGs~va~~La~aG--Vg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP----- 102 (340)
T 3rui_A 31 IIKNTKVLLLG-AGTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP----- 102 (340)
T ss_dssp HHHTCEEEEEC-CSHHHHHHHHHHHHTT--CCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCT-----
T ss_pred HHhCCEEEEEC-CCHHHHHHHHHHHHcC--CCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCC-----
Confidence 45789999999 5779999999999977 588888877653322222200 0000011 1223333333
Q ss_pred hccCceEEEecCCCCCCCCCCc-------hhhHHHhccCccEEEEccc
Q 037479 82 LISEKITLVPGDITREDLGVKD-------SNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgl~~-------~~~~~~~~~~vd~Vih~Aa 122 (492)
.-+++.+..++..+..-+++ .+....++++.|+||.|.-
T Consensus 103 --~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD 148 (340)
T 3rui_A 103 --LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD 148 (340)
T ss_dssp --TCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred --CCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC
Confidence 13455666655433322211 2223467789999999864
|
| >1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* | Back alignment and structure |
|---|
Probab=89.95 E-value=1.7 Score=43.42 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=57.0
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH----HHhh---cChhhHHHHHhcCCchh
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH----NEII---GKDLFRVLKEKNGTHLN 80 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~----~~~~---~~~~f~~l~~~~~~~~~ 80 (492)
..+++.+|+|.|+ |-+|..+++.|.+.| |++|.++....-..+-..|-. +.+- ....-+++++-.|
T Consensus 36 ~~L~~~~VlvvG~-GGlGs~va~~La~aG--vg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp---- 108 (434)
T 1tt5_B 36 FLLDTCKVLVIGA-GGLGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP---- 108 (434)
T ss_dssp HHHHTCCEEEECS-STHHHHHHHHHHHTT--CCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHST----
T ss_pred HHhcCCEEEEECc-CHHHHHHHHHHHHcC--CCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCC----
Confidence 3447889999996 669999999999987 578888865443222222200 0000 0011223333333
Q ss_pred hhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEccc
Q 037479 81 ALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa 122 (492)
.-+++.+..++. +.+ ..++++.|+||.+..
T Consensus 109 ---~v~v~~~~~~i~-------~~~--~~~~~~~DlVi~~~D 138 (434)
T 1tt5_B 109 ---NCNVVPHFNKIQ-------DFN--DTFYRQFHIIVCGLD 138 (434)
T ss_dssp ---TCCCEEEESCGG-------GBC--HHHHTTCSEEEECCS
T ss_pred ---CCEEEEEecccc-------hhh--HHHhcCCCEEEECCC
Confidence 145677777766 222 256789999998853
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=89.77 E-value=1.7 Score=41.19 Aligned_cols=106 Identities=12% Similarity=0.069 Sum_probs=60.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|.| +|.+|..++..|++.|. ...|.+..|+... .+.+..++ .... ......+.....
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~~~~---~~~~~~~l---------~~~~-----~~~~~~~~~~~~ 62 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDANEAK---VKADQIDF---------QDAM-----ANLEAHGNIVIN 62 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHH---------HHHG-----GGSSSCCEEEES
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCCHHH---HHHHHHHH---------Hhhh-----hhcCCCeEEEeC
Confidence 6899999 89999999999999884 3467888775321 11211111 0000 000112222222
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccC-----cchhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTN-----FDERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~-----~~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
| . ..++++|+||-+++... ....-.+....|+.-.+.+++.+++.
T Consensus 63 d-------------~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~ 112 (309)
T 1hyh_A 63 D-------------W-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES 112 (309)
T ss_dssp C-------------G-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred C-------------H-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2 33478999999987543 11112234567777777888877765
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=89.77 E-value=0.32 Score=46.64 Aligned_cols=35 Identities=26% Similarity=0.236 Sum_probs=29.1
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
+|||+||+|-+|...++.+...|. +|++..++...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga---~vi~~~~~~~~ 186 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGY---TVEASTGKAAE 186 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCTTC
T ss_pred eEEEecCCCHHHHHHHHHHHHCCC---EEEEEECCHHH
Confidence 899999999999999988877775 46888887543
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=89.62 E-value=1.1 Score=42.52 Aligned_cols=115 Identities=13% Similarity=0.118 Sum_probs=65.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|.|.|| |.+|..++..|.+.|+ +..|.++.|++. ++...... +....+ ......+..
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~-~~~V~l~d~~~~------~~~~~~~~------~~~~~~------~~~~~~v~~ 66 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKE------RVEAEVLD------MQHGSS------FYPTVSIDG 66 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHH------HHHHHHHH------HHHTGG------GSTTCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChh------HHHHHHHH------HHhhhh------hcCCeEEEe
Confidence 479999997 9999999999999885 236678777531 11100000 000000 001111111
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
. + + . ..++++|+||-+++...- .....+....|....+.+++..++. ....+|.+
T Consensus 67 ~--~-------~---~-~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~ 122 (319)
T 1lld_A 67 S--D-------D---P-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 122 (319)
T ss_dssp E--S-------C---G-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred C--C-------C---H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 1 0 1 1 335789999999875432 2334556778888888888877765 33334433
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=89.56 E-value=0.54 Score=43.66 Aligned_cols=30 Identities=10% Similarity=0.179 Sum_probs=27.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++|++++|.|++|.+|+.++..|++.|..|
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtV 177 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTV 177 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeE
Confidence 789999999999999999999999988543
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=89.47 E-value=0.6 Score=43.93 Aligned_cols=29 Identities=10% Similarity=0.272 Sum_probs=26.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPN 38 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~ 38 (492)
++|++++|.|++|.+|+.++..|++.|..
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt 191 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENAT 191 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe
Confidence 57999999999999999999999998853
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=89.42 E-value=0.4 Score=46.76 Aligned_cols=37 Identities=16% Similarity=0.063 Sum_probs=28.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.|.+|||+|| |-+|...++.+...|. ++|++..+++
T Consensus 178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 214 (363)
T 3m6i_A 178 RLGDPVLICGA-GPIGLITMLCAKAAGA--CPLVITDIDE 214 (363)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 35789999998 9999999987777775 3467776654
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=89.38 E-value=0.33 Score=48.20 Aligned_cols=37 Identities=27% Similarity=0.417 Sum_probs=31.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
..|++|+|.|+ |-+|+.++..|...|. .+|++..|+.
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~--~~V~v~~r~~ 201 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY 201 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 57899999997 9999999999998885 5778888763
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=89.36 E-value=0.24 Score=47.65 Aligned_cols=35 Identities=29% Similarity=0.275 Sum_probs=29.5
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
+|||+||+|-+|...+..+...|. +|+++.|++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga---~vi~~~~~~~~ 187 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGY---DVVASTGNREA 187 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTC---CEEEEESSSST
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH
Confidence 899999999999999998888885 46888887543
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=89.35 E-value=0.31 Score=40.79 Aligned_cols=45 Identities=16% Similarity=0.163 Sum_probs=36.6
Q ss_pred CCcccHHhhcC-CCEEEEeCCc---chhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 1 MELGSVLEFLE-NKTILVTGAT---GFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 1 ~~~~~~~~~~~-~~~vlITGat---GflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
|+...+..++. .++|.|.|+| |-+|..++..|++.|++ |+...+.
T Consensus 1 m~~~~l~~ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G~~---v~~vnp~ 49 (145)
T 2duw_A 1 MKENDIAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYH---VIPVSPK 49 (145)
T ss_dssp CCCCSHHHHHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTCC---EEEECSS
T ss_pred CCHHHHHHHHhCCCEEEEECcCCCCCChHHHHHHHHHHCCCE---EEEeCCc
Confidence 45556888886 8999999998 88999999999999974 4665443
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=89.34 E-value=0.21 Score=50.59 Aligned_cols=73 Identities=14% Similarity=0.332 Sum_probs=49.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+.|+|+|.| .|-+|++|++.|.+.|++| .++.+.+. ..+++. .+ -.+..+
T Consensus 2 ~~M~iiI~G-~G~vG~~la~~L~~~~~~v---~vId~d~~---~~~~~~-------------~~----------~~~~~i 51 (461)
T 4g65_A 2 NAMKIIILG-AGQVGGTLAENLVGENNDI---TIVDKDGD---RLRELQ-------------DK----------YDLRVV 51 (461)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHTCSTTEEE---EEEESCHH---HHHHHH-------------HH----------SSCEEE
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHHCCCCE---EEEECCHH---HHHHHH-------------Hh----------cCcEEE
Confidence 468999999 5899999999999988754 55544321 122222 11 357889
Q ss_pred ecCCCCCCCCCCchhhHHHh-ccCccEEEEc
Q 037479 91 PGDITREDLGVKDSNLREEM-WNKLDVVINL 120 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~-~~~vd~Vih~ 120 (492)
.||-+ +++.++++ ++++|++|-+
T Consensus 52 ~Gd~~-------~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 52 NGHAS-------HPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp ESCTT-------CHHHHHHHTTTTCSEEEEC
T ss_pred EEcCC-------CHHHHHhcCCCcCCEEEEE
Confidence 99999 55545333 5689998843
|
| >1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A* | Back alignment and structure |
|---|
Probab=89.33 E-value=0.71 Score=47.47 Aligned_cols=125 Identities=13% Similarity=0.125 Sum_probs=70.2
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhh------cCh----hhHHHHHhcCC
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEII------GKD----LFRVLKEKNGT 77 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~------~~~----~f~~l~~~~~~ 77 (492)
+-+++.+|+|.|+ |-+|..+++.|.+.| |++|.++....-..+-..| .++ +.. .-.+|++-.|.
T Consensus 28 ~~L~~~~VlvvG~-GGlGseiak~La~aG--Vg~itlvD~D~Ve~sNL~R---Q~l~~~~dvG~~Ka~~a~~~l~~lNp~ 101 (531)
T 1tt5_A 28 EALESAHVCLINA-TATGTEILKNLVLPG--IGSFTIIDGNQVSGEDAGN---NFFLQRSSIGKNRAEAAMEFLQELNSD 101 (531)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHTTT--CSEEEEECCCBBCHHHHHH---CTTCCGGGBTSBHHHHHHHHHHTTCTT
T ss_pred HHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCCEechhhccc---CccCChhhcCcHHHHHHHHHHHHhCCC
Confidence 3356789999996 669999999999987 5888877654332222222 111 001 11233333221
Q ss_pred chhhhccCceEEEecCCCCCCCCCCch-hhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhccccee
Q 037479 78 HLNALISEKITLVPGDITREDLGVKDS-NLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIV 156 (492)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgl~~~-~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~ 156 (492)
-++..+..+++ .. +....++++.|+||.|.. +.. .-..+.++|.+. + ..
T Consensus 102 -------v~v~~~~~~~~-------~~~~~~~~~~~~~DvVi~~~d------~~~--------~r~~ln~~c~~~-~-ip 151 (531)
T 1tt5_A 102 -------VSGSFVEESPE-------NLLDNDPSFFCRFTVVVATQL------PES--------TSLRLADVLWNS-Q-IP 151 (531)
T ss_dssp -------SBCCEESSCHH-------HHHHSCGGGGGGCSEEEEESC------CHH--------HHHHHHHHHHHT-T-CC
T ss_pred -------CeEEEeCCCcc-------hhhhhhHHHhcCCCEEEEeCC------CHH--------HHHHHHHHHHHc-C-CC
Confidence 33445554443 10 111255678999998842 112 122345677775 4 46
Q ss_pred EEEeeeceeecc
Q 037479 157 LVHVSTAFVWGE 168 (492)
Q Consensus 157 ~V~vST~~v~~~ 168 (492)
||+.++.+..|.
T Consensus 152 lI~~~~~G~~G~ 163 (531)
T 1tt5_A 152 LLICRTYGLVGY 163 (531)
T ss_dssp EEEEEEETTEEE
T ss_pred EEEEEecCCeEE
Confidence 888887666654
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=89.30 E-value=0.4 Score=46.92 Aligned_cols=36 Identities=14% Similarity=0.151 Sum_probs=28.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.|.+|||+|+ |-+|...++.+...|. +|+++.+++.
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga---~Vi~~~~~~~ 229 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGA---HVVAFTTSEA 229 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 5789999998 7799999887776774 5788887654
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=88.99 E-value=0.24 Score=42.04 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=43.1
Q ss_pred cchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCH----HHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecCCCC
Q 037479 21 TGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSA----TVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGDITR 96 (492)
Q Consensus 21 tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~----~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gDl~~ 96 (492)
+|.++...++.|.+.|.+| .+..|+...... .+.+. + ...+...+.+|+++
T Consensus 25 s~~p~~a~a~~La~~Ga~v---vi~~r~~~e~~~~~~~~~~~~--------------~--------~G~~~~~i~~Dv~~ 79 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDV---VINLMPDSSKDAHPDEGKLVT--------------Q--------AGMDYVYIPVDWQN 79 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCE---EEECSCTTSTTSCTTHHHHHH--------------H--------TTCEEEECCCCTTS
T ss_pred cCCCCHHHHHHHHHcCCCE---EEECCCcccccccccHHHHHH--------------H--------cCCeEEEecCCCCC
Confidence 4678899999999999644 555565433211 11111 1 12456778899986
Q ss_pred CCCCCCchhhHHHh-------ccCccEEEEccccc
Q 037479 97 EDLGVKDSNLREEM-------WNKLDVVINLAATT 124 (492)
Q Consensus 97 ~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~ 124 (492)
+. . +..+.+ ..+ |++|||||..
T Consensus 80 ~~----~-~~v~~~~~~i~~~~G~-dVLVnnAgg~ 108 (157)
T 3gxh_A 80 PK----V-EDVEAFFAAMDQHKGK-DVLVHCLANY 108 (157)
T ss_dssp CC----H-HHHHHHHHHHHHTTTS-CEEEECSBSH
T ss_pred CC----H-HHHHHHHHHHHhcCCC-CEEEECCCCC
Confidence 41 1 222222 235 9999999853
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=88.61 E-value=0.49 Score=46.49 Aligned_cols=36 Identities=17% Similarity=0.096 Sum_probs=30.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+.+++|+|+|+ |-+|..+++.+...|. +|++..|+.
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga---~V~~~d~~~ 201 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGA---TVTVLDINI 201 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 56899999998 9999999999998885 567877753
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=88.49 E-value=0.3 Score=49.28 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=28.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
|+|.|.| +|.+|..++..|.+.|++ |++..|++
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G~~---V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELGAN---VRCIDTDR 35 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcCCE---EEEEECCH
Confidence 6899998 699999999999999964 57777753
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=88.24 E-value=0.38 Score=47.09 Aligned_cols=37 Identities=19% Similarity=0.238 Sum_probs=28.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.|.+|||+|| |-+|...+..+...|. .+|++..+++
T Consensus 181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 217 (370)
T 4ej6_A 181 KAGSTVAILGG-GVIGLLTVQLARLAGA--TTVILSTRQA 217 (370)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 35789999998 9999998887777775 3667766653
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=88.16 E-value=1.3 Score=41.88 Aligned_cols=38 Identities=26% Similarity=0.399 Sum_probs=26.3
Q ss_pred CCcccHHhhcCCCE-EEEeCCcchhhHHHHHHHHhhCCC
Q 037479 1 MELGSVLEFLENKT-ILVTGATGFLAKIFVEKILRVQPN 38 (492)
Q Consensus 1 ~~~~~~~~~~~~~~-vlITGatGflG~~l~~~Ll~~g~~ 38 (492)
|.++.+..+++.++ ++|.|+||-.|+.+++.|++.|++
T Consensus 1 ~~~~~l~~l~~~~~~v~V~Gasg~~G~~~~~~l~~~g~~ 39 (294)
T 2yv1_A 1 MVLRDKMILLDENTKAIVQGITGRQGSFHTKKMLECGTK 39 (294)
T ss_dssp ------CCSSCTTCCEEEETTTSHHHHHHHHHHHHTTCC
T ss_pred CChhHHHHHhCCCCEEEEECCCCCHHHHHHHHHHhCCCe
Confidence 34445666776654 777799999999999999987764
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=88.09 E-value=0.46 Score=44.33 Aligned_cols=36 Identities=19% Similarity=0.198 Sum_probs=30.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+++++++|+|+ |-+|+.++..|++.|. +|++..|+.
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~---~V~v~~R~~ 152 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDC---AVTITNRTV 152 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCC---EEEEEECCH
Confidence 46899999998 6799999999999983 668877763
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=87.88 E-value=0.98 Score=44.12 Aligned_cols=34 Identities=12% Similarity=-0.031 Sum_probs=28.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
-.|.+|||+||+|-+|...+..+...|. +|++.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga---~Vi~~~ 196 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY---IPIATC 196 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC---EEEEEe
Confidence 3578999999999999999988877775 556665
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=87.69 E-value=0.69 Score=42.37 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=25.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
++|.|.||+|-+|+.+++.+.+. ++. .+...+..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~~-elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DDL-TLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TTC-EEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEEcc
Confidence 48999999999999999998764 232 44555543
|
| >3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.65 E-value=2.1 Score=47.43 Aligned_cols=136 Identities=15% Similarity=0.128 Sum_probs=75.4
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCC---CeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcC
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNV---KKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNG 76 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V---~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~ 76 (492)
++-+++.+|+|.|+ |-||..+++.|.+.|-.. ++|.++....-..+-..|-. .+=.+.+ .-+++++-.|
T Consensus 420 q~kL~~~~VlvVGa-GGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG~~Ka~~aa~~l~~iNP 498 (1015)
T 3cmm_A 420 QKKIANSKVFLVGS-GAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAEAVCAMNP 498 (1015)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCG
T ss_pred HHHHhcCeEEEEec-CHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhhCCCHHHHHHHHHHHHHCC
Confidence 45577899999996 779999999999987310 67787765543332222210 0000000 1122333222
Q ss_pred CchhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhccccee
Q 037479 77 THLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIV 156 (492)
Q Consensus 77 ~~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~ 156 (492)
.+..+++.+...++..+..+ .-..++++.|+||.+.... ..-..+-+.|... + +.
T Consensus 499 -----~v~~~v~~~~~~i~~~~~~~----~~~~~~~~~D~Vi~a~Dn~--------------~aR~~ln~~c~~~-~-~P 553 (1015)
T 3cmm_A 499 -----DLKGKINAKIDKVGPETEEI----FNDSFWESLDFVTNALDNV--------------DARTYVDRRCVFY-R-KP 553 (1015)
T ss_dssp -----GGTTTEEEECCCCSGGGTTT----SCHHHHHHCSEEEECCSSH--------------HHHHHHHHHHHHH-T-CC
T ss_pred -----CCcceEEEEecccCchhhhh----ccHhhhccCCEEEECCCCH--------------HHHHHHHHHHHHc-C-Cc
Confidence 12237888888887422100 0125567899999976421 1222344566665 3 45
Q ss_pred EEEeeeceeecc
Q 037479 157 LVHVSTAFVWGE 168 (492)
Q Consensus 157 ~V~vST~~v~~~ 168 (492)
+|+.++.+..|.
T Consensus 554 li~~g~~G~~G~ 565 (1015)
T 3cmm_A 554 LLESGTLGTKGN 565 (1015)
T ss_dssp EEEEEEETTEEE
T ss_pred EEEeCCCccccc
Confidence 888777655543
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=87.51 E-value=0.74 Score=44.53 Aligned_cols=37 Identities=16% Similarity=0.244 Sum_probs=29.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
.|.+|||+|+ |-+|...++.+...|. +|++..+++..
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~~~~ 212 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGA---EVSVFARNEHK 212 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTC---EEEEECSSSTT
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC---eEEEEeCCHHH
Confidence 5789999997 9999998887777774 67888877654
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=87.49 E-value=0.94 Score=44.01 Aligned_cols=37 Identities=11% Similarity=0.021 Sum_probs=30.0
Q ss_pred CC-CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 EN-KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~-~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.| .+|||+||+|-+|...+.-+...|. ++++++++..
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga---~vi~~~~~~~ 203 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNF---NSISVIRDRP 203 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTC---EEEEEECCCT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCcc
Confidence 46 8999999999999999887777774 5677777554
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=87.45 E-value=4.5 Score=40.52 Aligned_cols=86 Identities=17% Similarity=0.152 Sum_probs=53.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC-HHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS-ATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~-~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++|+|+|.|. |-.|..+++.|.+.|++| .+..+...... ..++++ ..++.
T Consensus 7 ~~~k~v~viG~-G~sG~s~A~~l~~~G~~V---~~~D~~~~~~~~~~~~L~------------------------~~gi~ 58 (451)
T 3lk7_A 7 FENKKVLVLGL-ARSGEAAARLLAKLGAIV---TVNDGKPFDENPTAQSLL------------------------EEGIK 58 (451)
T ss_dssp TTTCEEEEECC-TTTHHHHHHHHHHTTCEE---EEEESSCGGGCHHHHHHH------------------------HTTCE
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHhCCCEE---EEEeCCcccCChHHHHHH------------------------hCCCE
Confidence 57899999997 778999999999999754 66665432111 122222 14666
Q ss_pred EEecCCCCCCCCCCchhhHHHhccC-ccEEEEcccccCcchhHHHHHH
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNK-LDVVINLAATTNFDERYDVALD 135 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~-vd~Vih~Aa~~~~~~~~~~~~~ 135 (492)
+..|.-. + .++++ +|.||.+.|...-+..+..+.+
T Consensus 59 ~~~g~~~--------~----~~~~~~~d~vv~spgi~~~~p~~~~a~~ 94 (451)
T 3lk7_A 59 VVCGSHP--------L----ELLDEDFCYMIKNPGIPYNNPMVKKALE 94 (451)
T ss_dssp EEESCCC--------G----GGGGSCEEEEEECTTSCTTSHHHHHHHH
T ss_pred EEECCCh--------H----HhhcCCCCEEEECCcCCCCChhHHHHHH
Confidence 6666432 1 23355 9999999886543333343433
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=87.40 E-value=1.9 Score=44.69 Aligned_cols=104 Identities=19% Similarity=0.136 Sum_probs=60.7
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcC----hhhHHHHHhcCCchhh
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGK----DLFRVLKEKNGTHLNA 81 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~----~~f~~l~~~~~~~~~~ 81 (492)
-+++.+|+|.| .|-+|..+++.|.+.| |++|.++.+..-..+-..|.. .+-.+. ..-++|++-.|
T Consensus 323 kL~~arVLIVG-aGGLGs~vA~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP----- 394 (615)
T 4gsl_A 323 IIKNTKVLLLG-AGTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP----- 394 (615)
T ss_dssp HHHTCEEEEEC-CSHHHHHHHHHHHHTT--CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCT-----
T ss_pred HHhCCeEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCC-----
Confidence 45778999999 5779999999999977 588888877654333222210 000011 11223333333
Q ss_pred hccCceEEEecCCCCCCCCCCc-------hhhHHHhccCccEEEEccc
Q 037479 82 LISEKITLVPGDITREDLGVKD-------SNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 82 ~~~~~v~~v~gDl~~~~lgl~~-------~~~~~~~~~~vd~Vih~Aa 122 (492)
.-+++.+..++..++.-+++ .+....++++.|+||.|..
T Consensus 395 --~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD 440 (615)
T 4gsl_A 395 --LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD 440 (615)
T ss_dssp --TCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred --CcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence 13556666666433322211 1223466789999999865
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=87.28 E-value=0.3 Score=47.27 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=29.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|.+|||+|| |-+|..++..+...|. ++|++..|++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGA--GPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 6889999999 9999999988777775 3568887753
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=86.94 E-value=0.95 Score=42.76 Aligned_cols=32 Identities=22% Similarity=0.339 Sum_probs=27.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
++|.|.||+|.+|..++..|.+.|++| ++..|
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V---~~~~~ 53 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPI---SILDR 53 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCE---EEECT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeE---EEEEC
Confidence 589999999999999999999998754 55544
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=86.90 E-value=0.85 Score=44.39 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=28.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|.+|||+| +|-+|...+..+...|. +|+++.+++
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga---~Vi~~~~~~ 223 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGA---EVIVTSSSR 223 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCC---EEEEEecCc
Confidence 578999999 89999999888877774 668887754
|
| >2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1 | Back alignment and structure |
|---|
Probab=86.82 E-value=3 Score=45.35 Aligned_cols=93 Identities=14% Similarity=0.171 Sum_probs=57.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH----HHhhc---ChhhHHHHHhcCCchhhh
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH----NEIIG---KDLFRVLKEKNGTHLNAL 82 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~----~~~~~---~~~f~~l~~~~~~~~~~~ 82 (492)
+++.+|+|.|+.| +|..+++.|.+.| |++|.++....-..+-..|-. +.+-. ...-++|++-.|
T Consensus 409 l~~~~vlvvG~Gg-lG~~~~~~L~~~G--vg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np------ 479 (805)
T 2nvu_B 409 LDTCKVLVIGAGG-LGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP------ 479 (805)
T ss_dssp HHTCCEEEECCSS-HHHHHHHHHHTTT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST------
T ss_pred HhCCeEEEECCCH-HHHHHHHHHHHcC--CCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCC------
Confidence 3788999999555 8999999999987 588888877654433333310 00000 011233444333
Q ss_pred ccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcc
Q 037479 83 ISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLA 121 (492)
Q Consensus 83 ~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~A 121 (492)
.-+|+.+..+++. .+ ..++++.|+||.|.
T Consensus 480 -~~~v~~~~~~~~~-------~~--~~~~~~~d~vv~~~ 508 (805)
T 2nvu_B 480 -NCNVVPHFNKIQD-------FN--DTFYRQFHIIVCGL 508 (805)
T ss_dssp -TCEEEEEESCGGG-------SC--HHHHHTCSEEEECC
T ss_pred -CCEEEEEeccccc-------cH--HHHHhcCCEEEECC
Confidence 1456777777763 22 25668999999885
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=86.81 E-value=0.59 Score=44.62 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=28.3
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
+|||+||+|-+|...++.+...|. +|++..++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga---~Vi~~~~~~~ 182 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY---QVAAVSGRES 182 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCGG
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC---EEEEEeCCHH
Confidence 499999999999999988887775 5688887654
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=86.80 E-value=3.2 Score=39.42 Aligned_cols=107 Identities=18% Similarity=0.039 Sum_probs=60.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|.|.|| |.+|..++..|++.|. ..|.+..|++.. .+....++... . ...+ ...++...
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~--~~V~l~D~~~~~---~~~~~~~l~~~-----~-~~~~------~~~~i~~t- 64 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNL--ADVVLFDIAEGI---PQGKALDITHS-----M-VMFG------STSKVIGT- 64 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSH---HHHHHHHHHHH-----H-HHHT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--ceEEEEeCCchH---HHHHHHHHHhh-----h-hhcC------CCcEEEEC-
Confidence 478999997 9999999999999885 246777776422 22211011000 0 0000 00122211
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
. + . ..++++|+||-+++...- .....+....|....+.+++.+.+.
T Consensus 65 ~------------d-~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~ 111 (317)
T 2ewd_A 65 D------------D-Y-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKY 111 (317)
T ss_dssp S------------C-G-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred C------------C-H-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHH
Confidence 1 1 2 345789999999975432 1222234556677777777777665
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=86.71 E-value=2 Score=40.32 Aligned_cols=28 Identities=21% Similarity=0.374 Sum_probs=24.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPN 38 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~ 38 (492)
+.++|.|.|+||-.|+.+++.+++.|++
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~ 33 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTK 33 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCe
Confidence 4578999999999999999999988763
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=86.51 E-value=0.36 Score=48.49 Aligned_cols=32 Identities=9% Similarity=0.100 Sum_probs=27.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
|+|.|.| +|.+|..++..|.+.|++ |.+..|+
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~---V~~~d~~ 32 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHE---VIGVDVS 32 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCE---EEEECSC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCE---EEEEECC
Confidence 5799998 899999999999999964 5777665
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=86.43 E-value=0.79 Score=45.39 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=28.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|.+|||+|| |-+|...+.-+...|. .+|++..++.
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 248 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHAGA--SKVILSEPSE 248 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 4789999998 9999998887777775 4667776653
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=86.31 E-value=1.5 Score=41.87 Aligned_cols=107 Identities=17% Similarity=0.065 Sum_probs=61.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|.|+|| |.+|..++..|...|. + .|.+..+++.. .+....++... . . . .+ ...++...
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~-~-~v~L~Di~~~~---l~~~~~~l~~~-~-~---~-~~------~~~~i~~t- 64 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNL-G-DVVLFDIVKNM---PHGKALDTSHT-N-V---M-AY------SNCKVSGS- 64 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSH---HHHHHHHHHTH-H-H---H-HT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCHHH---HHHHHHHHHhh-h-h---h-cC------CCcEEEEC-
Confidence 468999998 9999999999998775 2 46666665422 22211111110 0 0 0 00 00112210
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chh-----HHHHHHHhHHHHHHHHHHHHhc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DER-----YDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~-----~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
. + . ..++++|+||-+++...- ... -.+....|+.-.+.+.+.+.+.
T Consensus 65 ~------------d-~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~ 116 (322)
T 1t2d_A 65 N------------T-Y-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN 116 (322)
T ss_dssp C------------C-G-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred C------------C-H-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 2 446899999999975421 111 2344667777778888777765
|
| >1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=86.29 E-value=1.2 Score=45.04 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=28.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhh--CCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRV--QPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~--g~~V~~i~~lvR~~ 49 (492)
++++|.|.||.+..|..++..|++. +.....|.+..|.+
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~ 67 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK 67 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH
Confidence 4569999998765577788888876 33245678888754
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=86.28 E-value=1.5 Score=41.28 Aligned_cols=29 Identities=10% Similarity=0.248 Sum_probs=26.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPN 38 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~ 38 (492)
+.|++++|.|+++.+|+.++..|++.|..
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAt 191 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNAT 191 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCe
Confidence 57899999999999999999999998743
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=86.27 E-value=1.2 Score=41.65 Aligned_cols=29 Identities=14% Similarity=0.147 Sum_probs=26.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPN 38 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~ 38 (492)
++|++++|.|+++.+|+.++..|++.|..
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAt 185 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCT 185 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCE
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCe
Confidence 47899999999999999999999998743
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=86.18 E-value=1.4 Score=40.95 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=24.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhh
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRV 35 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~ 35 (492)
++|++++|.|+++.+|+-++..|++.
T Consensus 156 l~gk~vvVvG~s~iVG~p~A~lL~~~ 181 (281)
T 2c2x_A 156 IAGAHVVVIGRGVTVGRPLGLLLTRR 181 (281)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHTST
T ss_pred CCCCEEEEECCCcHHHHHHHHHHhcC
Confidence 57899999999999999999999987
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=86.04 E-value=1.2 Score=42.48 Aligned_cols=36 Identities=11% Similarity=0.139 Sum_probs=30.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
+.|++++|.|++..+|+.++..|++.|. +|++..|+
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gA---tVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGA---TVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSC---EEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCC---EEEEEeCc
Confidence 5789999999999999999999999884 56777664
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=85.88 E-value=0.89 Score=42.60 Aligned_cols=37 Identities=32% Similarity=0.412 Sum_probs=31.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+++++++|+|+ |-+|+.++..|.+.|. .+|++..|+.
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~ 160 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQP--ASITVTNRTF 160 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCC--SEEEEEESSH
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCC--CeEEEEECCH
Confidence 46899999997 7899999999999874 5778888864
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=85.81 E-value=0.96 Score=43.90 Aligned_cols=36 Identities=8% Similarity=0.003 Sum_probs=29.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.|.+|||+|+ |-+|...++.+...|. +|++..++..
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga---~Vi~~~~~~~ 215 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGH---HVTVISSSNK 215 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEeCChH
Confidence 6889999995 8999999987777774 6788887643
|
| >3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=85.75 E-value=3.2 Score=46.02 Aligned_cols=40 Identities=13% Similarity=0.186 Sum_probs=32.9
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
++-+++.+|+|.|+ |-+|..+++.|.+.| |+++.++....
T Consensus 22 q~rL~~s~VlIvG~-GGlGseiak~La~aG--Vg~itlvD~D~ 61 (1015)
T 3cmm_A 22 MLKMQTSNVLILGL-KGLGVEIAKNVVLAG--VKSMTVFDPEP 61 (1015)
T ss_dssp HHHHTTCEEEEECC-SHHHHHHHHHHHHHC--CSEEEEECCSB
T ss_pred HHHHhcCEEEEECC-ChHHHHHHHHHHHcC--CCeEEEecCCE
Confidence 45578899999996 669999999999988 58888876553
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=85.70 E-value=1 Score=43.58 Aligned_cols=36 Identities=22% Similarity=0.152 Sum_probs=28.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.|.+|||+|+ |-+|...+..+...|. +|++..|++
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~~ 202 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGA---FVVCTARSP 202 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEcCCH
Confidence 35789999997 8999999887777775 467777653
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=85.40 E-value=5.9 Score=37.11 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=32.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
+.|++|.|.| .|-+|+.++..|...|. +|++..|+...
T Consensus 120 l~g~tvGIIG-lG~IG~~vA~~l~~~G~---~V~~~dr~~~~ 157 (290)
T 3gvx_A 120 LYGKALGILG-YGGIGRRVAHLAKAFGM---RVIAYTRSSVD 157 (290)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHHTC---EEEEECSSCCC
T ss_pred eecchheeec-cCchhHHHHHHHHhhCc---EEEEEeccccc
Confidence 5689999999 89999999999999886 55787776543
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=85.40 E-value=0.69 Score=43.32 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=31.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+.++|.|.|+ |-+|..++..|++.|+...+|++..|+.
T Consensus 2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4689999995 9999999999999997555678877764
|
| >4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* | Back alignment and structure |
|---|
Probab=85.39 E-value=0.69 Score=48.46 Aligned_cols=114 Identities=15% Similarity=0.109 Sum_probs=65.3
Q ss_pred CCCEEEEeC-CcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 11 ENKTILVTG-ATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 11 ~~~~vlITG-atGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+++.|++.| |+|-|....+....+.+-.| +||++-.+.......+ ++.+ +.+.++|++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~v-kVyAVEknp~A~~a~~--------------~v~~------N~~~dkVtV 415 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRI-KLYAVEKNPNAVVTLE--------------NWQF------EEWGSQVTV 415 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEE-EEEEEESCHHHHHHHH--------------HHHH------HTTGGGEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCc-EEEEEECCHHHHHHHH--------------HHHh------ccCCCeEEE
Confidence 446799998 78888877777777655433 6777755432111111 1111 223588999
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEE-cccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVIN-LAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih-~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|.||+.+- .+.++||+||. .-|..-++|.. ..++.++.+.-+...+++-|++.+|.
T Consensus 416 I~gd~eev-----------~LPEKVDIIVSEwMG~fLl~E~m-----------levL~Ardr~LKPgGimiPs~atlyi 472 (637)
T 4gqb_A 416 VSSDMREW-----------VAPEKADIIVSELLGSFADNELS-----------PECLDGAQHFLKDDGVSIPGEYTSFL 472 (637)
T ss_dssp EESCTTTC-----------CCSSCEEEEECCCCBTTBGGGCH-----------HHHHHHHGGGEEEEEEEESCEEEEEE
T ss_pred EeCcceec-----------cCCcccCEEEEEcCcccccccCC-----------HHHHHHHHHhcCCCcEEccccceEEE
Confidence 99999842 33478999995 22332233321 12444554432334577777766654
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=85.14 E-value=0.6 Score=43.07 Aligned_cols=36 Identities=22% Similarity=0.452 Sum_probs=30.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.++ +|+|.|+ |-.|+.++..|++.|. .+|++..|+.
T Consensus 107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~--~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGA-GGAARAVIYALLQMGV--KDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECC-SHHHHHHHHHHHHTTC--CCEEEEESCH
T ss_pred CCC-eEEEECc-HHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 357 9999996 8899999999999885 5678888863
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=85.14 E-value=2.1 Score=38.45 Aligned_cols=34 Identities=21% Similarity=0.387 Sum_probs=28.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
++|++|||.| .|-+|...++.|++.|.+| .++..
T Consensus 29 L~gk~VLVVG-gG~va~~ka~~Ll~~GA~V---tVvap 62 (223)
T 3dfz_A 29 LKGRSVLVVG-GGTIATRRIKGFLQEGAAI---TVVAP 62 (223)
T ss_dssp CTTCCEEEEC-CSHHHHHHHHHHGGGCCCE---EEECS
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEE---EEECC
Confidence 6789999999 5899999999999999654 55544
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=85.03 E-value=1 Score=43.38 Aligned_cols=35 Identities=11% Similarity=0.136 Sum_probs=28.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|.+|||+|+ |-+|...++.+...|. +|+++.++.
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~~ 200 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGL---RVAAVDIDD 200 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 5789999997 7799999888877774 678887754
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=84.77 E-value=0.71 Score=41.29 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=27.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.+++|.|+| +|.+|+.++..|.+.|++ |++..|+
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~---V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFK---VVVGSRN 60 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 347899999 899999999999998864 4777775
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 492 | ||||
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-07 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-07 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-06 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-05 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 1e-05 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 4e-05 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-05 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 5e-04 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 7e-04 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 9e-04 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 0.001 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 0.002 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 0.002 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 0.002 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 0.002 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 0.003 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 0.004 |
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 51.3 bits (122), Expect = 1e-07
Identities = 49/376 (13%), Positives = 98/376 (26%), Gaps = 96/376 (25%)
Query: 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKD-LFRVLKE 73
IL+TG GF+ V I++ + ++ D L
Sbjct: 3 ILITGGAGFIGSAVVRHIIK----------------------NTQDTVVNIDKLTYAGNL 40
Query: 74 KNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYD-- 131
++ + ++ S + DI R + D V++LAA ++ D
Sbjct: 41 ESLSDISE--SNRYNFEHADICD-----SAEITRIFEQYQPDAVMHLAAESHVDRSITGP 93
Query: 132 -VALDLNTFGAKHVLNFSKKC--------AKLIVLVHVSTAFVWGEESGMLYESSFKMGD 182
++ N G +L ++K H+ST V+G
Sbjct: 94 AAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYG--------------- 138
Query: 183 TLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242
D+ +V L E Y + Y +K
Sbjct: 139 --------DLPHPDEVENSVTLPLFTET------------------TAYAPSSPYSASKA 172
Query: 243 MGEMFIEHLKE--NMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300
+ + + + + + G Y + E + I + + +G+ G
Sbjct: 173 SSDHLVRAWRRTYGLPTIVTNCSNNYGPY-----HFPEKL--IPLVILNALEGKPLPIYG 225
Query: 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFT 360
I D + + A+ + V Y +G +
Sbjct: 226 KGDQIRDWLYVEDHARALHMVV-----TEGKAGETYNIGGHNEKKNLDVVFTICDLLDEI 280
Query: 361 KKPWINKDGKPVKVGK 376
+ + V
Sbjct: 281 VPKATSYREQITYVAD 296
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.4 bits (120), Expect = 2e-07
Identities = 46/322 (14%), Positives = 91/322 (28%), Gaps = 95/322 (29%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLK 72
K IL+TG GF+ +K++ +E+ D F +
Sbjct: 2 KRILITGGAGFVGSHLTDKLM-----------------------MDGHEVTVVDNFFTGR 38
Query: 73 EKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATT---NFDER 129
++N V I E+ + + ++ E ++ ++D + +LA+ N+
Sbjct: 39 KRN--------------VEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYN 84
Query: 130 YDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASG 189
L NT G ++L +K+ L+ ST+ V+G+ +
Sbjct: 85 PIKTLKTNTIGTLNMLGLAKRVGA--RLLLASTSEVYGDPEVHPQSEDYWGHVNP----- 137
Query: 190 LDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249
G Y K + E
Sbjct: 138 -----------------------------------------IGPRACYDEGKRVAETMCY 156
Query: 250 HLKE--NMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307
+ + V + R G G R + + + +G G
Sbjct: 157 AYMKQEGVEVRVARIFNTFGPRMHMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRA 211
Query: 308 VIPADMVVNAIVVAVVAHAKQP 329
+VN +V + ++ P
Sbjct: 212 FQYVSDLVNGLVALMNSNVSSP 233
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (111), Expect = 2e-06
Identities = 51/388 (13%), Positives = 103/388 (26%), Gaps = 81/388 (20%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLK 72
L+TG TG E +L V + + +
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGR------------------I 43
Query: 73 EKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDV 132
E + A I + L GD+T D + E ++ + + + +
Sbjct: 44 EHLYKNPQAHIEGNMKLHYGDLT--DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY 101
Query: 133 ALDLNTFGAKHVLNFSKKCA--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGL 190
D++ G +L+ K C + ST+ ++G+ E K S
Sbjct: 102 TADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ----EIPQKETTPFYPRS-- 155
Query: 191 DIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250
YG K+ + +
Sbjct: 156 ---------------------------------------PYGA------AKLYAYWIVVN 170
Query: 251 LKE--NMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308
+E N+ + + R++ + +G + LG++ D
Sbjct: 171 FREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLE---CFSLGNLDAKRDW 227
Query: 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWINKD 368
A V A+ ++ +P D S+R + + + N+
Sbjct: 228 GHAKDYVEAMW--LMLQNDEPEDFVIATGEVHSVREFVEKSF-LHIGKTIVWEGKNENEV 284
Query: 369 GKPVKVGKITVFHDMASFYRYMTVRYIL 396
G+ + GK+ V D+ +
Sbjct: 285 GRCKETGKVHVTVDLKYYRPTEVDFLQG 312
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 45.3 bits (106), Expect = 1e-05
Identities = 25/164 (15%), Positives = 47/164 (28%), Gaps = 31/164 (18%)
Query: 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEK 74
+LVTG +G++ ++L + +++I D K
Sbjct: 3 VLVTGGSGYIGSHTCVQLL-----------------------QNGHDVIILDNLCNSKRS 39
Query: 75 NGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYD--- 131
+ L + T V GDI + + +D VI+ A E
Sbjct: 40 VLPVIERLGGKHPTFVEGDIRN-----EALMTEILHDHAIDTVIHFAGLKAVGESVQKPL 94
Query: 132 VALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYE 175
D N G +++ + + S + E
Sbjct: 95 EYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVE 138
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 45.2 bits (106), Expect = 1e-05
Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 29/161 (18%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLK 72
K L+TG TG E +L V + F +
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRR-------------------ASSFNTER 42
Query: 73 EKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYD- 131
+ + K L GD++ + R + D V NL A ++ ++
Sbjct: 43 VDHIYQDPHTCNPKFHLHYGDLSD-----TSNLTRILREVQPDEVYNLGAMSHVAVSFES 97
Query: 132 --VALDLNTFGAKHVLNFSKK--CAKLIVLVHVSTAFVWGE 168
D++ G +L + K ST+ ++G
Sbjct: 98 PEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL 138
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.5 bits (101), Expect = 4e-05
Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 30/178 (16%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLK 72
K +LVTG G++ V +++ + + D
Sbjct: 2 KIVLVTGGAGYIGSHTVVELI-----------------------ENGYDCVVADNLSNST 38
Query: 73 EKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDV 132
+ L L I D+ + + K+D VI+ A E +
Sbjct: 39 YDSVARLEVLTKHHIPFYEVDLCD-----RKGLEKVFKEYKIDSVIHFAGLKAVGESTQI 93
Query: 133 ALDLNTFGAKHVLNFSKKCAKLIV--LVHVSTAFVWGEESGMLYESSFKMGDTLNGAS 188
L + + + V V S+A V+G+ + L +
Sbjct: 94 PLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTN 151
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 42.9 bits (100), Expect = 5e-05
Identities = 54/327 (16%), Positives = 96/327 (29%), Gaps = 93/327 (28%)
Query: 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKD-LFRVLKE 73
+LVTG GF+ FV ++L A + +E+I D L
Sbjct: 3 LLVTGGAGFIGSHFVRQLL-----------------AGAYPDVPADEVIVLDSLTYAGNR 45
Query: 74 KNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDER---Y 130
N ++A ++ V GDI D+ L +D +++ AA ++ D
Sbjct: 46 ANLAPVDA--DPRLRFVHGDIR-------DAGLLARELRGVDAIVHFAAESHVDRSIAGA 96
Query: 131 DVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGL 190
V + N G + +L + A + +VHVST V+G + S +
Sbjct: 97 SVFTETNVQGTQTLLQCAVD-AGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN------- 148
Query: 191 DIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250
+ Y +K ++
Sbjct: 149 --------------------------------------------SPYAASKAGSDLVARA 164
Query: 251 LKE--NMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308
+ V I R G Y+ P + I G GD + +
Sbjct: 165 YHRTYGLDVRITRCCNNYGPYQHPE-------KLIPLFVTNLLDGGTLPLYGDGANVREW 217
Query: 309 IPADMVVNAIVVAVVAHAKQPSDVNNI 335
+ D I + + ++ +I
Sbjct: 218 VHTDDHCRGIALV--LAGGRAGEIYHI 242
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 39.9 bits (92), Expect = 5e-04
Identities = 26/164 (15%), Positives = 58/164 (35%), Gaps = 24/164 (14%)
Query: 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRV 70
+ K L+TG GF+ +E +L + +++G D F
Sbjct: 15 QPKVWLITGVAGFIGSNLLETLL-----------------------KLDQKVVGLDNFAT 51
Query: 71 LKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERY 130
++N + +L+SEK I + + D N + + L +
Sbjct: 52 GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDP 111
Query: 131 DVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLY 174
+ N G ++L ++ K+ + +++ +G+ G+
Sbjct: 112 ITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGLPK 154
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 39.2 bits (90), Expect = 7e-04
Identities = 19/171 (11%), Positives = 44/171 (25%), Gaps = 26/171 (15%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLK 72
++ LVTG TG + +L + +
Sbjct: 1 RSALVTGITGQDGAYLAKLLLE----------------------KGYRVHGLVARRSSDT 38
Query: 73 EKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDV 132
L I I GD+ D + + ++ + + +
Sbjct: 39 RWRLRELG--IEGDIQYEDGDMA--DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVT 94
Query: 133 ALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDT 183
++ G H+L ++ + ST+ ++G + +
Sbjct: 95 TGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR 145
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 39.1 bits (89), Expect = 9e-04
Identities = 13/54 (24%), Positives = 20/54 (37%)
Query: 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEI 62
F + K + VTG TGF + + VK L + T R + +
Sbjct: 5 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGM 58
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 38.9 bits (89), Expect = 0.001
Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 32/180 (17%)
Query: 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEK 74
+L+TG GFL L + + I+ +L R
Sbjct: 3 LLITGGCGFLGSNLASFALS----------------------QGIDLIVFDNLSRKGATD 40
Query: 75 NGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYD--- 131
N L++L V GDI K+ R D +LA D
Sbjct: 41 NLHWLSSL--GNFEFVHGDIRN-----KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPC 93
Query: 132 VALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLD 191
+ ++N G ++L ++ +++ ST V+G+ Y + ++ +G D
Sbjct: 94 MDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD 153
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 38.4 bits (88), Expect = 0.002
Identities = 53/320 (16%), Positives = 94/320 (29%), Gaps = 83/320 (25%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLK 72
K I+VTG GF+ FV + P+V + D
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVH---------------------VTVLDKLTYAG 41
Query: 73 EKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYD- 131
K +L A++ +++ LV GDI D+ L +++ K D +++ AA ++ D +
Sbjct: 42 NKA--NLEAILGDRVELVVGDIA-------DAELVDKLAAKADAIVHYAAESHNDNSLND 92
Query: 132 --VALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASG 189
+ N G +L I HVST V+G+
Sbjct: 93 PSPFIHTNFIGTYTLLEA--ARKYDIRFHHVSTDEVYGD--------------------- 129
Query: 190 LDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249
L + + + E Y + Y TK ++ ++
Sbjct: 130 LPLREDLPGHGEGPGEKFTA------------------ETNYNPSSPYSSTKAASDLIVK 171
Query: 250 HLKE--NMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307
+ I + G Y+ I I G G+ K + D
Sbjct: 172 AWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNIL-------AGIKPKLYGEGKNVRD 224
Query: 308 VIPADMVVNAIVVAVVAHAK 327
I + + +
Sbjct: 225 WIHTNDHSTGVWAILTKGRM 244
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 37.6 bits (87), Expect = 0.002
Identities = 28/183 (15%), Positives = 56/183 (30%), Gaps = 36/183 (19%)
Query: 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFR 69
K ++TG++ + + R V + R A+ T + +I+ +
Sbjct: 3 FAEKVAIITGSSNGIGRATAVLFAREGAKV---TITGRHAERLEETRQ---QILAAGVS- 55
Query: 70 VLKEKNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-- 127
+ + V D+T + + + + KLD+++N A D
Sbjct: 56 --------------EQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQ 101
Query: 128 ---------ERYDVALDLNTFGA----KHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLY 174
E YD L+LN K + IV + + + Y
Sbjct: 102 SKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYY 161
Query: 175 ESS 177
+
Sbjct: 162 SIA 164
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.4 bits (85), Expect = 0.002
Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47
+NK++ + GA+G ++ +++IL Q K+ L+ R
Sbjct: 13 QNKSVFILGASGETGRVLLKEILE-QGLFSKVTLIGR 48
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 37.7 bits (87), Expect = 0.002
Identities = 26/179 (14%), Positives = 50/179 (27%), Gaps = 32/179 (17%)
Query: 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFR 69
L+ KT+LVTG T + VE+ + + R + +
Sbjct: 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVI---HTCARNEYELNECL------------S 50
Query: 70 VLKEKNGTHLNALISEKITLVPGDIT-REDLGVKDSNLREEMWNKLDVVINLAATTNF-- 126
++K ++T D + R + + KLD++IN
Sbjct: 51 KWQKKGF---------QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKP 101
Query: 127 -----DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESGMLYESSFKM 180
E + + N A H+ + K ++ S +
Sbjct: 102 TLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSA 160
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 37.5 bits (85), Expect = 0.003
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 11 ENKTILVTGATGFLAKIFVEKILR 34
E +LVTGA GF+A VE++L
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLE 33
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 37.3 bits (84), Expect = 0.004
Identities = 13/87 (14%), Positives = 23/87 (26%), Gaps = 7/87 (8%)
Query: 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLK 72
++V G G+ + + V D + H +
Sbjct: 2 SRVMVIGGDGYCGWATALHLSKKNYEV-------CIVDNLVRRLFDHQLGLESLTPIASI 54
Query: 73 EKNGTHLNALISEKITLVPGDITREDL 99
+ AL + I L GDI +
Sbjct: 55 HDRISRWKALTGKSIELYVGDICDFEF 81
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 492 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.98 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.97 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.97 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.97 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.96 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.96 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.95 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.95 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.95 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.93 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.91 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.91 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.91 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.9 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.9 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.9 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.89 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.86 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.68 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.67 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.67 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.67 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.65 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.65 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.65 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.64 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.64 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.64 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.64 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.64 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.63 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.63 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.62 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.61 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.61 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.61 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.61 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.61 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.6 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.59 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.58 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.58 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.58 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.58 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.58 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.57 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.56 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.56 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.56 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.56 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.56 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.55 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.55 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.55 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.54 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.54 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.53 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.51 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.51 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.5 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.5 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.49 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.48 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.48 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.48 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.47 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.47 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.46 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.46 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.44 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.44 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.42 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.4 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.39 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.36 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.33 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.22 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.22 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.19 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.12 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.04 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.04 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.88 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.61 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.6 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.56 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.45 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.4 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.36 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.29 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.18 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.1 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.1 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.07 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.04 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.03 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.95 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.94 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.8 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.77 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.75 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.69 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.63 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.6 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.46 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.42 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.27 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.27 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.14 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.12 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.1 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.05 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.86 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 95.85 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 95.79 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 95.69 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 95.65 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.57 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 95.43 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.39 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 95.33 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 95.29 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.25 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 95.09 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 94.59 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 94.57 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 94.07 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 93.99 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 93.47 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 93.16 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 92.97 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 92.83 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 92.83 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 92.69 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 92.57 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 92.51 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 92.49 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 92.43 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 92.24 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 92.11 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 92.09 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 92.04 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 91.43 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 91.26 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 91.18 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 91.05 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 91.0 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 90.84 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 90.72 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 90.58 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 90.55 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 90.25 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 90.2 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 90.02 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 89.91 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 89.69 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 89.68 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 89.67 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 89.35 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 89.35 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 89.26 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 88.95 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 88.94 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 88.67 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 88.51 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 88.38 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 88.33 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 88.1 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 87.86 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 87.33 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 87.16 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 86.85 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 86.8 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 85.91 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 84.87 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 84.7 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 84.4 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 84.38 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 83.79 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 83.74 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 83.73 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 83.68 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 83.54 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 83.24 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 82.99 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 81.31 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 81.29 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 81.09 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 80.1 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.8e-35 Score=290.70 Aligned_cols=261 Identities=17% Similarity=0.129 Sum_probs=190.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|.|||||||||||++|+++|++.|++ |++++|...... .+|+. .+.... ....++++++.|
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~---V~~~~r~~~~~~-~~~~~-~~~~~~--------------~~~~~~~~~~~~ 62 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYE---VHGIKRRASSFN-TERVD-HIYQDP--------------HTCNPKFHLHYG 62 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEECC-------------------------------------CCEEECCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCE---EEEEECCCcccc-hhhHH-HHHhhh--------------hhcCCCeEEEEe
Confidence 78999999999999999999999974 589998643221 11111 111000 112478999999
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcc--cceeEEEeeecee
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCA--KLIVLVHVSTAFV 165 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~~V~vST~~v 165 (492)
|++ +.+.++.+++ ++|+|||+||..+.. +++...+++|+.||.+|+++|++.. +.++|||+||+.|
T Consensus 63 Dl~-------d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~v 135 (357)
T d1db3a_ 63 DLS-------DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL 135 (357)
T ss_dssp CSS-------CHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG
T ss_pred ecC-------CHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhh
Confidence 999 6666667777 459999999986543 4567789999999999999999862 3457999999999
Q ss_pred ecccc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 166 WGEES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 166 ~~~~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
||... ..++|+.. ..|.|.|+.||..+
T Consensus 136 YG~~~~~~~~E~~~----------------------------------------------------~~P~~~Y~~sK~~~ 163 (357)
T d1db3a_ 136 YGLVQEIPQKETTP----------------------------------------------------FYPRSPYAVAKLYA 163 (357)
T ss_dssp GTTCCSSSBCTTSC----------------------------------------------------CCCCSHHHHHHHHH
T ss_pred hCCCCCCCcCCCCC----------------------------------------------------CCCCChHHHHHHHH
Confidence 98643 23444321 14678999999999
Q ss_pred HHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee-eEEecCCCcccceeehhhhhhHHHHH
Q 037479 245 EMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL-TCFLGDVKGIVDVIPADMVVNAIVVA 321 (492)
Q Consensus 245 E~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~v~vddva~~ii~~ 321 (492)
|++++.+ ..+++++++||+.||||+..+.. ........+.....|.. ....+++...+|+++|+|+|++++.+
T Consensus 164 E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~----~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~ 239 (357)
T d1db3a_ 164 YWITVNYRESYGMYACNGILFNHESPRRGETF----VTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM 239 (357)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTSCTTS----HHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEEEeccccCCCCCcCC----CchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHH
Confidence 9999987 34899999999999999764311 01223344444445443 34568999999999999999999988
Q ss_pred HHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 322 VVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 322 ~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+... . +++||++++ .++|+.++++.+.+.+|..+
T Consensus 240 ~~~~---~---~~~yni~sg--~~~s~~~~~~~~~~~~g~~~ 273 (357)
T d1db3a_ 240 LQQE---Q---PEDFVIATG--VQYSVRQFVEMAAAQLGIKL 273 (357)
T ss_dssp TSSS---S---CCCEEECCC--CCEEHHHHHHHHHHTTTEEE
T ss_pred HhCC---C---CCeEEECCC--CceehHHHHHHHHHHhCCcc
Confidence 7631 1 678999999 89999999999999988543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=7.4e-34 Score=282.38 Aligned_cols=264 Identities=19% Similarity=0.248 Sum_probs=196.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|++| |.++.+...... .+++. .+ ...++++++.+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~v--v~~~d~~~~~~~-~~~~~-~~-------------------~~~~~~~~~~~ 57 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDT--VVNIDKLTYAGN-LESLS-DI-------------------SESNRYNFEHA 57 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCE--EEEEECCCTTCC-GGGGT-TT-------------------TTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCE--EEEEeCCCcccc-HHHHH-hh-------------------hhcCCcEEEEc
Confidence 689999999999999999999999854 344443322211 11111 00 01368999999
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcc--------cceeEEE
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCA--------KLIVLVH 159 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~--------~~~~~V~ 159 (492)
|++ +.+.++.+++ ++|+||||||..+.. +.+..++++|+.||.+++++|++.+ ++++|||
T Consensus 58 Dl~-------d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~ 130 (361)
T d1kewa_ 58 DIC-------DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHH 130 (361)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEE
T ss_pred cCC-------CHHHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEE
Confidence 999 5555556665 689999999976543 3456789999999999999998762 3458999
Q ss_pred eeeceeecccccc-eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHH
Q 037479 160 VSTAFVWGEESGM-LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYV 238 (492)
Q Consensus 160 vST~~v~~~~~~~-i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~ 238 (492)
+||..|||..... ..|..... +.. ....+..|.+.|+
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~~--------~~~----------------------------------~e~~~~~p~s~Yg 168 (361)
T d1kewa_ 131 ISTDEVYGDLPHPDEVENSVTL--------PLF----------------------------------TETTAYAPSSPYS 168 (361)
T ss_dssp EEEGGGGCCCCCGGGSCTTSCC--------CCB----------------------------------CTTSCCCCCSHHH
T ss_pred eccceeeCCCccCCccccccCC--------CCc----------------------------------ccCCCCCCCCHHH
Confidence 9999999975432 11211110 000 0001225778999
Q ss_pred HHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhh
Q 037479 239 FTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVN 316 (492)
Q Consensus 239 ~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~ 316 (492)
.||.++|+++..+ ..+++++++||+.||||...+ + ..++.++..+..|....+++++++.+|++||+|+|+
T Consensus 169 ~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~--~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ 241 (361)
T d1kewa_ 169 ASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-----E--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHAR 241 (361)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-----T--SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc-----C--cHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHH
Confidence 9999999999987 458999999999999987643 1 235667777888887778899999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 317 AIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 317 ~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+++.++..... +++||++++ +++++.++++.+.+.++..
