Citrus Sinensis ID: 037502

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420------
Protein Sequence
MLANNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHIRSEQQGLQQQPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFLNRIHQGDKSTRNVKHHNLELQLLTTSNPIDVSDDSPKRDHDHNHSTQLQLSIGSSDISEKNELNVTYLSSTTNGKPAMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSRLPPDENSLVLSYMSSATTEGE
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccEEcccEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHcccccccccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccHHHccccccccccccEEEEEcHHHHHHcccEEEHHccccccHHHHHHHHccccccccEEEEccccccEEEEEEccccccccccHHHHHHHHHHHHHHHccccccccEEEEccccccEEEEccHHHHHcccccccEEccccEEEEcccccHHcHHHHcHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccc
Coil and Loop (DISEMBL)
mlannspsaipcssepfsclengishnkrkrrpagtpdpdaevvslspktllesDRYVCEICNqgfqrdqnlqmhrrrhkvpwkllkretpvvrkrvfvcpepsclhhdpchalgdlvgikKHFRrkhsnhkqwvcekcskgyavqsDYKAHLktcgtrghscdcgrvFSRVESFIehqdacskghirseqqglqqqpaaclsrtasspspssdtnfsashwpnlmvpkvptidtmflnrihqgdkstrnvkhhnlelqllttsnpidvsddspkrdhdhnhstqlqlsigssdiseknelNVTYLssttngkpaMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQqfqsrlppdensLVLSYMssattege
Flexible Loop (DISEMBL)
mlannspsaipcssepfsCLENGIShnkrkrrpagtpdpdaevvslspktlleSDRYVCEICNQgfqrdqnlqmhrrrhkvpwkllkretpvvrKRVFVCPepsclhhdpcHALGDLVGIKKHFRRKhsnhkqwvcekcsKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHIRSEQQGLQQQPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFLNRIHQGDKSTRNVKHHNLELQLLTTSNPIDVSDDSPKRDHDHNHSTQLqlsigssdisekNELNVTylssttngkpamDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFqsrlppdenslVLSYmssattege
Low Complexity Region (SEG)
MLANNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHIRSEQQGLQQQPAACLsrtasspspssdtnfsasHWPNLMVPKVPTIDTMFLNRIHQGDKSTRNVKHHNLELQLLTTSNPIDVSDDSPKRDHDHNHSTQLQLSIGSSDISEKNELNVTYLSSTTNGKPAMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSRLPPDENSLVLSYMSSATTEGE
Disordered region (IsUnstruct)
**************************************************LLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD****************************************HWPNLMVPKVPTIDTMFLNRIHQ****************************************************************************************************************************************EHAIKQINSTILRVTCHACKQQF************************
Disordered Region (DISOPRED)
***************PFSCLENGISH************PDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL**********VFVCPEPSCLHHDPCH**G**VGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHI*********************************************************************************************************************************************************************************************************TILRVTCHACK*****************YM*SA*****
Disordered Region (DISEMBL)
************SSEPFSCLENGISH******************SLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKH*********QWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ**************************************SASHWPNLMVPKVPTIDTMFLNRIHQGDKSTRNVKHHNLELQLLTTSNPIDVS****************QLSIGSSDISEKNELNVTYLSSTTNGKPAMDIASRLKEQAREQLRLAMAEKA**********RQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSRLPPDENSLVLSY*********
Disordered Region (DISPRO)
*********************************AGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHIR********************************************************************EL*LLTTSNPID*************************************************************LRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSRLPPDENSLVLSYMSS******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLANNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHIRSEQQGLQQQPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFLNRIHQGDKSTRNVKHHNLELQLLTTSNPIDVSDDSPKRDHDHNHSTQLQLSIGSSDISEKNELNVTYLSSTTNGKPAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxINSTILRVTCHACKQQFQSRLPPDENSLVLSYMSSATTEGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	426	2.2.26 [Sep-21-2011]
Q9ZWA6	506	Zinc finger protein MAGPI	no	no	0.361	0.304	0.651	2e-59
Q700D2	503	Zinc finger protein JACKD	no	no	0.361	0.306	0.628	4e-58
Q9FFH3	466	Zinc finger protein NUTCR	no	no	0.361	0.330	0.625	5e-57
Q9C8N5	499	Protein SENSITIVE TO PROT	no	no	0.406	0.346	0.300	2e-14
Q943I6	522	Zinc finger protein STOP1	no	no	0.354	0.289	0.302	1e-13
Q2QX40	465	Zinc finger protein STAR3	no	no	0.333	0.305	0.320	5e-12
Q8VWG3	303	Protein TRANSPARENT TESTA	no	no	0.335	0.471	0.303	3e-09
Q6ZSB9	765	Zinc finger and BTB domai	yes	no	0.302	0.168	0.293	1e-08
Q8BXX2	756	Zinc finger and BTB domai	yes	no	0.241	0.136	0.301	7e-08
Q02386	682	Zinc finger protein 45 OS	no	no	0.300	0.187	0.297	6e-07

>sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1

 Score =  230 bits (586), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 101/155 (65%), Positives = 124/155 (80%), Gaps = 1/155 (0%)

Query: 28  KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 87
           K+KR   G PDP+AEV++LSPKTL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 41  KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 100

Query: 88  RETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 147
           R +  VRKRV+VCPE SC+HH P  ALGDL GIKKHF RKH   K+W CEKC+K YAVQS
Sbjct: 101 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHG-EKKWKCEKCAKRYAVQS 159

Query: 148 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 182
           D+KAH KTCGTR + CDCG +FSR +SFI H+  C
Sbjct: 160 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFC 194

Probable transcription factor that regulates tissue boundaries and asymmetric cell division. Might be involved in the sequestration of 'SHORT-ROOT' to the nucleus.
Arabidopsis thaliana (taxid: 3702)

>sp|Q700D2|JKD_ARATH Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1

 Score =  226 bits (575), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 98/156 (62%), Positives = 125/156 (80%), Gaps = 2/156 (1%)

Query: 28  KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 87
           K+KR   GTPDPDA+V++LSP TL+ ++R+VCEICN+GFQRDQNLQ+HRR H +PWKL +
Sbjct: 53  KKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112

Query: 88  R-ETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQ 146
           R +  V++K+V++CP  +C+HHD   ALGDL GIKKH+ RKH   K+W CEKCSK YAVQ
Sbjct: 113 RSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHG-EKKWKCEKCSKKYAVQ 171

Query: 147 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 182
           SD+KAH KTCGTR + CDCG +FSR +SFI H+  C
Sbjct: 172 SDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFC 207

Probable transcription factor that regulates tissue boundaries and asymmetric cell division by a rapid up-regulation of 'SCARECROW' (SCR), thus controlling the nuclear localization of 'SHORT-ROOT' (SHR) and restricting its action. Required for radial patterning and stem cell maintenance. Counteracted by 'MAGPIE' (MGP).