T Consensus 242 ai~~~~~~~~~-----~~~~Ni~s~--~~~s~~~~~~~i~~~~~~~ 280 (361)
T d1kewa_ 242 ALHMVVTEGKA-----GETYNIGGH--NEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp HHHHHHHHCCT-----TCEEEECCC--CEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCC-----CCeEEECCC--CCcchHHHHhHhhhhcccc
Confidence 99999985322 679999998 8999999999998877653
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=1.9e-33 Score=275.21 Aligned_cols=256 Identities=21% Similarity=0.267 Sum_probs=201.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCC---eEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVK---KLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~---~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|+|||||||||||++|+++|++.|++|. +|+.+.+........ .+. ......++.+
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~-~~~--------------------~~~~~~~~~~ 59 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA-NLA--------------------PVDADPRLRF 59 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGG-GGG--------------------GGTTCTTEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHh-Hhh--------------------hhhcCCCeEE
Confidence 6899999999999999999999998764 455554432222110 000 0001367999
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+.+|+. +..........+|+|+|+|+..... ......+++|+.||.+++++|++. ++++|||+||+.+|
T Consensus 60 ~~~d~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~y 131 (322)
T d1r6da_ 60 VHGDIR-------DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVY 131 (322)
T ss_dssp EECCTT-------CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGG
T ss_pred EEeccc-------cchhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceee
Confidence 999999 5555556778999999999876443 345677899999999999999998 78999999999999
Q ss_pred ccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
|.... .++|+. +..+.+.|+.||..+|
T Consensus 132 g~~~~~~~~E~~----------------------------------------------------~~~p~~~Y~~sK~~~E 159 (322)
T d1r6da_ 132 GSIDSGSWTESS----------------------------------------------------PLEPNSPYAASKAGSD 159 (322)
T ss_dssp CCCSSSCBCTTS----------------------------------------------------CCCCCSHHHHHHHHHH
T ss_pred cCCCCCCCCCCC----------------------------------------------------CCCCCCHHHHHHHHHH
Confidence 86532 233332 1256789999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
.+++.+ ..+++++++||+.|||+.+.+- ..++.++..+..|....+++++++.+|++||+|+|++++.++.
T Consensus 160 ~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-------~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~ 232 (322)
T d1r6da_ 160 LVARAYHRTYGLDVRITRCCNNYGPYQHPE-------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLA 232 (322)
T ss_dssp HHHHHHHHHHCCCEEEEEECEEECTTCCTT-------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeeeEECcCCCcC-------cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHh
Confidence 999887 4589999999999999876431 3456777788888877788999999999999999999999997
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+... +++||++++ +++++.++++.+.+.++...
T Consensus 233 ~~~~-----~~~~ni~~~--~~~s~~e~~~~i~~~~~~~~ 265 (322)
T d1r6da_ 233 GGRA-----GEIYHIGGG--LELTNRELTGILLDSLGADW 265 (322)
T ss_dssp HCCT-----TCEEEECCC--CEEEHHHHHHHHHHHHTCCG
T ss_pred CCCC-----CCeeEEeec--ccchhHHHHHHHHHHhCCCc
Confidence 5322 789999999 99999999999999998653
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-34 Score=282.45 Aligned_cols=253 Identities=17% Similarity=0.177 Sum_probs=192.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|||||||||||++|+++|++.|++| +++.|...+... .+. . .....++....
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V---~~~d~~~~~~~~--~~~-~-------------------~~~~~~~d~~~ 55 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEV---TVVDNFFTGRKR--NVE-H-------------------WIGHENFELIN 55 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEE---EEEECCSSCCGG--GTG-G-------------------GTTCTTEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEE---EEEeCCCcCCHH--HHH-H-------------------hcCCCceEEEe
Confidence 4799999999999999999999999754 777764322110 000 0 00124456666
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
+|+.+ .+..++|+|||+||.++.. .+....+++|+.||.+++++|++. ++ +|||+||..|||.
T Consensus 56 ~~~~~------------~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~ 121 (312)
T d2b69a1 56 HDVVE------------PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGD 121 (312)
T ss_dssp CCTTS------------CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBS
T ss_pred hHHHH------------HHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecC
Confidence 66552 3446899999999976542 456778999999999999999987 54 7999999999986
Q ss_pred cc-cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHH
Q 037479 169 ES-GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMF 247 (492)
Q Consensus 169 ~~-~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~ 247 (492)
.. ..+.|..+.+.+ +..+.+.|+.||..+|.+
T Consensus 122 ~~~~~~~e~~~~~~~-----------------------------------------------~~~p~~~Y~~sK~~~E~~ 154 (312)
T d2b69a1 122 PEVHPQSEDYWGHVN-----------------------------------------------PIGPRACYDEGKRVAETM 154 (312)
T ss_dssp CSSSSBCTTCCCBCC-----------------------------------------------SSSTTHHHHHHHHHHHHH
T ss_pred CCCCCCCccccCCCC-----------------------------------------------CCCCccHHHHHHHHHHHH
Confidence 43 244554433211 124678999999999999
Q ss_pred HHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 248 IEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 248 v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
+..+ ..+++++++||+.||||...+.. ...++.++..+..|....+++++...+|++||+|+|++++.++...
T Consensus 155 ~~~~~~~~~~~~~~lR~~~vyGp~~~~~~-----~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~ 229 (312)
T d2b69a1 155 CYAYMKQEGVEVRVARIFNTFGPRMHMND-----GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 229 (312)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTCCTTC-----CCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred HHHHHHHhCCcEEEEEeeeEECCCCCCCC-----ccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc
Confidence 9887 45899999999999998764321 1345677778888888788899999999999999999999887532
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. +++||++++ .++++.++.+.+.+.++..+
T Consensus 230 ---~---~~~~n~~~~--~~~~~~~~~~~i~~~~~~~~ 259 (312)
T d2b69a1 230 ---V---SSPVNLGNP--EEHTILEFAQLIKNLVGSGS 259 (312)
T ss_dssp ---C---CSCEEESCC--CEEEHHHHHHHHHHHHTCCC
T ss_pred ---c---CCceEecCC--cccchhhHHHHHHHHhCCCC
Confidence 1 568999999 99999999999999998765
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.2e-32 Score=271.70 Aligned_cols=266 Identities=17% Similarity=0.170 Sum_probs=206.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC-HHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS-ATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~-~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.+.|+|||||||||||++|+++|++.|++ |++++|...+.. ..+++. .... ....+++.
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~---V~~~d~~~~~~~~~~~~~~-------------~~~~----~~~~~~~~ 73 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQK---VVGLDNFATGHQRNLDEVR-------------SLVS----EKQWSNFK 73 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCHHHHHHHH-------------HHSC----HHHHTTEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCE---EEEEECCCCcchhhHHHHH-------------Hhhh----hcccCCee
Confidence 34589999999999999999999999974 588887544321 111111 1110 11136789
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc---chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeecee
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF---DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFV 165 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v 165 (492)
++.+|+. +...........++|+|+|+.... .++....+++|+.||.+++++|++. ++++|||+||+.+
T Consensus 74 ~~~~d~~-------d~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~v 145 (341)
T d1sb8a_ 74 FIQGDIR-------NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSST 145 (341)
T ss_dssp EEECCTT-------SHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG
T ss_pred EEeeccc-------cccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEccccee
Confidence 9999999 555565677789999999987653 3456778999999999999999998 7899999999999
Q ss_pred eccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHH
Q 037479 166 WGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMG 244 (492)
Q Consensus 166 ~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~a 244 (492)
||.... .++|+. +..|.+.|+.||.++
T Consensus 146 yg~~~~~~~~E~~----------------------------------------------------~~~p~~~Y~~sK~~~ 173 (341)
T d1sb8a_ 146 YGDHPGLPKVEDT----------------------------------------------------IGKPLSPYAVTKYVN 173 (341)
T ss_dssp GTTCCCSSBCTTC----------------------------------------------------CCCCCSHHHHHHHHH
T ss_pred eCCCCCCCccCCC----------------------------------------------------CCCCCCcchHHHHHH
Confidence 986542 334432 125778999999999
Q ss_pred HHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHH
Q 037479 245 EMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAV 322 (492)
Q Consensus 245 E~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~ 322 (492)
|+++..+ ..+++++++||+.|||+...+...+ . ..+..++..+..|....+.+++.+.+|++||+|+|.++..++
T Consensus 174 E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~-~--~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~ 250 (341)
T d1sb8a_ 174 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAY-A--AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 250 (341)
T ss_dssp HHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTT-C--CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEeceeeccCcCCCCch-h--hhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhh
Confidence 9999877 4589999999999999988653221 1 234455667777887788899999999999999999999988
Q ss_pred HhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 323 VAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 323 ~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
....... +++||++++ +++|+.++++.+.+.++...
T Consensus 251 ~~~~~~~---~~~~~~~~~--~~~si~~i~~~i~~~~~~~~ 286 (341)
T d1sb8a_ 251 TAGLDAR---NQVYNIAVG--GRTSLNQLFFALRDGLAENG 286 (341)
T ss_dssp TCCGGGC---SEEEEESCS--CCEEHHHHHHHHHHHHHHTT
T ss_pred hcccccc---ceeeeeccc--ccchHHHHHHHHHHHhcccc
Confidence 7543332 789999998 89999999999999998764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.9e-32 Score=266.27 Aligned_cols=264 Identities=20% Similarity=0.214 Sum_probs=193.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC-HHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS-ATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~-~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
|+|||||||||||++|+..|++.|++ |++++|...... ...... .....++.+++
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~---V~~~d~~~~~~~~~~~~~~---------------------~~~~~~~~~~~ 56 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHD---VIILDNLCNSKRSVLPVIE---------------------RLGGKHPTFVE 56 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTTHHHHHH---------------------HHHTSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCCCcchhhHHHHH---------------------hhcCCCCEEEE
Confidence 68999999999999999999999975 478877544322 211111 11136899999
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+|++ +.+.+..+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+||..+|
T Consensus 57 ~Dl~-------d~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy 128 (338)
T d1udca_ 57 GDIR-------NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVY 128 (338)
T ss_dssp CCTT-------CHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred eecC-------CHHHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEE
Confidence 9999 5666667766 799999999976543 345688999999999999999998 89999999999999
Q ss_pred ccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
+.... ...|+.. ...+.+.|+.+|..+|
T Consensus 129 ~~~~~~~~~e~~~---------------------------------------------------~~~p~~~Y~~sK~~~e 157 (338)
T d1udca_ 129 GDQPKIPYVESFP---------------------------------------------------TGTPQSPYGKSKLMVE 157 (338)
T ss_dssp CSCCSSSBCTTSC---------------------------------------------------CCCCSSHHHHHHHHHH
T ss_pred ccccccccccccc---------------------------------------------------cCCCcchHHHHHhhhh
Confidence 76432 1111110 1156789999999999
Q ss_pred HHHHHh---cCCCcEEEEeCCceecCCCCCCCccccC--cCchHHHHH-hcc-CceeeEEecC------CCcccceeehh
Q 037479 246 MFIEHL---KENMSVAIVRPTIITGTYKEPFPGWAEG--IRTIDSLAV-GYG-KGRLTCFLGD------VKGIVDVIPAD 312 (492)
Q Consensus 246 ~~v~~~---~~~~~~~ivRPs~v~g~~~~p~~gw~~~--~~~~~~~~~-~~~-~g~~~~~~~~------~~~~~d~v~vd 312 (492)
+++.++ ..+++++++||+.|||+...+.-|.-.. .......+. ... .+....+.|+ +...+|+++|+
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~ 237 (338)
T d1udca_ 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHH
T ss_pred HHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEe
Confidence 999865 3589999999999999977543322111 122223332 222 2233344443 67788999999
Q ss_pred hhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 313 MVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 313 dva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
|++.++..+......... +++||++++ +++|+.|+++.+.+.+|...
T Consensus 238 D~~~~~~~~~~~~~~~~~--~~i~Ni~~~--~~~si~e~~~~i~~~~g~~~ 284 (338)
T d1udca_ 238 DLADGHVVAMEKLANKPG--VHIYNLGAG--VGNSVLDVVNAFSKACGKPV 284 (338)
T ss_dssp HHHHHHHHHHHHHTTCCE--EEEEEESCS--SCEEHHHHHHHHHHHHTSCC
T ss_pred ehhhhccccccccccccC--cceeeecCC--CCCcHHHHHHHHHHHHCCCC
Confidence 999998887775433332 689999998 89999999999999998654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3.2e-32 Score=270.77 Aligned_cols=260 Identities=16% Similarity=0.069 Sum_probs=197.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|||||||||||++|+++|+++|++ |+++.|.+...... ......+.
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~---V~~~d~~~~~~~~~---------------------------~~~~~~~~ 63 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHY---VIASDWKKNEHMTE---------------------------DMFCDEFH 63 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCSSSCG---------------------------GGTCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEeCCCccchhh---------------------------hcccCcEE
Confidence 4789999999999999999999999975 47777655432110 01455778
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc----chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF----DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
.+|+. +.+....+++++|+|||+|+.... .........+|+.||.+++++|++. ++++|||+||+.++
T Consensus 64 ~~D~~-------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~ 135 (363)
T d2c5aa1 64 LVDLR-------VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIY 135 (363)
T ss_dssp ECCTT-------SHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGS
T ss_pred Eeech-------hHHHHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Cccccccccccccc
Confidence 89998 554455777899999999987655 3556778999999999999999998 89999999999999
Q ss_pred ccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHH
Q 037479 167 GEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGE 245 (492)
Q Consensus 167 ~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE 245 (492)
+.... ..+|...... ...+..+.+.|+.||..+|
T Consensus 136 ~~~~~~~~~~~~~~~~---------------------------------------------e~~~~~p~~~Yg~sK~~~E 170 (363)
T d2c5aa1 136 PEFKQLETTNVSLKES---------------------------------------------DAWPAEPQDAFGLEKLATE 170 (363)
T ss_dssp CGGGSSSSSSCEECGG---------------------------------------------GGSSBCCSSHHHHHHHHHH
T ss_pred cccccccccccccccc---------------------------------------------cCCcCCCCCHHHHHHHHHH
Confidence 86542 2222221110 1112357789999999999
Q ss_pred HHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 246 MFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 246 ~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
++++.+ ..+++++++||+.|||+.......+.. ............+......+++.+.+|+||++|+|++++.++.
T Consensus 171 ~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~ 248 (363)
T d2c5aa1 171 ELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREK--APAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK 248 (363)
T ss_dssp HHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCC--HHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeeeEeccCCcccccccc--cccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHh
Confidence 999877 348999999999999998744322211 2223333344444555677899999999999999999998876
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.. . +++||++++ .++|+.++++.+.+..++..
T Consensus 249 ~~---~---~~~~ni~~~--~~~s~~~l~~~i~~~~g~~~ 280 (363)
T d2c5aa1 249 SD---F---REPVNIGSD--EMVSMNEMAEMVLSFEEKKL 280 (363)
T ss_dssp SS---C---CSCEEECCC--CCEEHHHHHHHHHHTTTCCC
T ss_pred CC---C---CCeEEEecC--CcccHHHHHHHHHHHhCCCC
Confidence 32 1 678999999 89999999999999988764
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.3e-32 Score=268.46 Aligned_cols=269 Identities=21% Similarity=0.212 Sum_probs=200.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|++.|+ ..|+++.+.+.... ++. -.++++++.|
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~--~~V~~ld~~~~~~~---~~~-----------------------~~~~~~~i~~ 52 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAIS---RFL-----------------------NHPHFHFVEG 52 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGGG---GGT-----------------------TCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCCcchh---hhc-----------------------cCCCeEEEEC
Confidence 6899999999999999999999884 25788877543211 100 1367999999
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
|+++ ..+..+.+.+++|+|||+||..... ......+++|+.||.+++++|.+. ++ +++++||+.+++..
T Consensus 53 Di~~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~-~~~~~ss~~~~~~~ 124 (342)
T d2blla1 53 DISI------HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RK-RIIFPSTSEVYGMC 124 (342)
T ss_dssp CTTT------CSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEECCGGGGBTC
T ss_pred ccCC------hHHHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-cc-cccccccccccccc
Confidence 9985 3344445667899999999987643 334678999999999999999987 44 56788999998865
Q ss_pred ccc-eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 170 SGM-LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 170 ~~~-i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
... ..|. .+... ......+.+.|+.||.++|+++
T Consensus 125 ~~~~~~~~-~~~~~--------------------------------------------~~~~~~p~~~Y~~sK~~~E~~~ 159 (342)
T d2blla1 125 SDKYFDED-HSNLI--------------------------------------------VGPVNKPRWIYSVSKQLLDRVI 159 (342)
T ss_dssp CCSSBCTT-TCCCB--------------------------------------------CCCTTCGGGHHHHHHHHHHHHH
T ss_pred cccccccc-ccccc--------------------------------------------ccccCCCcchhhhcccchhhhh
Confidence 432 2221 11000 0001135578999999999999
Q ss_pred HHh--cCCCcEEEEeCCceecCCCCCCCccccC-cCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhh
Q 037479 249 EHL--KENMSVAIVRPTIITGTYKEPFPGWAEG-IRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAH 325 (492)
Q Consensus 249 ~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~ 325 (492)
..+ ..+++++++||+.++|+...+..+-... ......++..+..|....++++++..++++||+|+|+++..++...
T Consensus 160 ~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~ 239 (342)
T d2blla1 160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA 239 (342)
T ss_dssp HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred hhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhc
Confidence 887 3489999999999999976553322222 2345677778888888888999999999999999999999999854
Q ss_pred hcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCCC
Q 037479 326 AKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWI 365 (492)
Q Consensus 326 ~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~~ 365 (492)
..... +++||++++. +++|+.++++.+.+.+++.+..
T Consensus 240 ~~~~~--g~~~Nig~~~-~~~t~~~l~~~i~~~~~~~~~~ 276 (342)
T d2blla1 240 GNRCD--GEIINIGNPE-NEASIEELGEMLLASFEKHPLR 276 (342)
T ss_dssp GGTTT--TEEEEECCTT-SEEEHHHHHHHHHHHHHTCTTG
T ss_pred cccCC--CeEEEEeccc-chhHHHHHHHHHHHHhCCCccc
Confidence 33222 7899998762 5689999999999999977643
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.98 E-value=2.8e-31 Score=262.22 Aligned_cols=267 Identities=21% Similarity=0.293 Sum_probs=197.7
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|||||||||||++|+++|++.|++| +|+++.+...... ..+ .+.....+++++.
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v-~v~~~d~~~~~~~-~~~---------------------~~~~~~~~i~~~~ 58 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDV-HVTVLDKLTYAGN-KAN---------------------LEAILGDRVELVV 58 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTC-EEEEEECCCTTCC-GGG---------------------TGGGCSSSEEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCe-EEEEEeCCCcccc-HHH---------------------HHHhhcCCeEEEE
Confidence 5899999999999999999999999887 3444332222111 111 1122347899999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGE 168 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~ 168 (492)
+|++ +.+....++...+.|+|+|+..... .+....+++|+.||.++++.|++. + .++|++||..+||.
T Consensus 59 ~Di~-------d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~vyg~ 129 (346)
T d1oc2a_ 59 GDIA-------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEVYGD 129 (346)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGGCC
T ss_pred ccCC-------CHHHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceEecc
Confidence 9999 6677778889999999999977543 345678899999999999999987 4 57999999999975
Q ss_pred cccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 169 ESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 169 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
.. ..|.......... .. ........|.+.|+.||.++|+++
T Consensus 130 ~~--~~~~~~~~~~~~~--~~-----------------------------------~~e~~~~~p~s~Y~~sK~~~E~~~ 170 (346)
T d1oc2a_ 130 LP--LREDLPGHGEGPG--EK-----------------------------------FTAETNYNPSSPYSSTKAASDLIV 170 (346)
T ss_dssp BC--CGGGSTTTTCSTT--SS-----------------------------------BCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred cC--ccccccccccCcc--cc-----------------------------------cccCCCCCCCCHHHHHHHHHHHHH
Confidence 32 1222111000000 00 011112357789999999999999
Q ss_pred HHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 249 EHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 249 ~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
+.+ ..+++++++||++||||...+. .....++.....|....++++++..++++|++|+|++++.++.+..
T Consensus 171 ~~~~~~~~i~~~ilR~~~vyGp~~~~~-------~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~ 243 (346)
T d1oc2a_ 171 KAWVRSFGVKATISNCSNNYGPYQHIE-------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR 243 (346)
T ss_dssp HHHHHHHCCEEEEEEECCEESTTCCTT-------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCEEEEeecceeCCCCCcc-------chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhcc
Confidence 877 3589999999999999876331 2344556666677777888999999999999999999998877432
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
. ++.||++++ ++.++.++++.+.+.+++..
T Consensus 244 ~-----~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~ 273 (346)
T d1oc2a_ 244 M-----GETYLIGAD--GEKNNKEVLELILEKMGQPK 273 (346)
T ss_dssp T-----TCEEEECCS--CEEEHHHHHHHHHHHTTCCT
T ss_pred c-----Ccccccccc--ccccchHHHHHHHHHhCCCC
Confidence 2 779999999 89999999999999988643
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.97 E-value=2.5e-31 Score=262.17 Aligned_cols=283 Identities=16% Similarity=0.142 Sum_probs=195.7
Q ss_pred CCcccHHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchh
Q 037479 1 MELGSVLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLN 80 (492)
Q Consensus 1 ~~~~~~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~ 80 (492)
|||..+++ ||+|||||||||||++|+++|+++|++ |++++|+.+.. ..+. .+....
T Consensus 3 ~~~~~~~~---gk~VlVTG~sGfIGs~l~~~Ll~~G~~---V~~~vR~~~~~---~~~~----------~~~~~~----- 58 (342)
T d1y1pa1 3 IDNAVLPE---GSLVLVTGANGFVASHVVEQLLEHGYK---VRGTARSASKL---ANLQ----------KRWDAK----- 58 (342)
T ss_dssp STTCSSCT---TCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSHHHH---HHHH----------HHHHHH-----
T ss_pred CCCCCCCC---cCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEeCCchhH---HHHH----------Hhhhcc-----
Confidence 46666666 999999999999999999999999975 48899964321 1111 011100
Q ss_pred hhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 81 ALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
........+.+|+.+ .+....++.++|+|+|+|+...+.......+++|+.||.+++++|++.+++++|||+
T Consensus 59 -~~~~~~~~~~~Dl~~-------~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~ 130 (342)
T d1y1pa1 59 -YPGRFETAVVEDMLK-------QGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLT 130 (342)
T ss_dssp -STTTEEEEECSCTTS-------TTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEE
T ss_pred -ccccccEEEeccccc-------hhhhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhccccccccccc
Confidence 012345568899984 444557788999999999999888778888999999999999999998789999999
Q ss_pred eeceeecccc----c-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 161 STAFVWGEES----G-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 161 ST~~v~~~~~----~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
||+.+.+... + ..+|..++ .+...... ......+.++.+
T Consensus 131 SS~~~~~~~~~~~~~~~~~e~~~~------------~~~~~~~~------------------------~~~e~~~~~p~~ 174 (342)
T d1y1pa1 131 SSTVSALIPKPNVEGIYLDEKSWN------------LESIDKAK------------------------TLPESDPQKSLW 174 (342)
T ss_dssp CCGGGTCCCCTTCCCCEECTTCCC------------HHHHHHHH------------------------HSCTTSTTHHHH
T ss_pred ccceeeccCCCCCCCccccccccc------------cccccccc------------------------cccccCCCCCcC
Confidence 9976544321 1 12222211 11110000 011111223557
Q ss_pred hHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeeh
Q 037479 236 TYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPA 311 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~v 311 (492)
.|+.||..+|++++.+ ..++.++++||+.|+|+...|.. .......++..+..|..... ..+....++|||
T Consensus 175 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~----~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~v~v 249 (342)
T d1y1pa1 175 VYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET----QSGSTSGWMMSLFNGEVSPA-LALMPPQYYVSA 249 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT----CCCHHHHHHHHHHTTCCCHH-HHTCCSEEEEEH
T ss_pred cccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccc----cccchHHHHHHHHcCCcCcc-cCCccceeeeeH
Confidence 8999999999988766 34689999999999998654422 11234556666666654322 334556789999
Q ss_pred hhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 312 DMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 312 ddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+|+|++++.++.+. .. +..|+++++ .++|+.|+++.+.+.++...
T Consensus 250 ~Dva~~~i~~l~~~-~~----~g~~~~~~~--~~~t~~eia~~i~k~~p~~~ 294 (342)
T d1y1pa1 250 VDIGLLHLGCLVLP-QI----ERRRVYGTA--GTFDWNTVLATFRKLYPSKT 294 (342)
T ss_dssp HHHHHHHHHHHHCT-TC----CSCEEEECC--EEECHHHHHHHHHHHCTTSC
T ss_pred HHHHHHHHHhhcCc-cc----cceEEEEcC--CceEHHHHHHHHHHHcCCCc
Confidence 99999999998742 22 344667777 78999999999999875443
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2e-30 Score=256.16 Aligned_cols=271 Identities=17% Similarity=0.155 Sum_probs=189.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHH-HHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSAT-VRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~-~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
|.|||||||||||++|+++|++.|++ |+++.|........ .+.. .....+++++.
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~---V~~~d~~~~~~~~~~~~~~---------------------~~~~~~v~~~~ 57 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYD---CVVADNLSNSTYDSVARLE---------------------VLTKHHIPFYE 57 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTHHHHHHH---------------------HHHTSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCe---EEEEECCCCcchhHHHhHH---------------------hhcccCCeEEE
Confidence 67999999999999999999999974 57777654433211 1111 11236789999
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceee
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVW 166 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~ 166 (492)
+|++ +.+.++.+++ ++|+|||+||..... +....+..+|+.||.+++++|++. ++++|||+||..||
T Consensus 58 ~Dl~-------d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vy 129 (347)
T d1z45a2 58 VDLC-------DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVY 129 (347)
T ss_dssp CCTT-------CHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred eecC-------CHHHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeee
Confidence 9999 5555556555 799999999986532 445678899999999999999997 89999999999999
Q ss_pred cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 167 GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 167 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
|...+...+..+++.. +..+.+.|+.||.++|+
T Consensus 130 g~~~~~~~~~~~~e~~-----------------------------------------------~~~p~~~Y~~sK~~~E~ 162 (347)
T d1z45a2 130 GDATRFPNMIPIPEEC-----------------------------------------------PLGPTNPYGHTKYAIEN 162 (347)
T ss_dssp CCGGGSTTCCSBCTTS-----------------------------------------------CCCCCSHHHHHHHHHHH
T ss_pred cCcccCCCCCcccccc-----------------------------------------------CCCCCChhHhHHHHHHH
Confidence 9765332222222211 12567899999999999
Q ss_pred HHHHh----cCCCcEEEEeCCceecCCCCCCCccccC--cCchHHHHHhcc--CceeeEEecCC------Ccccceeehh
Q 037479 247 FIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEG--IRTIDSLAVGYG--KGRLTCFLGDV------KGIVDVIPAD 312 (492)
Q Consensus 247 ~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~--~~~~~~~~~~~~--~g~~~~~~~~~------~~~~d~v~vd 312 (492)
+++++ ..+++++++||+.|||+...+.-|.... .......+.... .+....+.+++ ....|++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~ 242 (347)
T d1z45a2 163 ILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV 242 (347)
T ss_dssp HHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHH
T ss_pred HHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeee
Confidence 99876 3579999999999999876543332111 122333333322 23333344444 4456777777
Q ss_pred hhhhHHHHHHHhhhcC--CCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCC
Q 037479 313 MVVNAIVVAVVAHAKQ--PSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPW 364 (492)
Q Consensus 313 dva~~ii~~~~~~~~~--~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~ 364 (492)
+++.+++.++...... ....+++||++++ +++|+.|+++.+.+.+|....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~--~~~s~~e~~~~i~~~~~~~~~ 294 (347)
T d1z45a2 243 DLAKGHIAALQYLEAYNENEGLCREWNLGSG--KGSTVFEVYHAFCKASGIDLP 294 (347)
T ss_dssp HHHHHHHHHHHHHHHSCTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTCCCC
T ss_pred cccccccccccccccccccccccccceecCC--CcccHHHHHHHHHHHHCCCCc
Confidence 7778888777643211 1111679999998 899999999999999987653
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=5e-31 Score=264.97 Aligned_cols=280 Identities=16% Similarity=0.127 Sum_probs=192.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE---ecC-----------CCcCHHHHHHHHhhcChhhHHHHHhcCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL---RAA-----------DAKSATVRFHNEIIGKDLFRVLKEKNGT 77 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv---R~~-----------~~~~~~~r~~~~~~~~~~f~~l~~~~~~ 77 (492)
||+|||||||||||++|+++|++.|++| +++. |+. ......+++. ++.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V---~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~----- 62 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEV---CIVDNLVRRLFDHQLGLESLTPIASIHDRIS----------RWK----- 62 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEE---EEEECCHHHHHHHHHTCCCSSCCCCHHHHHH----------HHH-----
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEE---EEEecCCcccccccccccccccccchHHHHH----------HHH-----
Confidence 7999999999999999999999999865 5552 221 1111111111 111
Q ss_pred chhhhccCceEEEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc------hhHHHHHHHhHHHHHHHHHHHH
Q 037479 78 HLNALISEKITLVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD------ERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 78 ~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~------~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
....++++++.||++ +.+.++.+++ ++|+|||+||..... ......+++|+.||.+++++|+
T Consensus 63 ---~~~~~~i~~~~~Dl~-------d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~ 132 (393)
T d1i24a_ 63 ---ALTGKSIELYVGDIC-------DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIK 132 (393)
T ss_dssp ---HHHCCCCEEEESCTT-------SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---hhcCCCcEEEEccCC-------CHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHH
Confidence 112368999999999 6666767776 569999999975432 2345678999999999999999
Q ss_pred hcccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 150 KCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 150 ~~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
+.+..+.|+++||+.+++.......|...+....... -+...
T Consensus 133 ~~~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~ 174 (393)
T d1i24a_ 133 EFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRT--------------------------------------DTLPY 174 (393)
T ss_dssp HHCTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEE--------------------------------------EEEEC
T ss_pred Hhccccceeeccccccccccccccccccccccccccc--------------------------------------ccccc
Confidence 9855567888998888876543333332211100000 00011
Q ss_pred cCCCCchHHHHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCCC--ccc----cC--c--CchHHHHHhccCceeeE
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPFP--GWA----EG--I--RTIDSLAVGYGKGRLTC 297 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~--gw~----~~--~--~~~~~~~~~~~~g~~~~ 297 (492)
+..+.+.|+.||.++|.++..+ ..+++++++||+.|||+...+.. +.. .. . ..+..++.....|....
T Consensus 175 ~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 254 (393)
T d1i24a_ 175 PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLT 254 (393)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEE
T ss_pred ccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeE
Confidence 2256789999999999999876 45899999999999999864421 110 00 0 12455666777888888
Q ss_pred EecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEe-cCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 298 FLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQV-GSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 298 ~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i-~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+.+++.+.+|++||+|+|++++.++++... . +..+.+ .++ +++|+.++++.+.+..+..+
T Consensus 255 i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~-~---g~~~~~~~~~--~~~si~el~~~i~~~~~~~~ 315 (393)
T d1i24a_ 255 VYGKGGQTRGYLDIRDTVQCVEIAIANPAK-A---GEFRVFNQFT--EQFSVNELASLVTKAGSKLG 315 (393)
T ss_dssp EETTSCCEEEEEEHHHHHHHHHHHHHSCCC-T---TCEEEEEECS--EEEEHHHHHHHHHHHHHTTT
T ss_pred EeeecccccccccccchHHHHHHHHHhhcc-c---ceeeeecCCC--CeeEHHHHHHHHHHHHHhhC
Confidence 899999999999999999999999974322 1 222222 233 67999999999988876543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3e-30 Score=254.73 Aligned_cols=268 Identities=19% Similarity=0.201 Sum_probs=191.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC----cCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA----KSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~----~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
|+|||||||||||++|+++|++.|++| +++.|.... ....+++. .+. .....++.
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V---~~ld~~~~~~~~~~~~~~~~~----------~~~--------~~~~~~~~ 61 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLP---VVIDNFHNAFRGGGSLPESLR----------RVQ--------ELTGRSVE 61 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCE---EEEECSSSSCBCSSSSBHHHH----------HHH--------HHHTCCCE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEE---EEEECCCccccccccchHHHH----------HHH--------HhcCCCcE
Confidence 699999999999999999999999865 777652221 11111111 000 11237899
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeec
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTA 163 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~ 163 (492)
++.+|++ +.+.++.++. .+++|+|+||..+.. ..+...+++|+.||.+++++|++. ++++|||+||+
T Consensus 62 ~~~~Dl~-------d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ss~ 133 (346)
T d1ek6a_ 62 FEEMDIL-------DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSA 133 (346)
T ss_dssp EEECCTT-------CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEG
T ss_pred EEEeecc-------ccccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Ccccccccccc
Confidence 9999999 5555556554 577899999976543 345678999999999999999998 89999999999
Q ss_pred eeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 164 FVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 164 ~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
.+++.......+...+ ...+.++|+.+|..
T Consensus 134 ~~~~~~~~~~~~~~~~--------------------------------------------------~~~~~~~Y~~~k~~ 163 (346)
T d1ek6a_ 134 TVYGNPQYLPLDEAHP--------------------------------------------------TGGCTNPYGKSKFF 163 (346)
T ss_dssp GGGCSCSSSSBCTTSC--------------------------------------------------CCCCSSHHHHHHHH
T ss_pred eeeecccccccccccc--------------------------------------------------ccccCChHHHHHHH
Confidence 9998754222221111 11466899999999
Q ss_pred HHHHHHHh---cCCCcEEEEeCCceecCCCCCCCccccC-c-CchHHHHH--hccCceeeEEe------cCCCcccceee
Q 037479 244 GEMFIEHL---KENMSVAIVRPTIITGTYKEPFPGWAEG-I-RTIDSLAV--GYGKGRLTCFL------GDVKGIVDVIP 310 (492)
Q Consensus 244 aE~~v~~~---~~~~~~~ivRPs~v~g~~~~p~~gw~~~-~-~~~~~~~~--~~~~g~~~~~~------~~~~~~~d~v~ 310 (492)
+|+.+.++ ..+++.+++||+.+||+......|.... . ......+. ...++....+. .++.+.+|++|
T Consensus 164 ~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~ 243 (346)
T d1ek6a_ 164 IEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIH 243 (346)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEE
T ss_pred HHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEE
Confidence 99999876 3589999999999999976543322211 1 12222222 23334433333 34667789999
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
++|+|.++..++........ +++||++++ +++++.|+++.+.+.++...
T Consensus 244 v~D~a~~~~~~~~~~~~~~~--~~i~Ni~~~--~~~s~~dl~~~i~~~~~~~~ 292 (346)
T d1ek6a_ 244 VVDLAKGHIAALRKLKEQCG--CRIYNLGTG--TGYSVLQMVQAMEKASGKKI 292 (346)
T ss_dssp HHHHHHHHHHHHHHHTTTCC--EEEEEECCS--CCEEHHHHHHHHHHHHCSCC
T ss_pred EEeccchhhhhccccccccC--ceEEEeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 99999999888765443332 689999998 89999999999999999764
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=1.9e-30 Score=253.22 Aligned_cols=255 Identities=16% Similarity=0.141 Sum_probs=192.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|++.|++.|++ |+++.|...... .+++.. + ...++++++.+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~---V~~~~r~~~~~~-~~~l~~-~-------------------~~~~~~~~~~~ 56 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYR---VHGLVARRSSDT-RWRLRE-L-------------------GIEGDIQYEDG 56 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CHHHHH-T-------------------TCGGGEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCCCccc-HHHHHH-h-------------------cccCCcEEEEc
Confidence 68999999999999999999999974 589998754432 233321 0 01367999999
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+.....+. ..++++|+|+..... ++....+++|+.||.+++++|++.+..++|+++||+.++|
T Consensus 57 Dl~-------d~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~ 129 (321)
T d1rpna_ 57 DMA-------DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFG 129 (321)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred ccc-------ChHHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcC
Confidence 999 4444444444 577999998876543 4467889999999999999999985566899999999987
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
.... ..+|+. +..+.+.|+.||.++|+
T Consensus 130 ~~~~~~~~E~~----------------------------------------------------~~~p~~~Y~~sK~~~E~ 157 (321)
T d1rpna_ 130 LIQAERQDENT----------------------------------------------------PFYPRSPYGVAKLYGHW 157 (321)
T ss_dssp SCSSSSBCTTS----------------------------------------------------CCCCCSHHHHHHHHHHH
T ss_pred cccCCCCCCCC----------------------------------------------------CccccChhHHHHHHHHH
Confidence 6542 222221 12567899999999999
Q ss_pred HHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCce-eeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 247 FIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGR-LTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 247 ~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
++..+ ..+++++++||+.||||...+ . +.. ..+..++.....|. .....+++++.+|++||+|+|++++.++.
T Consensus 158 ~~~~~~~~~~~~~~~lr~~~vyGp~~~~-~-~~~--~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~ 233 (321)
T d1rpna_ 158 ITVNYRESFGLHASSGILFNHESPLRGI-E-FVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQ 233 (321)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTSCT-T-SHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCcEEEEEEecccCCCccc-c-ccH--HHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHh
Confidence 99887 458999999999999987532 1 111 12334444444443 44567999999999999999999999987
Q ss_pred hhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 324 AHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+. . .+.||++++ ++.++.++++.+.+.++..
T Consensus 234 ~~-~-----~~~~ni~~~--~~~s~~~~~~~~~~~~~~~ 264 (321)
T d1rpna_ 234 QD-K-----ADDYVVATG--VTTTVRDMCQIAFEHVGLD 264 (321)
T ss_dssp SS-S-----CCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred cC-C-----cCCceeccc--ccceehhhhHHHHHHhCCC
Confidence 42 1 567999998 8999999999999988764
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.5e-30 Score=255.24 Aligned_cols=262 Identities=17% Similarity=0.156 Sum_probs=187.7
Q ss_pred CEE-EEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 13 KTI-LVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 13 ~~v-lITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
|+| ||||||||||++|+++|++.|++ |++++|....... .++. .+... .......+++++.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~---V~~i~r~~~~~~~-~~~~-~~~~~-------------~~~~~~~~~~~~~ 62 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYE---VHGIVRRSSSFNT-GRIE-HLYKN-------------PQAHIEGNMKLHY 62 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCCC-TTTG-GGC----------------------CEEEEE
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCE---EEEEECCCcccch-hhHH-HHhhc-------------hhhhccCCcEEEE
Confidence 567 99999999999999999999974 5899986432111 0110 00000 0011236789999
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcc--cceeEEEeeece
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCA--KLIVLVHVSTAF 164 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~~V~vST~~ 164 (492)
+|++ +.+....++. ++++|+|+||..... +.....+++|+.||.+++++|+++. +.++|||+||+.
T Consensus 63 ~Dl~-------d~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~ 135 (347)
T d1t2aa_ 63 GDLT-------DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE 135 (347)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred eecC-------CchhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh
Confidence 9999 5555556654 678999999876543 4556678999999999999999873 345899999999
Q ss_pred eeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 165 VWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 165 v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
|||.... .++|+. +..|.+.|+.||..
T Consensus 136 vyg~~~~~~~~E~~----------------------------------------------------~~~P~~~Yg~sK~~ 163 (347)
T d1t2aa_ 136 LYGKVQEIPQKETT----------------------------------------------------PFYPRSPYGAAKLY 163 (347)
T ss_dssp GTCSCSSSSBCTTS----------------------------------------------------CCCCCSHHHHHHHH
T ss_pred eecCCCCCCCCCCC----------------------------------------------------CCCCCCHHHHHHHH
Confidence 9986432 233322 11567899999999
Q ss_pred HHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHH
Q 037479 244 GEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVA 321 (492)
Q Consensus 244 aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~ 321 (492)
||++++.+ ..+++++++||+.|||+...+... .. .....++.....+......+++.+.+++++|+|+|++++.+
T Consensus 164 aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~--~~-~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~ 240 (347)
T d1t2aa_ 164 AYWIVVNFREAYNLFAVNGILFNHESPRRGANFV--TR-KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM 240 (347)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSH--HH-HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEecceeCCCCCCCcc--cc-ccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHH
Confidence 99999876 458999999999999987643210 00 11122333333445556778999999999999999999999
Q ss_pred HHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcC
Q 037479 322 VVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKK 362 (492)
Q Consensus 322 ~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~ 362 (492)
+.+.. .+.|+++.. ...++.+.........++.
T Consensus 241 ~~~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 273 (347)
T d1t2aa_ 241 LQNDE------PEDFVIATG--EVHSVREFVEKSFLHIGKT 273 (347)
T ss_dssp HHSSS------CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred hhcCC------Cccceeccc--cccccchhhhhhhhhhcce
Confidence 87432 346888887 7899999999998888865
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.97 E-value=2e-29 Score=252.31 Aligned_cols=286 Identities=13% Similarity=0.132 Sum_probs=191.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHh-hCCCCCeEEEEEe---cCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 11 ENKTILVTGATGFLAKIFVEKILR-VQPNVKKLYLLLR---AADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~-~g~~V~~i~~lvR---~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
++|+|||||||||||++|+++||+ .|+ .|+++.+ +.......+... + ..+................
T Consensus 1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~---~V~~~D~l~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~ 70 (383)
T d1gy8a_ 1 SHMRVLVCGGAGYIGSHFVRALLRDTNH---SVVIVDSLVGTHGKSDHVETRE-N------VARKLQQSDGPKPPWADRY 70 (383)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCCC---EEEEEECCTTTTTCCTTSCCHH-H------HHHHHHHSCSSCCTTTTCC
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHhCCC---EEEEEecCCcccccchhhhhhh-h------HHHHhhhhccccccccccc
Confidence 368999999999999999999997 465 4577643 322221111111 0 0001111111112223467
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhcc---CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWN---KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
+.++.||++ +.+.++.+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++++++++
T Consensus 71 ~~~~~~Di~-------d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~ 142 (383)
T d1gy8a_ 71 AALEVGDVR-------NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFS 142 (383)
T ss_dssp CEEEESCTT-------CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred eEEEECccc-------CHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCcccccc
Confidence 899999999 5555556554 689999999987653 345677899999999999999998 88999999
Q ss_pred eeceeeccccc-c--eeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchH
Q 037479 161 STAFVWGEESG-M--LYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTY 237 (492)
Q Consensus 161 ST~~v~~~~~~-~--i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y 237 (492)
||..+++.... . .++.+..+. ....|.+.|
T Consensus 143 ~s~~~~~~~~~~~~~~~~~~~~e~-----------------------------------------------~~~~p~~~Y 175 (383)
T d1gy8a_ 143 SSAAIFGNPTMGSVSTNAEPIDIN-----------------------------------------------AKKSPESPY 175 (383)
T ss_dssp EEGGGTBSCCC-----CCCCBCTT-----------------------------------------------SCCBCSSHH
T ss_pred cccccccccccccccccccccccc-----------------------------------------------cCCCCCCHH
Confidence 99988876432 1 111222211 122577899
Q ss_pred HHHHHHHHHHHHHh--cCCCcEEEEeCCceecCCCCCC-CccccCcCchHH-HHH----hc------------cCceeeE
Q 037479 238 VFTKVMGEMFIEHL--KENMSVAIVRPTIITGTYKEPF-PGWAEGIRTIDS-LAV----GY------------GKGRLTC 297 (492)
Q Consensus 238 ~~sK~~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~-~gw~~~~~~~~~-~~~----~~------------~~g~~~~ 297 (492)
+.||..+|++++.+ ..+++++++||+.|||+...+. ..+..+.....+ ++. .. ..+....
T Consensus 176 ~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (383)
T d1gy8a_ 176 GESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMP 255 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEE
T ss_pred HhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceE
Confidence 99999999999987 4589999999999999987542 223222222211 111 11 1122222
Q ss_pred Ee------cCCCcccceeehhhhhhHHHHHHHhhhcCC----CCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 298 FL------GDVKGIVDVIPADMVVNAIVVAVVAHAKQP----SDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 298 ~~------~~~~~~~d~v~vddva~~ii~~~~~~~~~~----~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+. +++.+.+|++||+|+|++++.++....... ...+++||++++ +++|+.|+++.+.+.++...
T Consensus 256 i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~--~~~s~~el~~~i~~~~~~~~ 329 (383)
T d1gy8a_ 256 IFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHPI 329 (383)
T ss_dssp EECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCCC
T ss_pred EeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCC--CceeHHHHHHHHHHHhCCCC
Confidence 33 346778899999999999999987532210 001579999999 89999999999999988654
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=5e-29 Score=244.96 Aligned_cols=263 Identities=17% Similarity=0.152 Sum_probs=186.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|++||||||||||++|++.|++.|++ |++++|..+.... +++. .+... ........+.++.
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~---V~~~~r~~~~~~~-~~~~-~~~~~-------------~~~~~~~~~~~~~ 62 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYE---VHGLIRRSSNFNT-QRIN-HIYID-------------PHNVNKALMKLHY 62 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCCC-TTTT-TTC---------------------CCEEEEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCE---EEEEECCCcccch-hhhh-hhhhh-------------hhhccccceEEEE
Confidence 489999999999999999999999974 5899996542111 0100 00000 0011136688999
Q ss_pred cCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcc----cceeEEEeee
Q 037479 92 GDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCA----KLIVLVHVST 162 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~----~~~~~V~vST 162 (492)
+|++ +.+.....++ ++|+|||+||..... +.+...+.+|+.|+.++++++++.. ...++++.||
T Consensus 63 ~Di~-------~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss 135 (339)
T d1n7ha_ 63 ADLT-------DASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS 135 (339)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred cccc-------CHHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeeccc
Confidence 9999 5444545554 689999999987654 4566789999999999999998642 2346888999
Q ss_pred ceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHH
Q 037479 163 AFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKV 242 (492)
Q Consensus 163 ~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~ 242 (492)
+++++.....++|... ..+.+.|+.||.
T Consensus 136 ~~~~~~~~~~~~E~~~----------------------------------------------------~~p~~~Y~~sK~ 163 (339)
T d1n7ha_ 136 SEMFGSTPPPQSETTP----------------------------------------------------FHPRSPYAASKC 163 (339)
T ss_dssp GGGGTTSCSSBCTTSC----------------------------------------------------CCCCSHHHHHHH
T ss_pred ceecccCCCCCCCCCC----------------------------------------------------CCCcchhhHHHH
Confidence 9888776544444321 256789999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccC-ceeeEEecCCCcccceeehhhhhhHHH
Q 037479 243 MGEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGK-GRLTCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 243 ~aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~d~v~vddva~~ii 319 (492)
.+|+++..+ ..+++++++||+.||||...+ ++.. ..+...+..... +....+.+++.+.+|++||+|+|+++.
T Consensus 164 ~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~--~~~~--~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~ 239 (339)
T d1n7ha_ 164 AAHWYTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMW 239 (339)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEEccccCCCCCC--CCCc--chhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHH
Confidence 999999877 458999999999999987532 1111 112222222222 233456689999999999999999999
Q ss_pred HHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.++.... ...++++.+ .+.++.++++.+.+.++...
T Consensus 240 ~~~~~~~------~~~~~~~~~--~~~s~~~~~~~~~~~~~~~~ 275 (339)
T d1n7ha_ 240 LMLQQEK------PDDYVVATE--EGHTVEEFLDVSFGYLGLNW 275 (339)
T ss_dssp HHHTSSS------CCEEEECCS--CEEEHHHHHHHHHHHTTCCG
T ss_pred HHHhcCC------CCccccccc--cccccchhhhhhhhhhhccc
Confidence 9887422 345666666 78999999999999988653
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=6.1e-29 Score=241.90 Aligned_cols=251 Identities=12% Similarity=0.096 Sum_probs=181.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|||||||||||++|+++|++.|+.| +++.+..
T Consensus 1 ~kkkIlITG~tGfiG~~l~~~L~~~g~~v---i~~~~~~----------------------------------------- 36 (315)
T d1e6ua_ 1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVE---LVLRTRD----------------------------------------- 36 (315)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEE---EECCCTT-----------------------------------------
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCcCEE---EEecCch-----------------------------------------
Confidence 46899999999999999999999998643 3332211
Q ss_pred ecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc----hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeece
Q 037479 91 PGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD----ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAF 164 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~ 164 (492)
..|+. +.+....+++ ++|+|+|+|+.+... ......+++|+.||.+++++|++. ++++|||+||..
T Consensus 37 ~~~~~-------~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~ 108 (315)
T d1e6ua_ 37 ELNLL-------DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSC 108 (315)
T ss_dssp TCCTT-------CHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGG
T ss_pred hcccc-------CHHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCce
Confidence 13455 3444445544 689999999876542 345667899999999999999998 899999999999
Q ss_pred eeccccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHH
Q 037479 165 VWGEESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVM 243 (492)
Q Consensus 165 v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~ 243 (492)
|||.... .++|....+.. +..+.+.|+.||..
T Consensus 109 vyg~~~~~~~~E~~~~~~~-----------------------------------------------~~~~~~~Y~~sK~~ 141 (315)
T d1e6ua_ 109 IYPKLAKQPMAESELLQGT-----------------------------------------------LEPTNEPYAIAKIA 141 (315)
T ss_dssp GSCTTCCSSBCGGGTTSSC-----------------------------------------------CCGGGHHHHHHHHH
T ss_pred EcCCCCCCCccCCccccCC-----------------------------------------------CCCCCCHHHHHHHH
Confidence 9986542 34554322110 00123479999999
Q ss_pred HHHHHHHh--cCCCcEEEEeCCceecCCCCCCCcc--ccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHH
Q 037479 244 GEMFIEHL--KENMSVAIVRPTIITGTYKEPFPGW--AEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 244 aE~~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii 319 (492)
+|++++.+ ..+++++|+||+.||||........ +...............+......+++...+++++++|++.++.
T Consensus 142 ~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~ 221 (315)
T d1e6ua_ 142 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI 221 (315)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHH
Confidence 99999987 3489999999999999976432211 1111122223444555666677889999999999999999999
Q ss_pred HHHHhhhc-----CCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 320 VAVVAHAK-----QPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 320 ~~~~~~~~-----~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.++..... .... ...++++++ .+.+..++.+.+.+.++...
T Consensus 222 ~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~i~~~~~~i~~~~~~~~ 267 (315)
T d1e6ua_ 222 HVMELAHEVWLENTQPM-LSHINVGTG--VDCTIRELAQTIAKVVGYKG 267 (315)
T ss_dssp HHHHSCHHHHHHTSBTT-BCCEEESCS--CCEEHHHHHHHHHHHHTCCS
T ss_pred Hhhhhcccccccccccc-ccccccCCC--cchHHHHHHHHHHHHhCCCc
Confidence 88864221 1111 568999988 88999999999999988654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.95 E-value=1.6e-27 Score=233.61 Aligned_cols=275 Identities=16% Similarity=0.186 Sum_probs=186.7
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+|||||||||||++|+++|+++|++| +++.|-.... ..+++.. +. ...+++++.||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V---~~id~~~~~~-~~~~~~~----------~~----------~~~~~~~i~~D 57 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDL---IVFDNLSRKG-ATDNLHW----------LS----------SLGNFEFVHGD 57 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEE---EEEECCCSTT-HHHHHHH----------HH----------TTCCCEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEE---EEEECCCccc-chhHHHH----------hh----------ccCCcEEEEcc
Confidence 79999999999999999999999754 6765432221 1222220 00 12678999999
Q ss_pred CCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee-ceeec
Q 037479 94 ITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST-AFVWG 167 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST-~~v~~ 167 (492)
++ +.+.+..+++ ++|+|||+||.+... .+....+++|+.||.+|+++|.+. +++++|+.|| ..+++
T Consensus 58 i~-------~~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~ 129 (338)
T d1orra_ 58 IR-------NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYG 129 (338)
T ss_dssp TT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGT
T ss_pred cC-------CHHHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccc
Confidence 99 5555556666 469999999987654 345788999999999999999998 5555555555 44444
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
.... ...+......... .+.. .....+..+.+.|+.+|..+|.
T Consensus 130 ~~~~~~~~~~~~~~~~~~---~~~~---------------------------------~~~~~~~~~~~~y~~~k~~~e~ 173 (338)
T d1orra_ 130 DLEQYKYNETETRYTCVD---KPNG---------------------------------YDESTQLDFHSPYGCSKGAADQ 173 (338)
T ss_dssp TCTTSCEEECSSCEEETT---CTTC---------------------------------BCTTSCCCCCHHHHHHHHHHHH
T ss_pred cccccccccccccccccc---cccC---------------------------------cccCCccccccccccccchhhh
Confidence 3321 1111100000000 0000 0011123567899999999999
Q ss_pred HHHHh--cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHh-----ccCceeeEEecCCCcccceeehhhhhhHHH
Q 037479 247 FIEHL--KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVG-----YGKGRLTCFLGDVKGIVDVIPADMVVNAIV 319 (492)
Q Consensus 247 ~v~~~--~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~d~v~vddva~~ii 319 (492)
++..+ ..++...++|++.++++...+.... .....++.. ...+....+.+++...+|++||+|+|++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~ 249 (338)
T d1orra_ 174 YMLDYARIFGLNTVVFRHSSMYGGRQFATYDQ----GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYF 249 (338)
T ss_dssp HHHHHHHHHCCEEEEEEECCEECTTCCCBTTB----CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHH
T ss_pred hhhhhhhccCcccccccccceeeccccccccc----cccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHH
Confidence 98876 4589999999999998776332110 112223222 234556678899999999999999999999
Q ss_pred HHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 320 VAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 320 ~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.++....... +++||+..+..+++++.|+++.+.+..+..+
T Consensus 250 ~~l~~~~~~~---~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~ 290 (338)
T d1orra_ 250 TALANVSKIR---GNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 290 (338)
T ss_dssp HHHHTHHHHT---TCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred HHHhcccccc---CccccccccccccccHHHHHHHHHHHHCCCc
Confidence 9987543333 7899997665588999999999999988765
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.2e-27 Score=222.40 Aligned_cols=211 Identities=16% Similarity=0.110 Sum_probs=158.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|++|+|||||||||+|++|+++|+++| .+++|++++|++...... ...++..
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g-~~~~v~~~~R~~~~~~~~---------------------------~~~~i~~ 63 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLTFDEE---------------------------AYKNVNQ 63 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCCCCSG---------------------------GGGGCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CCCEEEEEecChhhhccc---------------------------ccceeee
Confidence 678999999999999999999999998 456899999976543211 1256788
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
..+|+. +.+....+++++|+|||||+..........+.++|+.++.+++++|++. ++++|||+||..++..
T Consensus 64 ~~~D~~-------~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~~- 134 (232)
T d2bkaa1 64 EVVDFE-------KLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKS- 134 (232)
T ss_dssp EECCGG-------GGGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred eeeccc-------ccccccccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccCCccccccC-
Confidence 889988 4444557788999999999987666667788999999999999999998 8999999999876532
Q ss_pred ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 170 SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 170 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
..+.|+.+|..+|+.+.
T Consensus 135 ---------------------------------------------------------------~~~~Y~~~K~~~E~~l~ 151 (232)
T d2bkaa1 135 ---------------------------------------------------------------SNFLYLQVKGEVEAKVE 151 (232)
T ss_dssp ---------------------------------------------------------------CSSHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------ccchhHHHHHHhhhccc
Confidence 34689999999999998
Q ss_pred HhcCCCc-EEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcC
Q 037479 250 HLKENMS-VAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 250 ~~~~~~~-~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~ 328 (492)
+ .+++ ++|+||+.|+|+.... +....++..+..+ ...+......||++|+|++++.++.....
T Consensus 152 ~--~~~~~~~IlRP~~i~G~~~~~--------~~~~~~~~~~~~~-----~~~~~~~~~~I~~~dvA~a~i~~~~~~~~- 215 (232)
T d2bkaa1 152 E--LKFDRYSVFRPGVLLCDRQES--------RPGEWLVRKFFGS-----LPDSWASGHSVPVVTVVRAMLNNVVRPRD- 215 (232)
T ss_dssp T--TCCSEEEEEECCEEECTTGGG--------SHHHHHHHHHHCS-----CCTTGGGGTEEEHHHHHHHHHHHHTSCCC-
T ss_pred c--ccccceEEecCceeecCCCcC--------cHHHHHHHHHhhc-----cCCcccCCCeEEHHHHHHHHHHHHhcCcc-
Confidence 7 3554 8999999999987642 1111222222111 12233344579999999999988864322
Q ss_pred CCCCCcEEEecC
Q 037479 329 PSDVNNIYQVGS 340 (492)
Q Consensus 329 ~~~~~~iy~i~~ 340 (492)
++++.+++
T Consensus 216 ----~~~~i~~~ 223 (232)
T d2bkaa1 216 ----KQMELLEN 223 (232)
T ss_dssp ----SSEEEEEH
T ss_pred ----CCeEEEcH
Confidence 55666654
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.95 E-value=4.1e-27 Score=232.77 Aligned_cols=268 Identities=13% Similarity=0.148 Sum_probs=191.8
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
.+||+||+|||||||||||++|+++|++.|++ |+++.|.......... .. ...++
T Consensus 3 ~~~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~---V~~~~r~~~~~~~~~~------------~~----------~~~~~ 57 (356)
T d1rkxa_ 3 NSFWQGKRVFVTGHTGFKGGWLSLWLQTMGAT---VKGYSLTAPTVPSLFE------------TA----------RVADG 57 (356)
T ss_dssp HHHHTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCSSSSCHHH------------HT----------TTTTT
T ss_pred hhhhCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCccHHHHh------------hh----------hcccC
Confidence 47999999999999999999999999999974 5899997654332111 00 01367
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEee
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVS 161 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vS 161 (492)
++++.||++ +.+.+..+.+ .+|+|+|+||..... +.+.....+|+.|+.+++++|++.+..+.+++.|
T Consensus 58 i~~~~~Dl~-------d~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s 130 (356)
T d1rkxa_ 58 MQSEIGDIR-------DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT 130 (356)
T ss_dssp SEEEECCTT-------CHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred CeEEEeecc-------ChHhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccc
Confidence 999999999 5555556655 679999999976442 4567789999999999999999986666777777
Q ss_pred eceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHH
Q 037479 162 TAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTK 241 (492)
Q Consensus 162 T~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK 241 (492)
|+.++........++ +. .+..+.+.|+.+|
T Consensus 131 ~~~~~~~~~~~~~~~---~~-----------------------------------------------~~~~p~~~y~~~k 160 (356)
T d1rkxa_ 131 SDKCYDNKEWIWGYR---EN-----------------------------------------------EAMGGYDPYSNSK 160 (356)
T ss_dssp CGGGBCCCCSSSCBC---TT-----------------------------------------------SCBCCSSHHHHHH
T ss_pred ccccccccccccccc---cc-----------------------------------------------cccCCCCcccccc
Confidence 776665433211111 00 0114678999999
Q ss_pred HHHHHHHHHh-----------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 242 VMGEMFIEHL-----------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 242 ~~aE~~v~~~-----------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
..+|..+..+ ..+++++++||+.|||+.+.+.. ..+..++.... +......+.+....++++
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~------~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 233 (356)
T d1rkxa_ 161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD------RIVPDILRAFE-QSQPVIIRNPHAIRPWQH 233 (356)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS------CHHHHHHHHHH-TTCCEECSCTTCEECCEE
T ss_pred ccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhh------HHHHHHHHHHh-CCCceEEeeccccccccc
Confidence 9999888754 23689999999999998763321 22333444443 344456788999999999
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
|+|+|.+++.++..........+...+...+....+++.++.+.+.+.++..+
T Consensus 234 v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 286 (356)
T d1rkxa_ 234 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA 286 (356)
T ss_dssp THHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred cccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCc
Confidence 99999999988876432211102344444433378999999999999998765
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.93 E-value=3.2e-25 Score=211.43 Aligned_cols=223 Identities=21% Similarity=0.208 Sum_probs=170.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|+++|.+.|++| +++.|++ +
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~V---i~~~r~~------------------------------------------~ 36 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEV---IPTDVQD------------------------------------------L 36 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEE---EEECTTT------------------------------------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE---EEeechh------------------------------------------c
Confidence 789999999999999999999999744 6665531 3
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+.++.+++ ++|+|||+|+....+ .........|+.++..+.+.++.. ...++++||..+++
T Consensus 37 D~~-------d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~ss~~v~~ 107 (281)
T d1vl0a_ 37 DIT-------NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV--GAEIVQISTDYVFD 107 (281)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH--TCEEEEEEEGGGSC
T ss_pred cCC-------CHHHHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccc--cccccccccceeee
Confidence 565 4454556665 679999999977543 345677889999999999988874 36788888888887
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
.... ...|... ..+.+.|+.+|..+|+
T Consensus 108 ~~~~~~~~e~~~----------------------------------------------------~~~~~~~~~~k~~~e~ 135 (281)
T d1vl0a_ 108 GEAKEPITEFDE----------------------------------------------------VNPQSAYGKTKLEGEN 135 (281)
T ss_dssp SCCSSCBCTTSC----------------------------------------------------CCCCSHHHHHHHHHHH
T ss_pred cccccccccccc----------------------------------------------------ccchhhhhhhhhHHHH
Confidence 6431 2222221 1567899999999999
Q ss_pred HHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 247 FIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 247 ~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
.+.+ .+.+.+|+||+.|||+... ....++.....+......+ +..+++++++|+|+++..++....
T Consensus 136 ~~~~--~~~~~~i~R~~~vyG~~~~----------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~ 201 (281)
T d1vl0a_ 136 FVKA--LNPKYYIVRTAWLYGDGNN----------FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN 201 (281)
T ss_dssp HHHH--HCSSEEEEEECSEESSSSC----------HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC
T ss_pred HHHH--hCCCccccceeEEeCCCcc----------cccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc
Confidence 9988 4679999999999998652 2334555554454444443 578899999999999999987432
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
.++||++++ +++|+.|+++.+.+.+|+..
T Consensus 202 ------~g~~~~~~~--~~~s~~e~~~~i~~~~g~~~ 230 (281)
T d1vl0a_ 202 ------YGTFHCTCK--GICSWYDFAVEIFRLTGIDV 230 (281)
T ss_dssp ------CEEEECCCB--SCEEHHHHHHHHHHHHCCCC
T ss_pred ------cCceeEeCC--CccchHHHHHHHHHHhCCCc
Confidence 468999998 89999999999999999865
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=7e-24 Score=204.27 Aligned_cols=249 Identities=14% Similarity=0.178 Sum_probs=156.1
Q ss_pred EEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE-ecC
Q 037479 15 ILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV-PGD 93 (492)
Q Consensus 15 vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v-~gD 93 (492)
|||||||||||++|+++|++.|+. .|+++.+-..+.. ..++. . ....... ..|
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~--~V~~~d~~~~~~~-~~~~~-------------~----------~~~~~~~~~~~ 55 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTK-FVNLV-------------D----------LNIADYMDKED 55 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCC--CEEEEECCSSGGG-GHHHH-------------T----------SCCSEEEEHHH
T ss_pred EEEecCccHHHHHHHHHHHhCCCC--eEEEEECCCCcch-hhccc-------------c----------cchhhhccchH
Confidence 899999999999999999999962 3456543222111 11111 0 0001111 111
Q ss_pred CCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccccc-
Q 037479 94 ITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEESG- 171 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~~- 171 (492)
+. +..........+++|+|+||..... .+.......|+.++.+++++++.. +++ +|+.||..+++....
T Consensus 56 ~~-------~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~~ 126 (307)
T d1eq2a_ 56 FL-------IQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTSD 126 (307)
T ss_dssp HH-------HHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCSC
T ss_pred HH-------HHHhhhhcccchhhhhhhcccccccccccccccccccccccccccccccc-ccc-cccccccccccccccc
Confidence 11 1111112235789999999976543 445667888999999999999986 554 777777777654332
Q ss_pred ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh
Q 037479 172 MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL 251 (492)
Q Consensus 172 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 251 (492)
..+|+. +..+.+.|+.+|..+|.++.++
T Consensus 127 ~~~~~~----------------------------------------------------~~~~~~~Y~~~K~~~e~~~~~~ 154 (307)
T d1eq2a_ 127 FIESRE----------------------------------------------------YEKPLNVYGYSKFLFDEYVRQI 154 (307)
T ss_dssp BCSSGG----------------------------------------------------GCCCSSHHHHHHHHHHHHHHHH
T ss_pred cccccc----------------------------------------------------ccccccccccccchhhhhcccc
Confidence 112111 1156789999999999999987
Q ss_pred --cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeE-EecCCCcccceeehhhhhhHHHHHHHhhhcC
Q 037479 252 --KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTC-FLGDVKGIVDVIPADMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 252 --~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~d~v~vddva~~ii~~~~~~~~~ 328 (492)
..+++++++||+.|||+...+.. +.. .....++..+..|.... ..+++...+++++++|++.++..++... .
T Consensus 155 ~~~~~~~~~~~r~~~vyGp~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~-~- 229 (307)
T d1eq2a_ 155 LPEANSQIVGFRYFNVYGPREGHKG-SMA--SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG-V- 229 (307)
T ss_dssp GGGCSSCEEEEEECEEESSSCGGGG-GGS--CHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC-C-
T ss_pred ccccccccccccceeEeeccccccc-ccc--ccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhc-c-
Confidence 56899999999999998764321 111 22334445555555433 3578888999999999999999888742 1
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHHhhc
Q 037479 329 PSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTK 361 (492)
Q Consensus 329 ~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~ 361 (492)
..+||++++ .+.|++++++.+.+..++
T Consensus 230 ----~~~~~~~~~--~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 230 ----SGIFNLGTG--RAESFQAVADATLAYHKK 256 (307)
T ss_dssp ----CEEEEESCS--CCBCHHHHHHHC------
T ss_pred ----ccccccccc--cchhHHHHHHHHHHhcCC
Confidence 578999999 899999999998776553
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=3.5e-24 Score=194.78 Aligned_cols=202 Identities=15% Similarity=0.123 Sum_probs=152.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|..|+|+|||||||+|++++++|+++|+ +|.+++|+...... ....++++
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~---~V~~~~R~~~~~~~---------------------------~~~~~~~~ 50 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDSSRLPS---------------------------EGPRPAHV 50 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCGGGSCS---------------------------SSCCCSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEEcChhhccc---------------------------cccccccc
Confidence 4578999999999999999999999996 55899996543211 11367899
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeeccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEE 169 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~ 169 (492)
+.||++ +.+.+.++++++|+|||++|....... ..++..++++++++|++. ++++||++||+.++.+.
T Consensus 51 ~~gD~~-------d~~~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~ 118 (205)
T d1hdoa_ 51 VVGDVL-------QAADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDP 118 (205)
T ss_dssp EESCTT-------SHHHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCT
T ss_pred cccccc-------chhhHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCC
Confidence 999999 666677888999999999987543322 246678999999999998 89999999998877654
Q ss_pred ccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHH
Q 037479 170 SGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIE 249 (492)
Q Consensus 170 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~ 249 (492)
.. ++ .....|...|..+|++++
T Consensus 119 ~~------~~----------------------------------------------------~~~~~~~~~~~~~e~~l~ 140 (205)
T d1hdoa_ 119 TK------VP----------------------------------------------------PRLQAVTDDHIRMHKVLR 140 (205)
T ss_dssp TC------SC----------------------------------------------------GGGHHHHHHHHHHHHHHH
T ss_pred cc------cc----------------------------------------------------ccccccchHHHHHHHHHH
Confidence 21 00 112368889999999988
Q ss_pred HhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCC
Q 037479 250 HLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQP 329 (492)
Q Consensus 250 ~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~ 329 (492)
+ .+++++|+||+.+++.... |.. .+..++.....+|+++|+|++++.++.++ ...
T Consensus 141 ~--~~~~~tiirp~~~~~~~~~---------------------~~~-~~~~~~~~~~~~i~~~DvA~~~~~~l~~~-~~~ 195 (205)
T d1hdoa_ 141 E--SGLKYVAVMPPHIGDQPLT---------------------GAY-TVTLDGRGPSRVISKHDLGHFMLRCLTTD-EYD 195 (205)
T ss_dssp H--TCSEEEEECCSEEECCCCC---------------------SCC-EEESSSCSSCSEEEHHHHHHHHHHTTSCS-TTT
T ss_pred h--cCCceEEEecceecCCCCc---------------------ccE-EEeeCCCCCCCcCCHHHHHHHHHHHhCCC-CCC
Confidence 7 7899999999998864321 111 33456667778999999999999998743 222
Q ss_pred CCCCcEEEec
Q 037479 330 SDVNNIYQVG 339 (492)
Q Consensus 330 ~~~~~iy~i~ 339 (492)
++.+.++
T Consensus 196 ---g~~~~~s 202 (205)
T d1hdoa_ 196 ---GHSTYPS 202 (205)
T ss_dssp ---TCEEEEE
T ss_pred ---CEEEecC
Confidence 5555554
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.91 E-value=5.5e-24 Score=205.47 Aligned_cols=242 Identities=14% Similarity=0.088 Sum_probs=176.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++|||||||||+|++|+++|+++|++| ++++|+.......+.-. + ......+++++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V---~~~~R~~~~~~~~~~~~-----------~--------~~~~~~~v~~v 59 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPT---YVLFRPEVVSNIDKVQM-----------L--------LYFKQLGAKLI 59 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCE---EEECCSCCSSCHHHHHH-----------H--------HHHHTTTCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEE---EEEECCCcccchhHHHH-----------H--------hhhccCCcEEE
Confidence 46789999999999999999999999755 89999876654322111 0 01123678999
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.+|+. +.+....+++++++++|+++.... ..|..++.+++++|++. +..++++.||..++....
T Consensus 60 ~~d~~-------d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~~~ 123 (312)
T d1qyda_ 60 EASLD-------DHQRLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPDIM 123 (312)
T ss_dssp CCCSS-------CHHHHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTTSC
T ss_pred Eeecc-------cchhhhhhccCcchhhhhhhhccc--------ccchhhhhHHHHHHHHh-cCCcEEEEeeccccCCCc
Confidence 99999 566666888999999999986432 34667788899999987 556778888765554321
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
. . ...+...|..+|..+|+....
T Consensus 124 ~------~---------------------------------------------------~~~~~~~~~~~~~~~~~~~~~ 146 (312)
T d1qyda_ 124 E------H---------------------------------------------------ALQPGSITFIDKRKVRRAIEA 146 (312)
T ss_dssp C------C---------------------------------------------------CCSSTTHHHHHHHHHHHHHHH
T ss_pred c------c---------------------------------------------------ccchhhhhhHHHHHHHHhhcc
Confidence 0 0 013456788888888887665
Q ss_pred hcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCC
Q 037479 251 LKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPS 330 (492)
Q Consensus 251 ~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~ 330 (492)
.+++++++||+.++|+.......+.... ...+....++++++..+++|+++|+|++++.++.+.. ..+
T Consensus 147 --~~~~~~i~r~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~-~~~ 214 (312)
T d1qyda_ 147 --ASIPYTYVSSNMFAGYFAGSLAQLDGHM---------MPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-TLN 214 (312)
T ss_dssp --TTCCBCEEECCEEHHHHTTTSSCTTCCS---------SCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-GSS
T ss_pred --cccceEEeccceeecCCccchhhHHHHh---------hhcccccccccccccccceeeHHHHHHHHHHHhcCcc-ccC
Confidence 6899999999999998765444332221 1122344567889999999999999999999987533 221
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 331 DVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 331 ~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+.+|+++++ +++|++|+++.+.+.+|+..
T Consensus 215 --~~~~~~~~~--~~~s~~e~~~~~~~~~g~~~ 243 (312)
T d1qyda_ 215 --KTMYIRPPM--NILSQKEVIQIWERLSEQNL 243 (312)
T ss_dssp --SEEECCCGG--GEEEHHHHHHHHHHHHTCCC
T ss_pred --ceEEEeCCC--cCCCHHHHHHHHHHHHCCCC
Confidence 345777776 78999999999999998764
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.90 E-value=4.2e-24 Score=205.28 Aligned_cols=237 Identities=17% Similarity=0.162 Sum_probs=170.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|||||||||+|++++++|+++|++| ++++|+.......++.. .+. .....++.++
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V---~~l~R~~~~~~~~~~~~----------~~~--------~~~~~~~~~~ 60 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPT---FLLVRESTASSNSEKAQ----------LLE--------SFKASGANIV 60 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCE---EEECCCCCTTTTHHHHH----------HHH--------HHHTTTCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeE---EEEECCCccccchhHHH----------HHH--------hhccCCcEEE
Confidence 46899999999999999999999999754 89999876544333221 000 1123678999
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.+|+. +.......+++++.|+|+++... +.++.+++++++.. +.+++++.||........
T Consensus 61 ~~d~~-------~~~~~~~~~~~~~~vi~~~~~~~------------~~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~ 120 (307)
T d1qyca_ 61 HGSID-------DHASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNV 120 (307)
T ss_dssp CCCTT-------CHHHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCSEEECSCCSSCTTSC
T ss_pred Eeecc-------cchhhhhhhhhceeeeecccccc------------cchhhHHHHHHHHh-ccccceeeeccccccccc
Confidence 99999 55555577789999999997543 34556677888887 677888888754443221
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
. . ......|...+..+|..+.+
T Consensus 121 ~------~----------------------------------------------------~~~~~~~~~~~~~~~~~~~~ 142 (307)
T d1qyca_ 121 H------A----------------------------------------------------VEPAKSVFEVKAKVRRAIEA 142 (307)
T ss_dssp C------C----------------------------------------------------CTTHHHHHHHHHHHHHHHHH
T ss_pred c------c----------------------------------------------------cccccccccccccccchhhc
Confidence 0 0 01223566667777777766
Q ss_pred hcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCC
Q 037479 251 LKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPS 330 (492)
Q Consensus 251 ~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~ 330 (492)
.+++++++||+.++|+...++..+ +....++.....+++++..+++|+++|+|++++.++..... .+
T Consensus 143 --~~~~~~i~r~~~v~g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~ 209 (307)
T d1qyca_ 143 --EGIPYTYVSSNCFAGYFLRSLAQA----------GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT-LN 209 (307)
T ss_dssp --HTCCBEEEECCEEHHHHTTTTTCT----------TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG-TT
T ss_pred --cCCCceecccceecCCCccchhhh----------hhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhh-cC
Confidence 578999999999999876443322 22233445556788999999999999999999998874332 21
Q ss_pred CCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 331 DVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 331 ~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
+.+|+++++ +++|+.|+++.+.+.+|+++
T Consensus 210 --~~~~~~~~~--~~~s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 210 --KTLYLRLPA--NTLSLNELVALWEKKIDKTL 238 (307)
T ss_dssp --EEEECCCGG--GEEEHHHHHHHHHHHTTSCC
T ss_pred --ceeEEeCCC--CccCHHHHHHHHHHHHCCCC
Confidence 346777777 88999999999999999764
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.90 E-value=3.2e-24 Score=196.10 Aligned_cols=189 Identities=17% Similarity=0.079 Sum_probs=135.1
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|||||||||||++|+++|+++|+.+ +|++++|++.... +++....
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~-~v~~~~r~~~~~~-------------------------------~~~~~~~ 49 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLA-KVIAPARKALAEH-------------------------------PRLDNPV 49 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCC-EEECCBSSCCCCC-------------------------------TTEECCB
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeE-EEEEEeCCchhhc-------------------------------ccccccc
Confidence 4899999999999999999999998643 6778777654321 3444444
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
+|+. +....+...+|+||||+|..... .....+.+.|+.++.+++++|++. ++++|+|+||+.+++.
T Consensus 50 ~d~~---------~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~-- 117 (212)
T d2a35a1 50 GPLA---------ELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK-- 117 (212)
T ss_dssp SCHH---------HHGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT--
T ss_pred cchh---------hhhhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-cccccccccccccccc--
Confidence 4433 22334445799999999876432 334678899999999999999997 8999999999876643
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
..+.|..+|..+|+.+.+
T Consensus 118 --------------------------------------------------------------~~~~y~~~K~~~E~~l~~ 135 (212)
T d2a35a1 118 --------------------------------------------------------------SSIFYNRVKGELEQALQE 135 (212)
T ss_dssp --------------------------------------------------------------CSSHHHHHHHHHHHHHTT
T ss_pred --------------------------------------------------------------cccchhHHHHHHhhhccc
Confidence 346899999999999876
Q ss_pred hcCCC-cEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHh
Q 037479 251 LKENM-SVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 251 ~~~~~-~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~ 324 (492)
.++ +++|+||++|||+...+...+. + .......++ .....|+++|+|++++.++.+
T Consensus 136 --~~~~~~~I~Rp~~v~G~~~~~~~~~~---------~---~~~~~~~~~----~~~~~i~v~DvA~ai~~~~~~ 192 (212)
T d2a35a1 136 --QGWPQLTIARPSLLFGPREEFRLAEI---------L---AAPIARILP----GKYHGIEACDLARALWRLALE 192 (212)
T ss_dssp --SCCSEEEEEECCSEESTTSCEEGGGG---------T---TCCCC--------CHHHHHHHHHHHHHHHHHHTC
T ss_pred --cccccceeeCCcceeCCcccccHHHH---------H---HHHHhhccC----CCCcEEEHHHHHHHHHHHHcC
Confidence 455 4999999999998764311100 0 000011111 223569999999999998863
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.90 E-value=6e-23 Score=196.88 Aligned_cols=232 Identities=17% Similarity=0.152 Sum_probs=160.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|||||||||||++|++.|++.|+ ++.+.+.... +.+
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~----~v~~~~~~~~--------------------------------------~~~ 38 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGN----LIALDVHSKE--------------------------------------FCG 38 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSE----EEEECTTCSS--------------------------------------SCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC----EEEEECCCcc--------------------------------------ccC
Confidence 6899999999999999999998874 2344433211 347
Q ss_pred CCCCCCCCCCchhhHHHhcc--CccEEEEcccccCcc---hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeec
Q 037479 93 DITREDLGVKDSNLREEMWN--KLDVVINLAATTNFD---ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWG 167 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~--~vd~Vih~Aa~~~~~---~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~ 167 (492)
|++ +.+.++.+++ ++|+||||||....+ .......++|+.++.+++++|++. + .+++++||+.+++
T Consensus 39 Dl~-------~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~ 109 (298)
T d1n2sa_ 39 DFS-------NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFP 109 (298)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSC
T ss_pred cCC-------CHHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-c-ccccccccccccc
Confidence 887 5555556666 569999999976542 456778899999999999999986 4 4688999988886
Q ss_pred cccc-ceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHH
Q 037479 168 EESG-MLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEM 246 (492)
Q Consensus 168 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~ 246 (492)
.... ..+|... ..+.+.|+.+|..+|.
T Consensus 110 ~~~~~~~~E~~~----------------------------------------------------~~p~~~y~~~k~~~e~ 137 (298)
T d1n2sa_ 110 GTGDIPWQETDA----------------------------------------------------TSPLNVYGKTKLAGEK 137 (298)
T ss_dssp CCTTCCBCTTSC----------------------------------------------------CCCSSHHHHHHHHHHH
T ss_pred CCCCCCCccccc----------------------------------------------------cCCCchHhhhhhhhhh
Confidence 5432 2233221 1467899999999999
Q ss_pred HHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhh
Q 037479 247 FIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHA 326 (492)
Q Consensus 247 ~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~ 326 (492)
.+.++.. ...++|++..++..... ....+...+..+.. +...+....++++++|+++++..++....
T Consensus 138 ~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~i~~~~ 204 (298)
T d1n2sa_ 138 ALQDNCP--KHLIFRTSWVYAGKGNN---------FAKTMLRLAKERQT--LSVINDQYGAPTGAELLADCTAHAIRVAL 204 (298)
T ss_dssp HHHHHCS--SEEEEEECSEECSSSCC---------HHHHHHHHHHHCSE--EEEECSCEECCEEHHHHHHHHHHHHHHHH
T ss_pred hHHhhhc--ccccccccceeeccCCc---------cchhhhhhhcccce--eecccceeecccccchHHHHHHHHHhhhh
Confidence 9987633 34566666555443321 11122222222222 22334567799999999999988776432
Q ss_pred cCCCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCC
Q 037479 327 KQPSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKP 363 (492)
Q Consensus 327 ~~~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p 363 (492)
..... .++||++++ ..+++.++++.+.+..++..
T Consensus 205 ~~~~~-~~~~n~~~~--~~~~~~~~~~~i~~~~~~~~ 238 (298)
T d1n2sa_ 205 NKPEV-AGLYHLVAG--GTTTWHDYAALVFDEARKAG 238 (298)
T ss_dssp HCGGG-CEEEECCCB--SCEEHHHHHHHHHHHHHHHT
T ss_pred ccccc-cccccccCC--CceecHHHHHHHHhhhhccC
Confidence 22212 789999998 88999999999988777644
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.89 E-value=2.4e-23 Score=193.52 Aligned_cols=229 Identities=16% Similarity=0.133 Sum_probs=159.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.++|||||||||||++++++|++.|++| .|++++|+++.. + ....+++++.
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v-~v~~~~R~~~~~---~-------------------------~~~~~~~~~~ 53 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGK---E-------------------------KIGGEADVFI 53 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTC-EEEEEESCHHHH---H-------------------------HTTCCTTEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcE-EEEEEcCCHHHH---H-------------------------hccCCcEEEE
Confidence 3799999999999999999999999887 678888864311 0 0136788999
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc----------------hhHHHHHHHhHHHHHHHHHHHHhcccce
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD----------------ERYDVALDLNTFGAKHVLNFSKKCAKLI 155 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~----------------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~ 155 (492)
+|++ +.+...++++++|+|||+|+..... .......++|+.|+.+++..+... ..+
T Consensus 54 ~d~~-------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 125 (252)
T d2q46a1 54 GDIT-------DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVK 125 (252)
T ss_dssp CCTT-------SHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCS
T ss_pred eeec-------cccccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-ccc
Confidence 9999 5556668889999999999865321 123455788999999999999887 677
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
.+.+.|+......... .. .....
T Consensus 126 ~~~~~s~~~~~~~~~~------~~---------------------------------------------------~~~~~ 148 (252)
T d2q46a1 126 HIVVVGSMGGTNPDHP------LN---------------------------------------------------KLGNG 148 (252)
T ss_dssp EEEEEEETTTTCTTCG------GG---------------------------------------------------GGGGC
T ss_pred ccccccccccCCCCcc------cc---------------------------------------------------ccccc
Confidence 8888887554432210 00 01234
Q ss_pred hHHHHHHHHHHHHHHhcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhh
Q 037479 236 TYVFTKVMGEMFIEHLKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVV 315 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva 315 (492)
.|...+.+.+....+ .+++++++||+.|+|+.......+.... ........++||++|||
T Consensus 149 ~~~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~------------------~~~~~~~~~~i~~~Dva 208 (252)
T d2q46a1 149 NILVWKRKAEQYLAD--SGTPYTIIRAGGLLDKEGGVRELLVGKD------------------DELLQTDTKTVPRADVA 208 (252)
T ss_dssp CHHHHHHHHHHHHHH--SSSCEEEEEECEEECSCTTSSCEEEEST------------------TGGGGSSCCEEEHHHHH
T ss_pred chhhhhhhhhhhhhc--ccccceeecceEEECCCcchhhhhhccC------------------cccccCCCCeEEHHHHH
Confidence 566677776666655 7899999999999998764332211110 00112334799999999
Q ss_pred hHHHHHHHhhhcCCCCCCcEEEecCCC-CCcccHHHHHHHHHHH
Q 037479 316 NAIVVAVVAHAKQPSDVNNIYQVGSSL-RNPLIYTNLQDYAYRY 358 (492)
Q Consensus 316 ~~ii~~~~~~~~~~~~~~~iy~i~~~~-~~~~t~~e~~~~~~~~ 358 (492)
++++.++.++. .. +++||++++. ....++.++.+.+.+.
T Consensus 209 ~a~~~~l~~~~-~~---g~~~~i~~~~~~~~~~~~~~~~lf~~i 248 (252)
T d2q46a1 209 EVCIQALLFEE-AK---NKAFDLGSKPEGTSTPTKDFKALFSQV 248 (252)
T ss_dssp HHHHHHTTCGG-GT---TEEEEEEECCTTTSCCCCCHHHHHTTC
T ss_pred HHHHHHhCCcc-cc---CcEEEEeeCCCCCChhHHHHHHHHHHH
Confidence 99999987433 22 7899998752 2345677776665544
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.86 E-value=9e-21 Score=186.43 Aligned_cols=244 Identities=14% Similarity=0.035 Sum_probs=170.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++|+|+|||||||+|++|+++|+++|++| ++++|+.++.... .+. ...+++.+
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V---~~l~R~~~~~~~~-~~~-----------------------~~~~v~~~ 54 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHV---RAQVHSLKGLIAE-ELQ-----------------------AIPNVTLF 54 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCE---EEEESCSCSHHHH-HHH-----------------------TSTTEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeE---EEEECCcchhhhh-hhc-----------------------ccCCCEEE
Confidence 47899999999999999999999999755 8999976653221 111 12679999
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeeeceeecccc
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVSTAFVWGEES 170 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST~~v~~~~~ 170 (492)
.||+.+ +.+.+..++.++|++++...... ..|+..+.+++++|++. +++++|+.||........
T Consensus 55 ~gD~~d------~~~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~ 118 (350)
T d1xgka_ 55 QGPLLN------NVPLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYG 118 (350)
T ss_dssp ESCCTT------CHHHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTS
T ss_pred EeeCCC------cHHHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEEeeccccccCC
Confidence 999985 34556678889999988764321 23567788999999998 778888888864333211
Q ss_pred cceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHH
Q 037479 171 GMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEH 250 (492)
Q Consensus 171 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~ 250 (492)
......|..+|...|..+.+
T Consensus 119 ------------------------------------------------------------~~~~~~~~~~k~~~~~~~~~ 138 (350)
T d1xgka_ 119 ------------------------------------------------------------PWPAVPMWAPKFTVENYVRQ 138 (350)
T ss_dssp ------------------------------------------------------------SCCCCTTTHHHHHHHHHHHT
T ss_pred ------------------------------------------------------------cccchhhhhhHHHHHHHHHh
Confidence 02345677889988888776
Q ss_pred hcCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee-eEEecCCCcccceeeh-hhhhhHHHHHHHhhhcC
Q 037479 251 LKENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL-TCFLGDVKGIVDVIPA-DMVVNAIVVAVVAHAKQ 328 (492)
Q Consensus 251 ~~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~d~v~v-ddva~~ii~~~~~~~~~ 328 (492)
.+++++++||+..++....+....... .....|.. ...+.+++....++++ +|+++++..++...+..
T Consensus 139 --~~~~~~~vr~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~ 208 (350)
T d1xgka_ 139 --LGLPSTFVYAGIYNNNFTSLPYPLFQM--------ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK 208 (350)
T ss_dssp --SSSCEEEEEECEEGGGCBSSSCSSCBE--------EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH
T ss_pred --hccCceeeeeceeeccccccccccccc--------cccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhh
Confidence 678999999999887654322211110 00112221 2345667777888876 89999999888753322
Q ss_pred CCCCCcEEEecCCCCCcccHHHHHHHHHHHhhcCCCCCCCCCcEEeccee
Q 037479 329 PSDVNNIYQVGSSLRNPLIYTNLQDYAYRYFTKKPWINKDGKPVKVGKIT 378 (492)
Q Consensus 329 ~~~~~~iy~i~~~~~~~~t~~e~~~~~~~~~~~~p~~~~~~~~~~~p~~~ 378 (492)
.. +++|++++. .+|+.|+++.+.+.+|++. +...+|...
T Consensus 209 ~~--G~~~~~~g~---~~T~~eia~~l~~~~G~~v------~~~~vp~~~ 247 (350)
T d1xgka_ 209 WN--GHRIALTFE---TLSPVQVCAAFSRALNRRV------TYVQVPKVE 247 (350)
T ss_dssp HT--TCEEEECSE---EECHHHHHHHHHHHHTSCE------EEEECSSCC
T ss_pred cC--CeEEEEeCC---cCCHHHHHHHHHHHHCCcc------eEEECCHHH
Confidence 11 789999874 6999999999999999865 235556544
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=5e-16 Score=143.78 Aligned_cols=218 Identities=19% Similarity=0.201 Sum_probs=148.6
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+++||++|||||++.||+.++++|++.|. +|++..|++. ++. .+.++ ..++.
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~---~V~~~~r~~~------~l~----------~~~~~---------~~~~~ 55 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGA---RVVAVSRTQA------DLD----------SLVRE---------CPGIE 55 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH----------HHHHH---------STTCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHH------HHH----------HHHHh---------cCCCe
Confidence 37899999999999999999999999996 5588887632 222 11122 14578
Q ss_pred EEecCCCCCCCCCCchhhHHHhcc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-c---ccc
Q 037479 89 LVPGDITREDLGVKDSNLREEMWN---KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK-C---AKL 154 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~~ 154 (492)
.+.+|++ +++..+++++ ++|++||+|+.... .+.++..+++|+.|+..+.+.+.+ + .+-
T Consensus 56 ~~~~Dv~-------d~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~ 128 (244)
T d1pr9a_ 56 PVCVDLG-------DWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP 128 (244)
T ss_dssp EEECCTT-------CHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCC-------CHHHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCc
Confidence 8999999 4444555554 79999999997643 256889999999999998887654 2 133
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|.+||....... ...
T Consensus 129 g~Ii~isS~~~~~~~--------------------------------------------------------------~~~ 146 (244)
T d1pr9a_ 129 GAIVNVSSQCSQRAV--------------------------------------------------------------TNH 146 (244)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------------TTB
T ss_pred ceEeecccccccccc--------------------------------------------------------------cch
Confidence 589999986543221 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.||+..+.+.+.. ..++++..|.|+.|-.+..+... .. ......+... . ..--+.