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1

 Score =  222 bits (565), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 97/155 (62%), Positives = 122/155 (78%), Gaps = 1/155 (0%)

Query: 28  KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 87
           K+KR   G PDP+AEV++LSP TL+ ++R++CE+C +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 37  KKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQ 96

Query: 88  RETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 147
           R +  VRKRV+VCPE +C+HH    ALGDL GIKKHF RKH   K+W CEKC+K YAVQS
Sbjct: 97  RTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHG-EKKWTCEKCAKRYAVQS 155

Query: 148 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 182
           D+KAH KTCGTR + CDCG +FSR +SFI H+  C
Sbjct: 156 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFC 190

Putative transcription factor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 30/203 (14%)

Query: 37  PDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKL----------- 85
           P    E++ L  + +L    + C IC +GF+RD NL+MH R H   +K            
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283

Query: 86  LKRETPVVRKRVFVCPEPSCL---HHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC-SK 141
           +    P++ KR + CP   C     H     L  ++ +K H++R H + K + C +C +K
Sbjct: 284 VPGSEPMLIKR-YSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD-KSFTCSRCHTK 341

Query: 142 GYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHIRSEQQGLQQQPAAC 201
            ++V +D K H K CG     C CG  FSR +    H  A  +GH           PA  
Sbjct: 342 KFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHI-ALFQGHT----------PAIP 390

Query: 202 LSRTASSPSPSSDTNFSASHWPN 224
           L  T   PS S+ T   +S   N
Sbjct: 391 LEET--KPSASTSTQRGSSEGGN 411

Probable transcription factor. Plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q943I6|STOP1_ORYSJ Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 24/175 (13%)

Query: 27  NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL 86
            +R+  P G+      V+ L  + +L    + C IC +GF+RD NL+MH R H   +K  
Sbjct: 256 GERENLPPGS----YVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTA 311

Query: 87  K-----------RETPVVRKRVFVCPEPSCL---HHDPCHALGDLVGIKKHFRRKHSNHK 132
                          PV R   + CP   C     H     L  ++ +K H++R H + K
Sbjct: 312 AALAKPSKDSSLESAPVTR---YSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCD-K 367

Query: 133 QWVCEKC-SKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGH 186
            + C +C +K ++V +D K H K CG     C CG  FSR +    H  A  +GH
Sbjct: 368 SYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHV-ALFQGH 421

Probable transcription factor that may be involved in aluminum tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q2QX40|ART1_ORYSJ Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 73/159 (45%), Gaps = 17/159 (10%)

Query: 43  VVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK-----------LLKRETP 91
           V+ L    +L    + C IC +GF+RD NL+MH R H   +K               E P
Sbjct: 215 VLQLEEDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQP 274

Query: 92  VVRKRVFVCPEPSCLH---HDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC-SKGYAVQS 147
              +R + CP   C     H     L  ++ +K H++R H   K+ VC +C +K ++V +
Sbjct: 275 PQPERRYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCE-KRHVCGRCGAKRFSVMA 333

Query: 148 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGH 186
           D K H K CG     C CG  FSR +    H  A  +GH
Sbjct: 334 DLKTHEKHCGRDRWLCSCGTSFSRKDKLFAHV-ALFQGH 371

Transcriptional activator that regulates the expression of genes involved in aluminum (Al) tolerance. Binds to the promoter of STAR1 and regulates transcript expression of STAR1 STAR2 and ART1 required for Al tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8VWG3|TT1_ARATH Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1

 Score = 63.9 bits (154), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 41  AEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKL----LKRETP--VVR 94
           A  +    + L+    + C +C + F R  NLQMH   H   ++     LK   P  ++ 
Sbjct: 129 AYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLG 188

Query: 95  KRVFVCPEPSC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKA 151
              + C E  C   + H     L D   ++ H++RKH  HK + C  C K  AV+ D++ 
Sbjct: 189 IPCYCCVE-GCRNHIDHPRSKPLKDFRTLQTHYKRKHG-HKPFSCRLCGKLLAVKGDWRT 246

Query: 152 HLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGH 186
           H K CG R   C CG  F    S  +H  A   GH
Sbjct: 247 HEKNCGKRW-VCVCGSDFKHKRSLKDHVKAFGSGH 280

May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZSB9|ZBT49_HUMAN Zinc finger and BTB domain-containing protein 49 OS=Homo sapiens GN=ZBTB49 PE=2 SV=3

 Score = 61.6 bits (148), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 31/160 (19%)

Query: 22  NGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKV 81
           N IS  +R   PA   D          +TL    +Y CE+C + F+   NL++H+R H  
Sbjct: 368 NCISETERPEDPAALED--------QSQTLQSQRQYACELCGKPFKHPSNLELHKRSH-- 417

Query: 82  PWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSK 141
                        ++ F C    C  H           ++ H RR HS  K ++CE C K
Sbjct: 418 -----------TGEKPFEC--NICGKH-----FSQAGNLQTHLRR-HSGEKPYICEICGK 458

Query: 142 GYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQ 179
            +A   D + H+    G + H CD CGR FS   +  EH+
Sbjct: 459 RFAASGDVQRHIIIHSGEKPHLCDICGRGFSNFSNLKEHK 498

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BXX2|ZBT49_MOUSE Zinc finger and BTB domain-containing protein 49 OS=Mus musculus GN=Zbtb49 PE=2 SV=1

 Score = 58.9 bits (141), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 23/126 (18%)

Query: 56  RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALG 115
           +Y CE+C + F+   NL++H+R H               ++ F C    C  H       
Sbjct: 385 QYACELCGKPFKHPSNLELHKRSH-------------TGEKPFEC--NICGKH-----FS 424

Query: 116 DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVE 173
               ++ H RR HS  K ++CE C K +A   D + H+    G + H CD CGR FS   
Sbjct: 425 QAGNLQTHLRR-HSGEKPYICEICGKRFAASGDVQRHIIIHSGEKPHLCDTCGRGFSNFS 483

Query: 174 SFIEHQ 179
           +  EH+
Sbjct: 484 NLKEHK 489

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q02386|ZNF45_HUMAN Zinc finger protein 45 OS=Homo sapiens GN=ZNF45 PE=2 SV=2

 Score = 55.8 bits (133), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 30/158 (18%)

Query: 57  YVCEICNQGFQRDQNLQMHRRRH--KVPWK-------LLKRETPVVRKRVFVCPEPSCLH 107
           Y CE C  GF +   LQ+H + H  K P+K          R      +R+    +P    
Sbjct: 276 YKCEECGVGFSQRSYLQVHLKVHTGKKPYKCEECGKSFSWRSRLQAHERIHTGEKPY--- 332

Query: 108 HDPCHALGDLVGIKKHFR---RKHSNHKQWVCEKCSKGYAVQSDYKAH-LKTCGTRGHSC 163
              C+A G       H     R H+  K + CE+C KG++V S  +AH +   G + + C
Sbjct: 333 --KCNACGKSFSYSSHLNIHCRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGEKPYKC 390