T Consensus 147 ~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~---~~----~~~~~~~~~~----~-----pl~R~~ 210 (244)
T d1pr9a_ 147 SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW---SD----PHKAKTMLNR----I-----PLGKFA 210 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTS---CS----HHHHHHHHTT----C-----TTCSCB
T ss_pred hhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhc---cC----hHHHHHHHhc----C-----CCCCCc
Confidence 57999999998887755 45899999999988765432110 00 1111111110 0 111356
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+|+|++++.++.+...--. |+++.+.+|
T Consensus 211 ~peevA~~v~fL~S~~a~~it--G~~i~vDGG 240 (244)
T d1pr9a_ 211 EVEHVVNAILFLLSDRSGMTT--GSTLPVEGG 240 (244)
T ss_dssp CHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhCCcC--CcEEEECcc
Confidence 789999999988864433222 888988876
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.67 E-value=1.2e-15 Score=140.84 Aligned_cols=211 Identities=15% Similarity=0.100 Sum_probs=147.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++.||+.++++|++.|. +|++..|++. +++ .+.++ +..++.+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~---~V~~~~r~~~------~~~----------~~~~~--------~~~~~~~ 56 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGA---KVVFGDILDE------EGK----------AMAAE--------LADAARY 56 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH----------HHHHH--------TGGGEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHH----------HHHHH--------hhCcceE
Confidence 6899999999999999999999999996 5588888642 222 11111 1357888
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-cc--
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK-CA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~-- 152 (492)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. +.
T Consensus 57 ~~~Dv~~-------~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 129 (244)
T d1nffa_ 57 VHLDVTQ-------PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA 129 (244)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc
Confidence 9999994 44333333 369999999997643 256889999999999999886643 21
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||....... .
T Consensus 130 ~~G~Ii~isS~~~~~~~--------------------------------------------------------------~ 147 (244)
T d1nffa_ 130 GRGSIINISSIEGLAGT--------------------------------------------------------------V 147 (244)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CcceEEecccccccccc--------------------------------------------------------------c
Confidence 23579999996543221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..|+++..|-|+.|-.+..+..+.... .. ...-
T Consensus 148 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~------------------~~-----pl~R 204 (244)
T d1nffa_ 148 ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIF------------------QT-----ALGR 204 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCS------------------CC-----SSSS
T ss_pred cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHH------------------hc-----cccC
Confidence 2357999999999888755 468999999999887654432221110 00 1113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++......- + |+++.+.+|
T Consensus 205 ~~~p~diA~~v~fL~s~~s~~i-t-G~~i~vDGG 236 (244)
T d1nffa_ 205 AAEPVEVSNLVVYLASDESSYS-T-GAEFVVDGG 236 (244)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCHHHHHHHHHHHhChhhCCC-c-CCEEEECCC
Confidence 5678999999998886433322 2 889999877
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.67 E-value=9.1e-16 Score=141.24 Aligned_cols=208 Identities=16% Similarity=0.189 Sum_probs=143.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++.||+.++++|++.|. +|++..|+.... +++..
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga---~V~~~~r~~~~~--------------------------------~~~~~ 49 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGH---KVAVTHRGSGAP--------------------------------KGLFG 49 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSSCCC--------------------------------TTSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCcchh--------------------------------cCceE
Confidence 6899999999999999999999999996 568888875432 55678
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ ++..++++ .++|++||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 50 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 122 (237)
T d1uzma1 50 VEVDVTD-------SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN 122 (237)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEEecCC-------HHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc
Confidence 9999995 44333333 369999999997532 2568899999999998887765432 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||....... .
T Consensus 123 ~~g~Iv~isS~~~~~~~--------------------------------------------------------------~ 140 (237)
T d1uzma1 123 KFGRMIFIGSVSGLWGI--------------------------------------------------------------G 140 (237)
T ss_dssp TCEEEEEECCCCC-------------------------------------------------------------------
T ss_pred CCCceEEEcchhhccCC--------------------------------------------------------------c
Confidence 34589999996544221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+..+ ......... ..| ..-
T Consensus 141 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~---------~~~~~~~~~----~~p-----l~R 202 (237)
T d1uzma1 141 NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD---------ERIQQGALQ----FIP-----AKR 202 (237)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC---------HHHHHHHGG----GCT-----TCS
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC---------HHHHHHHHh----cCC-----CCC
Confidence 3458999999888887654 46899999999988654322111 011111111 011 112
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++.+...--. |+++.+.+|
T Consensus 203 ~~~pedvA~~v~fL~S~~s~~it--G~~i~vdGG 234 (237)
T d1uzma1 203 VGTPAEVAGVVSFLASEDASYIS--GAVIPVDGG 234 (237)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCCc--CCeEEECCC
Confidence 45679999999988864433222 888988876
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.67 E-value=1.6e-15 Score=141.13 Aligned_cols=223 Identities=15% Similarity=0.164 Sum_probs=147.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+||||||++-||+.++++|++.|.+ |+++.|........+.+ ....+ ..++.+
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~---vii~~r~~~~~~~~~~~-------------~~~~~-------~~~~~~ 59 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK---NFVILDRVENPTALAEL-------------KAINP-------KVNITF 59 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS---EEEEEESSCCHHHHHHH-------------HHHCT-------TSEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEECCcccHHHHHHH-------------HhhCC-------CCCEEE
Confidence 57999999999999999999999999964 48888877654322222 12211 367899
Q ss_pred EecCCCCCCCCCCchhhHHHh---ccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcc------cceeEEEe
Q 037479 90 VPGDITREDLGVKDSNLREEM---WNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCA------KLIVLVHV 160 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~---~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~------~~~~~V~v 160 (492)
+.+|++.+.-. -.+..+.+ ..++|++||+||... ++.++..+++|+.|+.++.+++.... ...++|++
T Consensus 60 ~~~d~~~~~~~--~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~i 136 (254)
T d1sbya1 60 HTYDVTVPVAE--SKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANI 136 (254)
T ss_dssp EECCTTSCHHH--HHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEE
T ss_pred EEeecCCCHHH--HHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEE
Confidence 99999853100 01111122 247999999999764 46789999999999999988775421 13469999
Q ss_pred eeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 161 STAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 161 ST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
||....... .....|+.|
T Consensus 137 sS~~~~~~~--------------------------------------------------------------~~~~~Y~as 154 (254)
T d1sbya1 137 CSVTGFNAI--------------------------------------------------------------HQVPVYSAS 154 (254)
T ss_dssp CCGGGTSCC--------------------------------------------------------------TTSHHHHHH
T ss_pred echhhccCC--------------------------------------------------------------CCCHHHHHH
Confidence 885543211 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhh
Q 037479 241 KVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVV 315 (492)
Q Consensus 241 K~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva 315 (492)
|+....+.+.. ..++++..|.|+.|..+..+....|.+.... +.... ......+.+++|
T Consensus 155 Kaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~----~~~~~------------~~~~~~~~e~va 218 (254)
T d1sbya1 155 KAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPR----VAELL------------LSHPTQTSEQCG 218 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTT----HHHHH------------TTSCCEEHHHHH
T ss_pred HHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHH----HHhcc------------ccCCCCCHHHHH
Confidence 99888877654 4589999999999986532211111111111 11100 011345899999
Q ss_pred hHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 316 NAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 316 ~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
++++.++.... . |.++.+.+|
T Consensus 219 ~~~~~~~~~~~--t---G~vi~vdgG 239 (254)
T d1sbya1 219 QNFVKAIEANK--N---GAIWKLDLG 239 (254)
T ss_dssp HHHHHHHHHCC--T---TCEEEEETT
T ss_pred HHHHHhhhCCC--C---CCEEEECCC
Confidence 99988876432 2 889998887
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=6.9e-16 Score=142.69 Aligned_cols=216 Identities=16% Similarity=0.149 Sum_probs=146.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++.||+.++++|++.|. +|++..|+++. .+.+. ++ +..+...
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~---~Vv~~~r~~~~---l~~~~-------------~~--------~~~~~~~ 54 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGA---KVIGTATSENG---AQAIS-------------DY--------LGANGKG 54 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHH-------------HH--------HGGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHH-------------HH--------hCCCCcE
Confidence 5899999999999999999999999996 45777876321 22221 11 1356788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.+..
T Consensus 55 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 127 (243)
T d1q7ba_ 55 LMLNVTD-------PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK 127 (243)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecC-------HHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc
Confidence 9999994 33333333 369999999987643 25688999999999999988875431
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||....... .
T Consensus 128 ~~G~II~isS~~~~~~~--------------------------------------------------------------~ 145 (243)
T d1q7ba_ 128 RHGRIITIGSVVGTMGN--------------------------------------------------------------G 145 (243)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------------T
T ss_pred CCCEeeeecchhhcCCC--------------------------------------------------------------C
Confidence 33589999986543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+... ......+.. .....-
T Consensus 146 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~---------~~~~~~~~~---------~~pl~R 207 (243)
T d1q7ba_ 146 GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS---------DDQRAGILA---------QVPAGR 207 (243)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---------HHHHHHHHT---------TCTTSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh---------hhHHHHHHh---------cCCCCC
Confidence 2358999999998888754 56899999999988654321110 011111111 011113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|+++..++.....-- + |+++++.+|
T Consensus 208 ~~~pedvA~~v~fL~S~~s~~i-t-Gq~i~vdGG 239 (243)
T d1q7ba_ 208 LGGAQEIANAVAFLASDEAAYI-T-GETLHVNGG 239 (243)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCchhcCC-c-CCeEEECCC
Confidence 5678999999998886433322 2 889998877
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.65 E-value=7e-15 Score=136.47 Aligned_cols=222 Identities=15% Similarity=0.099 Sum_probs=146.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++.||+.++++|++.|. +|.+..|+.+.. +... ..+.++. ..++..
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~~---~~~~---------~~l~~~~--------g~~~~~ 59 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGC---SVVVASRNLEEA---SEAA---------QKLTEKY--------GVETMA 59 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHH---HHHH---------HHHHHHH--------CCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHH---------HHHHHHh--------CCcEEE
Confidence 5799999999999999999999999996 558888864321 1111 1122221 257889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+....
T Consensus 60 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 132 (251)
T d1vl8a_ 60 FRCDVSN-------YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES 132 (251)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc
Confidence 9999994 44443433 369999999997532 25688999999999999998865532
Q ss_pred cceeEEEeeeceee-cccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 KLIVLVHVSTAFVW-GEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~~~~~V~vST~~v~-~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|.+||.... +..
T Consensus 133 ~~G~Ii~i~S~~~~~~~~-------------------------------------------------------------- 150 (251)
T d1vl8a_ 133 DNPSIINIGSLTVEEVTM-------------------------------------------------------------- 150 (251)
T ss_dssp SSCEEEEECCGGGTCCCS--------------------------------------------------------------
T ss_pred ccccccccccchhccccC--------------------------------------------------------------
Confidence 23489999874321 110
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+.. ... ......+... .| ..
T Consensus 151 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~---~~~----~~~~~~~~~~----~p-----l~ 214 (251)
T d1vl8a_ 151 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV---FSD----PEKLDYMLKR----IP-----LG 214 (251)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHH---HTC----HHHHHHHHHT----CT-----TS
T ss_pred ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhc---cCC----HHHHHHHHhc----CC-----CC
Confidence 12357999999999888755 4689999999998866543210 000 1111111110 00 11
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++.....-- + |+++.+.+|
T Consensus 215 R~~~pedvA~~v~fL~S~~a~~i-t-G~~i~vDGG 247 (251)
T d1vl8a_ 215 RTGVPEDLKGVAVFLASEEAKYV-T-GQIIFVDGG 247 (251)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCchhCCC-c-CcEEEeCcC
Confidence 24567999999998886443322 2 889998876
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.65 E-value=4e-15 Score=138.19 Aligned_cols=217 Identities=14% Similarity=0.059 Sum_probs=145.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++-||+.++++|++.|. +|++..|+.. ++.+ +.++ +..++.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~------~~~~----------~~~~--------~~~~~~~ 55 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGA---RVVLADVLDE------EGAA----------TARE--------LGDAARY 55 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHH----------HHHT--------TGGGEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHHH----------HHHH--------hCCceEE
Confidence 5899999999999999999999999996 5688888642 2221 1111 1367889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc---c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---A 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (492)
+.+|+++ ++..++++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 56 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~ 128 (254)
T d1hdca_ 56 QHLDVTI-------EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA 128 (254)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcccCC-------HHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc
Confidence 9999994 44444443 369999999997643 2567889999999999998877542 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||....... .
T Consensus 129 ~~G~II~isS~~~~~~~--------------------------------------------------------------~ 146 (254)
T d1hdca_ 129 GGGSIVNISSAAGLMGL--------------------------------------------------------------A 146 (254)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCCeecccccchhcccc--------------------------------------------------------------c
Confidence 34589999996543221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..++++..|.|+.|-.+...... . ..........| - .+-
T Consensus 147 ~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~---~----------~~~~~~~~~~p---l-~R~ 209 (254)
T d1hdca_ 147 LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG---I----------RQGEGNYPNTP---M-GRV 209 (254)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT---C----------CCSTTSCTTST---T-SSC
T ss_pred chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcC---H----------HHHHHHHhCCC---C-CCC
Confidence 3458999999998887755 46899999999988643210000 0 00000000000 0 000
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....+|||++++.++......- + |+++.+.+|
T Consensus 210 g~~PedvA~~v~fL~S~~a~~i-t-G~~i~vDGG 241 (254)
T d1hdca_ 210 GNEPGEIAGAVVKLLSDTSSYV-T-GAELAVDGG 241 (254)
T ss_dssp B-CHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCHHHHHHHHHHHhchhhCCC-C-CceEEeCCC
Confidence 1246899999999886443322 2 889999887
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.64 E-value=5.8e-15 Score=136.75 Aligned_cols=219 Identities=13% Similarity=0.156 Sum_probs=143.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.+++.|++.|. +|++..|++... ..+.+ ++ ...++..
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga---~V~~~~~~~~~~-~~~~~--------------~~--------~g~~~~~ 56 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGA---DIAIADLVPAPE-AEAAI--------------RN--------LGRRVLT 56 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCHH-HHHHH--------------HH--------TTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCchHH-HHHHH--------------HH--------cCCcEEE
Confidence 6899999999999999999999999996 557777765321 11111 11 1367899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.+..
T Consensus 57 ~~~Dvs~-------~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 129 (247)
T d2ew8a1 57 VKCDVSQ-------PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN 129 (247)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc
Confidence 9999994 44444443 479999999997643 25688999999999999988775431
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||....... .
T Consensus 130 ~~G~Iv~isS~~~~~~~--------------------------------------------------------------~ 147 (247)
T d2ew8a1 130 GWGRIINLTSTTYWLKI--------------------------------------------------------------E 147 (247)
T ss_dssp TCEEEEEECCGGGGSCC--------------------------------------------------------------S
T ss_pred CCCCccccccchhcccC--------------------------------------------------------------c
Confidence 33589999986543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+.... + ... ..........--
T Consensus 148 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~--~------~~~--------~~~~~~~~~l~r 211 (247)
T d2ew8a1 148 AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL--S------AMF--------DVLPNMLQAIPR 211 (247)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------------CTTSSSCS
T ss_pred ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc--c------hhH--------HHHHHHhccCCC
Confidence 2457999999888887654 468999999999987654322100 0 000 000000011112
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++.....-- + |++..+.+|
T Consensus 212 ~~~pedvA~~v~fL~S~~s~~i-t-G~~i~vDGG 243 (247)
T d2ew8a1 212 LQVPLDLTGAAAFLASDDASFI-T-GQTLAVDGG 243 (247)
T ss_dssp CCCTHHHHHHHHHHTSGGGTTC-C-SCEEEESSS
T ss_pred CCCHHHHHHHHHHHhCchhcCC-c-CCeEEECCC
Confidence 4567999999998886433222 2 888988877
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.64 E-value=1.7e-15 Score=139.96 Aligned_cols=217 Identities=18% Similarity=0.153 Sum_probs=146.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++.||+.++++|++.|. +|++..|++.. .+.+ .++ ..++..
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~~~---l~~~-------------~~~---------~~~~~~ 54 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGA---KVVAVTRTNSD---LVSL-------------AKE---------CPGIEP 54 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHH-------------HHH---------STTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHH-------------HHh---------cCCCeE
Confidence 5799999999999999999999999996 55888876421 1111 112 146788
Q ss_pred EecCCCCCCCCCCchhhHHHhcc---CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----ccce
Q 037479 90 VPGDITREDLGVKDSNLREEMWN---KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC----AKLI 155 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~---~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~~ 155 (492)
+.+|+++ ++..+++++ ++|++||+||.... .+.++..+++|+.|+..+.+.+... +.-.
T Consensus 55 ~~~Dv~~-------~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g 127 (242)
T d1cyda_ 55 VCVDLGD-------WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG 127 (242)
T ss_dssp EECCTTC-------HHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEeCCC-------HHHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccC
Confidence 9999994 444555554 79999999997643 2568899999999999998876431 1234
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
++|.+||....... ....
T Consensus 128 ~ii~isS~~~~~~~--------------------------------------------------------------~~~~ 145 (242)
T d1cyda_ 128 SIVNVSSMVAHVTF--------------------------------------------------------------PNLI 145 (242)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------------TTBH
T ss_pred cccccchhhccccC--------------------------------------------------------------Cccc
Confidence 78999986433221 1235
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
.|+.||+..+.+.+.. ..|+++..|-|+.|-.+..+.. .........+... . ...-+..
T Consensus 146 ~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~~----~-----pl~R~~~ 209 (242)
T d1cyda_ 146 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV-------SADPEFARKLKER----H-----PLRKFAE 209 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH-------TCCHHHHHHHHHH----S-----TTSSCBC
T ss_pred cccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhh-------cCCHHHHHHHHhc----C-----CCCCCcC
Confidence 7999999999888755 4689999999998865432111 0111111111110 0 1113566
Q ss_pred hhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.+|+|++++.++......- + |+++.+.+|
T Consensus 210 peeva~~v~fL~S~~s~~i-t-G~~i~vDGG 238 (242)
T d1cyda_ 210 VEDVVNSILFLLSDRSAST-S-GGGILVDAG 238 (242)
T ss_dssp HHHHHHHHHHHHSGGGTTC-C-SSEEEESTT
T ss_pred HHHHHHHHHHHhCchhcCc-C-CceEEeCcc
Confidence 8999999998886433322 2 888988876
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.64 E-value=5e-15 Score=136.70 Aligned_cols=213 Identities=16% Similarity=0.135 Sum_probs=143.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.++++|++.|. +|++..|++. +++ ++ .+ .-++..
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~---~V~~~~r~~~------~l~-~~---------~~----------~~~~~~ 53 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGA---RLVACDIEEG------PLR-EA---------AE----------AVGAHP 53 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH-HH---------HH----------TTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHH-HH---------HH----------HcCCeE
Confidence 5799999999999999999999999996 5588888632 222 11 11 134678
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ ++..++++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.+..
T Consensus 54 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 126 (242)
T d1ulsa_ 54 VVMDVAD-------PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126 (242)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEecCC-------HHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc
Confidence 8999994 44443433 369999999997642 25688999999999999998876532
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-..++.+||+...+. .
T Consensus 127 ~~~~i~~~ss~~~~~~---------------------------------------------------------------~ 143 (242)
T d1ulsa_ 127 NPGSIVLTASRVYLGN---------------------------------------------------------------L 143 (242)
T ss_dssp CCEEEEEECCGGGGCC---------------------------------------------------------------T
T ss_pred ccceeeeeccccccCC---------------------------------------------------------------C
Confidence 2345666776432221 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..|+++..|.|+.|-.+.....+. .....+..... ..-
T Consensus 144 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~-----~~~~~~~~~~p-------------l~R 205 (242)
T d1ulsa_ 144 GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE-----KVREKAIAATP-------------LGR 205 (242)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH-----HHHHHHHHTCT-------------TCS
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH-----HHHHHHHhcCC-------------CCC
Confidence 2457999999988887754 458999999999987655432211 00111111111 112
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|+++..++.+...-- + |+++.+.+|
T Consensus 206 ~~~pedia~~v~fL~S~~s~~i-t-G~~i~vDGG 237 (242)
T d1ulsa_ 206 AGKPLEVAYAALFLLSDESSFI-T-GQVLFVDGG 237 (242)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCHHHHHHHHHHHhchhhCCC-C-CcEEEECCC
Confidence 4567899999998886433322 2 889998887
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.64 E-value=1.9e-15 Score=140.03 Aligned_cols=220 Identities=15% Similarity=0.086 Sum_probs=144.1
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.++||++|||||++-||+.++++|++.|. +|++..|+++. .+..+ + .+..
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~---~V~~~~~~~~~---~~~~~--------------~----------~~~~ 51 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGA---LVALCDLRPEG---KEVAE--------------A----------IGGA 51 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTH---HHHHH--------------H----------HTCE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH--------------H----------cCCe
Confidence 47899999999999999999999999996 55888886532 11111 0 2345
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
.+++|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+.++.+++....
T Consensus 52 ~~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~ 124 (248)
T d2d1ya1 52 FFQVDLED-------ERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK 124 (248)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCC-------HHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccc
Confidence 68899994 43333333 379999999997643 25688899999999999998875431
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|++||.......
T Consensus 125 ~~~G~Ii~isS~~~~~~~-------------------------------------------------------------- 142 (248)
T d2d1ya1 125 VGGGAIVNVASVQGLFAE-------------------------------------------------------------- 142 (248)
T ss_dssp TTCEEEEEECCGGGTSBC--------------------------------------------------------------
T ss_pred cccccccccccccccccc--------------------------------------------------------------
Confidence 23589999986543221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+.... ..............+ .+.....
T Consensus 143 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~~~---------~~~~pl~ 210 (248)
T d2d1ya1 143 QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE---AIALSPDPERTRRDW---------EDLHALR 210 (248)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHC--------CHHH---------HTTSTTS
T ss_pred cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHH---HhhcCCCHHHHHHHH---------HhcCCCC
Confidence 23457999999988887654 468999999998876532100 000000000000000 0111111
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|+++..++.+...-- + |+++.+.+|
T Consensus 211 R~~~pedia~~v~fL~S~~s~~i-t-G~~i~vDGG 243 (248)
T d2d1ya1 211 RLGKPEEVAEAVLFLASEKASFI-T-GAILPVDGG 243 (248)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhcCC-C-CcEEEcCcC
Confidence 35568999999998886433322 2 889999887
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.64 E-value=3.3e-15 Score=139.33 Aligned_cols=225 Identities=16% Similarity=0.145 Sum_probs=146.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++.||+.++++|++.|. +|++..|++... +... +.+++. ..++.+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~---~V~i~~r~~~~l---~~~~---------~~~~~~---------~~~~~~ 59 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGA---RVYTCSRNEKEL---DECL---------EIWREK---------GLNVEG 59 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHHH---HHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHH---------HHHHhc---------CCCceE
Confidence 6899999999999999999999999996 558888864221 1111 111111 256788
Q ss_pred EecCCCCCCCCCCchhhHHHhc--------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMW--------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~--------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|+++ .+..++++ ..+|+++|+|+.... .+.++..+++|+.++..+.+++....
T Consensus 60 ~~~D~s~-------~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~ 132 (258)
T d1ae1a_ 60 SVCDLLS-------RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA 132 (258)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccc
Confidence 9999995 33332322 248999999997642 25788999999999999988775431
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+..++|++||.......
T Consensus 133 ~~~g~ii~isS~~~~~~~-------------------------------------------------------------- 150 (258)
T d1ae1a_ 133 SQNGNVIFLSSIAGFSAL-------------------------------------------------------------- 150 (258)
T ss_dssp HTSEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred cccccccccccccccccc--------------------------------------------------------------
Confidence 44589999986553221
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.+|+..+.+.+.. ..++++..|.|+.|..+..+... .........+..+.... ...
T Consensus 151 ~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~---~~~~~~~~~~~~~~~~~---------plg 218 (258)
T d1ae1a_ 151 PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI---KKNPHQKEEIDNFIVKT---------PMG 218 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHS---------TTC
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhh---hhhhhhHHHHHHHHhcC---------CCC
Confidence 13458999999988888755 45899999999999776432211 11111112222211100 111
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++.+....-. |+.+.+.+|
T Consensus 219 R~~~pediA~~v~fL~S~~s~~it--G~~i~vDGG 251 (258)
T d1ae1a_ 219 RAGKPQEVSALIAFLCFPAASYIT--GQIIWADGG 251 (258)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhChhhCCCc--CcEEEeCCC
Confidence 367899999999998864333221 788888876
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=5.3e-15 Score=137.66 Aligned_cols=221 Identities=17% Similarity=0.145 Sum_probs=147.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||++++++|++.|. +|++..|++.. .+.+.+++ ++ ...++.+
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~~~---~~~~~~~l---------~~---------~g~~~~~ 64 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINADA---ANHVVDEI---------QQ---------LGGQAFA 64 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESCHHH---HHHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------HH---------cCCcEEE
Confidence 6899999999999999999999999996 55888875422 22222111 11 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc------chhHHHHHHHhHHHHHHHHHHHHhc-c--c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF------DERYDVALDLNTFGAKHVLNFSKKC-A--K 153 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~------~~~~~~~~~~Nv~gt~~ll~~a~~~-~--~ 153 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+... . +
T Consensus 65 ~~~Dvs~-------~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~ 137 (255)
T d1fmca_ 65 CRCDITS-------EQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc
Confidence 9999995 33333332 479999999997532 2568899999999999998866442 1 2
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|.+||....... ..
T Consensus 138 ~g~Ii~isS~~~~~~~--------------------------------------------------------------~~ 155 (255)
T d1fmca_ 138 GGVILTITSMAAENKN--------------------------------------------------------------IN 155 (255)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------------TT
T ss_pred ccccccccccchhccc--------------------------------------------------------------cc
Confidence 3478898885443221 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
...|+.||+..+.+.+.. ..|+++..|-|+.|-.+..... .. ......+... .| ..-+
T Consensus 156 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~-------~~-~e~~~~~~~~----~p-----l~R~ 218 (255)
T d1fmca_ 156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-------IT-PEIEQKMLQH----TP-----IRRL 218 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-------CC-HHHHHHHHHT----CS-----SCSC
T ss_pred cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc-------CC-HHHHHHHHhc----CC-----CCCC
Confidence 458999999998887654 4689999999998865432110 00 1111111110 01 1124
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCC
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSL 342 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~ 342 (492)
...+|+|+++..++.....-- + |+++.+.+|.
T Consensus 219 g~pedvA~~v~fL~S~~s~~i-t-G~~i~vDGG~ 250 (255)
T d1fmca_ 219 GQPQDIANAALFLCSPAASWV-S-GQILTVSGGG 250 (255)
T ss_dssp BCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTTS
T ss_pred cCHHHHHHHHHHHhCchhcCC-c-CCEEEECcCc
Confidence 567999999999886433222 2 8899998883
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.63 E-value=7.8e-15 Score=137.10 Aligned_cols=233 Identities=14% Similarity=0.121 Sum_probs=145.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++-||+.++++|++.|. +|++..|+... ..+.+.++ +.++ ...++.+
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga---~V~~~~r~~~~--~~~~~~~~---------~~~~--------~g~~~~~ 59 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGA---DIVLNGFGDAA--EIEKVRAG---------LAAQ--------HGVKVLY 59 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEECCSCHH--HHHHHHHH---------HHHH--------HTSCEEE
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCcHH--HHHHHHHH---------HHHh--------cCCcEEE
Confidence 6899999999999999999999999996 55787776421 12222211 1111 1367899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+....
T Consensus 60 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 132 (260)
T d1x1ta1 60 DGADLSK-------GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132 (260)
T ss_dssp ECCCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc
Confidence 9999994 44444443 369999999997532 25688999999999998888765431
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|.+||....... .
T Consensus 133 ~~G~Iv~isS~~~~~~~--------------------------------------------------------------~ 150 (260)
T d1x1ta1 133 GFGRIINIASAHGLVAS--------------------------------------------------------------A 150 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCceEeecccccceecc--------------------------------------------------------------C
Confidence 23589999986543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..|+.+..|.|+.|-.+..+..........+...- . .............-
T Consensus 151 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~Pl~R 224 (260)
T d1x1ta1 151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQE--T----AARELLSEKQPSLQ 224 (260)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------------CHHHHCTTCC
T ss_pred CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChH--H----HHHHHHHhcCCCCC
Confidence 2457999999988887654 46899999999998765432111000000000000 0 00000000001113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++.+....-. |+++.+.+|
T Consensus 225 ~g~pediA~~v~fL~S~~a~~it--G~~i~vDGG 256 (260)
T d1x1ta1 225 FVTPEQLGGTAVFLASDAAAQIT--GTTVSVDGG 256 (260)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhChhhCCCc--CCEEEECcc
Confidence 56689999999988864433222 889998877
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.62 E-value=2e-14 Score=134.90 Aligned_cols=225 Identities=19% Similarity=0.216 Sum_probs=147.9
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-++||++|||||++.||+.++++|++.|. +|++..|+.. ..+.+.+++ .. ..++.
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga---~V~i~~r~~~---~~~~~~~~l-------------~~------~~~~~ 57 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGA---KVVIADIADD---HGQKVCNNI-------------GS------PDVIS 57 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH---HHHHHHHHH-------------CC------TTTEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH---HHHHHHHHh-------------cC------CCceE
Confidence 37899999999999999999999999996 5588888532 122222111 10 24578
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhcc
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF---------DERYDVALDLNTFGAKHVLNFSKKCA 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (492)
++.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.+..
T Consensus 58 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m 130 (268)
T d2bgka1 58 FVHCDVTK-------DEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVM 130 (268)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchH
Confidence 89999994 44444443 379999999996431 14578899999999999988775421
Q ss_pred ---cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 153 ---KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 153 ---~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
+-.++|.+||........
T Consensus 131 ~~~~~g~ii~iss~~~~~~~~----------------------------------------------------------- 151 (268)
T d2bgka1 131 IPAKKGSIVFTASISSFTAGE----------------------------------------------------------- 151 (268)
T ss_dssp GGGTCEEEEEECCGGGTCCCT-----------------------------------------------------------
T ss_pred hhcCCCCcccccccccccccc-----------------------------------------------------------
Confidence 334788888754332110
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
+....|+.||+..+.+.+.. ..|+++..|.|+.|-.+......+. ............. ..
T Consensus 152 --~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~------~~~~~~~~~~~~~-------~~ 216 (268)
T d2bgka1 152 --GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV------DSSRVEELAHQAA-------NL 216 (268)
T ss_dssp --TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC------CHHHHHHHHHHTC-------SS
T ss_pred --ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcC------CHHHHHHHHHhcc-------cc
Confidence 12347999999998888755 4689999999999877654322111 0111111000000 00
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|++++.++.+...-- + |+++.+.+|
T Consensus 217 ~gr~~~pedvA~~v~fL~S~~s~~i-t-Gq~i~VDGG 251 (268)
T d2bgka1 217 KGTLLRAEDVADAVAYLAGDESKYV-S-GLNLVIDGG 251 (268)
T ss_dssp CSCCCCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHhChhhCCc-c-CceEEECcC
Confidence 1125668999999999886443322 2 889999887
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.61 E-value=4.3e-15 Score=138.69 Aligned_cols=224 Identities=18% Similarity=0.160 Sum_probs=146.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.++++|++.|. +|++..|++.. .+.+.++ +++. ..++..
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~~~---l~~~~~~---------~~~~---------g~~~~~ 61 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGA---SVYTCSRNQKE---LNDCLTQ---------WRSK---------GFKVEA 61 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHhc---------CCCceE
Confidence 5799999999999999999999999996 55888885322 1111111 1111 256788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------c-CccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------N-KLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~-~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|+++ ++..+.++ . .+|++||+||.... .+.++..+++|+.|+..+.+.+....
T Consensus 62 ~~~Dv~~-------~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~ 134 (259)
T d2ae2a_ 62 SVCDLSS-------RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA 134 (259)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhh
Confidence 9999994 33333322 2 58999999997543 25688899999999999988775531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|++||.......
T Consensus 135 ~~~G~Ii~isS~~~~~~~-------------------------------------------------------------- 152 (259)
T d2ae2a_ 135 SERGNVVFISSVSGALAV-------------------------------------------------------------- 152 (259)
T ss_dssp TSSEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred hccccccccccccccccc--------------------------------------------------------------
Confidence 33589999996543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..++++..|.|+.|-.+..+... .. ......+..+... . ...
T Consensus 153 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---~~-~~~~~~~~~~~~~----~-----pl~ 219 (259)
T d2ae2a_ 153 PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTI---QD-PEQKENLNKLIDR----C-----ALR 219 (259)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHT---TS-HHHHHHHHHHHHT----S-----TTC
T ss_pred ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhh---hc-hhhHHHHHHHHhc----C-----CCC
Confidence 23468999999988887754 45899999999988654321100 00 0001111111110 0 011
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++.....-- + |+++.+.+|
T Consensus 220 R~g~pedvA~~v~fL~S~~s~~i-t-G~~i~VDGG 252 (259)
T d2ae2a_ 220 RMGEPKELAAMVAFLCFPAASYV-T-GQIIYVDGG 252 (259)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhCCC-c-CcEEEECCC
Confidence 24567999999998886433322 2 888988877
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.61 E-value=9.2e-15 Score=135.72 Aligned_cols=219 Identities=15% Similarity=0.166 Sum_probs=146.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.+|.+|||||++-||+.++++|++.|. +|++..|++.. .+.+.+++ ++ ...++..
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~Ga---~V~~~~r~~~~---l~~~~~~l---------~~---------~g~~~~~ 63 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSVS---HVICISRTQKS---CDSVVDEI---------KS---------FGYESSG 63 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS---EEEEEESSHHH---HHHHHHHH---------HT---------TTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 4689999999999999999999999996 55888885422 22222111 11 1256889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ ++..+.++ .++|++||+|+.... .+.++..+++|+.|+..+.+++....
T Consensus 64 ~~~Dvt~-------~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 136 (251)
T d2c07a1 64 YAGDVSK-------KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN 136 (251)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC
Confidence 9999994 44443433 479999999997543 25688999999999999888765421
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||....... .
T Consensus 137 ~~G~IVnisS~~~~~~~--------------------------------------------------------------~ 154 (251)
T d2c07a1 137 RYGRIINISSIVGLTGN--------------------------------------------------------------V 154 (251)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------------T
T ss_pred CCeEEEEECCHHhcCCC--------------------------------------------------------------C
Confidence 34589999996543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+..+ ......+... . ...-
T Consensus 155 ~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~---------~~~~~~~~~~----~-----pl~R 216 (251)
T d2c07a1 155 GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---------EQIKKNIISN----I-----PAGR 216 (251)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---------HHHHHHHHTT----C-----TTSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccC---------HHHHHHHHhc----C-----CCCC
Confidence 2357999999999888755 46899999999998765432211 1122111111 0 1112
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++.+...--. |+++.+.+|
T Consensus 217 ~~~pedvA~~v~fL~S~~s~~it--G~~i~vDGG 248 (251)
T d2c07a1 217 MGTPEEVANLACFLSSDKSGYIN--GRVFVIDGG 248 (251)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhCCCc--CcEEEECCC
Confidence 56689999999888864433222 888988877
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.61 E-value=2.7e-15 Score=139.88 Aligned_cols=225 Identities=16% Similarity=0.191 Sum_probs=145.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++.||+.++++|++.|. +|++..|+.. ..+.+. ++ +..++..
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~---~l~~~~-------------~~--------~~~~~~~ 55 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGA---RVAIADINLE---AARATA-------------AE--------IGPAACA 55 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTE---EEEEEESCHH---HHHHHH-------------HH--------HCTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH---HHHHHH-------------HH--------hCCceEE
Confidence 5799999999999999999999999996 5578877532 111111 11 1367889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-c-c-
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK-C-A- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~-~- 152 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.. + +
T Consensus 56 ~~~Dvt~-------~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~ 128 (256)
T d1k2wa_ 56 IALDVTD-------QASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAG 128 (256)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHh
Confidence 9999994 44444443 369999999997643 256889999999999999886433 2 1
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|++||.......
T Consensus 129 ~~~g~Iv~isS~~~~~~~-------------------------------------------------------------- 146 (256)
T d1k2wa_ 129 GRGGKIINMASQAGRRGE-------------------------------------------------------------- 146 (256)
T ss_dssp TSCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred ccCCccccccchhhcccc--------------------------------------------------------------
Confidence 23589999986533211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCc-cccCcC-chHHHHHhccCceeeEEecCCCc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPG-WAEGIR-TIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~g-w~~~~~-~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+.... +.+... ........+... ..
T Consensus 147 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~P 217 (256)
T d1k2wa_ 147 ALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAA---------VP 217 (256)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHH---------ST
T ss_pred ccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhc---------CC
Confidence 23458999999998888654 468999999999877654211000 000000 000000000000 00
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|++++.++.....-- + |+++.+.+|
T Consensus 218 lgR~~~p~evA~~v~fL~S~~a~~i-T-G~~i~vDGG 252 (256)
T d1k2wa_ 218 FGRMGRAEDLTGMAIFLATPEADYI-V-AQTYNVDGG 252 (256)
T ss_dssp TSSCBCHHHHHHHHHHTTSGGGTTC-C-SCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHhCchhCCc-c-CceEEECcc
Confidence 1124567999999998776433222 2 888998887
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.61 E-value=2.1e-14 Score=133.91 Aligned_cols=222 Identities=17% Similarity=0.108 Sum_probs=146.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++.||+.++++|++.|. +|++..|+... ..+.+.++ +++ ...++..
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~---~Vv~~~r~~~~--~~~~~~~~---------~~~---------~g~~~~~ 61 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKA---KVVVNYRSKED--EANSVLEE---------IKK---------VGGEAIA 61 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHH---------HHH---------TTCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcHH--HHHHHHHH---------HHh---------cCCcEEE
Confidence 6899999999999999999999999996 55888886432 11222111 111 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-c---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK-C--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--- 151 (492)
+.+|+++ ++..++++ .++|++||+||.... .+.++..+++|+.|+..+.+.+.. +
T Consensus 62 ~~~Dvt~-------~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 134 (261)
T d1geea_ 62 VKGDVTV-------ESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134 (261)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccc
Confidence 9999994 44444443 379999999997643 256889999999999998887654 2
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+.-..+|.+||.......
T Consensus 135 ~~g~~Iv~isS~~~~~~~-------------------------------------------------------------- 152 (261)
T d1geea_ 135 DIKGTVINMSSVHEKIPW-------------------------------------------------------------- 152 (261)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred cccccccccccchhcccC--------------------------------------------------------------
Confidence 122358889986433211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+.... . .........+.. .....
T Consensus 153 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~------~-~~~~~~~~~~~~---------~~pl~ 216 (261)
T d1geea_ 153 PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE------K-FADPEQRADVES---------MIPMG 216 (261)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH------H-HHSHHHHHHHHT---------TCTTS
T ss_pred ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhh------h-cCCHHHHHHHHh---------cCCCC
Confidence 12457999999998887755 468999999999886543210 0 000111111111 00111
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++.....-- + |+++.+.+|
T Consensus 217 R~~~pediA~~v~fL~S~~s~~i-t-G~~i~vDGG 249 (261)
T d1geea_ 217 YIGEPEEIAAVAAWLASSEASYV-T-GITLFADGG 249 (261)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCchhcCC-c-CCeEEECCC
Confidence 24568999999998886433322 2 889999887
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=3.7e-15 Score=138.17 Aligned_cols=220 Identities=14% Similarity=0.084 Sum_probs=145.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++.||+.+++.|++.|. +|++..|++.. .+.+ .++ ..++.+
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~---~~~~-------------~~~---------~~~~~~ 55 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGA---RVVICDKDESG---GRAL-------------EQE---------LPGAVF 55 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHH-------------HHH---------CTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHH-------------HHh---------cCCCeE
Confidence 6899999999999999999999999996 55888775321 1221 222 146788
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC----cc----hhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN----FD----ERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~----~~----~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|+++ ++..+.++ .++|++||+||... +. +.++..+++|+.|+.++.+++....
T Consensus 56 ~~~Dvs~-------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~ 128 (250)
T d1ydea1 56 ILCDVTQ-------EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 128 (250)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHh
Confidence 9999994 44444443 36999999999542 11 4578999999999999988776432
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|.+||....... .
T Consensus 129 ~~G~Ii~isS~~~~~~~--------------------------------------------------------------~ 146 (250)
T d1ydea1 129 SQGNVINISSLVGAIGQ--------------------------------------------------------------A 146 (250)
T ss_dssp HTCEEEEECCHHHHHCC--------------------------------------------------------------T
T ss_pred CCCCCcccccccccccc--------------------------------------------------------------c
Confidence 12489999986543211 2
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
....|+.||+..+.+.+.. ..++++..|.|+.|-.+..+.... ........+...... ....-
T Consensus 147 ~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~---~~~~~~~~~~~~~~~---------~pl~R 214 (250)
T d1ydea1 147 QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAA---LMPDPRASIREGMLA---------QPLGR 214 (250)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHT---TSSSHHHHHHHHHHT---------STTSS
T ss_pred CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhh---cCCCHHHHHHHHHhc---------CCCCC
Confidence 3458999999988887654 568999999999886432110000 000111111111100 01113
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+...+|+|++++.++.+ ..-- + |+++.+.+|
T Consensus 215 ~g~p~eva~~v~fL~Sd-a~~i-t-G~~i~vDGG 245 (250)
T d1ydea1 215 MGQPAEVGAAAVFLASE-ANFC-T-GIELLVTGG 245 (250)
T ss_dssp CBCHHHHHHHHHHHHHH-CTTC-C-SCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCc-cCCC-c-CCeEEECCC
Confidence 56789999999988753 3222 2 889998887
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.60 E-value=1.6e-14 Score=134.61 Aligned_cols=220 Identities=17% Similarity=0.138 Sum_probs=136.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.++++|++.|. +|++..|++.. .+...+ .+.+. ..++..
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~Ga---~V~~~~r~~~~---l~~~~~---------~~~~~---------~~~~~~ 61 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGA---VIHTCARNEYE---LNECLS---------KWQKK---------GFQVTG 61 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHH---------HHHhc---------CCceEE
Confidence 5899999999999999999999999996 56888886432 111111 11111 257899
Q ss_pred EecCCCCCCCCCCchhhHHHhc--------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMW--------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~--------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+....
T Consensus 62 ~~~Dv~~-------~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 134 (259)
T d1xq1a_ 62 SVCDASL-------RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA 134 (259)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCC-------HHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccc
Confidence 9999995 33332322 358999999997642 25688999999999999988775531
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|++||.......
T Consensus 135 ~~~G~Iv~isS~~~~~~~-------------------------------------------------------------- 152 (259)
T d1xq1a_ 135 SGCGNIIFMSSIAGVVSA-------------------------------------------------------------- 152 (259)
T ss_dssp HSSCEEEEEC----------------------------------------------------------------------
T ss_pred cccccccccccccccccc--------------------------------------------------------------
Confidence 33589999985543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..|+++..|-|+.|-.+..+... . ......+ ....| ..
T Consensus 153 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~---~-----~~~~~~~----~~~~p-----l~ 215 (259)
T d1xq1a_ 153 SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---D-----DEFKKVV----ISRKP-----LG 215 (259)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------------
T ss_pred cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc---h-----HHHHHHH----HhCCC-----CC
Confidence 12457999999998887654 56899999999988665432110 0 0000000 00001 11
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++.+...-- + |++..+.+|
T Consensus 216 R~~~pedvA~~v~fL~S~~s~~i-T-G~~i~vDGG 248 (259)
T d1xq1a_ 216 RFGEPEEVSSLVAFLCMPAASYI-T-GQTICVDGG 248 (259)
T ss_dssp --CCGGGGHHHHHHHTSGGGTTC-C-SCEEECCCC
T ss_pred CCcCHHHHHHHHHHHhCchhcCC-c-CcEEEeCCC
Confidence 24557899999998886433222 2 788888777
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.59 E-value=3.2e-14 Score=130.62 Aligned_cols=212 Identities=12% Similarity=0.089 Sum_probs=143.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++-||+.++++|++.|. +|++..|++ +.++ ....++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga---~V~~~~r~~------~~l~------------------------~~~~~~ 48 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGA---EVTICARNE------ELLK------------------------RSGHRY 48 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHH------------------------HTCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHH------------------------hcCCcE
Confidence 5799999999999999999999999996 558888853 2222 133456
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---cceeEEE
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---KLIVLVH 159 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~~~V~ 159 (492)
+.+|+++ +.+...+-+.++|++||+||.... .+.++..+++|+.++..+.+.+.... +-.++|.
T Consensus 49 ~~~Dv~~------~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~ 122 (234)
T d1o5ia_ 49 VVCDLRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVA 122 (234)
T ss_dssp EECCTTT------CHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEcchHH------HHHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccc
Confidence 7899985 333344556789999999996533 25678899999999988888764421 3357898
Q ss_pred eeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 160 VSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 160 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
+||....... .....|+.
T Consensus 123 i~S~~~~~~~--------------------------------------------------------------~~~~~Y~a 140 (234)
T d1o5ia_ 123 ITSFSVISPI--------------------------------------------------------------ENLYTSNS 140 (234)
T ss_dssp ECCGGGTSCC--------------------------------------------------------------TTBHHHHH
T ss_pred cccccccccc--------------------------------------------------------------cccccchh
Confidence 8886433221 23457999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhh
Q 037479 240 TKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 240 sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddv 314 (492)
||+..+.+.+.. ..|+++..|.|+.|-.+..... .+ ......+.. .....-+...+|+
T Consensus 141 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~---~~-----~~~~~~~~~---------~~pl~R~~~pedi 203 (234)
T d1o5ia_ 141 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKEL---LS-----EEKKKQVES---------QIPMRRMAKPEEI 203 (234)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH---SC-----HHHHHHHHT---------TSTTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhh---cC-----HHHHHHHHh---------cCCCCCCcCHHHH
Confidence 999888777654 4589999999998765432110 00 011111111 1111235678999
Q ss_pred hhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 315 VNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 315 a~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
|+++..++.+...-- + |+++.+.+|
T Consensus 204 A~~v~fL~S~~s~~i-t-G~~i~vDGG 228 (234)
T d1o5ia_ 204 ASVVAFLCSEKASYL-T-GQTIVVDGG 228 (234)
T ss_dssp HHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred HHHHHHHhChhhcCC-c-CcEEEECcc
Confidence 999998886433322 2 889999887
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.58 E-value=5.1e-14 Score=130.62 Aligned_cols=219 Identities=13% Similarity=0.147 Sum_probs=145.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++.||+.++++|++.|. +|++..|+.+ ..+.+.+++ . ...++.+
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~---~~~~~~~~~-------------~------~~~~~~~ 58 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGA---KVMITGRHSD---VGEKAAKSV-------------G------TPDQIQF 58 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHH---HHHHHHHHH-------------C------CTTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH---HHHHHHHHh-------------C------CCCcEEE
Confidence 6899999999999999999999999996 5588888532 122222111 1 0257899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-c--
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-A-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 59 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~ 131 (251)
T d1zk4a1 59 FQHDSSD-------EDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK 131 (251)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhc
Confidence 9999994 44333333 369999999997532 2567889999999999998876542 1
Q ss_pred c-ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 K-LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 ~-~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+ -.++|.+||.......
T Consensus 132 ~~gg~Ii~isS~~~~~~~-------------------------------------------------------------- 149 (251)
T d1zk4a1 132 GLGASIINMSSIEGFVGD-------------------------------------------------------------- 149 (251)
T ss_dssp SSCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred CCCCceEeeeccceeccC--------------------------------------------------------------
Confidence 2 2378999985433111
Q ss_pred CCCchHHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+..+ .... ...... ...
T Consensus 150 ~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~-------~~~~-~~~~~~---------~~p 212 (251)
T d1zk4a1 150 PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-------GAEE-AMSQRT---------KTP 212 (251)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-------THHH-HHTSTT---------TCT
T ss_pred CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC-------CHHH-HHHHHh---------CCC
Confidence 12458999999888776532 35899999999988654322111 1111 111110 001
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|++++.++.....-- + |+++.+.+|
T Consensus 213 l~R~~~pedvA~~v~fL~S~~s~~i-t-G~~i~vDGG 247 (251)
T d1zk4a1 213 MGHIGEPNDIAYICVYLASNESKFA-T-GSEFVVDGG 247 (251)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHhCchhCCC-c-CcEEEECcc
Confidence 1125678999999998886433322 2 889998877
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=5.6e-14 Score=133.52 Aligned_cols=228 Identities=12% Similarity=0.076 Sum_probs=147.6
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.++||++|||||++-||+.+++.|++.|. +|++..|+.... +.. .+.|+.+.+ .....++.
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga---~Vvi~~r~~~~l---~~~---------~~el~~~~~----~~~~~~~~ 69 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGS---NVVIASRKLERL---KSA---------ADELQANLP----PTKQARVI 69 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHH---HHH---------HHHHHHTSC----TTCCCCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHH---HHH---------HHHHHhhhc----cccCceEE
Confidence 47899999999999999999999999996 568888864321 111 112222221 11135789
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-c-
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-A- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~- 152 (492)
.+.+|+++ ++..+.++ .++|++||+|+.... .+.++..+++|+.|+..+.+.+... .
T Consensus 70 ~~~~Dvs~-------~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~ 142 (297)
T d1yxma1 70 PIQCNIRN-------EEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMK 142 (297)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHH
T ss_pred EEeccCCC-------HHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcc
Confidence 99999994 44333333 379999999996542 2568899999999999998887542 1
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|.+|++...+.
T Consensus 143 ~~~g~Ii~~ss~~~~~~--------------------------------------------------------------- 159 (297)
T d1yxma1 143 EHGGSIVNIIVPTKAGF--------------------------------------------------------------- 159 (297)
T ss_dssp HHCEEEEEECCCCTTCC---------------------------------------------------------------
T ss_pred ccccccccccccccccc---------------------------------------------------------------
Confidence 2346777766422211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|..+......+- ......... ....| ..
T Consensus 160 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~----~~~~p-----lg 225 (297)
T d1yxma1 160 PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS-----WGQSFFEGS----FQKIP-----AK 225 (297)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGG-----GGGGGGTTG----GGGST-----TS
T ss_pred cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccc-----cCHHHHHHH----HhcCC-----CC
Confidence 23457999999888887754 4689999999999876543111100 000111111 10111 11
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++.+...-- + |+++.+.+|
T Consensus 226 R~g~pedvA~~v~fL~Sd~s~~i-T-G~~i~VDGG 258 (297)
T d1yxma1 226 RIGVPEEVSSVVCFLLSPAASFI-T-GQSVDVDGG 258 (297)
T ss_dssp SCBCTHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhcCc-C-CcEEEeCcC
Confidence 24567899999999887443322 2 889999887
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.58 E-value=3.1e-14 Score=133.27 Aligned_cols=231 Identities=15% Similarity=0.132 Sum_probs=140.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||.+|||||++-||+.++++|++.|. +|++..|+... .+.+.+++ ++... ...++..
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~~---l~~~~~~l---------~~~~~------~~~~~~~ 61 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGA---KVTITGRHAER---LEETRQQI---------LAAGV------SEQNVNS 61 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HHTTC------CGGGEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------HhcCC------CcCceEE
Confidence 6899999999999999999999999996 55888886432 22222122 11110 1256899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 62 ~~~Dvt~-------~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~ 134 (264)
T d1spxa_ 62 VVADVTT-------DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH 134 (264)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCc
Confidence 9999994 44343433 369999999996421 1457889999999999998887653
Q ss_pred c--cceeEEEeeecee-ecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 152 A--KLIVLVHVSTAFV-WGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 152 ~--~~~~~V~vST~~v-~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
. +-..+|.++|... ....
T Consensus 135 m~~~~g~iI~~~S~~~~~~~~----------------------------------------------------------- 155 (264)
T d1spxa_ 135 LSSTKGEIVNISSIASGLHAT----------------------------------------------------------- 155 (264)
T ss_dssp HHHHTCEEEEECCTTSSSSCC-----------------------------------------------------------
T ss_pred cccccCcceeeeeeccccccC-----------------------------------------------------------
Confidence 2 2235565555322 1110
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+........-............+.. ..|
T Consensus 156 ---~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~----~~P---- 224 (264)
T d1spxa_ 156 ---PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE----CVP---- 224 (264)
T ss_dssp ---TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH----HCT----
T ss_pred ---CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHh----cCC----
Confidence 12346999999988887654 45899999999998765432111000000111111111100 000
Q ss_pred cccceeehhhhhhHHHHHHHhh-hcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAH-AKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~-~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|++++.++.++ ..-- + |+++.+.+|
T Consensus 225 -l~R~g~pedvA~~v~fL~S~~~s~~i-t-G~~i~vDGG 260 (264)
T d1spxa_ 225 -AGVMGQPQDIAEVIAFLADRKTSSYI-I-GHQLVVDGG 260 (264)
T ss_dssp -TSSCBCHHHHHHHHHHHHCHHHHTTC-C-SCEEEESTT
T ss_pred -CCCCcCHHHHHHHHHHHhCCcccCCc-c-CceEEeCCC
Confidence 112456799999999888533 2212 1 888988877
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.58 E-value=1.1e-14 Score=135.63 Aligned_cols=229 Identities=12% Similarity=0.069 Sum_probs=147.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.++++|++.|. +|++..|+... .+...+ .+.+..+ ..++..
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~---l~~~~~---------~~~~~~~-------~~~~~~ 59 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGA---KLSLVDVSSEG---LEASKA---------AVLETAP-------DAEVLT 59 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHHCT-------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHH---------HHHhhCC-------CCeEEE
Confidence 5899999999999999999999999996 55888886432 111111 1111111 257889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC----c----chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN----F----DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~----~----~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
+.+|+++ ++..+.++ .++|++||+||... + .+.++..+++|+.|+..+.+.+....
T Consensus 60 ~~~Dvt~-------~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 132 (258)
T d1iy8a_ 60 TVADVSD-------EAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE 132 (258)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EeccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhh
Confidence 9999994 44443443 46999999999642 2 15688999999999999998774421
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|.+||.......
T Consensus 133 ~~~G~Ii~isS~~~~~~~-------------------------------------------------------------- 150 (258)
T d1iy8a_ 133 QGSGMVVNTASVGGIRGI-------------------------------------------------------------- 150 (258)
T ss_dssp HTCCEEEEECCGGGTSBC--------------------------------------------------------------
T ss_pred hcCCCCcccccHhhccCC--------------------------------------------------------------
Confidence 33479999986543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|..+..+........ .........+... ....
T Consensus 151 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~---------~pl~ 220 (258)
T d1iy8a_ 151 GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP-ENPRKAAEEFIQV---------NPSK 220 (258)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCT-TCHHHHHHHHHTT---------CTTC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCc-ccHHHHHHHHHhc---------CCCC
Confidence 12458999999988887654 4589999999998865432100000000 0111111111111 0111
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++......- + |++..+.+|
T Consensus 221 R~~~p~dvA~~v~fL~S~~s~~i-t-G~~i~VDGG 253 (258)
T d1iy8a_ 221 RYGEAPEIAAVVAFLLSDDASYV-N-ATVVPIDGG 253 (258)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTC-C-SCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhcCC-c-CceEEcCcc
Confidence 24568999999998886433322 2 889999887
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.58 E-value=3e-14 Score=133.01 Aligned_cols=228 Identities=14% Similarity=0.056 Sum_probs=145.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++.||+.+++.|++.|. +|++..|++.. .+.+.+++ ++ ...++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~~~---l~~~~~~~---------~~---------~g~~~~~ 58 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGT---AIALLDMNREA---LEKAEASV---------RE---------KGVEARS 58 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HT---------TTSCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 6899999999999999999999999996 55888886422 22222111 11 1257889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 59 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~ 131 (260)
T d1zema1 59 YVCDVTS-------EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMIT 131 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhh
Confidence 9999994 43333333 379999999996532 1567889999999999998877542
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
.+-.++|++||.......
T Consensus 132 ~~~G~II~isS~~~~~~~-------------------------------------------------------------- 149 (260)
T d1zema1 132 QNYGRIVNTASMAGVKGP-------------------------------------------------------------- 149 (260)
T ss_dssp HTCEEEEEECCHHHHSCC--------------------------------------------------------------
T ss_pred hcCCCCCeeechhhccCC--------------------------------------------------------------
Confidence 133589999996543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-C-----ccccC-cCchHHHHHhccCceeeEEe
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-P-----GWAEG-IRTIDSLAVGYGKGRLTCFL 299 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~-----gw~~~-~~~~~~~~~~~~~g~~~~~~ 299 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..... . .+... ......+...+....
T Consensus 150 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 224 (260)
T d1zema1 150 PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV----- 224 (260)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS-----
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC-----
Confidence 12357999999998887754 4689999999999876421000 0 00000 011111111111100
Q ss_pred cCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 300 GDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 300 ~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...-+...+|+|++++.++......-. |+++.+.+|
T Consensus 225 ----Pl~R~g~pedvA~~v~fL~S~~s~~it--G~~i~VDGG 260 (260)
T d1zema1 225 ----PMRRYGDINEIPGVVAFLLGDDSSFMT--GVNLPIAGG 260 (260)
T ss_dssp ----TTSSCBCGGGSHHHHHHHHSGGGTTCC--SCEEEESCC
T ss_pred ----CCCCCcCHHHHHHHHHHHhCchhcCcc--CCeEEeCCC
Confidence 011245679999999998874333221 777877654
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.57 E-value=8.8e-14 Score=129.81 Aligned_cols=227 Identities=13% Similarity=0.133 Sum_probs=146.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++.||+.++++|++.|. +|++..|+..... ...++ +.++. ..++..
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~~~---~~~~~---------~~~~~--------g~~~~~ 63 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAAGA---NVAVIYRSAADAV---EVTEK---------VGKEF--------GVKTKA 63 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCTTHH---HHHHH---------HHHHH--------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHH---HHHHH---------HHHHh--------CCceEE
Confidence 5899999999999999999999999996 5688888765421 11111 11111 367899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc----
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC---- 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (492)
+.+|+++ ++..+.++ .++|++||+|+.... .+.++..+++|+.|+..+.+.+.+.
T Consensus 64 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 136 (260)
T d1h5qa_ 64 YQCDVSN-------TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK 136 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccc
Confidence 9999994 44343433 379999999996532 2567889999999999888766442
Q ss_pred ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 152 AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 152 ~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
..-..++.+||.......... .. ..
T Consensus 137 ~~~g~i~~~~s~~~~~~~~~~----~~---------------------------------------------------~~ 161 (260)
T d1h5qa_ 137 QQKGSIVVTSSMSSQIINQSS----LN---------------------------------------------------GS 161 (260)
T ss_dssp TCCEEEEEECCGGGTSCCEEE----TT---------------------------------------------------EE
T ss_pred ccceEEEEeeccccccccccc----cc---------------------------------------------------cC
Confidence 133456666664433221100 00 00
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+.....+ ......+... .| ..
T Consensus 162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~---------~~~~~~~~~~----~p-----l~ 223 (260)
T d1h5qa_ 162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD---------KKIRDHQASN----IP-----LN 223 (260)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---------HHHHHHHHHT----CT-----TS
T ss_pred ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC---------HHHHHHHHhc----CC-----CC
Confidence 23457999999999887754 56899999999998654332111 1111111110 00 11
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|++++.++.+...-- + |+++.+.+|
T Consensus 224 R~g~pedvA~~v~fL~S~~s~~i-t-G~~i~VDGG 256 (260)
T d1h5qa_ 224 RFAQPEEMTGQAILLLSDHATYM-T-GGEYFIDGG 256 (260)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTTC-C-SCEEEECTT
T ss_pred CCcCHHHHHHHHHHHhcchhCCC-c-CceEEECCC
Confidence 24568999999998886443322 2 889998887
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.56 E-value=1.8e-14 Score=132.84 Aligned_cols=215 Identities=16% Similarity=0.120 Sum_probs=143.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++|||||+.||+.++++|+++|. +|++..|+.+ ++.+ +.++ +..++.+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~---~V~~~~r~~~------~~~~----------~~~~--------~~~~~~~ 55 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGA---SLVAVDREER------LLAE----------AVAA--------LEAEAIA 55 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHH----------HHHT--------CCSSEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHHH----------HHHH--------cCCceEE
Confidence 6899999999999999999999999996 5588888643 2211 1111 2367889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhccc-c
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCAK-L 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~-~ 154 (492)
+++|+++ ++..++++ .++|++||+|+.... .+.++..+++|+.++..+.+++..... -
T Consensus 56 ~~~Dls~-------~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~ 128 (241)
T d2a4ka1 56 VVADVSD-------PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 128 (241)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred EEecCCC-------HHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccc
Confidence 9999994 44443433 369999999987532 256788999999999999998766433 3
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
+.++.+||....... ..
T Consensus 129 ~~i~~~ss~a~~~~~---------------------------------------------------------------~~ 145 (241)
T d2a4ka1 129 GSLVLTGSVAGLGAF---------------------------------------------------------------GL 145 (241)
T ss_dssp CEEEEECCCTTCCHH---------------------------------------------------------------HH
T ss_pred cceeecccccccccc---------------------------------------------------------------Cc
Confidence 344445543221110 12
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccccee
Q 037479 235 NTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVI 309 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v 309 (492)
..|+.+|+..|.+.+.. ..|+++..|.|+.|-.+..... .......+.+. ...--+.
T Consensus 146 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~---------~~~~~~~~~~~---------~p~~r~~ 207 (241)
T d2a4ka1 146 AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL---------PPWAWEQEVGA---------SPLGRAG 207 (241)
T ss_dssp HHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---------CHHHHHHHHHT---------STTCSCB
T ss_pred cccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh---------hHhHHHHHHhC---------CCCCCCc
Confidence 46999999999888755 4589999999998854432111 11111111110 1111355
Q ss_pred ehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 310 PADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 310 ~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..+|+|+++..++.+...--. |++..+.+|
T Consensus 208 ~p~dva~~v~fL~S~~s~~it--G~~i~vDGG 237 (241)
T d2a4ka1 208 RPEEVAQAALFLLSEESAYIT--GQALYVDGG 237 (241)
T ss_dssp CHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CHHHHHHHHHHHhcchhCCCc--CceEEeCCC
Confidence 789999999998874433221 788888877
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.56 E-value=3.9e-14 Score=131.54 Aligned_cols=222 Identities=14% Similarity=0.074 Sum_probs=145.0
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-++||+++||||++-||+.++++|++.|. +|++..|++. ..+.+. ++ +..+..
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~~~~~---~~~~~~-------------~~--------~~~~~~ 55 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGA---KVAFSDINEA---AGQQLA-------------AE--------LGERSM 55 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECSCHH---HHHHHH-------------HH--------HCTTEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH---HHHHHH-------------HH--------hCCCeE
Confidence 37899999999999999999999999996 5577777532 122221 22 136678
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
++.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+....
T Consensus 56 ~~~~Dv~~-------~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~ 128 (253)
T d1hxha_ 56 FVRHDVSS-------EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE 128 (253)
T ss_dssp EECCCTTC-------HHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred EEEeecCC-------HHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 89999995 33333333 369999999997542 25688999999999999888775532
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|++||....... .
T Consensus 129 ~~G~Iv~isS~~~~~~~--------------------------------------------------------------~ 146 (253)
T d1hxha_ 129 TGGSIINMASVSSWLPI--------------------------------------------------------------E 146 (253)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred cCCceecccchhhhcCc--------------------------------------------------------------c
Confidence 23589999986543211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----c--CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----K--ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~--~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
....|+.||+..+.+.+.. . .++++..|-|+.|-.+.... ..+. ........... .....
T Consensus 147 ~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~---~~~~-~~~~~~~~~~~---------~~~~~ 213 (253)
T d1hxha_ 147 QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA---SLPK-GVSKEMVLHDP---------KLNRA 213 (253)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH---HSCT-TCCHHHHBCBT---------TTBTT
T ss_pred ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHh---hCcc-hhhHHHHHhCc---------ccccc
Confidence 2357999999888877643 2 35999999999886542110 0000 00001110000 00111
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-.+...+|+|++++.++.+...--. |+++++.+|
T Consensus 214 gr~~~pedvA~~v~fL~S~~s~~it--G~~i~VDGG 247 (253)
T d1hxha_ 214 GRAYMPERIAQLVLFLASDESSVMS--GSELHADNS 247 (253)
T ss_dssp CCEECHHHHHHHHHHHHSGGGTTCC--SCEEEESSS
T ss_pred CCCCCHHHHHHHHHHHhChhhCCCc--CcEEEECcc
Confidence 2366789999999988864333222 888998776
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.56 E-value=3.9e-14 Score=132.34 Aligned_cols=205 Identities=20% Similarity=0.220 Sum_probs=139.5
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+|=.+++||||||+|.||+.++++|+++|. ++|+++.|+.......+.+.+++ +. ...++
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l---------~~---------~g~~v 64 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAEL---------EA---------LGART 64 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHH---------HH---------TTCEE
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCccCHHHHHHHHHHH---------Hh---------ccccc
Confidence 455678999999999999999999999996 35778888754433333332111 11 13678
Q ss_pred EEEecCCCCCCCCCCchhhHHHhcc------CccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcccc
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWN------KLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCAKL 154 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~------~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~~ 154 (492)
.++.+|++ +.+..+.+++ .+|.|+|+|+..... +.+...+++|+.|+.++.+++... +.
T Consensus 65 ~~~~~Dv~-------d~~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~ 136 (259)
T d2fr1a1 65 TVAACDVT-------DRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DL 136 (259)
T ss_dssp EEEECCTT-------CHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CC
T ss_pred cccccccc-------hHHHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CC
Confidence 99999999 4444444443 489999999976432 456778899999999999988775 56
Q ss_pred eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCC
Q 037479 155 IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWP 234 (492)
Q Consensus 155 ~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (492)
.++|++||....-.. ...
T Consensus 137 ~~iv~~SS~a~~~g~--------------------------------------------------------------~~~ 154 (259)
T d2fr1a1 137 TAFVLFSSFASAFGA--------------------------------------------------------------PGL 154 (259)
T ss_dssp SEEEEEEEHHHHTCC--------------------------------------------------------------TTC
T ss_pred ceEeeecchhhccCC--------------------------------------------------------------ccc
Confidence 789999986543211 123
Q ss_pred chHHHHHHHHHHHHHHh-cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 235 NTYVFTKVMGEMFIEHL-KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 235 n~Y~~sK~~aE~~v~~~-~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
..|+.+|+..+.+..+. ..|++++.|.|+.|.++.-. +. .....+. ..-...++.++
T Consensus 155 ~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~------~~-----~~~~~~~-----------~~G~~~~~~~~ 212 (259)
T d2fr1a1 155 GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMA------EG-----PVADRFR-----------RHGVIEMPPET 212 (259)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-----------------------CT-----------TTTEECBCHHH
T ss_pred HHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccc------cc-----hHHHHHH-----------hcCCCCCCHHH
Confidence 46999999999988776 57899999999987654321 10 0000000 01123577899
Q ss_pred hhhHHHHHHHh
Q 037479 314 VVNAIVVAVVA 324 (492)
Q Consensus 314 va~~ii~~~~~ 324 (492)
+++++..++..
T Consensus 213 ~~~~l~~~l~~ 223 (259)
T d2fr1a1 213 ACRALQNALDR 223 (259)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhC
Confidence 99998888764
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.56 E-value=5.4e-14 Score=132.37 Aligned_cols=225 Identities=16% Similarity=0.158 Sum_probs=142.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++.||+.++++|++.|. +|++..|+. +++. + +.++ ...++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~------~~l~-~---------~~~~--------~~~~~~~ 55 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGA---KVAVLDKSA------ERLA-E---------LETD--------HGDNVLG 55 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHH-H---------HHHH--------HGGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHH-H---------HHHH--------cCCCeeE
Confidence 5799999999999999999999999996 558888763 2222 1 1111 1367899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc------------hhHHHHHHHhHHHHHHHHHHHHh
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD------------ERYDVALDLNTFGAKHVLNFSKK 150 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~------------~~~~~~~~~Nv~gt~~ll~~a~~ 150 (492)
+.+|+++ .+..+.++ ..+|++||+||...+. +.++..+++|+.|+..+.+.+..
T Consensus 56 ~~~Dv~~-------~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p 128 (276)
T d1bdba_ 56 IVGDVRS-------LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLP 128 (276)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred Eeccccc-------HHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHH
Confidence 9999994 43333333 3799999999964321 23788899999999998887754
Q ss_pred cc--cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 151 CA--KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 151 ~~--~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
.. +-.++|++||....-..
T Consensus 129 ~m~~~~g~iI~i~S~~~~~~~----------------------------------------------------------- 149 (276)
T d1bdba_ 129 ALVASRGNVIFTISNAGFYPN----------------------------------------------------------- 149 (276)
T ss_dssp HHHHHTCEEEEECCGGGTSTT-----------------------------------------------------------
T ss_pred HHHhcCCCceeeeechhccCC-----------------------------------------------------------
Confidence 21 22467887774322110
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeCCceecCCCCCCCccccC-cCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL----KENMSVAIVRPTIITGTYKEPFPGWAEG-IRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~----~~~~~~~ivRPs~v~g~~~~p~~gw~~~-~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. .+++++..|.|+.|-.+...+...+... ......+...+.. ..
T Consensus 150 ---~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 217 (276)
T d1bdba_ 150 ---GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKS---------VL 217 (276)
T ss_dssp ---SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTT---------TC
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHh---------cC
Confidence 12357999999888887654 4569999999999876544332211110 0000011111111 00
Q ss_pred cccceeehhhhhhHHHHHHHh-hhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVA-HAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~-~~~~~~~~~~iy~i~~~ 341 (492)
..--+...+|+|++++..+.. ...-- + |+++++.+|
T Consensus 218 PlgR~g~peeva~~v~fL~S~~~a~~i-t-G~~i~VDGG 254 (276)
T d1bdba_ 218 PIGRMPEVEEYTGAYVFFATRGDAAPA-T-GALLNYDGG 254 (276)
T ss_dssp TTSSCCCGGGGSHHHHHHHCHHHHTTC-S-SCEEEESSS
T ss_pred CCCCCcCHHHHHHHHHHHcCCcccCCe-e-CcEEEECcC
Confidence 111245678999999887642 22222 1 889999887
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.56 E-value=9.5e-14 Score=129.35 Aligned_cols=220 Identities=15% Similarity=0.135 Sum_probs=140.7
Q ss_pred cCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
++||++|||||+| -||+.++++|++.|. +|.+..|+.+.....+.+. .. ..+.
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~Ga---~V~i~~~~~~~~~~~~~~~-------------~~---------~~~~ 60 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGA---EVALSYQAERLRPEAEKLA-------------EA---------LGGA 60 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHTTC---EEEEEESSGGGHHHHHHHH-------------HH---------TTCC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC---EEEEEeCcHHHHHHHHHhh-------------hc---------cCcc
Confidence 6899999999998 699999999999996 4566666533221111111 11 2456
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccC-------c----chhHHHHHHHhHHHHHHHHHHHH
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTN-------F----DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~-------~----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
..+.+|+++ ++..+.++ .++|++||+|+... + .+.+...+++|+.++..+.+.+.
T Consensus 61 ~~~~~D~~~-------~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 133 (256)
T d1ulua_ 61 LLFRADVTQ-------DEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAE 133 (256)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred cccccccCC-------HHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHH
Confidence 789999995 43343433 47999999998632 1 13467789999999999998876
Q ss_pred hcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 150 KCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 150 ~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
... +-.++|++||.......
T Consensus 134 ~~~~~~G~Iv~isS~~~~~~~----------------------------------------------------------- 154 (256)
T d1ulua_ 134 PLLREGGGIVTLTYYASEKVV----------------------------------------------------------- 154 (256)
T ss_dssp TTEEEEEEEEEEECGGGTSBC-----------------------------------------------------------
T ss_pred HHhccCCEEEEEeehHhcCCC-----------------------------------------------------------
Confidence 542 22478999885543221
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|..+.....+. .......+.+. .|
T Consensus 155 ---~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~-------~~~~~~~~~~~----~p---- 216 (256)
T d1ulua_ 155 ---PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-------FTKMYDRVAQT----AP---- 216 (256)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------CHHHHHHHHHH----ST----
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh-------hHHHHHHHHhc----CC----
Confidence 23468999999999887755 568999999999887654432211 11111111110 00
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|++++.++.....-- + |+++.+.+|
T Consensus 217 -l~R~~~pedvA~~v~fL~S~~s~~i-t-G~~i~VDGG 251 (256)
T d1ulua_ 217 -LRRNITQEEVGNLGLFLLSPLASGI-T-GEVVYVDAG 251 (256)
T ss_dssp -TSSCCCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred -CCCCcCHHHHHHHHHHHhCchhCCc-c-CCeEEECcC
Confidence 1124567999999998887433322 2 788888877
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.55 E-value=3e-14 Score=132.61 Aligned_cols=226 Identities=12% Similarity=0.062 Sum_probs=142.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|.+|||||++-||+.++++|++.|. +|++..|++.. .+.+.+++ ++ ...++.++.
T Consensus 1 KKValITGas~GIG~aia~~la~~Ga---~V~~~~r~~~~---l~~~~~~i---------~~---------~g~~~~~~~ 56 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKDGF---AVAIADYNDAT---AKAVASEI---------NQ---------AGGHAVAVK 56 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HH---------TTCCEEEEE
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEEEE
Confidence 35679999999999999999999996 55888886422 22222111 11 125788999
Q ss_pred cCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh-c---cc
Q 037479 92 GDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK-C---AK 153 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-~---~~ 153 (492)
+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+.++.+.+.. + ++
T Consensus 57 ~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~ 129 (255)
T d1gega_ 57 VDVSD-------RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH 129 (255)
T ss_dssp CCTTS-------HHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred eeCCC-------HHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcc
Confidence 99994 44443333 479999999997532 256889999999999999887643 2 13
Q ss_pred ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 154 LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 154 ~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
-.++|.+||....... ..
T Consensus 130 ~g~Iv~isS~~~~~~~--------------------------------------------------------------~~ 147 (255)
T d1gega_ 130 GGKIINACSQAGHVGN--------------------------------------------------------------PE 147 (255)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------------TT
T ss_pred ccccccccchhhcccC--------------------------------------------------------------cc
Confidence 3568999886533211 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccc-cCc-CchHHHHHhccCceeeEEecCCCccc
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWA-EGI-RTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~-~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
...|+.||+..+.+.+.. ..|+++..|.|+.|-.+......... +.. .........+.+ .....
T Consensus 148 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~pl~ 218 (255)
T d1gega_ 148 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK---------RITLG 218 (255)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHT---------TCTTC
T ss_pred cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHh---------cCCCC
Confidence 457999999988887754 45899999999987543211000000 000 000000111111 00111
Q ss_pred ceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 307 DVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
-+...+|+|+++..++.....-- + |+++.+.+|
T Consensus 219 R~~~peevA~~v~fL~S~~a~~i-t-G~~i~vDGG 251 (255)
T d1gega_ 219 RLSEPEDVAACVSYLASPDSDYM-T-GQSLLIDGG 251 (255)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESSS
T ss_pred CCcCHHHHHHHHHHHhCchhCCc-c-CcEEEecCC
Confidence 25668999999998886433222 2 888988877
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=2.8e-14 Score=132.73 Aligned_cols=229 Identities=16% Similarity=0.217 Sum_probs=146.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+||++|||||++-||+.++++|++.|. +|++..|+... .+...+++ .++.+ ..++.++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~---~~~~~~~l---------~~~~~-------~~~~~~~ 59 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGA---KVALVDWNLEA---GVQCKAAL---------HEQFE-------PQKTLFI 59 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------TTTSC-------GGGEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------HHhcC-------CCcEEEE
Confidence 689999999999999999999999996 56888886432 11111111 11111 2578999
Q ss_pred ecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcc---c---ceeE
Q 037479 91 PGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCA---K---LIVL 157 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---~---~~~~ 157 (492)
.+|+++ ++..+.++ .++|++||+|+... .++++..+++|+.++.++.+++.+.. + -.++
T Consensus 60 ~~Dv~~-------~~~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~I 131 (254)
T d2gdza1 60 QCDVAD-------QQQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGII 131 (254)
T ss_dssp ECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEE
T ss_pred EeecCC-------HHHHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEE
Confidence 999994 44343433 36999999999754 45688899999999888877765421 1 2469
Q ss_pred EEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchH
Q 037479 158 VHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTY 237 (492)
Q Consensus 158 V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y 237 (492)
|.+||....-.. .....|
T Consensus 132 v~isS~~~~~~~--------------------------------------------------------------~~~~~Y 149 (254)
T d2gdza1 132 INMSSLAGLMPV--------------------------------------------------------------AQQPVY 149 (254)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------------TTCHHH
T ss_pred EeeccHhhccCC--------------------------------------------------------------CCccch
Confidence 999986533111 123579
Q ss_pred HHHHHHHHHHHHH------h-cCCCcEEEEeCCceecCCCCCCCc---cccCcCchHHHHHhccCceeeEEecCCCcccc
Q 037479 238 VFTKVMGEMFIEH------L-KENMSVAIVRPTIITGTYKEPFPG---WAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVD 307 (492)
Q Consensus 238 ~~sK~~aE~~v~~------~-~~~~~~~ivRPs~v~g~~~~p~~g---w~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d 307 (492)
+.||+..+.+.+. + ..|+++..|.|+.|-.+..+.... .-........+......| -
T Consensus 150 ~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------------r 216 (254)
T d2gdza1 150 CASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY-------------G 216 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH-------------C
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCC-------------C
Confidence 9999988877642 2 568999999999886442211100 000000000111111001 2
Q ss_pred eeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCCCCCcccHHH
Q 037479 308 VIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSSLRNPLIYTN 350 (492)
Q Consensus 308 ~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~~~~~~t~~e 350 (492)
+...+|+|++++.++.+.. .. |++..+.+| ..+.|+|
T Consensus 217 ~~~pedvA~~v~fL~s~~~-it---G~~i~VdGG--~~~~~~~ 253 (254)
T d2gdza1 217 ILDPPLIANGLITLIEDDA-LN---GAIMKITTS--KGIHFQD 253 (254)
T ss_dssp CBCHHHHHHHHHHHHHCTT-CS---SCEEEEETT--TEEEECC
T ss_pred CcCHHHHHHHHHHHHcCCC-CC---CCEEEECCC--Ceeeccc
Confidence 3457899999999887432 22 889999888 5565543
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.55 E-value=5.9e-14 Score=131.90 Aligned_cols=232 Identities=15% Similarity=0.141 Sum_probs=142.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++-||+.++++|++.|. +|++..|++.. .+.+.+++.+.. ....++..
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~l~~r~~~~---l~~~~~~l~~~~---------------~~~~~~~~ 61 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGA---NVTITGRSSER---LEETRQIILKSG---------------VSEKQVNS 61 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHHHTTT---------------CCGGGEEE
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHHHhcC---------------CCCCceEE
Confidence 6899999999999999999999999996 56888886432 222222221110 01257899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc--------c---hhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF--------D---ERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~--------~---~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+.+|+++ ++..+.++ .++|++||+||.... + +.++..+++|+.|+..+.+++...
T Consensus 62 ~~~Dvs~-------~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~ 134 (272)
T d1xkqa_ 62 VVADVTT-------EDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 134 (272)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccc
Confidence 9999994 44343433 369999999997532 1 247888999999999998887653
Q ss_pred c--cceeEEEeee-ceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 152 A--KLIVLVHVST-AFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 152 ~--~~~~~V~vST-~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
. +-..+|.++| .......
T Consensus 135 m~~~~g~iI~~~Ss~a~~~~~----------------------------------------------------------- 155 (272)
T d1xkqa_ 135 LVASKGEIVNVSSIVAGPQAQ----------------------------------------------------------- 155 (272)
T ss_dssp HHHHTCEEEEECCGGGSSSCC-----------------------------------------------------------
T ss_pred ccccCCccccccchhccccCC-----------------------------------------------------------
Confidence 1 2234555554 2211110
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCC
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVK 303 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~ 303 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+........-............... ..
T Consensus 156 ---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~----~~----- 223 (272)
T d1xkqa_ 156 ---PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKE----CI----- 223 (272)
T ss_dssp ---CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT----TC-----
T ss_pred ---CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhc----CC-----
Confidence 12357999999988887654 56899999999988654321110000000000111111111 00
Q ss_pred cccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 304 GIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 304 ~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...-+...+|+|++++.++.......-+ |+++.+.+|
T Consensus 224 PlgR~g~pediA~~v~fL~S~~as~~iT-G~~i~vDGG 260 (272)
T d1xkqa_ 224 PIGAAGKPEHIANIILFLADRNLSFYIL-GQSIVADGG 260 (272)
T ss_dssp TTSSCBCHHHHHHHHHHHHCHHHHTTCC-SCEEEESTT
T ss_pred CCCCCcCHHHHHHHHHHHhCcchhCCcc-CeEEEeCcC
Confidence 0112556799999999888533221111 889999887
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.54 E-value=8.5e-14 Score=130.89 Aligned_cols=231 Identities=14% Similarity=0.103 Sum_probs=144.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.++++|++.|. +|++..|++.. .+.+.+++ .+... ...++..
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~~~---l~~~~~~i---------~~~~~------~~~~~~~ 60 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGA---QVTITGRNEDR---LEETKQQI---------LKAGV------PAEKINA 60 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HHTTC------CGGGEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------HHcCC------CCcceEE
Confidence 5899999999999999999999999996 55888885422 22222222 11110 1257899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc---------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF---------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+....
T Consensus 61 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~ 133 (274)
T d1xhla_ 61 VVADVTE-------ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI 133 (274)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccc
Confidence 9999994 44343433 368999999985421 14578899999999999988775531
Q ss_pred --cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 153 --KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 153 --~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
+-.+++.+||.......
T Consensus 134 ~~~~g~ii~~ss~~~~~~~------------------------------------------------------------- 152 (274)
T d1xhla_ 134 KTKGEIVNVSSIVAGPQAH------------------------------------------------------------- 152 (274)
T ss_dssp HTTCEEEEECCGGGSSSCC-------------------------------------------------------------
T ss_pred ccccccccchhhhhccccC-------------------------------------------------------------
Confidence 33467777764322111
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+........-.........+...... .| .
T Consensus 153 -~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~----iP-----l 222 (274)
T d1xhla_ 153 -SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC----IP-----V 222 (274)
T ss_dssp -TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT----CT-----T
T ss_pred -CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcC----CC-----C
Confidence 12347999999988887654 468999999999986543211000000000001111111110 01 1
Q ss_pred cceeehhhhhhHHHHHHHhh-hcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAH-AKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~-~~~~~~~~~iy~i~~~ 341 (492)
.-+...+|+|++++.++..+ ..-- + |+++.+.+|
T Consensus 223 gR~g~pediA~~v~fL~S~d~s~~i-t-G~~i~vDGG 257 (274)
T d1xhla_ 223 GHCGKPEEIANIIVFLADRNLSSYI-I-GQSIVADGG 257 (274)
T ss_dssp SSCBCHHHHHHHHHHHHCHHHHTTC-C-SCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHcCCccccCc-c-CcEEEeCcC
Confidence 12456899999999888532 2222 1 889999887
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=3.4e-14 Score=131.34 Aligned_cols=224 Identities=13% Similarity=0.086 Sum_probs=145.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||+|-||+.++++|++.|. +|++..|++. +++ ++.+ ..++..
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~---~Vi~~~r~~~------~l~-~~~~-------------------~~~~~~ 54 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGA---KVIATDINES------KLQ-ELEK-------------------YPGIQT 54 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHG-GGGG-------------------STTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCHH------HHH-HHHh-------------------ccCCce
Confidence 7899999999999999999999999996 5588888632 222 1110 145677
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---cceeEEE
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---KLIVLVH 159 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~~~V~ 159 (492)
...|+...+ ..+.....+.++|++||+||.... .+.++..+++|+.|+..+.+.+.... +-.++|.
T Consensus 55 ~~~d~~~~~----~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~ 130 (245)
T d2ag5a1 55 RVLDVTKKK----QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIIN 130 (245)
T ss_dssp EECCTTCHH----HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred eeeeccccc----cccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeee
Confidence 888887422 111122333589999999997653 25688999999999999988776421 3358899
Q ss_pred eeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 160 VSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 160 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
+||.... .. . ......|+.
T Consensus 131 isS~~~~--~~------~-----------------------------------------------------~~~~~~Y~~ 149 (245)
T d2ag5a1 131 MSSVASS--VK------G-----------------------------------------------------VVNRCVYST 149 (245)
T ss_dssp ECCSBTT--TB------C-----------------------------------------------------CTTBHHHHH
T ss_pred eechhhc--cC------C-----------------------------------------------------ccchhHHHH
Confidence 9874321 00 0 023468999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhh
Q 037479 240 TKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 240 sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddv 314 (492)
+|+..+.+++.. ..|+++..|.|+.|-.+..... .............+.. .....-+...+|+
T Consensus 150 sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~~~~~---------~~pl~R~~~pedv 217 (245)
T d2ag5a1 150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQER---IQARGNPEEARNDFLK---------RQKTGRFATAEEI 217 (245)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHH---HHHSSSHHHHHHHHHH---------TCTTSSCEEHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhh---hhhhhhhHHHHHHHHh---------cCCCCCCcCHHHH
Confidence 999999888755 5689999999999876432100 0000111111111111 0111135678999
Q ss_pred hhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 315 VNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 315 a~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
|+++..++.+....-. |+++.+.+|
T Consensus 218 a~~v~fL~s~~s~~iT--G~~i~VDGG 242 (245)
T d2ag5a1 218 AMLCVYLASDESAYVT--GNPVIIDGG 242 (245)
T ss_dssp HHHHHHHHSGGGTTCC--SCEEEECTT
T ss_pred HHHHHHHhChhhCCCc--CceEEeCCC
Confidence 9999998875443222 888988887
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.53 E-value=3.1e-14 Score=132.68 Aligned_cols=226 Identities=15% Similarity=0.095 Sum_probs=145.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
||.+|||||++-||+.++++|+++|. +|++..|++.. .+.+.+++ ++ ...++..+.
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~---l~~~~~~l---------~~---------~g~~~~~~~ 57 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGL---RVFVCARGEEG---LRTTLKEL---------RE---------AGVEADGRT 57 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HH---------TTCCEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEEEE
Confidence 78999999999999999999999996 55788885322 22222111 11 125788999
Q ss_pred cCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhc-----c
Q 037479 92 GDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKC-----A 152 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~-----~ 152 (492)
+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 58 ~Dvs~-------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~ 130 (257)
T d2rhca1 58 CDVRS-------VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER 130 (257)
T ss_dssp CCTTC-------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH
T ss_pred eecCC-------HHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc
Confidence 99995 44343333 369999999997543 2568899999999999999987642 1
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|.+||....... .
T Consensus 131 ~~g~Ii~i~S~~~~~~~--------------------------------------------------------------~ 148 (257)
T d2rhca1 131 GTGRIVNIASTGGKQGV--------------------------------------------------------------V 148 (257)
T ss_dssp TEEEEEEECCGGGTSCC--------------------------------------------------------------T
T ss_pred CCccccccccccccccc--------------------------------------------------------------c
Confidence 33578888885443211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCC-ccccCc-CchHHHHHhccCceeeEEecCCCcc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFP-GWAEGI-RTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~-gw~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+... .+.+.. .........+... ...
T Consensus 149 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~---------~Pl 219 (257)
T d2rhca1 149 HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR---------VPI 219 (257)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTT---------STT
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhc---------CCC
Confidence 2457999999988888754 45799999999988643211000 000000 0011111111110 011
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.-+...+|+|++++.++......- + |+++.+.+|
T Consensus 220 gR~~~pedia~~v~fL~S~~s~~i-t-G~~i~vDGG 253 (257)
T d2rhca1 220 GRYVQPSEVAEMVAYLIGPGAAAV-T-AQALNVCGG 253 (257)
T ss_dssp SSCBCHHHHHHHHHHHTSGGGTTC-C-SCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCchhcCC-c-CceEEECcC
Confidence 125668999999998886433322 2 888998887
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=2.3e-13 Score=126.60 Aligned_cols=209 Identities=13% Similarity=0.161 Sum_probs=135.4
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.++||++|||||++-||++++++|++.|. +|++..|+.. ..+.+.++ +++..+ ..++.
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~---~Vv~~~r~~~---~l~~~~~~---------l~~~~~-------~~~~~ 64 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGL---KVVGCARTVG---NIEELAAE---------CKSAGY-------PGTLI 64 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH---HHHHHHHH---------HHHTTC-------SSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH---HHHHHHHH---------HHhcCC-------CceEE
Confidence 47999999999999999999999999996 5578877532 12222211 222111 25788
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHh----
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKK---- 150 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~---- 150 (492)
++.+|+++ ++..+.++ .++|++||+|+.... .+.++..+++|+.|+..+.+.+.+
T Consensus 65 ~~~~Dls~-------~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~ 137 (257)
T d1xg5a_ 65 PYRCDLSN-------EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE 137 (257)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEccCCC-------HHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 99999994 44333333 469999999997643 256889999999999888777643
Q ss_pred cc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccc
Q 037479 151 CA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAK 229 (492)
Q Consensus 151 ~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (492)
.+ +-.++|.+||........ +
T Consensus 138 ~~~~~g~Ii~isS~~~~~~~p-------~--------------------------------------------------- 159 (257)
T d1xg5a_ 138 RNVDDGHIININSMSGHRVLP-------L--------------------------------------------------- 159 (257)
T ss_dssp TTCCSCEEEEECCGGGTSCCS-------C---------------------------------------------------
T ss_pred hccCCCceEEEechHhcCCCC-------C---------------------------------------------------
Confidence 21 135899999865432110 0
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 230 IYGWPNTYVFTKVMGEMFIEHL-------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 230 ~~~~~n~Y~~sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.+|+..+.+.+.+ ..++++..|-|+.+-.+...... + ............
T Consensus 160 --~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~---~--~~~~~~~~~~~~---------- 222 (257)
T d1xg5a_ 160 --SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH---D--KDPEKAAATYEQ---------- 222 (257)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHT---T--TCHHHHHHHHC-----------
T ss_pred --cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcC---h--hhHHHHHhcCCC----------
Confidence 11245999999988887533 35899999999877643321111 0 011111111111
Q ss_pred CcccceeehhhhhhHHHHHHHh
Q 037479 303 KGIVDVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~ 324 (492)
.-+...+|+|++++.++..
T Consensus 223 ---~r~~~pedvA~~v~fL~s~ 241 (257)
T d1xg5a_ 223 ---MKCLKPEDVAEAVIYVLST 241 (257)
T ss_dssp -----CBCHHHHHHHHHHHHHS
T ss_pred ---CCCcCHHHHHHHHHHHhCC
Confidence 1246689999999988864
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.51 E-value=2e-13 Score=125.57 Aligned_cols=195 Identities=15% Similarity=0.155 Sum_probs=131.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCC----eEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVK----KLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~----~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+.||||||++-||+.++++|++.|.++. .|++..|+... .+.+.+++ ++ ...++.
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~---l~~~~~~~---------~~---------~g~~~~ 60 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD---LEKISLEC---------RA---------EGALTD 60 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH---HHHHHHHH---------HT---------TTCEEE
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHH---HHHHHHHH---------Hh---------cCCcEE
Confidence 4589999999999999999999997521 25666665322 22222111 11 125788
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-- 152 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (492)
++.+|+++ ++..+.++ .++|++||+||.... .+.++..+++|+.|+..+.+.+....
T Consensus 61 ~~~~Dvt~-------~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 133 (240)
T d2bd0a1 61 TITADISD-------MADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMER 133 (240)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHh
Confidence 89999995 44333333 369999999997643 25688999999999999888775532
Q ss_pred -cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccC
Q 037479 153 -KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIY 231 (492)
Q Consensus 153 -~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (492)
+-.++|++||.......
T Consensus 134 ~~~G~Ii~isS~~~~~~~-------------------------------------------------------------- 151 (240)
T d2bd0a1 134 QHSGHIFFITSVAATKAF-------------------------------------------------------------- 151 (240)
T ss_dssp HTCEEEEEECCGGGTSCC--------------------------------------------------------------
T ss_pred cCCCceEEEechhhcCCC--------------------------------------------------------------
Confidence 23579999986543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCccc
Q 037479 232 GWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIV 306 (492)
Q Consensus 232 ~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 306 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+..+. ....
T Consensus 152 ~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~---------------------------~~~~ 204 (240)
T d2bd0a1 152 RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD---------------------------EMQA 204 (240)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS---------------------------TTGG
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH---------------------------hhHh
Confidence 12458999998887777654 458999999999986554322111 0011
Q ss_pred ceeehhhhhhHHHHHHHh
Q 037479 307 DVIPADMVVNAIVVAVVA 324 (492)
Q Consensus 307 d~v~vddva~~ii~~~~~ 324 (492)
.+...+|+|++++.++.+
T Consensus 205 ~~~~PedvA~~v~~l~s~ 222 (240)
T d2bd0a1 205 LMMMPEDIAAPVVQAYLQ 222 (240)
T ss_dssp GSBCHHHHHHHHHHHHTS
T ss_pred cCCCHHHHHHHHHHHHcC
Confidence 234568999999998864
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.50 E-value=1.7e-13 Score=127.21 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=78.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
|+.|+|||||||+-||..++++|++.|..+ +|++..|+.... +.+ ++. ...++.+
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~-~Vi~~~R~~~~~---~~l-------------~~~--------~~~~~~~ 55 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKA---TEL-------------KSI--------KDSRVHV 55 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGC---HHH-------------HTC--------CCTTEEE
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCC-EEEEEeCCHHHH---HHH-------------HHh--------hCCceEE
Confidence 567999999999999999999999999754 677777765332 111 111 1367899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------c--CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHH
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------N--KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSK 149 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~--~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (492)
+.+|+++ .+..+.++ . .+|++||+||.... .+.++..+++|+.|+.++.+.+.
T Consensus 56 ~~~Dvs~-------~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 125 (250)
T d1yo6a1 56 LPLTVTC-------DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL 125 (250)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred EEEecCC-------HHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHH
Confidence 9999994 33333322 1 38999999997432 14577899999999998877764
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.50 E-value=7.2e-14 Score=132.99 Aligned_cols=212 Identities=17% Similarity=0.201 Sum_probs=136.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCc------CHHHHHHHHhhcChhhHHHHHhcCCchhhhc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAK------SATVRFHNEIIGKDLFRVLKEKNGTHLNALI 83 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~------~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~ 83 (492)
++||++|||||++.||+.++++|++.|. +|++..|+.... ...+.+. ++.
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~Ga---~Vvi~d~~~~~~~~~~~~~~~~~~~-------------~~~-------- 60 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERGA---LVVVNDLGGDFKGVGKGSSAADKVV-------------EEI-------- 60 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSCBCCSHHHHHHH-------------HHH--------
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCchhhhhhhhHHHHHHHH-------------HHH--------
Confidence 5799999999999999999999999996 457777754321 1122211 111
Q ss_pred cCceEEEecCCCCCCCCCCchhhHHHh---ccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 84 SEKITLVPGDITREDLGVKDSNLREEM---WNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 84 ~~~v~~v~gDl~~~~lgl~~~~~~~~~---~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
..+...+.+|+++.+- .+...+.+ +.++|++||+||.... .+.++..+++|+.|+..+.+.+....
T Consensus 61 ~~~~~~~~~d~~~~~~---~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 137 (302)
T d1gz6a_ 61 RRRGGKAVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMK 137 (302)
T ss_dssp HHTTCEEEEECCCGGG---HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccccccccchHHH---HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHH
Confidence 1223345667774321 11222222 2479999999997643 25688999999999999988765421
Q ss_pred --cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 153 --KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 153 --~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
+-.++|++||.......
T Consensus 138 ~~~~G~IV~isS~~~~~~~------------------------------------------------------------- 156 (302)
T d1gz6a_ 138 KQNYGRIIMTASASGIYGN------------------------------------------------------------- 156 (302)
T ss_dssp HHTCEEEEEECCHHHHHCC-------------------------------------------------------------
T ss_pred hCCCcEEEEeCChhhcCCC-------------------------------------------------------------
Confidence 33589999986533111
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.||+..+.+.+.. ..|+++..|-|+.+-.......+ ..+
T Consensus 157 -~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~---------~~~------------------- 207 (302)
T d1gz6a_ 157 -FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP---------EDL------------------- 207 (302)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC---------HHH-------------------
T ss_pred -CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc---------Hhh-------------------
Confidence 12358999999988887654 46899999999876332221110 111
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+..+|+|++++.++.... .. + |+++.+.+|
T Consensus 208 ~~~~~PedvA~~v~fL~S~~a-~i-t-G~~i~vdGG 240 (302)
T d1gz6a_ 208 VEALKPEYVAPLVLWLCHESC-EE-N-GGLFEVGAG 240 (302)
T ss_dssp HHHSCGGGTHHHHHHHTSTTC-CC-C-SCEEEEETT
T ss_pred HhcCCHHHHHHHHHHHcCCCc-CC-C-CcEEEeCCC
Confidence 122346899999988875322 22 2 777777665
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.49 E-value=1e-12 Score=123.31 Aligned_cols=233 Identities=15% Similarity=0.099 Sum_probs=145.6
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.-++||++|||||||-||+.++++|++.|. +|++..|+... ..+.+.+ .+++. ..++
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga---~Vvi~~~~~~~--~~~~~~~---------~~~~~---------g~~~ 70 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGC---KVIVNYANSTE--SAEEVVA---------AIKKN---------GSDA 70 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHH---------HHHHT---------TCCE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCchH--HHHHHHH---------HHHhh---------CCce
Confidence 347899999999999999999999999996 44776665322 1222221 11111 2568
Q ss_pred EEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-
Q 037479 88 TLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA- 152 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~- 152 (492)
.++.+|+++ ++....++ .++|+++|+|+.... .+.++..+++|+.|+..+++++....
T Consensus 71 ~~~~~D~~~-------~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~ 143 (272)
T d1g0oa_ 71 ACVKANVGV-------VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE 143 (272)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC
T ss_pred eeEeCCCCC-------HHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccc
Confidence 899999994 33333333 368999999997643 25678889999999999999887642
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
.-.+.+.++|....... ..
T Consensus 144 ~~g~~i~i~s~~~~~~~-------------------------------------------------------------~~ 162 (272)
T d1g0oa_ 144 IGGRLILMGSITGQAKA-------------------------------------------------------------VP 162 (272)
T ss_dssp TTCEEEEECCGGGTCSS-------------------------------------------------------------CS
T ss_pred ccccccccccccccccc-------------------------------------------------------------cc
Confidence 23466777664322110 02
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCC-CccccCc--CchHHHHHhccCceeeEEecCCCc
Q 037479 233 WPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPF-PGWAEGI--RTIDSLAVGYGKGRLTCFLGDVKG 304 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~-~gw~~~~--~~~~~~~~~~~~g~~~~~~~~~~~ 304 (492)
....|+.||+.-+.+.+.. ..|+++..|.|+.|-.+..... ..+.... ............. .. .