Query: 164 -DCGRVFSRVESFIEHQ-----------DACSKGHIRS 189
            +CG+ F R  + ++HQ           DAC KG  RS
Sbjct: 391 EECGKGFCRASNLLDHQRGHTGEKPYQCDACGKGFSRS 428

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	426
224120400	456	predicted protein [Populus trichocarpa]	0.988	0.923	0.760	0.0
255587500	442	nucleic acid binding protein, putative [	0.978	0.943	0.772	0.0
359491050	455	PREDICTED: uncharacterized protein LOC10	0.946	0.885	0.751	1e-178
356520699	483	PREDICTED: uncharacterized protein LOC10	0.990	0.873	0.690	1e-172
356531110	474	PREDICTED: uncharacterized protein LOC10	0.988	0.888	0.708	1e-170
225424490	425	PREDICTED: uncharacterized protein LOC10	0.927	0.929	0.697	1e-155
302398713	503	C3HL domain class transcription factor [	0.985	0.834	0.653	1e-152
118486527	422	unknown [Populus trichocarpa]	0.967	0.976	0.668	1e-151
224099625	393	predicted protein [Populus trichocarpa]	0.903	0.979	0.652	1e-147
297737571	387	unnamed protein product [Vitis vinifera]	0.854	0.940	0.685	1e-147

>gi|224120400|ref|XP_002318320.1| predicted protein [Populus trichocarpa] gi|222858993|gb|EEE96540.1| predicted protein [Populus trichocarpa]

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/446 (76%), Positives = 372/446 (83%), Gaps = 25/446 (5%)

Query: 1   MLANNS-PSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC 59
           MLANNS  S++PC+SEPFSCLENG + NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC
Sbjct: 1   MLANNSLSSSLPCNSEPFSCLENGNNINKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC 60

Query: 60  EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVG 119
           EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVG
Sbjct: 61  EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVG 120

Query: 120 IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ 179
           IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ
Sbjct: 121 IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ 180

Query: 180 DACSKGHIRSEQQGLQQQPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFL- 238
           DAC+ G++RSE Q L  QPAACLSRTASSPSPSSDTNFS + W  L++P+      MF  
Sbjct: 181 DACNMGNLRSESQSL--QPAACLSRTASSPSPSSDTNFSTAPWLPLIIPRTTPDHAMFFI 238

Query: 239 ------NRIHQGDKSTRNVKHHNLELQLLTTS-NPIDVSDDSPKRDHDHNHSTQLQLSIG 291
                 + + + D S     +HNLELQL T S NP+++S  SPKR  + NHSTQLQLSIG
Sbjct: 239 TPTTTSSVVDKSDSSKSAAHYHNLELQLSTASGNPLEIS-VSPKR--EDNHSTQLQLSIG 295

Query: 292 SSDISEKNELNVTYLS---------STTNGKPAMDI-ASRLKEQA-REQLRLAMAEKACA 340
           SSD+S++NE N++Y              NG P  ++ ASRLKEQ  REQL +AMAEK  A
Sbjct: 296 SSDVSDRNESNISYTDKDHGKSSPRENNNGSPRPELGASRLKEQVIREQLMMAMAEKIHA 355

Query: 341 EEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQ 400
           EEARQ AKRQIELAEQEFANAKRIRQQAQAELDKAQALK+HAIKQINSTIL++TCHACKQ
Sbjct: 356 EEARQQAKRQIELAEQEFANAKRIRQQAQAELDKAQALKQHAIKQINSTILQITCHACKQ 415

Query: 401 QFQSRLPPDENSLVLSYMSSATTEGE 426
           +F +R   DENSLV+SYMSSATTE E
Sbjct: 416 KFHARTQADENSLVMSYMSSATTEDE 441

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587500|ref|XP_002534293.1| nucleic acid binding protein, putative [Ricinus communis] gi|223525559|gb|EEF28090.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/436 (77%), Positives = 369/436 (84%), Gaps = 19/436 (4%)

Query: 1   MLANNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MLANNS S++P SSEPFSCLENG ++NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
Sbjct: 1   MLANNSSSSVP-SSEPFSCLENGSNNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 59

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGI 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGI
Sbjct: 60  ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGI 119

Query: 121 KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 180
           KKHFRRKHSNHKQWVCEKCSK YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD
Sbjct: 120 KKHFRRKHSNHKQWVCEKCSKAYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 179

Query: 181 ACSKGHIRSEQQGLQQ-QPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFLN 239
           AC+ G +R ++Q     QPAACLSRTASSPSPS+D NFS + WP L++ +  + D +FL 
Sbjct: 180 ACNMGRLRPDRQSQSTLQPAACLSRTASSPSPSTDNNFSTAPWPPLLIARPTSTDAIFLV 239

Query: 240 RIHQGDKSTRNVKHHNLELQLLTTSNPIDVSDDSPKRDHDHNHSTQLQLSIGSSDISEKN 299
                DK     K +NL+LQL +TSNP+ +S  SPKR  D NHSTQLQLSIGSSD+SEKN
Sbjct: 240 SPTTIDK-----KDYNLDLQLSSTSNPLVLS-ISPKR--DDNHSTQLQLSIGSSDLSEKN 291

Query: 300 ELNVTYLS---------STTNGKPAMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQ 350
           E ++   +          + N +     A RLKEQAREQLRLAMAEKA AEEARQ AKRQ
Sbjct: 292 ESHIASTNKDAGKLSPRESNNSEKPESAALRLKEQAREQLRLAMAEKAYAEEARQRAKRQ 351

Query: 351 IELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSRLPPDE 410
           IELAEQEFANAKRIRQQAQAE DKAQAL+EHA+KQINST+L+VTCHACKQQFQ+R PPDE
Sbjct: 352 IELAEQEFANAKRIRQQAQAEFDKAQALREHAMKQINSTLLQVTCHACKQQFQTRTPPDE 411

Query: 411 NSLVLSYMSSATTEGE 426
           NSLVLS+MSSA TEGE
Sbjct: 412 NSLVLSHMSSAVTEGE 427

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491050|ref|XP_002283220.2| PREDICTED: uncharacterized protein LOC100260988 [Vitis vinifera]

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 326/434 (75%), Positives = 356/434 (82%), Gaps = 31/434 (7%)

Query: 14  SEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQ 73
           +EPF+ LENG S++KRKRRPAGTPDPDAEVVSLSPKTLLESDRY+CEICNQGFQRDQNLQ
Sbjct: 15  AEPFASLENG-SNSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYICEICNQGFQRDQNLQ 73

Query: 74  MHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQ 133
           MHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQ
Sbjct: 74  MHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQ 133

Query: 134 WVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHIRSEQQG 193
           WVCEKC+KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC+ GH+R E Q 
Sbjct: 134 WVCEKCNKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHLRPESQL 193