T Consensus 163 ~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----P 234 (272)
T d1g0oa_ 163 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ---WS-----P 234 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH---SC-----T
T ss_pred chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHc---cC-----C
Confidence 3457999999988888654 4689999999999865421100 0000000 0001110000000 00 0
Q ss_pred ccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 305 IVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 305 ~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.--+...+|||++++.++......- + |.+..+.+|
T Consensus 235 lgR~~~peevA~~v~fL~s~~s~~i-t-G~~i~vDGG 269 (272)
T d1g0oa_ 235 LRRVGLPIDIARVVCFLASNDGGWV-T-GKVIGIDGG 269 (272)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCc-c-CceEeECCC
Confidence 1135678999999999886443222 2 788888876
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.48 E-value=2.6e-13 Score=126.56 Aligned_cols=227 Identities=15% Similarity=0.162 Sum_probs=142.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+||||||||-||+++++.|++.|++ |++..|+... ..+++.+++ ++ ...++..
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~---Vvi~~~~~~~--~~~~~~~~~---------~~---------~g~~~~~ 60 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGAS---VVVNYGSSSK--AAEEVVAEL---------KK---------LGAQGVA 60 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEcCCChH--HHHHHHHHH---------HH---------cCCCceE
Confidence 57999999999999999999999999974 4666554322 122222111 11 1357889
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-cc
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-KL 154 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~ 154 (492)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.+...+++.+.... .-
T Consensus 61 ~~~D~~~-------~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~ 133 (259)
T d1ja9a_ 61 IQADISK-------PSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG 133 (259)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE
T ss_pred ecCCCCC-------HHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC
Confidence 9999994 33333333 369999999997643 25678899999999999999886632 22
Q ss_pred eeEEEeeec-eeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCC
Q 037479 155 IVLVHVSTA-FVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGW 233 (492)
Q Consensus 155 ~~~V~vST~-~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (492)
.+.+.++|. ...... ..
T Consensus 134 g~~iii~s~~~~~~~~--------------------------------------------------------------~~ 151 (259)
T d1ja9a_ 134 GRIILTSSIAAVMTGI--------------------------------------------------------------PN 151 (259)
T ss_dssp EEEEEECCGGGTCCSC--------------------------------------------------------------CS
T ss_pred CcccccccccccccCC--------------------------------------------------------------CC
Confidence 345555543 222110 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCC------CCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 234 PNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYK------EPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 234 ~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~------~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
...|+.||+..+.+.+.. ..++++..|.|+.|-.+.. .+...+. . .....+...+.. .
T Consensus 152 ~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~---------~ 220 (259)
T d1ja9a_ 152 HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYK-G-MPQEKIDEGLAN---------M 220 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCT-T-CCHHHHHHHHHH---------T
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcc-c-CCHHHHHHHHHh---------C
Confidence 357999998888877654 4589999999999864321 0000000 0 111111111111 0
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....-+...+|||++++.++.+....-. |.+..+.+|
T Consensus 221 ~pl~R~g~p~eVa~~v~fL~S~~a~~it--G~~i~vDGG 257 (259)
T d1ja9a_ 221 NPLKRIGYPADIGRAVSALCQEESEWIN--GQVIKLTGG 257 (259)
T ss_dssp STTSSCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhcCCc--CceEEeCCC
Confidence 1112356789999999998875443222 788888776
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.1e-13 Score=127.40 Aligned_cols=166 Identities=13% Similarity=0.110 Sum_probs=118.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+++||||++-||+.++++|++.|. +|++..|++.. .+.+.+++ .. ...++..
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~---~V~l~~r~~~~---l~~~~~~~---------~~---------~~~~~~~ 60 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKS---KLVLWDINKHG---LEETAAKC---------KG---------LGAKVHT 60 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HH---------TTCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 5799999999999999999999999995 56888886432 22222111 11 1357899
Q ss_pred EecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHHhcc---
Q 037479 90 VPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSKKCA--- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (492)
+.+|+++ .+..+.++ .++|++||+||..... +.++..+++|+.|+.++.+.+-...
T Consensus 61 ~~~Dvs~-------~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~ 133 (244)
T d1yb1a_ 61 FVVDCSN-------REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN 133 (244)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc
Confidence 9999995 44343333 3699999999986432 4577899999999999888664421
Q ss_pred cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCC
Q 037479 153 KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYG 232 (492)
Q Consensus 153 ~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (492)
+-.++|.+||........
T Consensus 134 ~~G~Iv~isS~~~~~~~~-------------------------------------------------------------- 151 (244)
T d1yb1a_ 134 NHGHIVTVASAAGHVSVP-------------------------------------------------------------- 151 (244)
T ss_dssp TCEEEEEECCCC-CCCHH--------------------------------------------------------------
T ss_pred CCceEEEeecchhcCCCC--------------------------------------------------------------
Confidence 345799999965442211
Q ss_pred CCchHHHHHHHHHHHHHHh--------cCCCcEEEEeCCceecC
Q 037479 233 WPNTYVFTKVMGEMFIEHL--------KENMSVAIVRPTIITGT 268 (492)
Q Consensus 233 ~~n~Y~~sK~~aE~~v~~~--------~~~~~~~ivRPs~v~g~ 268 (492)
....|+.||+..+.+.+.. ..|+.+..+.|+.|-.+
T Consensus 152 ~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~ 195 (244)
T d1yb1a_ 152 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 195 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence 1247999999877776644 14799999999987554
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.48 E-value=5.6e-13 Score=122.84 Aligned_cols=217 Identities=15% Similarity=0.157 Sum_probs=140.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
+.||||||++-||+.++++|++.|.+ |++..++... ..+.+.++ +++ ...++.++.+
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~---V~i~~~~~~~--~~~~~~~~---------~~~---------~g~~~~~~~~ 58 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCK---VLVNYARSAK--AAEEVSKQ---------IEA---------YGGQAITFGG 58 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHH---------HHH---------HTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHH---------HHH---------cCCcEEEEeC
Confidence 47999999999999999999999964 4555443211 12222211 111 1367889999
Q ss_pred CCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---cce
Q 037479 93 DITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---KLI 155 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~ 155 (492)
|+++ ++..+.++ .++|++||+|+.... .+.++..+++|+.|+..+.+.+.... +-.
T Consensus 59 Dv~~-------~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G 131 (244)
T d1edoa_ 59 DVSK-------EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG 131 (244)
T ss_dssp CTTS-------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCC-------HHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCc
Confidence 9994 44343333 379999999997643 25688999999999999988775531 345
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
++|++||....-.. ....
T Consensus 132 ~IVnisS~~~~~~~--------------------------------------------------------------~~~~ 149 (244)
T d1edoa_ 132 RIINIASVVGLIGN--------------------------------------------------------------IGQA 149 (244)
T ss_dssp EEEEECCTHHHHCC--------------------------------------------------------------TTCH
T ss_pred EEEEEcChhhcCCC--------------------------------------------------------------CCCH
Confidence 89999996543211 1245
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceee
Q 037479 236 TYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIP 310 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~ 310 (492)
.|+.||+..+.+.+.. ..|+++..|.|+.|-.+..+..+ ......+.. .....-+..
T Consensus 150 ~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~---------~~~~~~~~~---------~~pl~R~~~ 211 (244)
T d1edoa_ 150 NYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG---------EDMEKKILG---------TIPLGRTGQ 211 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---------HHHHHHHHT---------SCTTCSCBC
T ss_pred HHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhh---------HHHHHHHHh---------cCCCCCCcC
Confidence 8999999998887755 46899999999988644321111 111111111 001112556
Q ss_pred hhhhhhHHHHHHH-hhhcCCCCCCcEEEecCC
Q 037479 311 ADMVVNAIVVAVV-AHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 311 vddva~~ii~~~~-~~~~~~~~~~~iy~i~~~ 341 (492)
.+|+|+++..++. ....-- + |+++.+.+|
T Consensus 212 p~dvA~~v~fLa~S~~a~~i-t-G~~i~vdGG 241 (244)
T d1edoa_ 212 PENVAGLVEFLALSPAASYI-T-GQAFTIDGG 241 (244)
T ss_dssp HHHHHHHHHHHHHCSGGGGC-C-SCEEEESTT
T ss_pred HHHHHHHHHHHHCCchhcCC-c-CCeEEeCCC
Confidence 8999999988753 222211 1 788888876
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=5.1e-13 Score=126.13 Aligned_cols=171 Identities=13% Similarity=0.124 Sum_probs=118.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|.|||||||+.||++++++|++.|.+|..|+...|.... .+++.+.. ++.. ....++..+.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~---~~~l~~~~----------~~~~-----~~~~~~~~~~ 63 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKT---QGRLWEAA----------RALA-----CPPGSLETLQ 63 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGG---THHHHHHH----------HHTT-----CCTTSEEEEE
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhh---hHHHHHHH----------HHHh-----ccCCceEEEe
Confidence 5778999999999999999999999877555555554332 22322110 0000 0136789999
Q ss_pred cCCCCCCCCCCchhhHHHhc-----cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc---ccee
Q 037479 92 GDITREDLGVKDSNLREEMW-----NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA---KLIV 156 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~-----~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~~ 156 (492)
+|+++ .+..+.++ ..+|+++|+|+.... .+.++..+++|+.|+.++.+++.... +-.+
T Consensus 64 ~Dv~~-------~~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~ 136 (285)
T d1jtva_ 64 LDVRD-------SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGR 136 (285)
T ss_dssp CCTTC-------HHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccccc-------hHhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCc
Confidence 99994 44443443 269999999997643 25678899999999999888764421 3458
Q ss_pred EEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCch
Q 037479 157 LVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNT 236 (492)
Q Consensus 157 ~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 236 (492)
+|++||....... .....
T Consensus 137 Iv~isS~~g~~~~--------------------------------------------------------------~~~~~ 154 (285)
T d1jtva_ 137 VLVTGSVGGLMGL--------------------------------------------------------------PFNDV 154 (285)
T ss_dssp EEEEEEGGGTSCC--------------------------------------------------------------TTCHH
T ss_pred eEEEechhhcCCC--------------------------------------------------------------CCchH
Confidence 9999986433211 23457
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCC
Q 037479 237 YVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTY 269 (492)
Q Consensus 237 Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~ 269 (492)
|+.||+..+.+.+.. ..|+++..|.|+.|-.+.
T Consensus 155 Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~ 192 (285)
T d1jtva_ 155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred HHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChH
Confidence 999999888877654 458999999999886543
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.47 E-value=4.1e-13 Score=125.18 Aligned_cols=168 Identities=15% Similarity=0.118 Sum_probs=119.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHh---hCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 10 LENKTILVTGATGFLAKIFVEKILR---VQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~---~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
++||.++|||||+.||+.++++|.+ +|. +|++..|+... .+.+.+ .|..+.+ ..+
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~---~Vv~~~r~~~~---l~~~~~---------~l~~~~~-------~~~ 61 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS---VMLVSARSESM---LRQLKE---------ELGAQQP-------DLK 61 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC---EEEEEESCHHH---HHHHHH---------HHHHHCT-------TSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhcccCCC---EEEEEECCHHH---HHHHHH---------HHHhhcC-------Cce
Confidence 6799999999999999999999976 564 66888886432 222221 2222222 257
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhc-----------cCccEEEEcccccCc------c----hhHHHHHHHhHHHHHHHH
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMW-----------NKLDVVINLAATTNF------D----ERYDVALDLNTFGAKHVL 145 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~-----------~~vd~Vih~Aa~~~~------~----~~~~~~~~~Nv~gt~~ll 145 (492)
+.++.+|+++ ++..+.++ ..+|+++|+||.... . +.++..+++|+.|+..+.
T Consensus 62 ~~~~~~Dvs~-------~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~ 134 (259)
T d1oaaa_ 62 VVLAAADLGT-------EAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLT 134 (259)
T ss_dssp EEEEECCTTS-------HHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHH
T ss_pred EEEEEccCCC-------HHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHH
Confidence 8999999994 44443443 147899999986421 1 457889999999999999
Q ss_pred HHHHhccc-----ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Q 037479 146 NFSKKCAK-----LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAM 220 (492)
Q Consensus 146 ~~a~~~~~-----~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (492)
+.+..... -.++|.+||.......
T Consensus 135 ~~~~~~m~~~~~~~g~Iv~isS~~~~~~~--------------------------------------------------- 163 (259)
T d1oaaa_ 135 SGTLNAFQDSPGLSKTVVNISSLCALQPY--------------------------------------------------- 163 (259)
T ss_dssp HHHHHTSCCCTTCEEEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHHHHHhcCCCcccccccccccccCCC---------------------------------------------------
Confidence 98865421 2478999985433211
Q ss_pred hhhhccccccCCCCchHHHHHHHHHHHHHHh---cCCCcEEEEeCCceecC
Q 037479 221 KDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL---KENMSVAIVRPTIITGT 268 (492)
Q Consensus 221 ~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~---~~~~~~~ivRPs~v~g~ 268 (492)
.....|+.||+..+.+.+.. ..++++..|.|+.|-.+
T Consensus 164 -----------~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~ 203 (259)
T d1oaaa_ 164 -----------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred -----------ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence 23468999999999887765 56899999999988765
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.46 E-value=3e-12 Score=121.56 Aligned_cols=224 Identities=13% Similarity=0.099 Sum_probs=140.6
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
-++||+++||||||.||++++++|++.|. +|++..|+.... +... +.+.++. ..++.
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga---~Vii~~r~~~~l---~~~~---------~~l~~~~--------g~~~~ 78 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGA---QCVIASRKMDVL---KATA---------EQISSQT--------GNKVH 78 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHH---HHHH---------HHHHHHH--------SSCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHHHH---HHHH---------HHHHHhc--------CCceE
Confidence 47999999999999999999999999996 568888864321 1111 1122222 36788
Q ss_pred EEecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCcc-------hhHHHHHHHhHHHHHHHHHHHH----h
Q 037479 89 LVPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNFD-------ERYDVALDLNTFGAKHVLNFSK----K 150 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~~-------~~~~~~~~~Nv~gt~~ll~~a~----~ 150 (492)
.+.+|+++ .+..+.+ ..++|+++|+||..... +.+...+.+|..+...+...+. .
T Consensus 79 ~~~~D~~~-------~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 151 (294)
T d1w6ua_ 79 AIQCDVRD-------PDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK 151 (294)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccC-------hHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccccc
Confidence 99999994 3333332 24799999999976432 3456778888888777655432 2
Q ss_pred cccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccccc
Q 037479 151 CAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKI 230 (492)
Q Consensus 151 ~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (492)
...-..++.+||.+.....
T Consensus 152 ~~~~~~i~~~ss~~~~~~~------------------------------------------------------------- 170 (294)
T d1w6ua_ 152 AQKGAAFLSITTIYAETGS------------------------------------------------------------- 170 (294)
T ss_dssp TTCCEEEEEECCTHHHHCC-------------------------------------------------------------
T ss_pred ccccccccccccchhhhcc-------------------------------------------------------------
Confidence 2233456666664332211
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcc
Q 037479 231 YGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGI 305 (492)
Q Consensus 231 ~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 305 (492)
.....|+.+|+..+.+.+.. ..|+++..|.|+.|-.+...... +. ........... .| .
T Consensus 171 -~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~---~~---~~~~~~~~~~~----~p-----l 234 (294)
T d1w6ua_ 171 -GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL---DP---TGTFEKEMIGR----IP-----C 234 (294)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C---CT---TSHHHHHHHTT----CT-----T
T ss_pred -cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc---CC---cHHHHHHHhhc----CC-----C
Confidence 22457999999999888755 46899999999998765432111 11 01111111110 00 1
Q ss_pred cceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 306 VDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 306 ~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
.-+...+|+|+++..++.+....-. |++..+.+|
T Consensus 235 ~R~~~pediA~~v~fL~sd~s~~it--G~~i~vDGG 268 (294)
T d1w6ua_ 235 GRLGTVEELANLAAFLCSDYASWIN--GAVIKFDGG 268 (294)
T ss_dssp SSCBCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred CCCCCHHHHHHHHHHHhCchhcCCC--CcEEEECCC
Confidence 1245679999999998864432222 889999887
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.46 E-value=9.5e-13 Score=120.83 Aligned_cols=201 Identities=11% Similarity=0.075 Sum_probs=130.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+||+||||||+|.||++++++|++.|. +|+++.|.+.... .....+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~---~V~~~~~~~~~~~-------------------------------~~~~~~ 46 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNW---WVASIDVVENEEA-------------------------------SASVIV 46 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSCCTTS-------------------------------SEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCccccc-------------------------------ccccee
Confidence 489999999999999999999999997 4477766554321 222333
Q ss_pred ecCCCCCCCCCCchhh----HHHhcc--CccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhc-ccce
Q 037479 91 PGDITREDLGVKDSNL----REEMWN--KLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKC-AKLI 155 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~----~~~~~~--~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~~ 155 (492)
..|....+ +.+. ...... ++|++||+||.... .+.++..+++|+.++.++.+++... ++-.
T Consensus 47 ~~~~~~~~----~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G 122 (236)
T d1dhra_ 47 KMTDSFTE----QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGG 122 (236)
T ss_dssp CCCSCHHH----HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred ecccCcHH----HHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccccc
Confidence 44443211 1111 111112 58999999985321 1456778999999999998888653 2335
Q ss_pred eEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCc
Q 037479 156 VLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPN 235 (492)
Q Consensus 156 ~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 235 (492)
++|++||....... ....
T Consensus 123 ~Iv~isS~~~~~~~--------------------------------------------------------------~~~~ 140 (236)
T d1dhra_ 123 LLTLAGAKAALDGT--------------------------------------------------------------PGMI 140 (236)
T ss_dssp EEEEECCGGGGSCC--------------------------------------------------------------TTBH
T ss_pred ceeEEccHHHcCCc--------------------------------------------------------------cCCc
Confidence 79999986543211 1235
Q ss_pred hHHHHHHHHHHHHHHh----c---CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccce
Q 037479 236 TYVFTKVMGEMFIEHL----K---ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDV 308 (492)
Q Consensus 236 ~Y~~sK~~aE~~v~~~----~---~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 308 (492)
.|+.||+..+.+.+.. . .++.+..+.|+.|-.+... ... .....-.+
T Consensus 141 ~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~-----------------~~~---------~~~~~~~~ 194 (236)
T d1dhra_ 141 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----------------KSM---------PEADFSSW 194 (236)
T ss_dssp HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-----------------HHS---------TTSCGGGS
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch-----------------hhC---------ccchhhcC
Confidence 8999999999998876 2 4799999999988654321 000 01112357
Q ss_pred eehhhhhhHHHHHHHhhhcCCCCCCcEEEec
Q 037479 309 IPADMVVNAIVVAVVAHAKQPSDVNNIYQVG 339 (492)
Q Consensus 309 v~vddva~~ii~~~~~~~~~~~~~~~iy~i~ 339 (492)
++.+++|+.+..++....... . |.++.+.
T Consensus 195 ~~pe~va~~~~~l~s~~~~~i-~-G~~i~v~ 223 (236)
T d1dhra_ 195 TPLEFLVETFHDWITGNKRPN-S-GSLIQVV 223 (236)
T ss_dssp EEHHHHHHHHHHHHTTTTCCC-T-TCEEEEE
T ss_pred CCHHHHHHHHHHHhCCCccCC-C-CCeEEEE
Confidence 889999999988876433221 2 6666653
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.44 E-value=3.5e-13 Score=123.77 Aligned_cols=206 Identities=12% Similarity=0.113 Sum_probs=130.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
..+||||||+|.||+.++++|++.|+ +|+++.|.+.... .....+.
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~---~V~~~~~~~~~~~-------------------------------~~~~~~~ 47 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGY---TVLNIDLSANDQA-------------------------------DSNILVD 47 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCCTTS-------------------------------SEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCchhcc-------------------------------cccceec
Confidence 46899999999999999999999996 5688888765421 2334455
Q ss_pred cCCCCCCCCCCchhhHHHh--ccCccEEEEcccccCc--------chhHHHHHHHhHHHHHHHHHHHHhcc-cceeEEEe
Q 037479 92 GDITREDLGVKDSNLREEM--WNKLDVVINLAATTNF--------DERYDVALDLNTFGAKHVLNFSKKCA-KLIVLVHV 160 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~--~~~vd~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~~~~V~v 160 (492)
+|....+.-....+..... ..++|++||+||.... .+.++..+++|+.++..+.+++.... .-.++|++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~i 127 (235)
T d1ooea_ 48 GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLT 127 (235)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEe
Confidence 5554221000000111111 1469999999996322 13467789999999999988886642 22479999
Q ss_pred eeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHH
Q 037479 161 STAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFT 240 (492)
Q Consensus 161 ST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~s 240 (492)
||....... .....|+.|
T Consensus 128 sS~~~~~~~--------------------------------------------------------------~~~~~Y~as 145 (235)
T d1ooea_ 128 GAAAAMGPT--------------------------------------------------------------PSMIGYGMA 145 (235)
T ss_dssp CCGGGGSCC--------------------------------------------------------------TTBHHHHHH
T ss_pred ccHHhcCCc--------------------------------------------------------------ccccchHHH
Confidence 986433211 123589999
Q ss_pred HHHHHHHHHHh----c---CCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhh
Q 037479 241 KVMGEMFIEHL----K---ENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADM 313 (492)
Q Consensus 241 K~~aE~~v~~~----~---~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vdd 313 (492)
|+..+.+.+.+ . .++.+..+.|+.+-.+. ...... ......+++.++
T Consensus 146 Kaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~-----------------~~~~~~---------~~~~~~~~~~~~ 199 (235)
T d1ooea_ 146 KAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----------------NRKWMP---------NADHSSWTPLSF 199 (235)
T ss_dssp HHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----------------HHHHST---------TCCGGGCBCHHH
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc-----------------hhhhCc---------CCccccCCCHHH
Confidence 99999998865 2 46788888888764321 111110 112235789999
Q ss_pred hhhHHHHHHHhhhcCCCCCCcEEEecC
Q 037479 314 VVNAIVVAVVAHAKQPSDVNNIYQVGS 340 (492)
Q Consensus 314 va~~ii~~~~~~~~~~~~~~~iy~i~~ 340 (492)
+++.++..+......... |....+.+
T Consensus 200 va~~~~~~l~~~~~~~~t-G~~i~v~~ 225 (235)
T d1ooea_ 200 ISEHLLKWTTETSSRPSS-GALLKITT 225 (235)
T ss_dssp HHHHHHHHHHCGGGCCCT-TCEEEEEE
T ss_pred HHHHHHHHhcCccccCCC-ceEEEEEe
Confidence 999987655533332222 66666643
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.44 E-value=2.6e-12 Score=118.77 Aligned_cols=173 Identities=16% Similarity=0.170 Sum_probs=114.4
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
.|+|||||||+-||+.++++|++...+-.+|++..|++......+.+ .++ ..++.++.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~-------------~~~---------~~~~~~~~ 59 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL-------------AKN---------HSNIHILE 59 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHH-------------HHH---------CTTEEEEE
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-------------Hhc---------CCcEEEEE
Confidence 47999999999999999999986333335779999987654322211 111 26789999
Q ss_pred cCCCCCCCCCCchhhHHHh-----ccCccEEEEcccccCc----c----hhHHHHHHHhHHHHHHHHHHHHhcc------
Q 037479 92 GDITREDLGVKDSNLREEM-----WNKLDVVINLAATTNF----D----ERYDVALDLNTFGAKHVLNFSKKCA------ 152 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~-----~~~vd~Vih~Aa~~~~----~----~~~~~~~~~Nv~gt~~ll~~a~~~~------ 152 (492)
+|+++++- -.+..+.+ ..++|++||+||.... . +.++..+++|+.|+..+.+.+....
T Consensus 60 ~Dvs~~~~---v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~ 136 (248)
T d1snya_ 60 IDLRNFDA---YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKA 136 (248)
T ss_dssp CCTTCGGG---HHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccHHH---HHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhc
Confidence 99996431 01111111 1369999999997432 1 3467889999999998887664321
Q ss_pred --------cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhh
Q 037479 153 --------KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLG 224 (492)
Q Consensus 153 --------~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (492)
+-.++|.+||.. |...+ .+.
T Consensus 137 ~~~~~~~~~~g~ii~i~S~~--g~~~~----~~~---------------------------------------------- 164 (248)
T d1snya_ 137 NESQPMGVGRAAIINMSSIL--GSIQG----NTD---------------------------------------------- 164 (248)
T ss_dssp TTTSCSSTTTCEEEEECCGG--GCSTT----CCS----------------------------------------------
T ss_pred cccccccccccccccccccc--cccCC----CCC----------------------------------------------
Confidence 124788888843 21110 000
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecC
Q 037479 225 IKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGT 268 (492)
Q Consensus 225 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~ 268 (492)
.....|+.||+....+.+.. ..++.+..+.|+.|-.+
T Consensus 165 -------~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 165 -------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred -------CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 12347999999888776544 45899999999887654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.42 E-value=1.6e-12 Score=120.99 Aligned_cols=221 Identities=16% Similarity=0.142 Sum_probs=142.0
Q ss_pred hcCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 9 FLENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 9 ~~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
+++||+||||||+| -||+.++++|++.|. +|++..|+.+. .+++. ++ ... ..+
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~---~V~i~~~~~~~---~~~~~-~~---------~~~---------~~~ 56 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQNDKL---KGRVE-EF---------AAQ---------LGS 56 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSTTT---HHHHH-HH---------HHH---------TTC
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHH-HH---------Hhh---------cCC
Confidence 57899999999999 688999999999996 45777886432 22222 11 011 144
Q ss_pred eEEEecCCCCCCCCCCchhhHHHh-------ccCccEEEEcccccCcc------------hhHHHHHHHhHHHHHHHHHH
Q 037479 87 ITLVPGDITREDLGVKDSNLREEM-------WNKLDVVINLAATTNFD------------ERYDVALDLNTFGAKHVLNF 147 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~-------~~~vd~Vih~Aa~~~~~------------~~~~~~~~~Nv~gt~~ll~~ 147 (492)
...+..|+++. ...... ....|+++|+|+..... +.+.....+|+.+...+.+.
T Consensus 57 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
T d1qsga_ 57 DIVLQCDVAED-------ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 129 (258)
T ss_dssp CCEEECCTTCH-------HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cceeecccchH-------HHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 56677887742 222222 23689999999875321 23566778899999998888
Q ss_pred HHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcc
Q 037479 148 SKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIK 226 (492)
Q Consensus 148 a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (492)
+.... +-..+|++||.......
T Consensus 130 ~~~~~~~~~~Ii~iss~~~~~~~--------------------------------------------------------- 152 (258)
T d1qsga_ 130 CRSMLNPGSALLTLSYLGAERAI--------------------------------------------------------- 152 (258)
T ss_dssp HGGGEEEEEEEEEEECGGGTSBC---------------------------------------------------------
T ss_pred HHHhccCCcEEEEecchhhccCC---------------------------------------------------------
Confidence 87643 23467888875432110
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecC
Q 037479 227 RAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGD 301 (492)
Q Consensus 227 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~ 301 (492)
.....|+.||+.-+.+.+.. ..++++..|+|+.|..+..+.. ............ . .|
T Consensus 153 -----~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~-~---~p-- 214 (258)
T d1qsga_ 153 -----PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-------KDFRKMLAHCEA-V---TP-- 214 (258)
T ss_dssp -----TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-------TTHHHHHHHHHH-H---ST--
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc-------chhhhHHHHHHh-C---CC--
Confidence 22467999999999888765 4689999999999976544221 111111111110 0 11
Q ss_pred CCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 302 VKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 302 ~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
..-+...+|+|+++..++.+....-. |.++.+.+|
T Consensus 215 ---l~R~~~peeia~~v~fL~s~~s~~it--G~~i~vDGG 249 (258)
T d1qsga_ 215 ---IRRTVTIEDVGNSAAFLCSDLSAGIS--GEVVHVDGG 249 (258)
T ss_dssp ---TSSCCCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred ---CCCCcCHHHHHHHHHHHhCchhcCcc--CceEEECcC
Confidence 11256689999999988864432222 788988887
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.40 E-value=8.6e-13 Score=122.33 Aligned_cols=221 Identities=14% Similarity=0.086 Sum_probs=137.0
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+++||||++.||+.++++|++.|. +|.+..|+.+.....+... . ....+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga---~V~i~~r~~~~~~~~~~~~-------------~--------------~~~~~d 51 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGH---TVACHDESFKQKDELEAFA-------------E--------------TYPQLK 51 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGSHHHHHHHH-------------H--------------HCTTSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHhhh-------------C--------------cEEEec
Confidence 789999999999999999999996 4577777654432211111 0 123467
Q ss_pred CCCCCCCCCchhhHHH---hccCccEEEEcccccC-c-------chhHHHHHHHhHHHHHHHHHHHHhcc---cceeEEE
Q 037479 94 ITREDLGVKDSNLREE---MWNKLDVVINLAATTN-F-------DERYDVALDLNTFGAKHVLNFSKKCA---KLIVLVH 159 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~---~~~~vd~Vih~Aa~~~-~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~~~V~ 159 (492)
+++++- ..+..+. .+.++|++||+||... . .+.++..+++|+.|+..+.+.+.... +-.++|+
T Consensus 52 v~~~~~---~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~ 128 (252)
T d1zmta1 52 PMSEQE---PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIF 128 (252)
T ss_dssp ECCCCS---HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCHHH---HHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeec
Confidence 664321 1111222 2247999999998542 1 14578889999999999888765421 2357999
Q ss_pred eeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 160 VSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 160 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
+||....... .....|+.
T Consensus 129 isS~~~~~~~--------------------------------------------------------------~~~~~Y~a 146 (252)
T d1zmta1 129 ITSATPFGPW--------------------------------------------------------------KELSTYTS 146 (252)
T ss_dssp ECCSTTTSCC--------------------------------------------------------------TTCHHHHH
T ss_pred cccccccccc--------------------------------------------------------------cccccccc
Confidence 9986543221 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhh
Q 037479 240 TKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMV 314 (492)
Q Consensus 240 sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddv 314 (492)
||+..+.+.+.. ..|+++..|.|+.|-.+....... .............+.+. .| ..-+...+|+
T Consensus 147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~e~~~~~~~~----~p-----l~R~g~pedv 216 (252)
T d1zmta1 147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYP-TEPWKTNPEHVAHVKKV----TA-----LQRLGTQKEL 216 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCB-HHHHTTCHHHHHHHHHH----SS-----SSSCBCHHHH
T ss_pred ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhh-cccccCCHHHHHHHHhc----CC-----CCCCcCHHHH
Confidence 999998887754 568999999999987654421100 00000001111111110 00 0124568999
Q ss_pred hhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 315 VNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 315 a~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
|++++.++.+...-- + |+++.+.+|
T Consensus 217 A~~v~fL~S~~s~~i-T-G~~i~vdGG 241 (252)
T d1zmta1 217 GELVAFLASGSCDYL-T-GQVFWLAGG 241 (252)
T ss_dssp HHHHHHHHTTSCGGG-T-TCEEEESTT
T ss_pred HHHHHHHhCchhcCC-c-CCeEEECCC
Confidence 999999886433222 1 889999887
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=2.6e-12 Score=118.79 Aligned_cols=172 Identities=15% Similarity=0.168 Sum_probs=116.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||++|||||++.||+.++++|++.|. +|+++.|+..... .+.++ +..+...
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~---~~~~~---------------------l~~~~~~ 55 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGA---SAVLLDLPNSGGE---AQAKK---------------------LGNNCVF 55 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSSHH---HHHHH---------------------HCTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHHH---HHHHH---------------------hCCCccc
Confidence 5899999999999999999999999996 5688888765422 21111 1356677
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-------------chhHHHHHHHhHHHHHHHHHHHHhcc----
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-------------DERYDVALDLNTFGAKHVLNFSKKCA---- 152 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-------------~~~~~~~~~~Nv~gt~~ll~~a~~~~---- 152 (492)
...|+.+........+.........|.++++++.... .+.++..+++|+.|+.++.+++....
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~ 135 (248)
T d2o23a1 56 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNE 135 (248)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSC
T ss_pred ccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhh
Confidence 8888874221000000011122357888888764321 14577889999999999998875431
Q ss_pred -----cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 153 -----KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 153 -----~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
+-.++|++||.......
T Consensus 136 ~~~~~~~G~Ii~isS~~~~~~~---------------------------------------------------------- 157 (248)
T d2o23a1 136 PDQGGQRGVIINTASVAAFEGQ---------------------------------------------------------- 157 (248)
T ss_dssp CCTTSCCEEEEEECCTHHHHCC----------------------------------------------------------
T ss_pred hhccCCceEEEEecchhhccCC----------------------------------------------------------
Confidence 12379999997544211
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYK 270 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~ 270 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|..+..
T Consensus 158 ----~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~ 201 (248)
T d2o23a1 158 ----VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL 201 (248)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchh
Confidence 23468999999999888765 4589999999999876543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.36 E-value=2e-11 Score=114.45 Aligned_cols=221 Identities=12% Similarity=0.067 Sum_probs=132.9
Q ss_pred hcCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 9 FLENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 9 ~~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
+++||++|||||+| -||..++++|++.|. +|++..|++.. .++++ + +.++ ...
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga---~V~i~~r~~~~---~~~~~-~---------l~~~---------~~~ 56 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGA---TLAFTYLNESL---EKRVR-P---------IAQE---------LNS 56 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTC---EEEEEESSTTT---HHHHH-H---------HHHH---------TTC
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-H---------HHhh---------CCc
Confidence 57899999999988 699999999999996 45888887432 22222 1 1111 244
Q ss_pred eEEEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCcc--------hhHH---HHHHHhHHHHHHHHHHH
Q 037479 87 ITLVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNFD--------ERYD---VALDLNTFGAKHVLNFS 148 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~--------~~~~---~~~~~Nv~gt~~ll~~a 148 (492)
..++..|+++ ++..+.++ ..+|+++|+|+..... .... ....++..+........
T Consensus 57 ~~~~~~d~~~-------~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (274)
T d2pd4a1 57 PYVYELDVSK-------EEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTL 129 (274)
T ss_dssp CCEEECCTTC-------HHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eeEeeecccc-------hhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccc
Confidence 5678899984 33322333 4799999999965321 1122 22333344455555554
Q ss_pred HhcccceeEEEeee-ceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccc
Q 037479 149 KKCAKLIVLVHVST-AFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKR 227 (492)
Q Consensus 149 ~~~~~~~~~V~vST-~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (492)
.+..+-...|.++| .......
T Consensus 130 ~~~~~~~~~i~~~s~~~~~~~~---------------------------------------------------------- 151 (274)
T d2pd4a1 130 KPLLNNGASVLTLSYLGSTKYM---------------------------------------------------------- 151 (274)
T ss_dssp GGGEEEEEEEEEEECGGGTSBC----------------------------------------------------------
T ss_pred ccccccCcceeeeccccccccc----------------------------------------------------------
Confidence 44333334444333 2222111
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCC
Q 037479 228 AKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDV 302 (492)
Q Consensus 228 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~ 302 (492)
.....|+.+|+..+.+.+.. ..|+++..+.|+.+..+...... ........... .
T Consensus 152 ----~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~-------~~~~~~~~~~~---------~ 211 (274)
T d2pd4a1 152 ----AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-------DFRMILKWNEI---------N 211 (274)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-------THHHHHHHHHH---------H
T ss_pred ----ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC-------chHHHHHHHhh---------h
Confidence 34568999999999887654 46899999999988765442211 11111111100 0
Q ss_pred CcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 303 KGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 303 ~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
....-+...+|+|+++..++.+....- + |+++.+.+|
T Consensus 212 ~p~~r~~~pedIA~~v~fL~S~~s~~i-t-G~~i~vDGG 248 (274)
T d2pd4a1 212 APLRKNVSLEEVGNAGMYLLSSLSSGV-S-GEVHFVDAG 248 (274)
T ss_dssp STTSSCCCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred hhccCCcCHHHHHHHHHHHhChhhCCC-c-CceEEECCC
Confidence 111235779999999999887543222 2 889999888
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=4.1e-12 Score=118.91 Aligned_cols=174 Identities=14% Similarity=0.123 Sum_probs=114.9
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
.++||++||||||+.||++++++|++.|. +|++..|+... .+.+.++ +.. .....+.
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~---~Vil~~r~~~~---l~~~~~~---------~~~--------~~~~~~~ 67 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGA---HVVVTARSKET---LQKVVSH---------CLE--------LGAASAH 67 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHH--------HTCSEEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------Hhh--------hhcccch
Confidence 37899999999999999999999999996 56898886432 1111111 111 1135678
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc--cceeEEE
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA--KLIVLVH 159 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--~~~~~V~ 159 (492)
.+.+|+++........+........+|+++|+|+.... .+.+...+++|+.|+..+.+.+.... +-.++|.
T Consensus 68 ~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~ 147 (269)
T d1xu9a_ 68 YIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVV 147 (269)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceE
Confidence 88899884321000000111223468999999987532 14577889999999998888775421 1247888
Q ss_pred eeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHH
Q 037479 160 VSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVF 239 (492)
Q Consensus 160 vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~ 239 (492)
+||....-.. .....|+.
T Consensus 148 isS~~~~~~~--------------------------------------------------------------p~~~~Y~a 165 (269)
T d1xu9a_ 148 VSSLAGKVAY--------------------------------------------------------------PMVAAYSA 165 (269)
T ss_dssp EEEGGGTSCC--------------------------------------------------------------TTCHHHHH
T ss_pred eccchhcCCC--------------------------------------------------------------CCchHHHH
Confidence 8885432110 23468999
Q ss_pred HHHHHHHHHHHh-------cCCCcEEEEeCCceec
Q 037479 240 TKVMGEMFIEHL-------KENMSVAIVRPTIITG 267 (492)
Q Consensus 240 sK~~aE~~v~~~-------~~~~~~~ivRPs~v~g 267 (492)
||+..+.+.+.. ..++.+..+.|+.|-.
T Consensus 166 sKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T 200 (269)
T d1xu9a_ 166 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDT 200 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCC
T ss_pred HHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCC
Confidence 999988877654 1368889999987643
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=9e-11 Score=109.95 Aligned_cols=124 Identities=19% Similarity=0.161 Sum_probs=87.7
Q ss_pred CCCEE-EEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 11 ENKTI-LVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 11 ~~~~v-lITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
+||+| +||||++-||..++++|++. |. +|++..|+... .+... +.|+++ ..++.
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~---~Vi~~~r~~~~---~~~~~---------~~l~~~---------~~~~~ 56 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG---DVVLTARDVTR---GQAAV---------QQLQAE---------GLSPR 56 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSS---EEEEEESSHHH---HHHHH---------HHHHHT---------TCCCE
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCC---EEEEEECCHHH---HHHHH---------HHHHhc---------CCcEE
Confidence 36776 89999999999999999987 64 67888886432 11111 112222 25678
Q ss_pred EEecCCCCCCCCCCchhhHHHhc-------cCccEEEEcccccCc-------chhHHHHHHHhHHHHHHHHHHHHhcc-c
Q 037479 89 LVPGDITREDLGVKDSNLREEMW-------NKLDVVINLAATTNF-------DERYDVALDLNTFGAKHVLNFSKKCA-K 153 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~~~-~ 153 (492)
++.+|+++ .+..+.++ .++|++||+||.... ++.++..+++|+.|+..+.+.+.... .
T Consensus 57 ~~~~Dvs~-------~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~ 129 (275)
T d1wmaa1 57 FHQLDIDD-------LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP 129 (275)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred EEEEecCC-------HHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999994 44333332 379999999997532 24567789999999999999887632 2
Q ss_pred ceeEEEeeecee
Q 037479 154 LIVLVHVSTAFV 165 (492)
Q Consensus 154 ~~~~V~vST~~v 165 (492)
-.++|.+||...
T Consensus 130 ~g~ivnisS~~~ 141 (275)
T d1wmaa1 130 QGRVVNVSSIMS 141 (275)
T ss_dssp EEEEEEECCHHH
T ss_pred cCCcccccccce
Confidence 247999998654
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.22 E-value=3.5e-11 Score=112.38 Aligned_cols=232 Identities=16% Similarity=0.062 Sum_probs=135.8
Q ss_pred hcCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 9 FLENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 9 ~~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
.++||++|||||+| .||.+++++|++.|. +|++..|++.. ..+++. ++ ...+
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga---~Vil~~~~~~~--~~~~~~-------------~~--------~~~~ 56 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA---QLVLTGFDRLR--LIQRIT-------------DR--------LPAK 56 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC---EEEEEECSCHH--HHHHHH-------------TT--------SSSC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC---EEEEEeCChHH--HHHHHH-------------HH--------cCCc
Confidence 57899999999765 499999999999996 55777775421 112221 11 2356
Q ss_pred eEEEecCCCCCCCCCCchhhHH---Hhc---cCccEEEEcccccCc---------c---hhHHHHHHHhHHHHHHHHHHH
Q 037479 87 ITLVPGDITREDLGVKDSNLRE---EMW---NKLDVVINLAATTNF---------D---ERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 87 v~~v~gDl~~~~lgl~~~~~~~---~~~---~~vd~Vih~Aa~~~~---------~---~~~~~~~~~Nv~gt~~ll~~a 148 (492)
...+++|+++++- ..+..+ ..+ ..+|+++|+|+.... + +.+...+.+|+.+.....+.+
T Consensus 57 ~~~~~~dv~~~~~---~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (268)
T d2h7ma1 57 APLLELDVQNEEH---LASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKAL 133 (268)
T ss_dssp CCEEECCTTCHHH---HHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eeeEeeecccccc---cccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHH
Confidence 7788999995320 011111 112 358999999995421 1 234556777888887777777
Q ss_pred HhcccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhcccc
Q 037479 149 KKCAKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRA 228 (492)
Q Consensus 149 ~~~~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (492)
....+-...+.++|.......
T Consensus 134 ~~~~~~~~~i~~~s~~~~~~~----------------------------------------------------------- 154 (268)
T d2h7ma1 134 LPIMNPGGSIVGMDFDPSRAM----------------------------------------------------------- 154 (268)
T ss_dssp GGGEEEEEEEEEEECCCSSCC-----------------------------------------------------------
T ss_pred hhhcccccccccccccccccC-----------------------------------------------------------
Confidence 665333344444443222111
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcC---chHHHHHhccCceeeEEec
Q 037479 229 KIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIR---TIDSLAVGYGKGRLTCFLG 300 (492)
Q Consensus 229 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~---~~~~~~~~~~~g~~~~~~~ 300 (492)
.....|+.+|+..+.+.+.. ..++++..|.|+.|-.+..+.+.+...... ....+...+... .
T Consensus 155 ---p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-- 225 (268)
T d2h7ma1 155 ---PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR----A-- 225 (268)
T ss_dssp ---TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH----C--
T ss_pred ---cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhc----C--
Confidence 23468999999999988755 458999999999887643211111000000 000111111000 0
Q ss_pred CCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 301 ~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
...+-+...+|+|+++..++.+....- + |+++.+.+|
T Consensus 226 --pl~rr~~~p~dva~~v~fL~Sd~a~~i-T-G~~i~vDGG 262 (268)
T d2h7ma1 226 --PIGWNMKDATPVAKTVCALLSDWLPAT-T-GDIIYADGG 262 (268)
T ss_dssp --TTCCCTTCCHHHHHHHHHHHSSSCTTC-C-SEEEEESTT
T ss_pred --CCCCCCCCHHHHHHHHHHHhCchhcCc-c-CCEEEECcC
Confidence 001124568999999998886322222 2 888888887
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.19 E-value=2.6e-10 Score=104.42 Aligned_cols=204 Identities=15% Similarity=0.133 Sum_probs=131.1
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|++||||||+.||+.++++|++.|. +|++..|++.. .+...++
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga---~V~i~~~~~~~---------------------------------~~~~~~~ 44 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGY---RVVVLDLRREG---------------------------------EDLIYVE 44 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSCCS---------------------------------SSSEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCccc---------------------------------ccceEee
Confidence 48999999999999999999999996 55888886543 3445678
Q ss_pred cCCCCCCCCCCchhhHHHhc------cCccEEEEcccccCc-----------chhHHHHHHHhHHHHHHHHHHHHhc---
Q 037479 92 GDITREDLGVKDSNLREEMW------NKLDVVINLAATTNF-----------DERYDVALDLNTFGAKHVLNFSKKC--- 151 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~------~~vd~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (492)
+|++... ....+. ...+.+++.++.... .+.++..+++|+.+...+.+.+...
T Consensus 45 ~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 117 (241)
T d1uaya_ 45 GDVTREE-------DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRE 117 (241)
T ss_dssp CCTTCHH-------HHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred ccccchh-------hhHHHHHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Confidence 8887432 221221 245555665553211 1456778899999988887766432
Q ss_pred ------ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhc
Q 037479 152 ------AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGI 225 (492)
Q Consensus 152 ------~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (492)
.+-.++|++||.......
T Consensus 118 ~~~~~~~~~G~Ii~isS~~~~~~~-------------------------------------------------------- 141 (241)
T d1uaya_ 118 NPPDAEGQRGVIVNTASVAAFEGQ-------------------------------------------------------- 141 (241)
T ss_dssp CCCCTTSCSEEEEEECCTHHHHCC--------------------------------------------------------
T ss_pred hhhhcccCceeeeeecchhhccCC--------------------------------------------------------
Confidence 022479999996543211
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEec
Q 037479 226 KRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLG 300 (492)
Q Consensus 226 ~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~ 300 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.|-.+...... ........... +.
T Consensus 142 ------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~---------~~~~~~~~~~~----~~ 202 (241)
T d1uaya_ 142 ------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---------EKAKASLAAQV----PF 202 (241)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---------HHHHHHHHTTC----CS
T ss_pred ------CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh---------hhHHHHHHhcC----CC
Confidence 23468999999999888755 46899999999998654321110 01111111110 00
Q ss_pred CCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 301 DVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 301 ~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
. .-+.-.+|+|++++.++.. .-.. |++..+.+|
T Consensus 203 ~----~R~g~pedvA~~v~fL~s~-~~iT---G~~i~VDGG 235 (241)
T d1uaya_ 203 P----PRLGRPEEYAALVLHILEN-PMLN---GEVVRLDGA 235 (241)
T ss_dssp S----CSCCCHHHHHHHHHHHHHC-TTCC---SCEEEESTT
T ss_pred C----CCCcCHHHHHHHHHHHHhC-CCCC---CCEEEECCc
Confidence 0 1234579999999888763 2122 889998877
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.12 E-value=5.3e-10 Score=105.74 Aligned_cols=243 Identities=12% Similarity=0.040 Sum_probs=135.7
Q ss_pred cCCCEEEEeCCcc--hhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 10 LENKTILVTGATG--FLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 10 ~~~~~vlITGatG--flG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
++||++|||||+| -||+.++++|++.|. +|++..|+............ .... ...+. ... ......++
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~Ga---~Vvi~~~~~~~~~~~~~~~~--~~~~-~~~~~---~~~-~~~~~~~~ 75 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGA---EILVGTWVPALNIFETSLRR--GKFD-QSRVL---PDG-SLMEIKKV 75 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEEEHHHHHHHHHHHHT--TTTT-GGGBC---TTS-SBCCEEEE
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC---EEEEEeCchhhhhhHHHHHH--hhhh-hhhhh---hhh-hhhhhhhh
Confidence 6899999999987 799999999999996 55777776432111111100 0000 00000 000 00001233
Q ss_pred EEEecCCCCCCCCC-----------C----chhhHHH---hccCccEEEEcccccC-----c----chhHHHHHHHhHHH
Q 037479 88 TLVPGDITREDLGV-----------K----DSNLREE---MWNKLDVVINLAATTN-----F----DERYDVALDLNTFG 140 (492)
Q Consensus 88 ~~v~gDl~~~~lgl-----------~----~~~~~~~---~~~~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv~g 140 (492)
..+..++..+..-. + ..+..+. -+.++|++||+||... + .+.+...+++|+.+
T Consensus 76 ~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~ 155 (297)
T d1d7oa_ 76 YPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYS 155 (297)
T ss_dssp EEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHH
T ss_pred hhhhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhh
Confidence 34444333221100 0 0111112 2347999999998632 2 14578899999999
Q ss_pred HHHHHHHHHhcccc-eeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHH
Q 037479 141 AKHVLNFSKKCAKL-IVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLA 219 (492)
Q Consensus 141 t~~ll~~a~~~~~~-~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (492)
+..+++.+...... ...+.+|+.......
T Consensus 156 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------------------------------------------------- 185 (297)
T d1d7oa_ 156 FVSLLSHFLPIMNPGGASISLTYIASERII-------------------------------------------------- 185 (297)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEECGGGTSCC--------------------------------------------------
T ss_pred hhhhhhHHHHHhhcCCcceeeeehhhcccc--------------------------------------------------
Confidence 99999988764322 234444443222111
Q ss_pred HhhhhccccccCCCCchHHHHHHHHHHHHHHh------cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCc
Q 037479 220 MKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL------KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKG 293 (492)
Q Consensus 220 ~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~------~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g 293 (492)
......|..+|+..+.+.+.. +.++++..|.|+.|..+..... .....+.......
T Consensus 186 -----------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~~ 247 (297)
T d1d7oa_ 186 -----------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNN 247 (297)
T ss_dssp -----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHH
T ss_pred -----------cccccceecccccccccccccchhccccceEEecccccccccchhhhhc-------cCCHHHHHHHHhC
Confidence 023457999998888776543 3589999999999876554221 1122222222111
Q ss_pred eeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 294 RLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 294 ~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
. | ..-+...+|+|++++.++......-. |+++.+.+|
T Consensus 248 ~----P-----lgR~~~peevA~~v~fL~S~~a~~it--Gq~i~vDGG 284 (297)
T d1d7oa_ 248 A----P-----IQKTLTADEVGNAAAFLVSPLASAIT--GATIYVDNG 284 (297)
T ss_dssp S----S-----SCCCBCHHHHHHHHHHHTSGGGTTCC--SCEEEESTT
T ss_pred C----C-----CCCCCCHHHHHHHHHHHhCchhcCCc--CceEEECcC
Confidence 0 0 11246689999999998864333222 788888877
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.04 E-value=4.6e-09 Score=98.40 Aligned_cols=223 Identities=14% Similarity=0.053 Sum_probs=132.7
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
.++||||++-||+.++++|++.|. +|++..|+... ..+.+.+ .+..+. ......+.+|
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga---~V~i~~~~~~~--~~~~~~~---------~l~~~~--------~~~~~~~~~d 61 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSAA--EANALSA---------TLNARR--------PNSAITVQAD 61 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHH---------HHHHHS--------TTCEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCC---EEEEEeCCCHH--HHHHHHH---------HHHhhc--------CCceEEEEee
Confidence 579999999999999999999996 44666664321 1222221 112221 2445556666
Q ss_pred CCCCC----------CCCCchhhHHHhc-------cCccEEEEcccccCcc---------------------hhHHHHHH
Q 037479 94 ITRED----------LGVKDSNLREEMW-------NKLDVVINLAATTNFD---------------------ERYDVALD 135 (492)
Q Consensus 94 l~~~~----------lgl~~~~~~~~~~-------~~vd~Vih~Aa~~~~~---------------------~~~~~~~~ 135 (492)
..... ..+++.+..++++ .++|++||+||..... ..+...+.
T Consensus 62 ~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (284)
T d1e7wa_ 62 LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFG 141 (284)
T ss_dssp CSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHh
Confidence 44322 1122444444433 4799999999975321 11234678
Q ss_pred HhHHHHHHHHHHHHhc---------ccceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 037479 136 LNTFGAKHVLNFSKKC---------AKLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNEL 206 (492)
Q Consensus 136 ~Nv~gt~~ll~~a~~~---------~~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (492)
+|+.++..+.+.+.+. .+-.++|.+||.......
T Consensus 142 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~------------------------------------- 184 (284)
T d1e7wa_ 142 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------------------------------- 184 (284)
T ss_dssp HHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC-------------------------------------
T ss_pred hheeeeeeeeccccchhhhhHHHhcCCCCcccccccccccCCc-------------------------------------
Confidence 8999999888876542 112356666654322111
Q ss_pred HhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcC
Q 037479 207 QAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIR 281 (492)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~ 281 (492)
.....|+.||+..+.+.+.. ..|+++..|.|+.+-....
T Consensus 185 -------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~----------- 228 (284)
T d1e7wa_ 185 -------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD----------- 228 (284)
T ss_dssp -------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG-----------
T ss_pred -------------------------cceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc-----------
Confidence 12458999999999888765 4589999999986322111
Q ss_pred chHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 282 TIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 282 ~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
............. +. ..-+...+|+|++++.++.....-- + |+++.+.+|
T Consensus 229 ~~~~~~~~~~~~~----pl----~~R~~~peeiA~~v~fL~S~~s~~i-t-G~~i~VDGG 278 (284)
T d1e7wa_ 229 MPPAVWEGHRSKV----PL----YQRDSSAAEVSDVVIFLCSSKAKYI-T-GTCVKVDGG 278 (284)
T ss_dssp SCHHHHHHHHTTC----TT----TTSCBCHHHHHHHHHHHHSGGGTTC-C-SCEEEESTT
T ss_pred CCHHHHHHHHhcC----CC----CCCCCCHHHHHHHHHHHhCchhcCc-c-CCeEEECcC
Confidence 1112222222111 10 1124578999999999886443222 2 889999887
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.04 E-value=2e-09 Score=103.26 Aligned_cols=185 Identities=9% Similarity=0.110 Sum_probs=108.1
Q ss_pred CCCEEEEeC--CcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 11 ENKTILVTG--ATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 11 ~~~~vlITG--atGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
++|.+|||| ++.-||..++++|.+.|. +|++..|+............+-+...... . .........
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA---~V~i~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~ 68 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNV---KIIFGIWPPVYNIFMKNYKNGKFDNDMII----D-----KDKKMNILD 68 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTC---EEEEEECGGGHHHHHHHHHTTTTTGGGEE----T-----TTEECCEEE
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCC---EEEEEeCchhhhhhhHHHHHHhhhhHHHH----H-----HHhhhhhhh
Confidence 478999999 557899999999999996 45776665432211111100000000000 0 000011222
Q ss_pred EEecCCCCCCC-------------CCCchhhH-------HHhccCccEEEEcccccC-----c----chhHHHHHHHhHH
Q 037479 89 LVPGDITREDL-------------GVKDSNLR-------EEMWNKLDVVINLAATTN-----F----DERYDVALDLNTF 139 (492)
Q Consensus 89 ~v~gDl~~~~l-------------gl~~~~~~-------~~~~~~vd~Vih~Aa~~~-----~----~~~~~~~~~~Nv~ 139 (492)
....|...... .+.+.+.. ...+.++|++||+||... + .+.+...+++|+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~ 148 (329)
T d1uh5a_ 69 MLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSY 148 (329)
T ss_dssp EEECCTTCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccceehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchh
Confidence 33333321100 00011111 122358999999998542 2 1467889999999
Q ss_pred HHHHHHHHHHhcc-cceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHH
Q 037479 140 GAKHVLNFSKKCA-KLIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITL 218 (492)
Q Consensus 140 gt~~ll~~a~~~~-~~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (492)
|+..+++.+.... .-.++|.+||...... +|
T Consensus 149 ~~~~~~k~~~~~m~~~GsIv~iss~~~~~~---------~p--------------------------------------- 180 (329)
T d1uh5a_ 149 SLISLCKYFVNIMKPQSSIISLTYHASQKV---------VP--------------------------------------- 180 (329)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSC---------CT---------------------------------------
T ss_pred HHHHHHHHHHhhcccccccccceeehhccc---------cc---------------------------------------
Confidence 9999999887643 2347888876432211 11
Q ss_pred HHhhhhccccccCCCCchHHHHHHHHHHHHHHh-----c-CCCcEEEEeCCceecC
Q 037479 219 AMKDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----K-ENMSVAIVRPTIITGT 268 (492)
Q Consensus 219 ~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~-~~~~~~ivRPs~v~g~ 268 (492)
++...|+.||+..|.+.+.. . .|+++..|.|+.|-.+
T Consensus 181 -------------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~ 223 (329)
T d1uh5a_ 181 -------------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp -------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCT
T ss_pred -------------ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccch
Confidence 23457999999999888754 2 4899999999988653
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.00 E-value=2.4e-08 Score=92.37 Aligned_cols=220 Identities=14% Similarity=0.120 Sum_probs=128.9
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+.|||||++-||+.++++|++.|. +|++..|+.... .+++.++ +.+.. ..++..+..|
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~---~Vvi~~r~~~~~--~~~~~~~---------~~~~~--------~~~~~~~~~~ 60 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGF---RVVVHYRHSEGA--AQRLVAE---------LNAAR--------AGSAVLCKGD 60 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHH--HHHHHHH---------HHHHS--------TTCEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCchHH--HHHHHHH---------HHhhc--------CCceEEEecc
Confidence 689999999999999999999996 558888764321 2222211 11111 2456666666
Q ss_pred CCCCCCCCCchhhHHH-------hccCccEEEEcccccCc------------------chhHHHHHHHhHHHHHHHHHHH
Q 037479 94 ITREDLGVKDSNLREE-------MWNKLDVVINLAATTNF------------------DERYDVALDLNTFGAKHVLNFS 148 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~-------~~~~vd~Vih~Aa~~~~------------------~~~~~~~~~~Nv~gt~~ll~~a 148 (492)
+..... .++.... .+.++|++||+||.... +.........|..+.......+
T Consensus 61 ~~~~~~---~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (266)
T d1mxha_ 61 LSLSSS---LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAF 137 (266)
T ss_dssp CSSSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cccchh---HHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhh
Confidence 653221 2222222 22479999999996532 1123445666777766666655
Q ss_pred Hhccc--------ceeEEEeeeceeecccccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Q 037479 149 KKCAK--------LIVLVHVSTAFVWGEESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAM 220 (492)
Q Consensus 149 ~~~~~--------~~~~V~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (492)
..... ...++.+|+......
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------- 165 (266)
T d1mxha_ 138 ARRQGEGGAWRSRNLSVVNLCDAMTDLP---------------------------------------------------- 165 (266)
T ss_dssp HHTC-------CCCEEEEEECCGGGGSC----------------------------------------------------
T ss_pred ccccccccccccccccchhhhhcccccc----------------------------------------------------
Confidence 54321 113333333221111
Q ss_pred hhhhccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCcee
Q 037479 221 KDLGIKRAKIYGWPNTYVFTKVMGEMFIEHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRL 295 (492)
Q Consensus 221 ~~~~~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~ 295 (492)
......|+.||+.-+.+.+.. ..|+++..|.|+.|..+...+ ......+....
T Consensus 166 ----------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-----------~~~~~~~~~~~- 223 (266)
T d1mxha_ 166 ----------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-----------QETQEEYRRKV- 223 (266)
T ss_dssp ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----------HHHHHHHHTTC-
T ss_pred ----------CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----------HHHHHHHHhcC-
Confidence 123568999999999887755 468999999999876443211 11221111110
Q ss_pred eEEecCCCcccceeehhhhhhHHHHHHHhhhcCCCCCCcEEEecCC
Q 037479 296 TCFLGDVKGIVDVIPADMVVNAIVVAVVAHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 296 ~~~~~~~~~~~d~v~vddva~~ii~~~~~~~~~~~~~~~iy~i~~~ 341 (492)
+. .+-+...+|||++++.++.+...--. |+++.+.+|
T Consensus 224 ---pl----~r~~~~peeva~~v~fL~s~~s~~it--G~~i~vDGG 260 (266)
T d1mxha_ 224 ---PL----GQSEASAAQIADAIAFLVSKDAGYIT--GTTLKVDGG 260 (266)
T ss_dssp ---TT----TSCCBCHHHHHHHHHHHHSGGGTTCC--SCEEEESTT
T ss_pred ---CC----CCCCCCHHHHHHHHHHHhCchhCCcc--CCeEEECcc
Confidence 00 01235689999999999875432221 889999887
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.88 E-value=4.8e-09 Score=96.76 Aligned_cols=237 Identities=10% Similarity=0.041 Sum_probs=122.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|.|+||||+|.||+.++++|++.|. +|+++.|++... ..
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga---~V~~~~~~~~~~--------------------------------------~~ 40 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGH---QIVGIDIRDAEV--------------------------------------IA 40 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSSE--------------------------------------EC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECChHHH--------------------------------------HH
Confidence 6889999999999999999999996 558888764321 12
Q ss_pred CCCCCCCCCC-chhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcc---cceeEEEeeeceeecc
Q 037479 93 DITREDLGVK-DSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCA---KLIVLVHVSTAFVWGE 168 (492)
Q Consensus 93 Dl~~~~lgl~-~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---~~~~~V~vST~~v~~~ 168 (492)
|+.+..-... ..+........+|+++|+|+.....+.+.....+|..+...+.+...... .......+++......
T Consensus 41 d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (257)
T d1fjha_ 41 DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHL 120 (257)
T ss_dssp CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSS
T ss_pred HhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccch
Confidence 3331100000 00001111236899999999776667777788899998887776543321 2334444444222111
Q ss_pred cccceeccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCcHHHHHHHHhhhhccccccCCCCchHHHHHHHHHHHH
Q 037479 169 ESGMLYESSFKMGDTLNGASGLDIDVERQVVEQELNELQAEGASEEAITLAMKDLGIKRAKIYGWPNTYVFTKVMGEMFI 248 (492)
Q Consensus 169 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~Y~~sK~~aE~~v 248 (492)
.. . ..+ ..... ..-..-.+.......+ .......|+.||+..+.+.
T Consensus 121 ~~----~-~~~----------~~~~~--------------~~g~~~~i~s~~~~~~-----~~~~~~~Y~asKaal~~lt 166 (257)
T d1fjha_ 121 AF----D-KNP----------LALAL--------------EAGEEAKARAIVEHAG-----EQGGNLAYAGSKNALTVAV 166 (257)
T ss_dssp CG----G-GCT----------THHHH--------------HHTCHHHHHHHHHTCC-----TTHHHHHHHHHHHHHHHHH
T ss_pred hh----h-hhh----------hhhhc--------------cCCcEEEEeeehhccC-----CCcchHHHHHHhhhhhccc
Confidence 00 0 000 00000 0000000000000000 0001236999999999998
Q ss_pred HHh-----cCCCcEEEEeCCceecCCCCCCCccccCcCchHHHHHhccCceeeEEecCCCcccceeehhhhhhHHHHHHH
Q 037479 249 EHL-----KENMSVAIVRPTIITGTYKEPFPGWAEGIRTIDSLAVGYGKGRLTCFLGDVKGIVDVIPADMVVNAIVVAVV 323 (492)
Q Consensus 249 ~~~-----~~~~~~~ivRPs~v~g~~~~p~~gw~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~v~vddva~~ii~~~~ 323 (492)
+.. ..|+++..|.|+.|-.+..+.. ... ........+ .....--+...+|+|+++..++.
T Consensus 167 r~lA~el~~~gIrVN~I~PG~i~T~~~~~~---~~~----~~~~~~~~~--------~~~PlgR~g~p~eva~~v~fL~S 231 (257)
T d1fjha_ 167 RKRAAAWGEAGVRLNTIAPGATETPLLQAG---LQD----PRYGESIAK--------FVPPMGRRAEPSEMASVIAFLMS 231 (257)
T ss_dssp HHTHHHHHHTTCEEEEEEECC------------------------------------CCCSTTSCCCTHHHHHHHHHHTS
T ss_pred cccccccccccccccccccCCcCChhHHhh---cCC----HHHHHHHHh--------cCCCCCCCcCHHHHHHHHHHHhC
Confidence 765 5689999999999865433110 000 000000000 00011124568999999999886
Q ss_pred hhhcCCCCCCcEEEecCC
Q 037479 324 AHAKQPSDVNNIYQVGSS 341 (492)
Q Consensus 324 ~~~~~~~~~~~iy~i~~~ 341 (492)
.....- + |++..+.+|
T Consensus 232 ~~s~~i-t-G~~i~vDGG 247 (257)
T d1fjha_ 232 PAASYV-H-GAQIVIDGG 247 (257)
T ss_dssp GGGTTC-C-SCEEEESTT
T ss_pred chhCCc-c-CceEEeCCC
Confidence 443322 2 888988877
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.61 E-value=1.5e-08 Score=88.94 Aligned_cols=82 Identities=16% Similarity=0.148 Sum_probs=61.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++||+|+||||+|.+|+.+++.|++.|. +|++..|+.... +.+. +.+... .++..
T Consensus 21 l~gK~vlItGasgGIG~~ia~~la~~G~---~V~~~~r~~~~~---~~~~---------~~~~~~----------~~~~~ 75 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAALLAGEGA---EVVLCGRKLDKA---QAAA---------DSVNKR----------FKVNV 75 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHHH---HHHH---------HHHHHH----------HTCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhhcc---chhhcccchHHH---HHHH---------HHHHhc----------cchhh
Confidence 6899999999999999999999999995 568888874321 1111 111111 34456
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAAT 123 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~ 123 (492)
..+|++ +.+..+++++++|+|||+||.
T Consensus 76 ~~~d~~-------~~~~~~~~~~~iDilin~Ag~ 102 (191)
T d1luaa1 76 TAAETA-------DDASRAEAVKGAHFVFTAGAI 102 (191)
T ss_dssp EEEECC-------SHHHHHHHTTTCSEEEECCCT
T ss_pred hhhhcc-------cHHHHHHHhcCcCeeeecCcc
Confidence 778988 666677888999999999985
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.60 E-value=7e-05 Score=61.35 Aligned_cols=115 Identities=15% Similarity=0.092 Sum_probs=73.8
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+|.|+||+|.+|++++..|..++ -+..+.++...+. ..+.+ ++.....| .... .-
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~-~~~elvLiDi~~~---~~~a~--Dl~~~~~~----------------~~~~---~~ 56 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSP-LVSRLTLYDIAHT---PGVAA--DLSHIETR----------------ATVK---GY 56 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCT-TCSEEEEEESSSH---HHHHH--HHTTSSSS----------------CEEE---EE
T ss_pred eEEEECCCChHHHHHHHHHHhCC-ccceEEEEecccc---chhhH--HHhhhhhh----------------cCCC---eE
Confidence 79999999999999998887765 4677777765421 11111 11111000 1111 11
Q ss_pred CCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 94 ITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
+. ..+. .+.++++|+|+-+||..+- .+...+.++.|+.-.+.+++.+++. +.+.++.+-|
T Consensus 57 ~~-------~~~~-~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvt 117 (144)
T d1mlda1 57 LG-------PEQL-PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICIIS 117 (144)
T ss_dssp ES-------GGGH-HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred Ec-------CCCh-HHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEec
Confidence 11 1222 3566899999999996433 2344567899999999999999998 6666666654
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.56 E-value=0.00038 Score=56.81 Aligned_cols=120 Identities=14% Similarity=0.079 Sum_probs=73.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+||+|.+|..++..|+.++ -+..+.++.+.+.-. ..+.+..++ .+.. .....++....+
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~-l~~el~L~D~~~~~~-~~~g~a~Dl-----~~~~---------~~~~~~~~~~~~ 64 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEP-FMKDLVLIGREHSIN-KLEGLREDI-----YDAL---------AGTRSDANIYVE 64 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCT-TCCEEEEEECGGGHH-HHHHHHHHH-----HHHH---------TTSCCCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-cccccccccchhhhH-hhhcccccc-----hhcc---------cccccCCccccC
Confidence 689999999999999999888765 346778877754211 111111011 1100 001122232111
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
- ..+ . ..++++|+|+-+||..+- .+.-.+.++.|..-.+.+.+..++. +.+.++.+
T Consensus 65 ~---------~~d-~-~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~iivV 121 (145)
T d1hyea1 65 S---------DEN-L-RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-CDTKIFVI 121 (145)
T ss_dssp E---------TTC-G-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CCCEEEEC
T ss_pred C---------cch-H-HHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc-CCCeEEEE
Confidence 0 011 1 445799999999997543 3455678999999999999998886 33444434
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.45 E-value=0.00018 Score=58.82 Aligned_cols=116 Identities=16% Similarity=0.092 Sum_probs=71.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+||+|.+|++++..|......+..+.++...+. . ..+-+ ++..... ......+.+
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~-~g~a~--Dl~h~~~----------------~~~~~~~~~ 60 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-T-PGVAV--DLSHIPT----------------AVKIKGFSG 60 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-H-HHHHH--HHHTSCS----------------SCEEEEECS
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-c-hhHHH--HHHCCcc----------------ccCCcEEEc
Confidence 68999999999999999887655344567777765321 1 11111 1111110 122222222
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccC-cchhHHHHHHHhHHHHHHHHHHHHhccccee-EEEee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTN-FDERYDVALDLNTFGAKHVLNFSKKCAKLIV-LVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~-~V~vS 161 (492)
..+ . ..++++|+||-+||..+ ..+.-.+.++.|..-.+.+.+...+. +.+. +|.+|
T Consensus 61 ----------~~~-~-~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~-~p~aivivvt 118 (145)
T d2cmda1 61 ----------EDA-T-PALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIIT 118 (145)
T ss_dssp ----------SCC-H-HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred ----------CCC-c-cccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhh-CCCcEEEEcc
Confidence 111 2 45689999999999753 23444567899999999999998886 4444 44444
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.40 E-value=0.00027 Score=57.87 Aligned_cols=117 Identities=9% Similarity=0.076 Sum_probs=71.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
++++|.|.|+ |++|..++..|+..+. +..|+++.+.+.... -...++..... ........
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~-~~elvL~D~~~~~~~---g~a~Dl~~a~~---------------~~~~~~~~ 63 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKDRTK---GDALDLEDAQA---------------FTAPKKIY 63 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHH---HHHHHHHGGGG---------------GSCCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEeecccchhH---HHHHHHhcccc---------------ccCCceEe
Confidence 3679999995 9999999999998863 457788877532111 00001111000 01223444
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
.+|.. .++++|+|+.+|+...- .....+.+..|+.-.+.+.+..++. +.+.++.+-|
T Consensus 64 ~~d~~--------------~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt 121 (146)
T d1ez4a1 64 SGEYS--------------DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA 121 (146)
T ss_dssp ECCGG--------------GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred eccHH--------------HhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence 55422 23789999999986543 3445567889999999999998887 6666665554
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.00021 Score=58.48 Aligned_cols=39 Identities=5% Similarity=0.200 Sum_probs=31.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecCCC
Q 037479 13 KTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAADA 51 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~~~ 51 (492)
|+|.|.||||++|+.+++.|++. .+.+..++++.+++..
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~ 41 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG 41 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccc
Confidence 58999999999999999998864 3456678877766543
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.29 E-value=0.0021 Score=52.96 Aligned_cols=111 Identities=14% Similarity=0.020 Sum_probs=65.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCC----eEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVK----KLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~----~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.++|.|+||+|++|++++..|..... +. -..-+.-........+....++. ......+
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----------------~~~~~~~ 65 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEM-LGKDQPVILQLLEIPQAMKALEGVVMELE-----------------DCAFPLL 65 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTT-TCTTCCEEEEEECCGGGHHHHHHHHHHHH-----------------TTTCTTE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccc-cccccchhHhHhccccchhhHcCchhhhh-----------------ccccccc
Confidence 46999999999999999999987432 11 11122222222111111110010 0011223
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
..+...-. ....++++|+||-+||..+- .++..+.++.|+.-.+.+.+...+.
T Consensus 66 ~~~~~~~~-----------~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~ 119 (154)
T d1y7ta1 66 AGLEATDD-----------PKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119 (154)
T ss_dssp EEEEEESC-----------HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCc-----------hhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333211 12666899999999997643 3456678899999999999998885
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.18 E-value=0.0015 Score=55.02 Aligned_cols=111 Identities=16% Similarity=0.075 Sum_probs=67.5
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhC---CC-CCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCc
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQ---PN-VKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEK 86 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g---~~-V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 86 (492)
+..+|.||||+|.+|++++-.|++.. .+ .-.++++..++... ..+-+.-++.... ...
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~-~l~g~~mdl~d~a-----------------~~~ 84 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQ-ALEGVAMELEDSL-----------------YPL 84 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHH-HHHHHHHHHHTTT-----------------CTT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccc-hhcchhhhhcccc-----------------ccc
Confidence 34589999999999999999887632 11 11444444443211 1111111111110 011
Q ss_pred eEE-EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 87 ITL-VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 87 v~~-v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
+.. +.++ + ....++++|+||-+||..+- .+...+.++.|..-.+.+.+.+.+.
T Consensus 85 ~~~~~~~~-----------~-~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 85 LREVSIGI-----------D-PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 139 (175)
T ss_dssp EEEEEEES-----------C-HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCccccc-----------c-chhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 121 1121 1 12666899999999987643 4567788999999999999999885
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.10 E-value=0.0019 Score=52.28 Aligned_cols=114 Identities=11% Similarity=-0.047 Sum_probs=72.0
Q ss_pred EEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEecC
Q 037479 14 TILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPGD 93 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~gD 93 (492)
+|.|+||+|.+|+.++..|+.++. +..+.++....+... .+.+.+ ++-+ -.+ ...+..+..+|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l-~~el~L~Di~~~~~~----~~g~a~--Dl~~----~~~------~~~~~~i~~~~ 64 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKEDD----TVGQAA--DTNH----GIA------YDSNTRVRQGG 64 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGHHH----HHHHHH--HHHH----HHT------TTCCCEEEECC
T ss_pred eEEEECCCCcHHHHHHHHHHhCCC-CCEEEEEecCCcccc----cceeec--chhh----ccc------ccCCceEeeCC
Confidence 799999999999999999988753 467777765432111 110111 1111 000 11333444444
Q ss_pred CCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 94 ITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 94 l~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.. .++++|+|+-+||..+-. +...+.++.|..-.+.+.+..++. +.+.++.
T Consensus 65 ~~--------------~~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i~i 116 (142)
T d1o6za1 65 YE--------------DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISL 116 (142)
T ss_dssp GG--------------GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEE
T ss_pred HH--------------HhhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc-CCCceEE
Confidence 22 237899999999965433 456678999999999999999887 4454443
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.10 E-value=0.0032 Score=50.90 Aligned_cols=114 Identities=18% Similarity=0.113 Sum_probs=69.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
++|.|+|| |.+|+.++-.|+..+ -+..+.++.+.+.....+. + ++..... ...+.....+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~L~D~~~~~~~g~a-~--Dl~~~~~---------------~~~~~~~~~~ 61 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQ-TANELVLIDVFKEKAIGEA-M--DINHGLP---------------FMGQMSLYAG 61 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT-CSSEEEEECCC---CCHHH-H--HHTTSCC---------------CTTCEEEC--
T ss_pred CeEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeccCCccceee-e--eeccCcc---------------cCCCeeEeeC
Confidence 57889997 999999999998876 4678888887765433211 1 1211100 0123333333
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vS 161 (492)
|. ..++++|+|+-+|+..+- .+.....+..|+.-.+.+++.++++ +.+.++.+-
T Consensus 62 ~~--------------~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~-~p~ai~ivv 116 (142)
T d1y6ja1 62 DY--------------SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 116 (142)
T ss_dssp CG--------------GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred cH--------------HHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhcc-CCCceEEEe
Confidence 21 334789999999986543 3455677899999999999988886 445544433
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.07 E-value=0.0008 Score=53.95 Aligned_cols=72 Identities=15% Similarity=0.221 Sum_probs=50.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|+|.|+ |.+|+.+++.|.+.|++| .++.+++. ..+++. ++ -++..+.|
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v---~vid~d~~---~~~~~~-------------~~----------~~~~vi~G 50 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDI---VLIDIDKD---ICKKAS-------------AE----------IDALVING 50 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEE---EEEESCHH---HHHHHH-------------HH----------CSSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCc---ceecCChh---hhhhhh-------------hh----------hhhhhccC
Confidence 68999997 999999999999999754 66655321 122221 11 25678999
Q ss_pred CCCCCCCCCCchhhHHHh-ccCccEEEEcc
Q 037479 93 DITREDLGVKDSNLREEM-WNKLDVVINLA 121 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~-~~~vd~Vih~A 121 (492)
|.+ +.+.++.+ ++++|.++-+.
T Consensus 51 d~~-------~~~~l~~~~i~~a~~vv~~t 73 (132)
T d1lssa_ 51 DCT-------KIKTLEDAGIEDADMYIAVT 73 (132)
T ss_dssp CTT-------SHHHHHHTTTTTCSEEEECC
T ss_pred ccc-------chhhhhhcChhhhhhhcccC
Confidence 999 55555444 46889888653
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.04 E-value=0.0012 Score=53.62 Aligned_cols=37 Identities=5% Similarity=0.232 Sum_probs=28.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhh-CCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRV-QPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~-g~~V~~i~~lvR~~ 49 (492)
|+|.|.||||++|+.|++.|++. .+.+..++.+..+.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~ 38 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ 38 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSC
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccc
Confidence 68999999999999999998864 24555776665443
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.03 E-value=0.0044 Score=50.11 Aligned_cols=116 Identities=17% Similarity=0.057 Sum_probs=72.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+|| |.+|+.++..|+..+. +..+.++.+.+....... + ++.....+. ..+..+...
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l-~~el~L~Di~~~~~~~~~-~--d~~~~~~~~--------------~~~~~i~~~ 61 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGIPQGKA-L--DMYESGPVG--------------LFDTKVTGS 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSHHHHHH-H--HHHTTHHHH--------------TCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CceEEEeccccccchhhh-h--hhhcccchh--------------cccceEEec
Confidence 68999996 9999999999988753 567888876654322111 0 111111111 122333221
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccC-cchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTN-FDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVS 161 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vS 161 (492)
+ + . +.++++|+|+-+||..+ ..+.-...++.|..-.+.+++..++. +.+.++.+-
T Consensus 62 ~---------~---~-~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~-~p~aivivv 117 (142)
T d1guza1 62 N---------D---Y-ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVV 117 (142)
T ss_dssp S---------C---G-GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEEC
T ss_pred C---------C---H-HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc-CCCeEEEEe
Confidence 1 1 1 34589999999999653 33445667889999999999888876 445555443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.95 E-value=0.0011 Score=54.18 Aligned_cols=116 Identities=16% Similarity=0.196 Sum_probs=72.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
.+++|.|+|| |.+|+.++..|+..+. +..|.++.+.+.. .+.+.+ ++ ..- ..+....+...
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l-~~el~L~Di~~~~------~~g~a~--Dl----~~~-----~~~~~~~~~~~ 65 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESK------AIGDAM--DF----NHG-----KVFAPKPVDIW 65 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH------HHHHHH--HH----HHH-----TTSSSSCCEEE
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEeecccc------ccchhc--cH----hhC-----ccccCCCeEEE
Confidence 3679999997 9999999999998864 5678887764321 111111 01 000 01112334444
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
.+|. +.++++|+|+.+|+..+- .+...+.+..|+.-.+.+.+..+++ +.+.++.+
T Consensus 66 ~~d~--------------~~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~~iv 121 (148)
T d1ldna1 66 HGDY--------------DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLV 121 (148)
T ss_dssp ECCG--------------GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEE
T ss_pred ECCH--------------HHhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhh-CCCceEEE
Confidence 4432 334789999999987543 2334556788999999999888876 44544443
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.94 E-value=0.00048 Score=56.19 Aligned_cols=37 Identities=27% Similarity=0.295 Sum_probs=29.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.++|.|.||||++|..|++-|.+..+...++..+..+
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~ 38 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA 38 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence 5799999999999999999887655555567666543
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.80 E-value=0.0023 Score=52.63 Aligned_cols=119 Identities=13% Similarity=0.060 Sum_probs=71.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV 90 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v 90 (492)
+.++|.|.|| |.+|+.++..|...+. ..+.++...+..... ...++.... ..........
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~~--~el~L~D~~~~~~~g---~a~Dl~~~~--------------~~~~~~~~~~ 65 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALREL--ADVVLYDVVKGMPEG---KALDLSHVT--------------SVVDTNVSVR 65 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSSSHHHH---HHHHHHHHH--------------HHTTCCCCEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCC--ceEEEEEeccccchh---HHHHHhhhc--------------cccCCeeEEe
Confidence 4579999997 9999999988877663 577776654432111 110111000 0000111111
Q ss_pred ecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc------hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 91 PGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD------ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 91 ~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
+ ....+..+++.|+|+-+|+..+-. ..-...+..|+.-.+.+++.++++ +.+.++.+-|
T Consensus 66 -~-----------~~~~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiviivs 130 (154)
T d1pzga1 66 -A-----------EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVVT 130 (154)
T ss_dssp -E-----------ECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred -c-----------cCchhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence 1 111235568999999999875432 123456888999999999999887 5566666554
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.77 E-value=0.0041 Score=50.27 Aligned_cols=114 Identities=13% Similarity=0.086 Sum_probs=71.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
.+|.|+|+ |.+|++++..|+.++. +..+.++.+.+..... +.+ ++.....| . .......+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l-~~ElvL~D~~~~~~~g-~a~--Dl~~a~~~--------------~-~~~~i~~~ 61 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKERVEA-EVL--DMQHGSSF--------------Y-PTVSIDGS 61 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHHHH-HHH--HHHHTGGG--------------S-TTCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEeccccchh-HHH--HHHhcccc--------------C-CCceeecC
Confidence 47899996 9999999999988764 5677777665322111 111 11111111 1 12222222
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
+ + . +.++++|+|+-+||..+- .+...+.++.|..-.+.+....++. +.+.++.+
T Consensus 62 ~-----------~-~-~~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~iv 116 (143)
T d1llda1 62 D-----------D-P-EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 116 (143)
T ss_dssp S-----------C-G-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred C-----------C-H-HHhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhh-CCCeEEEE
Confidence 1 1 2 335789999999997653 3455678899999999999988887 55554443
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.75 E-value=0.004 Score=50.22 Aligned_cols=115 Identities=20% Similarity=0.151 Sum_probs=72.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|.|| |.+|+.++..|+.++. +..+.++.+.+. +.+.+.+ +..+ -. . ...+.....+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~Di~~~------~~~g~~~--Dl~~----~~-----~-~~~~~~~~~~ 60 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKK------RAEGDAL--DLIH----GT-----P-FTRRANIYAG 60 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH------HHHHHHH--HHHH----HG-----G-GSCCCEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEecccc------cccchhc--cccc----cc-----c-ccccccccCC
Confidence 68999996 9999999998888764 567888776532 2211111 0100 00 0 1123343343
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
|. +.++++|+|+-+|+..+- ...-.+.+..|..-.+.+.+..++. +.+.++.+-|
T Consensus 61 ~~--------------~~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~-~p~aivivvt 116 (140)
T d1a5za1 61 DY--------------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVVT 116 (140)
T ss_dssp CG--------------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred cH--------------HHhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhc-CCCcEEEEeC
Confidence 32 234789999999997543 3445667888999999999988886 5555555543
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.69 E-value=0.0022 Score=52.80 Aligned_cols=111 Identities=23% Similarity=0.065 Sum_probs=63.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCC----CCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQP----NVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~----~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
.++|.|+||+|.+|++++-.|+..+. .+..++++... +.....+.+..++... .....
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~-~~~~~~~~l~~~~~~~-----------------~~~~~ 64 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT-PMMGVLDGVLMELQDC-----------------ALPLL 64 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCG-GGHHHHHHHHHHHHHT-----------------CCTTE
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCc-cchhhhhhhhhhhccc-----------------ccccc
Confidence 57999999999999999999876431 12123333222 2211122211111100 01122
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhc
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKC 151 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (492)
..+.+ + .. ..+.++++|+||-+||..+-. +...+.++.|..-.+.+.+...+.
T Consensus 65 ~~~~~--~-------~~--~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 65 KDVIA--T-------DK--EEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp EEEEE--E-------SC--HHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred ccccc--C-------cc--cccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 22221 1 11 125668999999999975432 344566889999999998887664
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.63 E-value=0.0013 Score=57.83 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=52.2
Q ss_pred cCCCEEEEeCC----------------cchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHH
Q 037479 10 LENKTILVTGA----------------TGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKE 73 (492)
Q Consensus 10 ~~~~~vlITGa----------------tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~ 73 (492)
++|++||||+| ||-+|.+|++.+.+.|.+| .++..+.....
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V---~li~g~~~~~~-------------------- 60 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANV---TLVSGPVSLPT-------------------- 60 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEE---EEEECSCCCCC--------------------
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCch---hhhhcccccCc--------------------
Confidence 67999999976 6899999999999999765 45444332211
Q ss_pred hcCCchhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc
Q 037479 74 KNGTHLNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD 127 (492)
Q Consensus 74 ~~~~~~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~ 127 (492)
...+..+...-.+. -.+.....+++.|++|++||...|.
T Consensus 61 ----------p~~~~~~~~~t~~~-----m~~~~~~~~~~~D~~i~aAAvsDf~ 99 (223)
T d1u7za_ 61 ----------PPFVKRVDVMTALE-----MEAAVNASVQQQNIFIGCAAVADYR 99 (223)
T ss_dssp ----------CTTEEEEECCSHHH-----HHHHHHHHGGGCSEEEECCBCCSEE
T ss_pred ----------ccccccceehhhHH-----HHHHHHhhhccceeEeeeechhhhh
Confidence 13344444321110 1122234557899999999988774
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.60 E-value=0.0011 Score=55.71 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=30.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
+.|+|+|.|| |++|+.+++.|.+.|+ +|++..|+..
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g~---~V~v~dr~~~ 36 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSGI---KVTVACRTLE 36 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTTC---EEEEEESCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEECChH
Confidence 4689999986 9999999999999996 4588888753
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.46 E-value=0.0042 Score=52.53 Aligned_cols=85 Identities=18% Similarity=0.196 Sum_probs=56.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
.++++|+|.|+ |..|+.++..|.+.|. +.|++..|........+.+ ++++... -....
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~--~~i~i~nR~~~~~~~~~~l---------~~~~~~~----------~~~~~ 73 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGL--KEIKLFNRRDEFFDKALAF---------AQRVNEN----------TDCVV 73 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTHHHHHHH---------HHHHHHH----------SSCEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCC--ceEeeeccchHHHHHHHHH---------HHHHHhh----------cCcce
Confidence 57899999996 7889999999999764 7899999976653322221 1222222 12234
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAAT 123 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~ 123 (492)
...|+. +.+.....+.++|+|||+...
T Consensus 74 ~~~~~~-------~~~~~~~~~~~~diiIN~Tp~ 100 (182)
T d1vi2a1 74 TVTDLA-------DQQAFAEALASADILTNGTKV 100 (182)
T ss_dssp EEEETT-------CHHHHHHHHHTCSEEEECSST
T ss_pred Eeeecc-------cccchhhhhcccceeccccCC
Confidence 455666 434344666789999999764
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.42 E-value=0.0048 Score=50.07 Aligned_cols=116 Identities=14% Similarity=0.134 Sum_probs=69.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|+|.|+|+ |.+|..++-.|+..|. +..+.+..+.+. +.+.+.+ ++.+.. .+.........+
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~------~~~g~~~--Dl~~a~---------~~~~~~~~~~~~ 62 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGV-ADDYVFIDANEA------KVKADQI--DFQDAM---------ANLEAHGNIVIN 62 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHH------HHHHHHH--HHHHHG---------GGSSSCCEEEES
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEecccc------hhhhHHH--hhhccc---------cccCCccceecc
Confidence 78999995 9999999999998763 456777665432 2211111 111100 011123333444
Q ss_pred CCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-----hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 93 DITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-----ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
|. +.++++|+||-+||..+.. ..-.+.++.|+.-.+.+.+..++. +.+.++.+-|
T Consensus 63 d~--------------~~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aivivvt 122 (146)
T d1hyha1 63 DW--------------AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVVIS 122 (146)
T ss_dssp CG--------------GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred CH--------------HHhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEec
Confidence 32 2348899999999975421 112345778999999999988887 5555555443
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.27 E-value=0.012 Score=47.27 Aligned_cols=116 Identities=16% Similarity=0.027 Sum_probs=71.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe-
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP- 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~- 91 (492)
|+|.|.|+ |.+|+.++..|+.++ -+..+.++.+.++ +.+.+.+ | |..-. .+.........
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~------~~~g~al-----D-l~~~~-----~~~~~~~~i~~~ 61 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAED------LAVGEAM-----D-LAHAA-----AGIDKYPKIVGG 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHH------HHHHHHH-----H-HHHHH-----HTTTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcC-cCceEEEEecccc------hhhHHHH-----H-Hhhhc-----cccCCCCccccC
Confidence 68999996 999999999888776 4567787765432 1111111 1 00000 00111122221
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc-chhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF-DERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
+| . +.++++|+|+-.|+..+- .....+.+..|..-.+.+.+..++. +.+.++.+-|
T Consensus 62 ~d-------------~-~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aivivvt 118 (142)
T d1ojua1 62 AD-------------Y-SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (142)
T ss_dssp SC-------------G-GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred CC-------------H-HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh-CCCcEEEEec
Confidence 22 2 345889999999986543 3445667888999999999998887 4455555443
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.27 E-value=0.012 Score=47.94 Aligned_cols=117 Identities=16% Similarity=0.112 Sum_probs=70.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+.+|-|.|+ |.+|+.++..|+..+ +..+.++.+.++... -...++.....|. ..+.....
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~--l~el~L~Di~~~~~~---g~a~Dl~~~~~~~--------------~~~~~v~~ 62 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKN--LGDVVLFDIVKNMPH---GKALDTSHTNVMA--------------YSNCKVSG 62 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECSSSSHHH---HHHHHHHTHHHHH--------------TCCCCEEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEEeccCCcce---eeecchhhhcccc--------------CCCcEEEe
Confidence 468999995 999999998777654 568887777543211 1111222211111 12222222
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc------hhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD------ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~------~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
.+ + . ..++++|+|+-+|+..+.. ..-...++.|..-.+.+++..++. +.+.++.+-|
T Consensus 63 ~~---------~---~-~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~-~p~aivivvt 125 (150)
T d1t2da1 63 SN---------T---Y-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIVVT 125 (150)
T ss_dssp EC---------C---G-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECS
T ss_pred cc---------c---c-cccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc-CCCeEEEEec
Confidence 21 1 1 3447899999999965432 113456888999999999988887 5555555443
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.14 E-value=0.0018 Score=54.85 Aligned_cols=36 Identities=25% Similarity=0.381 Sum_probs=28.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
++|.|.|||||+|..|++-|.+. |++.-.++..++.
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~H-P~~ei~~l~~~s~ 37 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNRH-PHMTITALTVSAQ 37 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEETT
T ss_pred cEEEEECcccHHHHHHHHHHHhC-CCCceEeeEeecc
Confidence 68999999999999999977764 6775445555553
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.12 E-value=0.021 Score=45.91 Aligned_cols=115 Identities=10% Similarity=0.098 Sum_probs=66.6
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEE-e
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLV-P 91 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v-~ 91 (492)
++|.|+|+ |.+|+.++-.|+..+- ..+.++...+..... +.+ ++.....+. .....+. .
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l--~dl~l~D~~~~~~~~-~~~--Dl~~~~~~~--------------~~~~~i~~~ 61 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKEL--GDIVLLDIVEGVPQG-KAL--DLYEASPIE--------------GFDVRVTGT 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSSSSHHHH-HHH--HHHTTHHHH--------------TCCCCEEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCc--ceEEEEeeccccchh-HHH--Hhhcccccc--------------CCCCEEEec
Confidence 68999996 9999999998887653 567777654432111 111 222221111 1122222 2
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccC-cchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEeee
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTN-FDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHVST 162 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~vST 162 (492)
+|. ..+++.|+|+-+||..+ ......+.++.|+.-.+.+++...+. +.+.++.+-|
T Consensus 62 ~d~--------------~~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~-~p~aivivvt 118 (142)
T d1uxja1 62 NNY--------------ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVN 118 (142)
T ss_dssp SCG--------------GGGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGG-CTTCEEEECS
T ss_pred CcH--------------HHhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc-CCCceEEEeC
Confidence 221 23478999999999754 33445567889999999999988886 5555555543
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.10 E-value=0.013 Score=48.01 Aligned_cols=119 Identities=17% Similarity=0.113 Sum_probs=73.6
Q ss_pred hcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceE
Q 037479 9 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKIT 88 (492)
Q Consensus 9 ~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~ 88 (492)
....++|-|.|+ |.+|..++-.|+..|. +..+.+..+.++.... +-+ ++..... +......
T Consensus 17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l-~~ElvLiD~~~~~a~g-~al--Dl~h~~~--------------~~~~~~~ 77 (160)
T d1i0za1 17 TVPNNKITVVGV-GQVGMACAISILGKSL-ADELALVDVLEDKLKG-EMM--DLQHGSL--------------FLQTPKI 77 (160)
T ss_dssp CCCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHH-HHH--HHHHTGG--------------GCCCSEE
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEeccchhHH-HHH--HHhcccc--------------ccCCCeE
Confidence 355689999996 9999999999998764 4677777664321111 000 1111111 1112222
Q ss_pred EEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhccccee-EEEee
Q 037479 89 LVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIV-LVHVS 161 (492)
Q Consensus 89 ~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~-~V~vS 161 (492)
...+|. ..+++.|+|+.+||..+-. +...+.++.|+.-.+.++...++. +.+. ++.+|
T Consensus 78 ~~~~d~--------------~~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~-~p~aiiivvt 137 (160)
T d1i0za1 78 VADKDY--------------SVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCIIIVVS 137 (160)
T ss_dssp EECSSG--------------GGGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred Eeccch--------------hhcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeC
Confidence 233332 3347899999999976432 344566888999999999988886 4444 44444
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.05 E-value=0.0024 Score=54.22 Aligned_cols=42 Identities=19% Similarity=0.278 Sum_probs=30.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKS 53 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~ 53 (492)
++.+|.|.||||++|..|++-|.+. |.+.-+++.+++..++.
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~S~~~aG~~ 45 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMTADRKAGEQ 45 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECSTTTTSC
T ss_pred CccEEEEECcccHHHHHHHHHHHhC-CCceEEEEeccccCCCc
Confidence 4568999999999999999988875 77754444445444443
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=95.86 E-value=0.006 Score=51.08 Aligned_cols=39 Identities=28% Similarity=0.352 Sum_probs=29.5
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCc
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAK 52 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~ 52 (492)
++|.|.||||++|..|++.|.+ -+++.-+++..|+..++
T Consensus 2 ikVaIvGATGyvG~eLirlL~~-HP~~ei~~l~s~~~aG~ 40 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKN-HPEAKITYLSSRTYAGK 40 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHH-CTTEEEEEEECSTTTTS
T ss_pred eEEEEECCCcHHHHHHHHHHHh-CCCceEEEeeccccCCC
Confidence 5899999999999999997776 47775555555554443
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.85 E-value=0.0022 Score=54.57 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=29.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
|+|.|+||+|.+|+.|++.|++.|++| .+..|++
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V---~l~~R~~ 34 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEI---VVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEE---EEEESSH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEE---EEEECCH
Confidence 689999999999999999999999754 7778854
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=95.79 E-value=0.0056 Score=51.69 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=31.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-+|.+|||+||+|-+|...++-....|. +|++.+|++
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga---~vi~~~~~~ 64 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKGC---KVVGAAGSD 64 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccCC---EEEEeCCCH
Confidence 3578999999999999999998887774 668888864
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=95.69 E-value=0.0049 Score=49.09 Aligned_cols=72 Identities=18% Similarity=0.156 Sum_probs=47.3
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|++.|.|+ |-+|+.+++.|.+.|++| .++..++ ++++ ++ .......+.|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~v---vvid~d~------~~~~-~~--------------------~~~~~~~~~g 49 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEV---LAVDINE------EKVN-AY--------------------ASYATHAVIA 49 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCC---EEEESCH------HHHH-HT--------------------TTTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeE---EEecCcH------HHHH-HH--------------------HHhCCcceee
Confidence 56888875 999999999999999876 5554432 2221 01 1244567889
Q ss_pred CCCCCCCCCCchhhHHHh-ccCccEEEEccc
Q 037479 93 DITREDLGVKDSNLREEM-WNKLDVVINLAA 122 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~~~-~~~vd~Vih~Aa 122 (492)
|.++ ++.++.+ ++++|.||=+..
T Consensus 50 d~~~-------~~~l~~a~i~~a~~vi~~~~ 73 (134)
T d2hmva1 50 NATE-------ENELLSLGIRNFEYVIVAIG 73 (134)
T ss_dssp CTTC-------TTHHHHHTGGGCSEEEECCC
T ss_pred eccc-------chhhhccCCccccEEEEEcC
Confidence 9994 4444343 578998875543
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.65 E-value=0.006 Score=51.24 Aligned_cols=38 Identities=24% Similarity=0.216 Sum_probs=31.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCc
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAK 52 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~ 52 (492)
|.+|||+||+|-+|...++-....|. +|++.+++++..
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~Ga---~Viat~~s~~k~ 69 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKRGY---TVEASTGKAAEH 69 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCTTCH
T ss_pred CCEEEEEeccchHHHHHHHHHHHcCC---ceEEecCchHHH
Confidence 67899999999999999998877785 458888876653
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.57 E-value=0.0041 Score=44.32 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=31.7
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
++.+|||+||+|-+|...+.-+...|. +|++.++++++
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~---~Vi~~t~s~~k 68 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGY---QVVAVSGREST 68 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCGGG
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCC---eEEEEECCHHH
Confidence 578999999999999999998787786 45888887654
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=95.43 E-value=0.011 Score=49.33 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=30.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.|.+|||+||+|-+|...+.-+...|. +|++.+++++
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~---~vi~~~~~~~ 63 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAASRPE 63 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCEEEEEeccccchhhhhhhhccccc---cccccccccc
Confidence 578999999999999999988877774 5688887654
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.39 E-value=0.0053 Score=50.35 Aligned_cols=36 Identities=22% Similarity=0.307 Sum_probs=26.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
|=+|.|.||||++|..|++.|.+..+.+..+..+..
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s 36 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS 36 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecc
Confidence 348999999999999999877665434556666543
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=95.33 E-value=0.0094 Score=49.06 Aligned_cols=37 Identities=27% Similarity=0.417 Sum_probs=32.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+++++|||.|+ |-+|+.+++.|...|. ++|++..|+.
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~--~~i~v~nRt~ 58 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY 58 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCC--cEEEEEcCcH
Confidence 57899999997 9999999999999875 6778888863
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=95.29 E-value=0.0055 Score=51.01 Aligned_cols=38 Identities=26% Similarity=0.247 Sum_probs=31.8
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCc
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAK 52 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~ 52 (492)
+.+|||+||+|-+|...++-....|. +|+..+|++...
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga---~Viat~~s~~k~ 61 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGY---DVVASTGNREAA 61 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTC---CEEEEESSSSTH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCC---ceEEEecCHHHH
Confidence 55899999999999999988877885 558999986653
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.25 E-value=0.013 Score=48.17 Aligned_cols=116 Identities=16% Similarity=0.029 Sum_probs=68.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++..+|.|+|+ |.+|..++..|+..+. +..+.++.+.+... +-...++..... +.......