Query: 194 LQQQPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFLNRIHQGD----KSTR 249
           L  QPAACLSRTASSPSPSS+TNFS   W  LM P+   +D++FL     GD       +
Sbjct: 194 L--QPAACLSRTASSPSPSSETNFSVPPWSGLMTPR--PVDSIFLTS--DGDNNNNNPPK 247

Query: 250 NVKHHNLELQLLTTSNPIDVSDDSPKRDHDHNHSTQLQLSIGSSDISEKNELNVTYLSST 309
              +HNLELQLLTT NP+ V+  SPK   D NHSTQLQLSIGSSD +EKNE ++  L + 
Sbjct: 248 KAHYHNLELQLLTTPNPL-VALASPKA--DENHSTQLQLSIGSSDFNEKNESSIINLINK 304

Query: 310 TNGKP------------AMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQE 357
               P            A   A+RLKE+AREQLRLAM EK  AEEARQ AKRQIELA++E
Sbjct: 305 EYSAPARCPRECNTSEKATFGAARLKEEAREQLRLAMEEKVYAEEARQQAKRQIELADKE 364

Query: 358 FANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSRL-----PPDENS 412
           F +AKRIRQQAQAELDKAQALKEHA KQINSTIL++TCHACKQQF++R      PPDENS
Sbjct: 365 FTHAKRIRQQAQAELDKAQALKEHARKQINSTILQITCHACKQQFRTRTAGNVAPPDENS 424

Query: 413 LVLSYMSSATTEGE 426
           LVLSYMSSA TEGE
Sbjct: 425 LVLSYMSSAITEGE 438

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520699|ref|XP_003528998.1| PREDICTED: uncharacterized protein LOC100785333 [Glycine max]

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 324/469 (69%), Positives = 360/469 (76%), Gaps = 47/469 (10%)

Query: 1   MLANN-SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC 59
           MLANN SPS++P +SEPF C ENG + NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC
Sbjct: 1   MLANNLSPSSVP-TSEPFPCTENGTATNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC 59

Query: 60  EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVG 119
           EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP+CLHHDPCHALGDLVG
Sbjct: 60  EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVG 119

Query: 120 IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ 179
           IKKHFRRKHSNHKQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ
Sbjct: 120 IKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ 179

Query: 180 DACSKGHIRS-EQQGLQQQPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPT-IDTMF 237
           DAC+ G +R  E Q L  QP+ACLSRTASSPSPSS+TNFS + WP  M+ + P+   T+F
Sbjct: 180 DACNMGRLRPHESQPL--QPSACLSRTASSPSPSSETNFSTAPWPTRMIIQKPSETPTIF 237

Query: 238 LNR-------IHQGDKSTRNVKHHNLELQL----------------LTTSNPIDVSDDSP 274
           +N             KS   + H NL+LQL                   +NPID +  S 
Sbjct: 238 MNNPITAITTAETSSKSNNKLLHPNLDLQLSTPTNNNNSNTSNTNTSNIANPIDNAAISA 297

Query: 275 KRDHDH-NHSTQLQLSIGSSDISEKNELNVTYLSSTTNGKPAMDIAS------------R 321
           KRDH H NHST LQLSIGSSD+SEKN+ +    S  ++                     R
Sbjct: 298 KRDHYHENHSTHLQLSIGSSDMSEKNDQSNRNSSEKSSNNSNNINDQNNKQQSNNMALLR 357

Query: 322 LKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKEH 381
           ++EQARE LR+AMAEKA AEEAR+ AKRQIELAEQEF NAKRIRQQAQ ELDKA ALKEH
Sbjct: 358 VQEQAREHLRIAMAEKAYAEEARKQAKRQIELAEQEFTNAKRIRQQAQVELDKAYALKEH 417

Query: 382 AIKQINSTILRVTCHACKQQFQSR----LPPDENSLVLSYMSSA-TTEG 425
           A+KQINST+L++TCH CKQQFQ+R      PD+NSLVLSY+SSA TTEG
Sbjct: 418 AMKQINSTMLQITCHFCKQQFQARNATTTSPDDNSLVLSYVSSAITTEG 466

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531110|ref|XP_003534121.1| PREDICTED: uncharacterized protein LOC100800187 [Glycine max]

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 326/460 (70%), Positives = 361/460 (78%), Gaps = 39/460 (8%)

Query: 1   MLANN-SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC 59
           MLANN SPS++P +SEPF C ENG + NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC
Sbjct: 1   MLANNLSPSSVP-TSEPFPCTENGTATNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC 59

Query: 60  EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVG 119
           EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP+CLHHDPCHALGDLVG
Sbjct: 60  EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVG 119

Query: 120 IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ 179
           IKKHFRRKHSNHKQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ
Sbjct: 120 IKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ 179

Query: 180 DACSKGHIRSEQQGLQQQPAACLSRTASSPSPSSDTNFSASHWPN-LMVPKVPTIDTMFL 238
           DAC+ G +R E Q L  QP+ACLSRTASSPSPSS+TNFS + WP  +++PK     T+F+
Sbjct: 180 DACNMGRLRPESQPL--QPSACLSRTASSPSPSSETNFSTAPWPTRMIIPKPSEPPTIFM 237

Query: 239 NR-------IHQGDKSTRNVKHHNLELQL---------LTTSNPIDVSDDSPKRD---HD 279
           N             KS   + H NL+LQL            +N ID +  SPKRD   H 
Sbjct: 238 NNPITAITTAETSSKSNNKLLHPNLDLQLSTPTTTNNTSNVANRIDAA-ISPKRDHHHHH 296

Query: 280 HNHSTQLQLSIGSSDISEKNELNVTYLSSTTNGKPAMDIAS----------RLKEQAREQ 329
            NHST LQLSIGSSD+SEKNE N      ++N        +          R++EQARE 
Sbjct: 297 ENHSTHLQLSIGSSDMSEKNESNRNSSEKSSNSNINDQNNNNKQSNNMALLRVQEQAREH 356

Query: 330 LRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINST 389
           LR+AMAEKA AEEAR+ AKRQIELAEQEF NAKRIRQQAQAELDKA +LKEHA+KQINST
Sbjct: 357 LRIAMAEKAYAEEARKQAKRQIELAEQEFTNAKRIRQQAQAELDKAYSLKEHAMKQINST 416

Query: 390 ILRVTCHACKQQFQSR---LPPDENSLVLSYMSSA-TTEG 425
           +L++TCH CKQQFQ+R     PDENSLVLSY+SSA TTEG
Sbjct: 417 MLQITCHGCKQQFQARNAATTPDENSLVLSYVSSAITTEG 456

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424490|ref|XP_002285189.1| PREDICTED: uncharacterized protein LOC100262958 [Vitis vinifera] gi|147787378|emb|CAN60092.1| hypothetical protein VITISV_033421 [Vitis vinifera]

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/420 (69%), Positives = 328/420 (78%), Gaps = 25/420 (5%)

Query: 17  FSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHR 76
           F+ LENG+  NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHR
Sbjct: 19  FTSLENGVC-NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHR 77

Query: 77  RRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVC 136
           RRHKVPWKLLKRET  V+KRVFVCPEPSCLHHDP HALGDLVGIKKHFRRKHSNHKQWVC
Sbjct: 78  RRHKVPWKLLKRETQEVKKRVFVCPEPSCLHHDPLHALGDLVGIKKHFRRKHSNHKQWVC 137

Query: 137 EKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHIRSEQQGLQQ 196
           EKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC+   +R E Q LQ 
Sbjct: 138 EKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACAVRQVRPELQTLQ- 196

Query: 197 QPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFLNRIHQGDKSTRNVKHHNL 256
              AC SRTASS SPSSD NFS    P L +PK    +T+FL  + + + S  +++ HNL
Sbjct: 197 --PACSSRTASSTSPSSDNNFSRVQLPGLTLPK--PAETVFLC-LERNNPSPSDLQ-HNL 250

Query: 257 ELQLLTTSNPIDVSDDSPKRDHDHNHSTQLQLSIGSSDISEKNELNVTYLSST------- 309
           EL+LL + N          R+ D NH+T L+LSIGS +  E NE       ++       
Sbjct: 251 ELRLLPSPNTYS------SRNSDENHATHLKLSIGSCNSGEMNEPRCASGDASRSSPREM 304

Query: 310 TNGKPAMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQ 369
              +PA+  ASRLKE A EQL+LAMAEKA AEEAR+ AKRQIELAE EFANA+RIRQQAQ
Sbjct: 305 NTAEPAL-AASRLKELASEQLKLAMAEKASAEEARREAKRQIELAELEFANARRIRQQAQ 363

Query: 370 AELDKAQALKEHAIKQINSTILRVTCHACKQQFQSR---LPPDENSLVLSYMSSATTEGE 426
           AEL+KAQ LKE AIK+++STIL++TCHACK QFQ+     P DE SL +SYMSSA TEGE
Sbjct: 364 AELEKAQILKEQAIKKVSSTILQITCHACKHQFQATAAGAPSDETSLAMSYMSSALTEGE 423

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398713|gb|ADL36651.1| C3HL domain class transcription factor [Malus x domestica]

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 320/490 (65%), Positives = 354/490 (72%), Gaps = 70/490 (14%)

Query: 1   MLANNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE 60
           MLANNS S++P SS+PFSCLENG + NKRKRRPAGTPDPDAEVVSLSPKTLLESDRY+CE
Sbjct: 1   MLANNSSSSVP-SSDPFSCLENGHT-NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYICE 58

Query: 61  ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGI 120
           ICNQGFQRDQNLQMHRRRHKVPWKLLKRE+PVV+KRVFVCPEPSCLHHDPCHALGDLVGI
Sbjct: 59  ICNQGFQRDQNLQMHRRRHKVPWKLLKRESPVVKKRVFVCPEPSCLHHDPCHALGDLVGI 118

Query: 121 KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 180
           KKHFRRKHSNHKQWVC+KCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD
Sbjct: 119 KKHFRRKHSNHKQWVCDKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 178

Query: 181 ACSKGHIRSEQQGLQQQPAACLSRTASSPSPS-SDTNFS--ASHWP---NLMVPK-VPTI 233
           AC+   +R E Q L  QP ACLSRTASSPSPS SD NFS   S WP   N ++P   PT 
Sbjct: 179 ACNMDRVRPESQTL--QPGACLSRTASSPSPSCSDNNFSRAPSTWPPSNNSVLPHPSPTE 236

Query: 234 DTMFLNRI-------HQGDKSTRNVK--HHNLELQLLTTSN---PIDVSDDSPKRDHDHN 281
            T    +        HQ   S +N    H+NL+LQL TTSN   PI+    S KR  + N
Sbjct: 237 YTKLTLKNPPAHADHHQATLSKKNSSNAHYNLDLQLATTSNINIPINEVSVSSKR--EEN 294

Query: 282 HSTQLQLSIGSSDI-----------------------------SEKNELNVTYLSSTTN- 311
           HSTQLQLSIGS +                              +E  E      S+TTN 
Sbjct: 295 HSTQLQLSIGSCEFGGGGHSHQNKNIEQHSNIMIANQNYSPRENEMKERERESSSTTTNH 354

Query: 312 -------GKPAMDIAS----RLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFAN 360
                   KP +   +    RLKE+AREQLRLAMAEKA AEEARQ A R IELAE+EFAN
Sbjct: 355 HERDDDDQKPKLAATAAGVLRLKEEAREQLRLAMAEKAYAEEARQQAGRHIELAEKEFAN 414

Query: 361 AKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQF---QSRLPPDENSLVLSY 417
           AKRIRQQAQAELDKA ALKE AIK++NSTIL++TCHAC +QF         +++ LVLSY
Sbjct: 415 AKRIRQQAQAELDKAHALKEQAIKKVNSTILQITCHACNKQFIQGAHEAKTNQHCLVLSY 474

Query: 418 MSSATT-EGE 426
           MSSA   EG+
Sbjct: 475 MSSAIAFEGD 484

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486527|gb|ABK95103.1| unknown [Populus trichocarpa]

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/434 (66%), Positives = 335/434 (77%), Gaps = 22/434 (5%)

Query: 1   MLANNSPSAIPC-SSEPF-SCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYV 58
           ML + + S  P  SS+PF S L+NG++ NKRKR+PAGTPDPDAEVVSLSP+TLLESDRYV
Sbjct: 1   MLDSITTSTAPSPSSDPFTSSLDNGLT-NKRKRKPAGTPDPDAEVVSLSPRTLLESDRYV 59

Query: 59  CEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLV 118
           CEIC+QGFQRDQNLQMHRRRHKVPWKLLKRET  V+KRV+VCPEPSCLHHDPCHALGDLV
Sbjct: 60  CEICSQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKRVYVCPEPSCLHHDPCHALGDLV 119

Query: 119 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 178
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 120 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 179

Query: 179 QDACSKGHIRSEQQGLQQQPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFL 238
           QDAC+    + E Q L  QPAAC SRTASS SPSSD NFS    P + + K       + 
Sbjct: 180 QDACTVRRAQPELQAL--QPAACSSRTASSTSPSSDANFSIVPLPGIPMSKATEPVYFYS 237

Query: 239 NRIHQGDKSTRNVKHHNLELQLLTTSNPIDVSDDSPKRDHDHNHSTQLQLSIGSSDISEK 298
           +R    D ST   + HNLELQLL +S     S   P+ + D  ++T L+LSIGSSD  +K
Sbjct: 238 DR---NDASTSQ-QEHNLELQLLPSS-----STHFPQ-NPDEGYATNLKLSIGSSDSLKK 287

Query: 299 NELNVTYLSSTT---NGKPAMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAE 355
           NE     +  +      +P ++ A++L+E A EQLRLA+ EKA AEEARQ AKRQIE+AE
Sbjct: 288 NEQFKAIMDPSGPKRTYEPTLE-AAKLEEFANEQLRLAITEKAYAEEARQHAKRQIEMAE 346