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l-~~elvL~D~~~~~a---~g~alDl~~~~~--------------~~~~~~~~ 77 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGL-ADELALVDADTDKL---RGEALDLQHGSL--------------FLSTPKIV 77 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTS-CSEEEEECSCHHHH---HHHHHHHHHTTT--------------TCSCCEEE
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCchhh---hccHHHHhCcch--------------hcCCCeEE
Confidence 45568999996 9999999999988764 55777776543211 110001211111 11122222
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcc-hhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFD-ERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
..+|. ..++++|+|+-+||..+-. +...+.++.|+.-.+.+....++. +.+.++.
T Consensus 78 ~~~d~--------------~~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~-~p~~ivi 133 (159)
T d2ldxa1 78 FGKDY--------------NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN-SPDCKII 133 (159)
T ss_dssp EESSG--------------GGGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH-STTCEEE
T ss_pred eccch--------------hhhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCeEEE
Confidence 22321 3337899999999875432 333455788888888888877776 4444433
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=95.09 E-value=0.045 Score=40.20 Aligned_cols=37 Identities=14% Similarity=0.183 Sum_probs=30.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
|+||+|+|.|. |--|..+++.|.+.|.+| ++......
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v---~~~D~~~~ 39 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTP---RVMDTRMT 39 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCC---EEEESSSS
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCCEE---EEeeCCcC
Confidence 68999999996 668999999999999776 66655443
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.59 E-value=0.016 Score=48.69 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=30.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+|.+|||+||+|-+|...+.-+...|. ++++.++++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~---~vi~~~~~~ 60 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGA---RIYTTAGSD 60 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCEEEEECCCCCcccccchhhccccc---cceeeeccc
Confidence 478999999999999999998888885 557877754
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.57 E-value=0.021 Score=47.46 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=30.1
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+|.+|||+||+|-+|...++-+...|. +|+++++++
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~---~vi~~~~~~ 63 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGL---KILGTAGTE 63 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEEeccccccccccccccccCc---ccccccccc
Confidence 578999999999999999988877774 568888753
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=94.07 E-value=0.039 Score=44.58 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=28.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
-++|.|.||.|.+|+.++..|.+.|++| .+..|
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V---~~~d~ 41 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASGYPI---SILDR 41 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCE---EEECT
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHcCCCc---Eeccc
Confidence 4799999999999999999999999876 45444
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=93.99 E-value=0.041 Score=45.74 Aligned_cols=37 Identities=19% Similarity=0.144 Sum_probs=31.4
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.|.+|+|+||+|-+|..+++-....|. +|++.+++..
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga---~Vi~~~~s~~ 64 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGA---KLIGTVGTAQ 64 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTC---EEEEEESSHH
T ss_pred CCCEEEEEccccccchHHHHHHHHhCC---eEeecccchH
Confidence 478999999999999999998888884 6688888754
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=93.47 E-value=0.06 Score=44.09 Aligned_cols=37 Identities=22% Similarity=0.313 Sum_probs=27.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
..+|.|.|++|-+|+.+++.+++. .++.-+.++.|+.
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~-~~~~lv~~~~~~~ 40 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREG 40 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEeccc
Confidence 468999999999999999999875 2333334445544
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=93.16 E-value=0.045 Score=45.72 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=29.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.|.+|||+|| |-+|...+.-+...|. ++|++..+++
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga--~~Vi~~~~~~ 63 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGA--ENVIVIAGSP 63 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTB--SEEEEEESCH
T ss_pred CCCCEEEEECC-Cccchhheeccccccc--cccccccccc
Confidence 35789999996 8899998888877775 4778887754
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.97 E-value=0.39 Score=37.27 Aligned_cols=38 Identities=24% Similarity=0.230 Sum_probs=30.2
Q ss_pred HhhcCCCEEEEeCCc---chhhHHHHHHHHhhCCCCCeEEEEE
Q 037479 7 LEFLENKTILVTGAT---GFLAKIFVEKILRVQPNVKKLYLLL 46 (492)
Q Consensus 7 ~~~~~~~~vlITGat---GflG~~l~~~Ll~~g~~V~~i~~lv 46 (492)
..||+.++|.|.||| |-.|..+++.|.+.| -.+||.+.
T Consensus 3 ~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~--~g~v~pVn 43 (129)
T d2csua1 3 DYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVN 43 (129)
T ss_dssp CTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEEC
T ss_pred hHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcC--CCcEEEec
Confidence 358899999999999 999999999987644 24666653
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=92.83 E-value=0.16 Score=40.74 Aligned_cols=38 Identities=24% Similarity=0.291 Sum_probs=29.6
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.|+|.|.|+||-||+..++-+.+ .++--+|.+++-.++
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~-~~d~f~v~~lsa~~N 39 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIER-NLDRYQVIALTANRN 39 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-TGGGEEEEEEEESSC
T ss_pred CcEEEEECCCcHHHHHHHHHHHc-CCCCcEEEEEEeCCC
Confidence 58999999999999999997765 344347788876554
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=92.83 E-value=0.09 Score=43.14 Aligned_cols=37 Identities=27% Similarity=0.219 Sum_probs=29.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.+.+|+|+||+|-+|...+..+...|. .+|++..+++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~--~~V~~~~~~~ 63 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVRE 63 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSH
T ss_pred CCCEEEEEeccccceeeeeeccccccc--ccccccccch
Confidence 467999999999999988888877775 4667776653
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=92.69 E-value=0.038 Score=45.21 Aligned_cols=35 Identities=23% Similarity=0.352 Sum_probs=30.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
|+|+|.|+ |-+|..+...|.+.|++| .++.|.+..
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V---~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEV---QGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEE---EEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCce---EEEEcCHHH
Confidence 79999997 999999999999999754 888887653
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=92.57 E-value=0.093 Score=43.45 Aligned_cols=34 Identities=24% Similarity=0.112 Sum_probs=29.0
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|+|.|.|| |-+|..++..|.+.|++| .+..|++
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V---~~~~r~~ 34 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSV---LAWDIDA 34 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEE---EEECSCH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEE---EEEECCH
Confidence 379999995 999999999999999754 7888853
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=92.51 E-value=0.49 Score=41.15 Aligned_cols=127 Identities=20% Similarity=0.145 Sum_probs=71.1
Q ss_pred HhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcChh----hHHHHHhcCCch
Q 037479 7 LEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKDL----FRVLKEKNGTHL 79 (492)
Q Consensus 7 ~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~~----f~~l~~~~~~~~ 79 (492)
++-+++++|+|.| .|-+|++++..|.+.| |+++.++....-..+-..|.. .+-.+.+. -++|++..|
T Consensus 25 Q~kL~~~~VliiG-~GglGs~va~~La~~G--vg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np--- 98 (247)
T d1jw9b_ 25 QEALKDSRVLIVG-LGGLGCAASQYLASAG--VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP--- 98 (247)
T ss_dssp HHHHHHCEEEEEC-CSHHHHHHHHHHHHHT--CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhc---
Confidence 3446778999999 6669999999999988 588888765443333333310 00011111 222333333
Q ss_pred hhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEE
Q 037479 80 NALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVH 159 (492)
Q Consensus 80 ~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~ 159 (492)
.-+++.+...+. ... ......+.|+|+.+... .. ....+-++|.+. + ..+|+
T Consensus 99 ----~~~i~~~~~~~~-------~~~-~~~~~~~~divid~~d~------~~--------~~~~in~~~~~~-~-ip~i~ 150 (247)
T d1jw9b_ 99 ----HIAITPVNALLD-------DAE-LAALIAEHDLVLDCTDN------VA--------VRNQLNAGCFAA-K-VPLVS 150 (247)
T ss_dssp ----TSEEEEECSCCC-------HHH-HHHHHHTSSEEEECCSS------HH--------HHHHHHHHHHHH-T-CCEEE
T ss_pred ----ccchhhhhhhhh-------hcc-ccccccccceeeeccch------hh--------hhhhHHHHHHHh-C-CCccc
Confidence 144555555444 333 33666789999987632 11 112344556665 4 35777
Q ss_pred eeeceeec
Q 037479 160 VSTAFVWG 167 (492)
Q Consensus 160 vST~~v~~ 167 (492)
.+.....|
T Consensus 151 g~~~~~~g 158 (247)
T d1jw9b_ 151 GAAIRMEG 158 (247)
T ss_dssp EEEEBTEE
T ss_pred cccccccc
Confidence 66544443
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.49 E-value=0.18 Score=41.18 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=29.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
-.|.+|+|.|+ |-+|...+..+...|. +|+++.+++..
T Consensus 26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~---~vi~~~~~~~k 63 (168)
T d1piwa2 26 GPGKKVGIVGL-GGIGSMGTLISKAMGA---ETYVISRSSRK 63 (168)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSSTT
T ss_pred CCCCEEEEECC-CCcchhHHHHhhhccc---cccccccchhH
Confidence 35789999996 9999998877766674 56888887654
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=92.43 E-value=0.15 Score=38.67 Aligned_cols=29 Identities=21% Similarity=0.343 Sum_probs=25.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNV 39 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V 39 (492)
++||+|+|.| +|-+|..-++.|++.|.+|
T Consensus 10 l~~k~vlVvG-~G~va~~ka~~ll~~ga~v 38 (113)
T d1pjqa1 10 LRDRDCLIVG-GGDVAERKARLLLEAGARL 38 (113)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTTBEE
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHHCCCeE
Confidence 5789999999 7889999999999998543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.24 E-value=0.029 Score=47.32 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=25.9
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.+|||+||+|-+|...++-....|. .+|+..+++
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga--~~vi~~~~~ 65 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGC--SRVVGICGT 65 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTC--SEEEEEESS
T ss_pred CEEEEECCCchhhHHHHHHHHHcCC--cceecccch
Confidence 7899999999999999987766665 345554443
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=92.11 E-value=0.25 Score=41.39 Aligned_cols=95 Identities=6% Similarity=0.010 Sum_probs=60.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.|++|.|.| .|-||+.+++.|..-|. +|+...|...... .... .+....-++.+-+ ...+..
T Consensus 47 L~gktvgIiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~-~~~~--~~~~~~~l~~ll~----------~sD~i~ 109 (193)
T d1mx3a1 47 IRGETLGIIG-LGRVGQAVALRAKAFGF---NVLFYDPYLSDGV-ERAL--GLQRVSTLQDLLF----------HSDCVT 109 (193)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECTTSCTTH-HHHH--TCEECSSHHHHHH----------HCSEEE
T ss_pred eeCceEEEec-cccccccceeeeecccc---ceeeccCcccccc-hhhh--ccccccchhhccc----------cCCEEE
Confidence 5789999998 99999999999987664 4566666543321 1110 1111111222211 256778
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa 122 (492)
+...++...-++-+.+.+ ..+++--++||+|=
T Consensus 110 ~~~plt~~T~~li~~~~l-~~mk~~a~lIN~sR 141 (193)
T d1mx3a1 110 LHCGLNEHNHHLINDFTV-KQMRQGAFLVNTAR 141 (193)
T ss_dssp ECCCCCTTCTTSBSHHHH-TTSCTTEEEEECSC
T ss_pred EeecccccchhhhhHHHH-hccCCCCeEEecCC
Confidence 888888888888777765 55666678888774
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=92.09 E-value=0.2 Score=40.11 Aligned_cols=75 Identities=16% Similarity=0.301 Sum_probs=49.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
-.|+|.|. |-+|+.+++.|.+.|.+| .++...+.. ..+++. .....++.++.|
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~~~~v---~vId~d~~~--~~~~~~---------------------~~~~~~~~vi~G 56 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQRGQNV---TVISNLPED--DIKQLE---------------------QRLGDNADVIPG 56 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCE---EEEECCCHH--HHHHHH---------------------HHHCTTCEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCE---EEEeccchh--HHHHHH---------------------HhhcCCcEEEEc
Confidence 36888885 899999999999998654 555443221 111111 111367899999
Q ss_pred CCCCCCCCCCchhhH-HHhccCccEEEEcc
Q 037479 93 DITREDLGVKDSNLR-EEMWNKLDVVINLA 121 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~-~~~~~~vd~Vih~A 121 (492)
|.+ +++.+ +.-+++++.||=+.
T Consensus 57 d~~-------d~~~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 57 DSN-------DSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CTT-------SHHHHHHHTTTTCSEEEECS
T ss_pred cCc-------chHHHHHhccccCCEEEEcc
Confidence 999 45544 33456899998665
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=92.04 E-value=0.42 Score=39.76 Aligned_cols=92 Identities=8% Similarity=0.005 Sum_probs=59.1
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
..+++|.|.| .|.+|+.+++.|..-|. +|+...|..+.... ......-++.+-+ ...+..
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~~------~~~~~~~l~ell~----------~sDii~ 101 (188)
T d1sc6a1 42 ARGKKLGIIG-YGHIGTQLGILAESLGM---YVYFYDIENKLPLG------NATQVQHLSDLLN----------MSDVVS 101 (188)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCCCCCT------TCEECSCHHHHHH----------HCSEEE
T ss_pred ccceEEEEee-cccchhhhhhhcccccc---eEeeccccccchhh------hhhhhhhHHHHHh----------hcccee
Confidence 4688999997 99999999998877664 55777665432211 0111111222211 256777
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa 122 (492)
+...++...-++-+.+.+ ..+++=-++||+|=
T Consensus 102 i~~plt~~T~~li~~~~l-~~mk~~a~lIN~aR 133 (188)
T d1sc6a1 102 LHVPENPSTKNMMGAKEI-SLMKPGSLLINASR 133 (188)
T ss_dssp ECCCSSTTTTTCBCHHHH-HHSCTTEEEEECSC
T ss_pred ecccCCcchhhhccHHHH-hhCCCCCEEEEcCc
Confidence 888888888888777766 55566667777763
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=91.43 E-value=0.043 Score=41.53 Aligned_cols=39 Identities=18% Similarity=0.177 Sum_probs=30.4
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
+-|+||+|+|.| +|--|.-++..|.+.+. +++.+.|+..
T Consensus 28 ~~f~gK~VlVVG-~g~Sa~dia~~l~~~ak---~v~~~~~r~~ 66 (107)
T d2gv8a2 28 ELFVGESVLVVG-GASSANDLVRHLTPVAK---HPIYQSLLGG 66 (107)
T ss_dssp GGGTTCCEEEEC-SSHHHHHHHHHHTTTSC---SSEEEECTTC
T ss_pred hhcCCCeEEEEC-CCCCHHHHHHHHHHhcC---EEEEEEecCc
Confidence 458999999999 77899999999987764 4466666543
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.26 E-value=0.47 Score=45.00 Aligned_cols=98 Identities=15% Similarity=0.189 Sum_probs=59.3
Q ss_pred HHhhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHH---HHhhcCh----hhHHHHHhcCCc
Q 037479 6 VLEFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFH---NEIIGKD----LFRVLKEKNGTH 78 (492)
Q Consensus 6 ~~~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~---~~~~~~~----~f~~l~~~~~~~ 78 (492)
++.-+++.+|||.|+.| +|..++..|...|. ++|.++....-..+-..|-. .+=.+.. ..+++++..|
T Consensus 31 ~~~~l~~~kVlvvG~Gg-lG~ei~k~L~~~Gv--g~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np-- 105 (426)
T d1yovb1 31 LQFLLDTCKVLVIGAGG-LGCELLKNLALSGF--RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP-- 105 (426)
T ss_dssp HHHHHHHCCEEEECSST-THHHHHHHHHTTTC--CCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST--
T ss_pred HHHHHhcCeEEEECCCH-HHHHHHHHHHHcCC--CeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCC--
Confidence 44456788999999755 99999999999874 77887766543333222210 0001111 1233444333
Q ss_pred hhhhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEccc
Q 037479 79 LNALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 79 ~~~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa 122 (492)
.-++..+..++. +.. ...+++.|+||.+.-
T Consensus 106 -----~v~i~~~~~~i~-------~~~--~~~~~~~DlVi~~~D 135 (426)
T d1yovb1 106 -----NCNVVPHFNKIQ-------DFN--DTFYRQFHIIVCGLD 135 (426)
T ss_dssp -----TCCCEEECSCGG-------GBC--HHHHTTCSEEEECCS
T ss_pred -----CCceEeeecccc-------chH--HHHHHhcchheeccC
Confidence 246677777776 222 256789999998753
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=91.18 E-value=0.13 Score=40.18 Aligned_cols=25 Identities=8% Similarity=0.037 Sum_probs=21.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQP 37 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~ 37 (492)
|+|.|.|++|-+|+.+.+.+.+.++
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~ 25 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGH 25 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCC
Confidence 6899999999999999887777664
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.05 E-value=0.24 Score=48.55 Aligned_cols=129 Identities=12% Similarity=0.095 Sum_probs=68.9
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHH---HHHhhcCh----hhHHHHHhcCCchh
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRF---HNEIIGKD----LFRVLKEKNGTHLN 80 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~---~~~~~~~~----~f~~l~~~~~~~~~ 80 (492)
+-+++.+|+|.|+ |-+|..+++.|...| |+++.++....-..+-..|- ..+=.+.. .-..|.+-.|.
T Consensus 21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~G--Vg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~--- 94 (529)
T d1yova1 21 EALESAHVCLINA-TATGTEILKNLVLPG--IGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSD--- 94 (529)
T ss_dssp HHHHHCEEEECCC-SHHHHHHHHHHHTTT--CSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTT---
T ss_pred HHHhCCCEEEECC-CHHHHHHHHHHHHhc--CCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCC---
Confidence 4466789999997 569999999999876 58888875433222211110 00000111 11222222221
Q ss_pred hhccCceEEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccCcchhHHHHHHHhHHHHHHHHHHHHhcccceeEEEe
Q 037479 81 ALISEKITLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTNFDERYDVALDLNTFGAKHVLNFSKKCAKLIVLVHV 160 (492)
Q Consensus 81 ~~~~~~v~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~~~V~v 160 (492)
-++..+..+..+ ..+.....+.+.|+||.+.. + ......+-++|++. ++ .||++
T Consensus 95 ----v~i~~~~~~~~~------~~~~~~~~~~~~dvVv~~~~------~--------~~~~~~l~~~c~~~-~i-p~i~~ 148 (529)
T d1yova1 95 ----VSGSFVEESPEN------LLDNDPSFFCRFTVVVATQL------P--------ESTSLRLADVLWNS-QI-PLLIC 148 (529)
T ss_dssp ----SBCCEESSCHHH------HHHSCGGGGGGCSEEEEESC------C--------HHHHHHHHHHHHHH-TC-CEEEE
T ss_pred ----CcEEEEcCCchh------hhhhHHHHhcCCCEEEECCC------C--------HHHHHHHHHHHHHc-CC-CEEEE
Confidence 233444443321 00111144578999997642 1 12223466777775 44 59999
Q ss_pred eeceeecc
Q 037479 161 STAFVWGE 168 (492)
Q Consensus 161 ST~~v~~~ 168 (492)
+|.+.+|.
T Consensus 149 ~~~G~~G~ 156 (529)
T d1yova1 149 RTYGLVGY 156 (529)
T ss_dssp EEETTEEE
T ss_pred eccCCEEE
Confidence 98877775
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=91.00 E-value=0.58 Score=38.07 Aligned_cols=38 Identities=24% Similarity=0.397 Sum_probs=27.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
|++.+|.|.| +|++|+..++.|.+ .+++.-+.+..|+.
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~-~~~~elvav~~~~~ 38 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAK-QPDMDLVGIFSRRA 38 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTT-CSSEEEEEEEESSS
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHh-CCCcEEEEEEeccc
Confidence 4667899999 69999999988876 46664444444443
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=90.84 E-value=0.054 Score=44.37 Aligned_cols=33 Identities=21% Similarity=0.216 Sum_probs=27.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
|+|.|.| +|.+|+.++..|.+.|++ |++..|++
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~---V~~~d~~~ 33 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHY---LIGVSRQQ 33 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCE---EEEECSCH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCE---EEEEECCc
Confidence 6899997 599999999999999974 57777753
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=90.72 E-value=0.51 Score=38.98 Aligned_cols=89 Identities=8% Similarity=0.110 Sum_probs=53.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.|++|.|.| .|-||+.+++.+..-|. +|+...|.++..... . ..-++.+- ....+..
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~g~---~v~~~d~~~~~~~~~------~--~~~l~ell----------~~sDiv~ 97 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAALGA---QVRGFSRTPKEGPWR------F--TNSLEEAL----------REARAAV 97 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHTTC---EEEEECSSCCCSSSC------C--BSCSHHHH----------TTCSEEE
T ss_pred ccCceEEEec-cccccccceeeeecccc---cccccccccccccee------e--eechhhhh----------hccchhh
Confidence 6789999999 88899999999987774 667877765432110 0 00011110 1244555
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLA 121 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~A 121 (492)
+..-+++...++-+.+.+ ..+++--++||+|
T Consensus 98 ~~~pl~~~t~~li~~~~l-~~mk~~ailIN~~ 128 (181)
T d1qp8a1 98 CALPLNKHTRGLVKYQHL-ALMAEDAVFVNVG 128 (181)
T ss_dssp ECCCCSTTTTTCBCHHHH-TTSCTTCEEEECS
T ss_pred ccccccccccccccccee-eeccccceEEecc
Confidence 566666666666555554 4445555666655
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=90.58 E-value=0.35 Score=40.62 Aligned_cols=92 Identities=11% Similarity=0.121 Sum_probs=56.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.|++|.|.| .|-||+.+++.|..-|. +|++..+..+... . .+.....-++.+-+ ...+..
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~fg~---~V~~~d~~~~~~~---~--~~~~~~~~l~~~l~----------~sDii~ 101 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGFGA---KVITYDIFRNPEL---E--KKGYYVDSLDDLYK----------QADVIS 101 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCCHHH---H--HTTCBCSCHHHHHH----------HCSEEE
T ss_pred ccCCeEEEec-ccccchhHHHhHhhhcc---cccccCccccccc---c--cceeeecccccccc----------cccccc
Confidence 5689999999 99999999999977664 4566554432110 0 01111111221111 255677
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLA 121 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~A 121 (492)
+..-++...-++-+.+.+ ..+++--++||+|
T Consensus 102 ~~~plt~~T~~li~~~~l-~~mk~~a~lIN~s 132 (197)
T d1j4aa1 102 LHVPDVPANVHMINDESI-AKMKQDVVIVNVS 132 (197)
T ss_dssp ECSCCCGGGTTCBSHHHH-HHSCTTEEEEECS
T ss_pred ccCCccccccccccHHHH-hhhCCccEEEecC
Confidence 777777777777666665 5556667777776
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=90.55 E-value=0.16 Score=41.46 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=27.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
-.|.+|+|.|+ |-+|...++-+...|. ++++..++.+
T Consensus 29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga---~~i~~~~~~~ 65 (168)
T d1uufa2 29 GPGKKVGVVGI-GGLGHMGIKLAHAMGA---HVVAFTTSEA 65 (168)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSGG
T ss_pred CCCCEEEEecc-chHHHHHHHHhhcccc---cchhhccchh
Confidence 35789999986 8899998877776674 4456666544
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=90.25 E-value=0.46 Score=39.90 Aligned_cols=92 Identities=13% Similarity=0.064 Sum_probs=56.5
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
+.|++|.|.| .|-||+.+++.|..-|. +|++..|....... ......-++.+-+ ...+..
T Consensus 43 l~~ktvgIiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~~------~~~~~~~l~~l~~----------~~D~v~ 102 (199)
T d1dxya1 43 LGQQTVGVMG-TGHIGQVAIKLFKGFGA---KVIAYDPYPMKGDH------PDFDYVSLEDLFK----------QSDVID 102 (199)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCCSSCC------TTCEECCHHHHHH----------HCSEEE
T ss_pred ccceeeeeee-cccccccccccccccce---eeeccCCccchhhh------cchhHHHHHHHHH----------hcccce
Confidence 4579999999 99999999999987664 55777665432211 0001111111111 255666
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa 122 (492)
+..-++...-++-+.+.+ ..+++--++||+|=
T Consensus 103 ~~~plt~~T~~li~~~~l-~~mk~~a~lIN~aR 134 (199)
T d1dxya1 103 LHVPGIEQNTHIINEAAF-NLMKPGAIVINTAR 134 (199)
T ss_dssp ECCCCCGGGTTSBCHHHH-HHSCTTEEEEECSC
T ss_pred eeecccccccccccHHHh-hccCCceEEEeccc
Confidence 777777766677666665 55566667777763
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=90.20 E-value=0.062 Score=44.46 Aligned_cols=36 Identities=28% Similarity=0.336 Sum_probs=29.7
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.++++|+|.|+ |-.|+.++..|.+.+ .+|+++.|+.
T Consensus 16 ~~~k~vlIlGa-GGaarai~~aL~~~~---~~i~I~nR~~ 51 (171)
T d1p77a1 16 RPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTF 51 (171)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSH
T ss_pred CCCCEEEEECC-cHHHHHHHHHHcccC---ceeeeccchH
Confidence 47899999995 667999999998743 6889999985
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=90.02 E-value=0.21 Score=40.46 Aligned_cols=36 Identities=17% Similarity=0.287 Sum_probs=26.7
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEE-ecC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLL-RAA 49 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lv-R~~ 49 (492)
+.+|.|.| ||.+|+.+..++++..+.+ .++++. |+.
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~-el~avas~~~ 40 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYL-EMGAMVGIDA 40 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSE-EEEEEECSCT
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcc-eEEEEEecch
Confidence 46899999 9999998777788776655 566654 443
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=89.91 E-value=0.091 Score=43.66 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=30.9
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
+.+|||+||+|-+|...++-.-..|. +|++.+|+.+.
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga---~Via~~~~~~k 68 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGY---QVVAVSGREST 68 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCGGG
T ss_pred CCcEEEEEccccchHHHHHHHHHcCC---CeEEEecchhH
Confidence 35899999999999999998888886 45888887654
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.69 E-value=0.19 Score=45.09 Aligned_cols=27 Identities=26% Similarity=0.247 Sum_probs=21.5
Q ss_pred cchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 21 TGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 21 tGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
||-.|..|++.+++.|++| .++.++.+
T Consensus 45 SGk~G~alA~~~~~~Ga~V---~li~g~~s 71 (290)
T d1p9oa_ 45 SGRRGATSAEAFLAAGYGV---LFLYRARS 71 (290)
T ss_dssp CCHHHHHHHHHHHHTTCEE---EEEEETTS
T ss_pred chHHHHHHHHHHHHcCCEE---EEEecCCc
Confidence 4889999999999999755 66666543
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=89.68 E-value=0.17 Score=41.67 Aligned_cols=37 Identities=8% Similarity=0.029 Sum_probs=28.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.|.+|+|.|+ |-+|...+.-+...|. ++|++..+++
T Consensus 26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga--~~Vi~~d~~~ 62 (174)
T d1jqba2 26 EMGSSVVVIGI-GAVGLMGIAGAKLRGA--GRIIGVGSRP 62 (174)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHTTTC--SCEEEECCCH
T ss_pred CCCCEEEEEcC-Ccchhhhhhhhhcccc--cccccccchh
Confidence 35789999986 9999888887777675 4677777653
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=89.67 E-value=0.19 Score=40.93 Aligned_cols=29 Identities=14% Similarity=0.147 Sum_probs=26.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPN 38 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~ 38 (492)
+.||+|+|.|.+..+|+-|...|.+.|..
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~gat 63 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGCT 63 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCE
T ss_pred cccceEEEEeccccccHHHHHHHHHhhcc
Confidence 57999999999999999999999988753
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=89.35 E-value=0.14 Score=42.03 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=30.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.+||+|+|.|| |-.++.++..|.+.|. +|+++.|+..
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~---~i~I~nRt~~ 52 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDC---AVTITNRTVS 52 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSHH
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccce---EEEeccchHH
Confidence 56899999995 7789999999999874 5889888753
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=89.35 E-value=0.23 Score=40.53 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=28.0
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
-.|.+|+|+| +|-+|...+.-+...|. +|+++.+++
T Consensus 25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga---~vi~v~~~~ 60 (170)
T d1e3ja2 25 QLGTTVLVIG-AGPIGLVSVLAAKAYGA---FVVCTARSP 60 (170)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEEc-ccccchhhHhhHhhhcc---cccccchHH
Confidence 3578999997 68999998887766663 678887754
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=89.26 E-value=0.33 Score=39.76 Aligned_cols=35 Identities=9% Similarity=-0.027 Sum_probs=26.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
.|.+|+|.|+ |-+|...+..+...|. .+|++..++
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~--~~v~~~~~~ 62 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGA--SIIIAVDIV 62 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTC--SEEEEEESC
T ss_pred CCCEEEEeCC-CHHHhhhhhccccccc--ceeeeeccH
Confidence 5789999997 9999999988777776 345555544
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=88.95 E-value=0.92 Score=37.54 Aligned_cols=96 Identities=9% Similarity=0.066 Sum_probs=61.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
..+++|.|.| .|-+|+.+++.|..-|. +|+...|........+.. .+....-.+.+- -...+..
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~~~~~~--~~~~~~~l~~~l----------~~sD~v~ 105 (188)
T d2naca1 42 LEAMHVGTVA-AGRIGLAVLRRLAPFDV---HLHYTDRHRLPESVEKEL--NLTWHATREDMY----------PVCDVVT 105 (188)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHGGGTC---EEEEECSSCCCHHHHHHH--TCEECSSHHHHG----------GGCSEEE
T ss_pred ccccceeecc-ccccchhhhhhhhccCc---eEEEEeeccccccccccc--cccccCCHHHHH----------Hhccchh
Confidence 4678999999 99999999999987664 557777765432221110 011111111111 1356778
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa 122 (492)
+...+++..-++-+.+.+ ..+++=-++||+|=
T Consensus 106 ~~~plt~~T~~li~~~~l-~~mk~ga~lIN~aR 137 (188)
T d2naca1 106 LNCPLHPETEHMINDETL-KLFKRGAYIVNTAR 137 (188)
T ss_dssp ECSCCCTTTTTCBSHHHH-TTSCTTEEEEECSC
T ss_pred hcccccccchhhhHHHHH-HhCCCCCEEEecCc
Confidence 888888888888777766 56666678888874
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=88.94 E-value=0.24 Score=40.31 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=31.9
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
+||+|+|.| .|+.|-.++..|.+.++++ +|+++.+..
T Consensus 1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~-~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVG-GGTGGATAAKYIKLADPSI-EVTLIEPNT 37 (186)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHCTTS-EEEEECSCS
T ss_pred CCCcEEEEC-ccHHHHHHHHHHHHcCCCC-cEEEEECCC
Confidence 589999999 8999999999999999876 677776554
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.67 E-value=0.33 Score=39.59 Aligned_cols=29 Identities=10% Similarity=0.248 Sum_probs=26.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPN 38 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~ 38 (492)
++||+|.|.|.+..+|+-|...|++.|..
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gat 65 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNNAT 65 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred cccceEEEEecCCccchHHHHHHHhccCc
Confidence 57999999999999999999999998853
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=88.51 E-value=0.33 Score=39.77 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=29.0
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
.|.+|+|.|+.| +|...+..+...|. .+|++..++++.
T Consensus 28 ~GdtVlV~GaGG-~G~~~~~~~~~~g~--~~Vi~~~~~~~k 65 (176)
T d2jhfa2 28 QGSTCAVFGLGG-VGLSVIMGCKAAGA--ARIIGVDINKDK 65 (176)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHHTTC--SEEEEECSCGGG
T ss_pred CCCEEEEECCCC-cHHHHHHHHHHcCC--ceEEeecCcHHH
Confidence 468999999954 88888888887775 577888776543
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=88.38 E-value=1.5 Score=36.35 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=59.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
++|++|.|.| .|-||+.+++.+..-|. +|+...+........... ......-++.+-+ ...+..
T Consensus 45 l~g~tvgIiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~~~~~~--~~~~~~~l~~ll~----------~sD~v~ 108 (191)
T d1gdha1 45 LDNKTLGIYG-FGSIGQALAKRAQGFDM---DIDYFDTHRASSSDEASY--QATFHDSLDSLLS----------VSQFFS 108 (191)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECSSCCCHHHHHHH--TCEECSSHHHHHH----------HCSEEE
T ss_pred ecccceEEee-cccchHHHHHHHHhhcc---ccccccccccccchhhcc--cccccCCHHHHHh----------hCCeEE
Confidence 4589999999 89999999998887664 445655544332211110 1111122222222 256777
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEccc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLAA 122 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa 122 (492)
+..-++...-++-+.+.+ ..+++=-++||+|=
T Consensus 109 l~~plt~~T~~li~~~~l-~~mk~~a~lIN~sR 140 (191)
T d1gdha1 109 LNAPSTPETRYFFNKATI-KSLPQGAIVVNTAR 140 (191)
T ss_dssp ECCCCCTTTTTCBSHHHH-TTSCTTEEEEECSC
T ss_pred ecCCCCchHhheecHHHh-hCcCCccEEEecCC
Confidence 778888777777777665 55666667888763
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.33 E-value=0.47 Score=39.88 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=26.7
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
|+|.|.| .||+|..++..|.+.|++| ++....
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V---~g~D~n 32 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEV---IGVDVS 32 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEE---EEECSC
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcE---EEEeCC
Confidence 6899996 9999999999999999754 666543
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.10 E-value=0.25 Score=39.43 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=28.8
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEe
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR 47 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR 47 (492)
++||+|||.|| |.+|..-++.|++.|- +|.++..
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~GA---~VtVvap 44 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPTGC---KLTLVSP 44 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTC---EEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeC
Confidence 78999999996 8999999999999995 4455543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.86 E-value=0.38 Score=39.16 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=28.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
.|.+|+|.|+ |-+|...+.-+...|. .+|++..+.+
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~--~~Vi~~d~~~ 61 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLSA 61 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCC--ceEEeccCCH
Confidence 4789999986 9999998888877775 5677777653
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=87.33 E-value=0.26 Score=40.14 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=29.4
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
|+|+|.| .|.+|..++..|.+.|+.+ +|++..|++
T Consensus 2 k~I~IIG-~G~mG~sla~~L~~~g~~~-~I~~~D~~~ 36 (171)
T d2g5ca2 2 QNVLIVG-VGFMGGSFAKSLRRSGFKG-KIYGYDINP 36 (171)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCCS-EEEEECSCH
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCCe-EEEEEECCh
Confidence 5799998 6999999999999999875 677776653
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=87.16 E-value=0.28 Score=40.90 Aligned_cols=38 Identities=13% Similarity=0.080 Sum_probs=30.0
Q ss_pred CCCEEEE-eCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 11 ENKTILV-TGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 11 ~~~~vlI-TGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
.|.+|+| +||+|-+|...+.-....|. +|++.+|+...
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga---~vI~~v~~~~~ 66 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLLNF---NSISVIRDRPN 66 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTC---EEEEEECCCTT
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhcCC---eEEEEEecccc
Confidence 4667777 69999999999887777774 66888887654
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=86.85 E-value=0.66 Score=36.21 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=19.7
Q ss_pred EEEEeCCcchhhHHHHHHHHhh
Q 037479 14 TILVTGATGFLAKIFVEKILRV 35 (492)
Q Consensus 14 ~vlITGatGflG~~l~~~Ll~~ 35 (492)
+|.|.|++|-+|+.+++.+.+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~ 22 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAA 22 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS
T ss_pred CEEEECCCCHHHHHHHHHHHhC
Confidence 6899999999999999987764
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=86.80 E-value=0.8 Score=34.34 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=29.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
+.+|.|.| +|.||+-++....+-|. +++++..+++.
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~lG~---~v~v~d~~~~~ 46 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRLGV---EVIAVDRYADA 46 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTTTC---EEEEEESSTTC
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHCCC---EEEEEcCCCCC
Confidence 46799999 89999999999999886 44777776554
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=85.91 E-value=0.68 Score=37.59 Aligned_cols=37 Identities=8% Similarity=-0.073 Sum_probs=27.6
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
.|.+|+|.|++ .+|...+..+...|. ++|++..+++.
T Consensus 28 ~G~tVlI~GaG-GvG~~aiq~ak~~G~--~~vi~~~~~~~ 64 (176)
T d2fzwa2 28 PGSVCAVFGLG-GVGLAVIMGCKVAGA--SRIIGVDINKD 64 (176)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHHTC--SEEEEECSCGG
T ss_pred CCCEEEEecch-hHHHHHHHHHHHHhc--CceEEEcccHH
Confidence 47899999985 589988888887776 45666666543
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=84.87 E-value=1.6 Score=31.13 Aligned_cols=73 Identities=16% Similarity=0.150 Sum_probs=43.2
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEe
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVP 91 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~ 91 (492)
+|+|.++|-.|-==+.|++-|++.|+.| ..-.+... ...++|+ ..++.+..
T Consensus 1 ~~~ihfiGIgG~GMs~LA~~L~~~G~~V---sGSD~~~~--~~t~~L~------------------------~~Gi~i~~ 51 (89)
T d1j6ua1 1 HMKIHFVGIGGIGMSAVALHEFSNGNDV---YGSNIEET--ERTAYLR------------------------KLGIPIFV 51 (89)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEE---EEECSSCC--HHHHHHH------------------------HTTCCEES
T ss_pred CcEEEEEeECHHHHHHHHHHHHhCCCeE---EEEeCCCC--hhHHHHH------------------------HCCCeEEe
Confidence 3688888744432246888899999754 55554422 2233343 25565555
Q ss_pred cCCCCCCCCCCchhhHHHhccCccEEEEcccccCc
Q 037479 92 GDITREDLGVKDSNLREEMWNKLDVVINLAATTNF 126 (492)
Q Consensus 92 gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~~ 126 (492)
|. +.+ .+.++|.||...|...-
T Consensus 52 gh---------~~~----~i~~~d~vV~SsAI~~~ 73 (89)
T d1j6ua1 52 PH---------SAD----NWYDPDLVIKTPAVRDD 73 (89)
T ss_dssp SC---------CTT----SCCCCSEEEECTTCCTT
T ss_pred ee---------ccc----ccCCCCEEEEecCcCCC
Confidence 42 111 12678999999987543
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=84.70 E-value=1.8 Score=31.24 Aligned_cols=76 Identities=18% Similarity=0.084 Sum_probs=45.9
Q ss_pred hhcCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCce
Q 037479 8 EFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKI 87 (492)
Q Consensus 8 ~~~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v 87 (492)
+..+.|+|.+.|-.|--=+.|++-|.+.|++| ..-.+... ...+++. ..++
T Consensus 4 ~~~~~~~ihfiGigG~GMs~LA~~L~~~G~~V---sGSD~~~~--~~~~~L~------------------------~~Gi 54 (96)
T d1p3da1 4 EMRRVQQIHFIGIGGAGMSGIAEILLNEGYQI---SGSDIADG--VVTQRLA------------------------QAGA 54 (96)
T ss_dssp CCTTCCEEEEETTTSTTHHHHHHHHHHHTCEE---EEEESCCS--HHHHHHH------------------------HTTC
T ss_pred cchhCCEEEEEEECHHHHHHHHHHHHhCCCEE---EEEeCCCC--hhhhHHH------------------------HCCC
Confidence 44567899998744432267899999999755 55544321 1222222 2456
Q ss_pred EEEecCCCCCCCCCCchhhHHHhccCccEEEEcccccC
Q 037479 88 TLVPGDITREDLGVKDSNLREEMWNKLDVVINLAATTN 125 (492)
Q Consensus 88 ~~v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~Aa~~~ 125 (492)
.+..++-. ..++++|.||-..|...
T Consensus 55 ~v~~g~~~-------------~~i~~~d~vV~S~AI~~ 79 (96)
T d1p3da1 55 KIYIGHAE-------------EHIEGASVVVVSSAIKD 79 (96)
T ss_dssp EEEESCCG-------------GGGTTCSEEEECTTSCT
T ss_pred eEEECCcc-------------ccCCCCCEEEECCCcCC
Confidence 66555422 12367899999988653
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=84.40 E-value=0.35 Score=37.39 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=44.2
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEEEec
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITLVPG 92 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~v~g 92 (492)
|.|+|.| -|-+|..+++.|. +.+ |.++...+. ..+.+. ..++.++.|
T Consensus 1 kHivI~G-~g~~g~~l~~~L~--~~~---i~vi~~d~~---~~~~~~------------------------~~~~~~i~G 47 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELR--GSE---VFVLAEDEN---VRKKVL------------------------RSGANFVHG 47 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSC--GGG---EEEEESCTT---HHHHHH------------------------HTTCEEEES
T ss_pred CEEEEEC-CCHHHHHHHHHHc--CCC---CEEEEcchH---HHHHHH------------------------hcCcccccc
Confidence 5688998 5778999999985 333 355544332 222222 267889999
Q ss_pred CCCCCCCCCCchhhHH-HhccCccEEEEcc
Q 037479 93 DITREDLGVKDSNLRE-EMWNKLDVVINLA 121 (492)
Q Consensus 93 Dl~~~~lgl~~~~~~~-~~~~~vd~Vih~A 121 (492)
|.+ +++.++ .-+++++.++=+.
T Consensus 48 d~~-------~~~~L~~a~i~~A~~vi~~~ 70 (129)
T d2fy8a1 48 DPT-------RVSDLEKANVRGARAVIVNL 70 (129)
T ss_dssp CTT-------SHHHHHHTTCTTCSEEEECC
T ss_pred ccC-------CHHHHHHhhhhcCcEEEEec
Confidence 999 444442 3356888888544
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=84.38 E-value=0.39 Score=39.10 Aligned_cols=37 Identities=27% Similarity=0.360 Sum_probs=31.2
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
++++|+|.|+ |..|++++..|.+.|. ++|+++.|+.+
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~--~~I~I~nR~~~ 52 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGF--EKLKIYARNVK 52 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTC--CCEEEECSCHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEecccHH
Confidence 5789999995 8899999999999875 67888888753
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=83.79 E-value=3.9 Score=33.32 Aligned_cols=93 Identities=17% Similarity=0.072 Sum_probs=57.4
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCCcCHHHHHHHHhhcChhhHHHHHhcCCchhhhccCceEE
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADAKSATVRFHNEIIGKDLFRVLKEKNGTHLNALISEKITL 89 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~~~~~~r~~~~~~~~~~f~~l~~~~~~~~~~~~~~~v~~ 89 (492)
..++++.|.| .|-+|+.+++.+..-|. +|+...|....... ...-....-++.+-+ ...+..
T Consensus 42 l~~k~vgiiG-~G~IG~~va~~~~~fg~---~v~~~d~~~~~~~~----~~~~~~~~~l~ell~----------~sDiv~ 103 (184)
T d1ygya1 42 IFGKTVGVVG-LGRIGQLVAQRIAAFGA---YVVAYDPYVSPARA----AQLGIELLSLDDLLA----------RADFIS 103 (184)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECTTSCHHHH----HHHTCEECCHHHHHH----------HCSEEE
T ss_pred ccceeeeecc-ccchhHHHHHHhhhccc---eEEeecCCCChhHH----hhcCceeccHHHHHh----------hCCEEE
Confidence 4578999998 89999999998876553 55666554332111 101111111222211 256777
Q ss_pred EecCCCCCCCCCCchhhHHHhccCccEEEEcc
Q 037479 90 VPGDITREDLGVKDSNLREEMWNKLDVVINLA 121 (492)
Q Consensus 90 v~gDl~~~~lgl~~~~~~~~~~~~vd~Vih~A 121 (492)
+..-++...-++-+.+.+ ..+++--++||+|
T Consensus 104 ~~~Plt~~T~~lin~~~l-~~mk~~a~lIN~s 134 (184)
T d1ygya1 104 VHLPKTPETAGLIDKEAL-AKTKPGVIIVNAA 134 (184)
T ss_dssp ECCCCSTTTTTCBCHHHH-TTSCTTEEEEECS
T ss_pred EcCCCCchhhhhhhHHHH-hhhCCCceEEEec
Confidence 888888877777777665 5556666777776
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=83.74 E-value=1.1 Score=36.49 Aligned_cols=38 Identities=11% Similarity=0.032 Sum_probs=29.6
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
-.|.+|+|.| .|-+|...+..+...|. .+|++..+++.
T Consensus 27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga--~~Vi~~d~~~~ 64 (174)
T d1e3ia2 27 TPGSTCAVFG-LGCVGLSAIIGCKIAGA--SRIIAIDINGE 64 (174)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTC--SEEEEECSCGG
T ss_pred CCCCEEEEEC-CChHHHHHHHHHHHhCC--ceeeeeccchH
Confidence 3578999998 59999999988888776 56777766543
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=83.73 E-value=1.5 Score=34.19 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=28.5
Q ss_pred cHHhhc-CCCEEEEeCCc---chhhHHHHHHHHhhCCC
Q 037479 5 SVLEFL-ENKTILVTGAT---GFLAKIFVEKILRVQPN 38 (492)
Q Consensus 5 ~~~~~~-~~~~vlITGat---GflG~~l~~~Ll~~g~~ 38 (492)
.+.+++ +-|+|.|.||| |-.|..++..|++.|++
T Consensus 11 ~i~~~L~~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~ 48 (139)
T d2d59a1 11 DIREILTRYKKIALVGASPKPERDANIVMKYLLEHGYD 48 (139)
T ss_dssp HHHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTCE
T ss_pred HHHHHHhcCCeEEEEeecCCCCCchHHHHHHHHHCCCE
Confidence 355544 67999999998 78999999999999974
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=83.68 E-value=0.77 Score=34.96 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=30.5
Q ss_pred CCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 12 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 12 ~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
+++|+|.| .||+|-.+++.|.+.|. +|.++.|++.-
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g~---~Vtli~~~~~~ 65 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAGV---HVSLVETQPRL 65 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSSST
T ss_pred CCeEEEEC-cchhHHHHHHHhhcccc---eEEEEeecccc
Confidence 68999998 89999999999999884 56888887653
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=83.54 E-value=0.7 Score=36.76 Aligned_cols=37 Identities=16% Similarity=0.316 Sum_probs=29.0
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
|+|.|.|+||-||+..++-+.+ .++--+|.+|+-.++
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~-~~d~f~v~~Lsa~~N 38 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRH-NPEHFRVVALVAGKN 38 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTTTEEEEEEEESSC
T ss_pred CeEEEEcCCcHHHHHHHHHHHh-CCCCcEEEEEEecCc
Confidence 6899999999999999997765 454447888876544
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=83.24 E-value=0.48 Score=37.74 Aligned_cols=34 Identities=18% Similarity=0.324 Sum_probs=28.8
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAA 49 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~ 49 (492)
|+|.+.| +|-+|++++..|++.|+ .+|++..|++
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~~--~~i~v~~r~~ 34 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQGG--YRIYIANRGA 34 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCS--CEEEEECSSH
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCC--CcEEEEeCCh
Confidence 6899998 59999999999999985 4778887764
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=82.99 E-value=1.3 Score=36.16 Aligned_cols=39 Identities=13% Similarity=0.039 Sum_probs=31.3
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCCC
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADA 51 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~~ 51 (492)
-.|.+|+|+|+ |-+|...+..+...|. .+|+++.+++..
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~--~~Vi~vd~~~~k 66 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCKSAGA--SRIIGIDLNKDK 66 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCGGG
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCC--ceEEEecCcHHH
Confidence 35789999985 9999999998887775 678888876543
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=81.31 E-value=1.3 Score=35.83 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=26.9
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
-.|.+|+|.|+ |-+|...+..+...|. .+|++..++
T Consensus 31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~--~~vv~~~~~ 66 (172)
T d1h2ba2 31 YPGAYVAIVGV-GGLGHIAVQLLKVMTP--ATVIALDVK 66 (172)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCC--CEEEEEESS
T ss_pred CCCCEEEEeCC-ChHHHHHHHHHHhhcC--cccccccch
Confidence 34789999985 9999998888877776 355665554
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=81.29 E-value=0.18 Score=42.23 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=28.2
Q ss_pred cCCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEec
Q 037479 10 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRA 48 (492)
Q Consensus 10 ~~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~ 48 (492)
+..++|.|.| +|-.|.+++..|.+.|++ |.+..|.
T Consensus 5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~---V~l~~r~ 39 (189)
T d1n1ea2 5 LYLNKAVVFG-SGAFGTALAMVLSKKCRE---VCVWHMN 39 (189)
T ss_dssp CCEEEEEEEC-CSHHHHHHHHHHHTTEEE---EEEECSC
T ss_pred ceeceEEEEC-CCHHHHHHHHHHHHcCCe---EEEEEec
Confidence 3446799999 788999999999998864 5777775
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=81.09 E-value=1 Score=36.89 Aligned_cols=34 Identities=9% Similarity=0.143 Sum_probs=28.1
Q ss_pred CEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 13 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 13 ~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
|+|.|.| +|-.|.+++..|.+.|++ |.+..|+.+
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~---V~l~~r~~~ 34 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNE---VRIWGTEFD 34 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCE---EEEECCGGG
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCE---EEEEEeccc
Confidence 6899999 699999999999999964 477777543
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=80.10 E-value=1.3 Score=33.75 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=29.8
Q ss_pred CCCEEEEeCCcchhhHHHHHHHHhhCCCCCeEEEEEecCC
Q 037479 11 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAAD 50 (492)
Q Consensus 11 ~~~~vlITGatGflG~~l~~~Ll~~g~~V~~i~~lvR~~~ 50 (492)
++++|.|.| .||+|-.+++.|.+.|. +|.++-|...
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~---~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGK---KVTVIDILDR 64 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEEESSSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccce---EEEEEEecCc
Confidence 367999998 89999999999999985 5577777654
|