Query: 356 QEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQ---SRLPPDENS 412
            EFANAKRIRQQAQAEL+KAQ L+E A K+I+STI++VTC ACK QF+   +    DE S
Sbjct: 347 LEFANAKRIRQQAQAELEKAQVLREQATKKISSTIMQVTCQACKLQFKLSTAAASADETS 406

Query: 413 LVLSYMSSATTEGE 426
           L +SYMSSATTEG+
Sbjct: 407 LAMSYMSSATTEGD 420

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099625|ref|XP_002311555.1| predicted protein [Populus trichocarpa] gi|222851375|gb|EEE88922.1| predicted protein [Populus trichocarpa]

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 282/432 (65%), Positives = 322/432 (74%), Gaps = 47/432 (10%)

Query: 1   MLANNSPSAIPC-SSEPFSC-LENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYV 58
           ML + + S  P  SS+PF+  L+NG++ NKRKR+PAGTPDPDAEVVSLSP+TLLESDRYV
Sbjct: 1   MLDSTTTSTAPSPSSDPFTTSLDNGVT-NKRKRKPAGTPDPDAEVVSLSPRTLLESDRYV 59

Query: 59  CEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLV 118
           CEICNQGFQRDQNLQMHRRRHKVPWKLLKRET  V+KRV+VCPEPSCLHHDPCHALGDLV
Sbjct: 60  CEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKRVYVCPEPSCLHHDPCHALGDLV 119

Query: 119 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 178
           GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 120 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 179

Query: 179 QDACSKGHIRSEQQGLQQQPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFL 238
           QDAC+   +R  Q  LQ    AC SRTASS SPSSD NF+ +  P + + K PT      
Sbjct: 180 QDACT---VRGAQPELQALQPACSSRTASSTSPSSDANFNIAPLPGIPMSK-PTEQVYLC 235

Query: 239 NRIHQGDKSTRNVKHHNLELQLL-TTSNPIDVSDDSPKRDHDHNHSTQLQLSIGSSDISE 297
           +   + D ST + + HNLELQLL ++SN +  + D P       H+  L+LSIGS     
Sbjct: 236 S--DRNDASTSSQQEHNLELQLLPSSSNHLPQNPDEP-------HAANLKLSIGS----- 281

Query: 298 KNELNVTYLSSTTNGKPAMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQE 357
                                 ++LKE   EQLRLAM EKA AEEARQ AKRQIE+AE E
Sbjct: 282 ----------------------TKLKEFTNEQLRLAMTEKAYAEEARQQAKRQIEMAELE 319

Query: 358 FANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSRL---PPDENSLV 414
           FANAKRIRQQAQ+EL+KAQ LKE A K+++STI++VTC  CKQQF +     P DE SL 
Sbjct: 320 FANAKRIRQQAQSELEKAQLLKEQATKKLSSTIMQVTCQVCKQQFHASTAAAPADETSLA 379

Query: 415 LSYMSSATTEGE 426
           +SYMSSATTEG+
Sbjct: 380 MSYMSSATTEGD 391

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737571|emb|CBI26772.3| unnamed protein product [Vitis vinifera]

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 283/413 (68%), Positives = 314/413 (76%), Gaps = 49/413 (11%)

Query: 17  FSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHR 76
           F+ LENG+  NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHR
Sbjct: 19  FTSLENGVC-NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHR 77

Query: 77  RRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVC 136
           RRHKVPWKLLKRET  V+KRVFVCPEPSCLHHDP HALGDLVGIKKHFRRKHSNHKQWVC
Sbjct: 78  RRHKVPWKLLKRETQEVKKRVFVCPEPSCLHHDPLHALGDLVGIKKHFRRKHSNHKQWVC 137

Query: 137 EKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHIRSEQQGLQQ 196
           EKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC+   +R E Q LQ 
Sbjct: 138 EKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACAVRQVRPELQTLQ- 196

Query: 197 QPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFLNRIHQGDKSTRNVKHHNL 256
              AC SRTASS SPSSD NFS    P L +PK    +T+FL  + + + S  +++ HNL
Sbjct: 197 --PACSSRTASSTSPSSDNNFSRVQLPGLTLPK--PAETVFLC-LERNNPSPSDLQ-HNL 250

Query: 257 ELQLLTTSNPIDVSDDSPKRDHDHNHSTQLQLSIGSSDISEKNELNVTYLSSTTNGKPAM 316
           EL+LL + N       SP+                        E+N          +PA+
Sbjct: 251 ELRLLPSPN-----TSSPR------------------------EMNT--------AEPAL 273

Query: 317 DIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQ 376
             ASRLKE A EQL+LAMAEKA AEEAR+ AKRQIELAE EFANA+RIRQQAQAEL+KAQ
Sbjct: 274 -AASRLKELASEQLKLAMAEKASAEEARREAKRQIELAELEFANARRIRQQAQAELEKAQ 332

Query: 377 ALKEHAIKQINSTILRVTCHACKQQFQSR---LPPDENSLVLSYMSSATTEGE 426
            LKE AIK+++STIL++TCHACK QFQ+     P DE SL +SYMSSA TEGE
Sbjct: 333 ILKEQAIKKVSSTILQITCHACKHQFQATAAGAPSDETSLAMSYMSSALTEGE 385

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	426
TAIR|locus:2041105	446	SGR5 "AT2G01940" [Arabidopsis	0.924	0.883	0.576	2.2e-114
TAIR|locus:2200196	419	IDD14 "AT1G68130" [Arabidopsis	0.413	0.420	0.837	2.7e-107
TAIR|locus:2032985	362	IDD16 "AT1G25250" [Arabidopsis	0.669	0.787	0.528	4.5e-75
TAIR|locus:2205672	455	IDD7 "AT1G55110" [Arabidopsis	0.361	0.338	0.647	2.3e-60
TAIR|locus:2024193	506	MGP "AT1G03840" [Arabidopsis t	0.361	0.304	0.651	2.3e-60
TAIR|locus:2204503	467	AT1G14580 "AT1G14580" [Arabido	0.361	0.329	0.6	6.1e-58
TAIR|locus:2143543	503	JKD "AT5G03150" [Arabidopsis t	0.420	0.355	0.571	7.8e-58
TAIR|locus:2173624	500	IDD1 "AT5G66730" [Arabidopsis	0.368	0.314	0.651	9.6e-57
TAIR|locus:2101739	452	IDD2 "AT3G50700" [Arabidopsis	0.406	0.382	0.595	1.2e-56
TAIR|locus:2051688	516	IDD4 "indeterminate(ID)-domain	0.361	0.298	0.606	6.8e-56

TAIR|locus:2041105 SGR5 "AT2G01940" [Arabidopsis thaliana (taxid:3702)]

 Score = 1128 (402.1 bits), Expect = 2.2e-114, P = 2.2e-114
 Identities = 253/439 (57%), Positives = 296/439 (67%)

Query:    13 SSEPF-SCLENGI-----SHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGF 66
             SS+PF S  ENG+     S  KRKRRPAGTPDPDAEVVSLSP+TLLESDRY+CEICNQGF
Sbjct:    23 SSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGF 82

Query:    67 QRDQNLQMHRRRHKVPWKLLKRETPV-VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFR 125
             QRDQNLQMHRRRHKVPWKLLKR+  + V+KRV+VCPEP+CLHH+PCHALGDLVGIKKHFR
Sbjct:    83 QRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFR 142

Query:   126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFS-RVESFIEHQDACSK 184
             RKHSNHKQWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCG   S RVESFIEHQD CS 
Sbjct:   143 RKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGFFSSFRVESFIEHQDNCSA 202

Query:   185 GHIRSEQQGLQQQPAACLXXXXXXXXXXXXXXXXXXHWPNLMVPKVPTIDTMFLNRIHQG 244
               +  E      Q A  +                  ++   +   V T   +    IHQ 
Sbjct:   203 RRVHREPPR-PPQTAVTVPACSSRTASTVSTPSSETNYGGTVA--VTTPQPLEGRPIHQR 259

Query:   245 DKS---TRNVKHHNLELQLLTTS---NPIDVSDDS----PKRDHDHNH-STQLQLSIGSS 293
               S   T +  + NLELQLL  S   NP   +       P   H+HNH +T L LSI  S
Sbjct:   260 ISSSILTNSSNNLNLELQLLPLSSNQNPNQENQQQKVKEPSHHHNHNHDTTNLNLSIAPS 319

Query:   294 DISEKNELNVTYLSSTTNGKPAMDIASRLKE-QAREQL-RLAMAEKACAEEARQAAKRQI 351
               S     N        N     D   R+KE  A EQ+ ++AM EKA AEEA++ AKRQ 
Sbjct:   320 --SSYQHYN--------N----FD---RIKEIMASEQIMKIAMKEKAYAEEAKREAKRQR 362

Query:   352 ELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSRLPP--- 408
             E+AE EFANAK+IRQ+AQAEL++A+ LKE ++K+I+STI++VTC  CK QFQ+   P   
Sbjct:   363 EIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKGQFQAVAVPAAT 422

Query:   409 -DENSLVLSYMSSATTEGE 426
              DE SLV+SYMSSA T+GE
Sbjct:   423 ADETSLVVSYMSSANTDGE 441

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009590 "detection of gravity" evidence=IMP

GO:0010031 "circumnutation" evidence=IMP

GO:2000904 "regulation of starch metabolic process" evidence=IMP

GO:0009958 "positive gravitropism" evidence=IMP

GO:0009959 "negative gravitropism" evidence=IMP

TAIR|locus:2200196 IDD14 "AT1G68130" [Arabidopsis thaliana (taxid:3702)]

 Score = 827 (296.2 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
 Identities = 149/178 (83%), Positives = 160/178 (89%)

Query:    22 NGIS-HNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHK 80
             NG +   KRKRRPAGTPDP+AEVVSLSP+TLLESDRYVCEICNQGFQRDQNLQMHRRRHK
Sbjct:    34 NGTAVTQKRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHK 93

Query:    81 VPWKLLKRET-PVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC 139
             VPWKLLKRET   VRKRV+VCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHKQW+CE+C
Sbjct:    94 VPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERC 153

Query:   140 SKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSKGHIRSEQQGLQQQ 197
             SKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C+    +     L +Q
Sbjct:   154 SKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCTVRRSQPSNHRLHEQ 211

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0043621 "protein self-association" evidence=IPI

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:2000904 "regulation of starch metabolic process" evidence=IMP

TAIR|locus:2032985 IDD16 "AT1G25250" [Arabidopsis thaliana (taxid:3702)]

 Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
 Identities = 158/299 (52%), Positives = 189/299 (63%)

Query:    38 DPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETP--VVRK 95
             DPDAEVVSLSP+TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR+     VRK
Sbjct:    20 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRK 79

Query:    96 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT 155
             RV+VCPEP+CLHHDPCHALGDLVGIKKHFRRKHS HKQWVCE+CSKGYAVQSDYKAHLKT
Sbjct:    80 RVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT 139

Query:   156 CGTRGHSCDCGRVFSRVESFIEHQDACSKGHIR-SEQQGLQQQPAACLXXXXXXXXXXXX 214
             CG+RGHSCDCGRVFSRVESFIEHQD C+    + +  + LQQ     +            
Sbjct:   140 CGSRGHSCDCGRVFSRVESFIEHQDTCTIRQPQPTNHRHLQQHT---MGLDAPSRTTSTA 196

Query:   215 XXXXXXHWPNLMVPKVPTIDTMFLNRIHQGDKSTRNVKHHNLELQLLTTSNPIDVSDDSP 274
                   H   L+ P  P+      +       +  +    +LELQL      I ++  S 
Sbjct:   197 SFGPLLHGLPLLRPPRPSNQH---SPAFAYPFNASSAPFESLELQL-----SIGMARTSA 248

Query:   275 KRDHDHNHSTQLQLSIGSSDISEKNELNVTYLSSTTNGKPAMDIASRLKEQAREQLRLA 333
             +  H+    T L     + +  +  E            +   + A R++E+A+ +L  A
Sbjct:   249 QARHNEKRETSLTKERANEEARKAEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKA 307

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

TAIR|locus:2205672 IDD7 "AT1G55110" [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
 Identities = 101/156 (64%), Positives = 125/156 (80%)

Query:    28 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 87
             KRKR   G PDP+AEV++LSPKTL+ ++R++CE+CN+GFQRDQNLQ+H+R H +PWKL +
Sbjct:    63 KRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQ 122

Query:    88 RETP-VVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQ 146
             R    VVRK+V+VCPEP C+HH P  ALGDL GIKKHF RKH   K+W CEKCSK YAVQ
Sbjct:   123 RSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGE-KKWKCEKCSKKYAVQ 181

Query:   147 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 182
             SD+KAH KTCGT+ + CDCG +FSR +SFI H+  C
Sbjct:   182 SDWKAHAKTCGTKEYKCDCGTLFSRRDSFITHRAFC 217

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2024193 MGP "AT1G03840" [Arabidopsis thaliana (taxid:3702)]

 Score = 580 (209.2 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
 Identities = 101/155 (65%), Positives = 124/155 (80%)

Query:    28 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 87
             K+KR   G PDP+AEV++LSPKTL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +
Sbjct:    41 KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 100

Query:    88 RETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 147
             R +  VRKRV+VCPE SC+HH P  ALGDL GIKKHF RKH   K+W CEKC+K YAVQS
Sbjct:   101 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGE-KKWKCEKCAKRYAVQS 159

Query:   148 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 182
             D+KAH KTCGTR + CDCG +FSR +SFI H+  C
Sbjct:   160 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFC 194

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2204503 AT1G14580 "AT1G14580" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
 Identities = 93/155 (60%), Positives = 126/155 (81%)

Query:    28 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 87
             K++R   G P+PDAEV++LSPKT++ ++R++CE+CN+GFQR+QNLQ+HRR H +PWKL +
Sbjct:    53 KKRRNQPGNPNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 112

Query:    88 RETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 147
             +    VR++V++CPEPSC+HHDP  ALGDL GIKKH+ RKH   K+W C+KCSK YAVQS
Sbjct:   113 KSNKEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHGE-KKWKCDKCSKRYAVQS 171

Query:   148 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 182
             D+KAH KTCGT+ + CDCG +FSR +S+I H+  C
Sbjct:   172 DWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFC 206

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2143543 JKD "AT5G03150" [Arabidopsis thaliana (taxid:3702)]

 Score = 575 (207.5 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
 Identities = 104/182 (57%), Positives = 133/182 (73%)

Query:     2 LANNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI 61
             L    P   P +S P    +   S  K+KR   GTPDPDA+V++LSP TL+ ++R+VCEI
Sbjct:    28 LQQQIPDLNP-NSNPNPNAKPNSSSAKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEI 86

Query:    62 CNQGFQRDQNLQMHRRRHKVPWKLLKR-ETPVVRKRVFVCPEPSCLHHDPCHALGDLVGI 120
             CN+GFQRDQNLQ+HRR H +PWKL +R +  V++K+V++CP  +C+HHD   ALGDL GI
Sbjct:    87 CNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGI 146

Query:   121 KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 180
             KKH+ RKH   K+W CEKCSK YAVQSD+KAH KTCGTR + CDCG +FSR +SFI H+ 
Sbjct:   147 KKHYSRKHGE-KKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRA 205

Query:   181 AC 182
              C
Sbjct:   206 FC 207

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0010075 "regulation of meristem growth" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0048364 "root development" evidence=IMP

GO:0051302 "regulation of cell division" evidence=IMP

GO:0045604 "regulation of epidermal cell differentiation" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2173624 IDD1 "AT5G66730" [Arabidopsis thaliana (taxid:3702)]

 Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
 Identities = 103/158 (65%), Positives = 124/158 (78%)

Query:    25 SHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK 84
             S  K+KR   G PDPDAEV++LSPKTL+ ++R+VCEICN+GFQRDQNLQ+HRR H +PWK
Sbjct:    29 SVGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK 88

Query:    85 LLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYA 144
             L +R T  VRK+V+VCP   C+HHDP  ALGDL GIKKHF RKH   K+W CEKCSK YA
Sbjct:    89 LRQRSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGE-KKWKCEKCSKKYA 147

Query:   145 VQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 182
             VQSD+KAH K CGT+ + CDCG +FSR +SFI H+  C
Sbjct:   148 VQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFC 185

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0009937 "regulation of gibberellic acid mediated signaling pathway" evidence=IMP

GO:0010029 "regulation of seed germination" evidence=IMP

GO:0010431 "seed maturation" evidence=IMP

TAIR|locus:2101739 IDD2 "AT3G50700" [Arabidopsis thaliana (taxid:3702)]

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 106/178 (59%), Positives = 135/178 (75%)

Query:    25 SHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK 84
             S  K+KR   G PDP++EV++LSPKTLL ++R+VCEICN+GFQRDQNLQ+HRR H +PWK
Sbjct:    31 STGKKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK 90

Query:    85 LLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYA 144
             L ++    V+K+V+VCPE SC+HHDP  ALGDL GIKKHF RKH   K+W C+KCSK YA
Sbjct:    91 LRQKSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGE-KKWKCDKCSKKYA 149

Query:   145 VQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQ---DACSKGHIRSEQ-QGLQQQP 198
             VQSD+KAH K CGT+ + CDCG +FSR +SFI H+   DA ++ + RS   Q  +Q P
Sbjct:   150 VQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEENARSHHSQSKKQNP 207

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2051688 IDD4 "indeterminate(ID)-domain 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 94/155 (60%), Positives = 127/155 (81%)

Query:    28 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 87
             K++R   G P+PDAEVV+LSPKTL+ ++R++C++CN+GFQR+QNLQ+HRR H +PWKL +
Sbjct:    54 KKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQ 113

Query:    88 RETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 147
             + T  V+++V++CPEP+C+HHDP  ALGDL GIKKH+ RKH   K+W CEKCSK YAVQS
Sbjct:   114 KSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGE-KKWKCEKCSKRYAVQS 172

Query:   148 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 182
             D+KAH KTCGT+ + CDCG +FSR +S+I H+  C
Sbjct:   173 DWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFC 207

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	426
COG0711	161	COG0711, AtpF, F0F1-type ATP synthase, subunit b [	3e-04
PRK05759	156	PRK05759, PRK05759, F0F1 ATP synthase subunit B; V	5e-04
COG2268	548	COG2268, COG2268, Uncharacterized protein conserve	5e-04
COG3064	387	COG3064, TolA, Membrane protein involved in colici	0.001
COG0711	161	COG0711, AtpF, F0F1-type ATP synthase, subunit b [	0.002
PRK01558	198	PRK01558, PRK01558, V-type ATP synthase subunit E;	0.002
COG0711	161	COG0711, AtpF, F0F1-type ATP synthase, subunit b [	0.003
pfam13868	349	pfam13868, Trichoplein, Tumour suppressor, Mitosta	0.003
COG1566	352	COG1566, EmrA, Multidrug resistance efflux pump [D	0.003
COG0845	372	COG0845, AcrA, Membrane-fusion protein [Cell envel	0.004

>gnl|CDD|223783 COG0711, AtpF, F0F1-type ATP synthase, subunit b [Energy production and conversion]

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 8/77 (10%)

Query: 319 ASRLKEQAREQLRLAMAE----KACAEEARQAAKRQIELAEQEF---ANAKRIRQQAQAE 371
           A RLKE+A+  L     E    +  A E  + AK++ E   +E    A  +  R +  AE
Sbjct: 49  AERLKEEAQALLAEYEQELEEAREQASEIIEQAKKEAEQIAEEIKAEAEEELERIKEAAE 108

Query: 372 LDKAQALKEHAIKQINS 388
            +     KE A++++ +
Sbjct: 109 AEIEAE-KERALEELRA 124

Length = 161

>gnl|CDD|180240 PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated

 Score = 40.1 bits (95), Expect = 5e-04
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 16/72 (22%)

Query: 319 ASRLKEQAREQLRLAMAE--------KACAEEARQAAKRQIELAEQEFANAKRIRQQAQA 370
               + +   QL  A AE        K  A +  + AK +   AE E   A RI+ QAQA
Sbjct: 54  LELAQAKYEAQLAEARAEAAEIIEQAKKRAAQIIEEAKAE---AEAE---AARIKAQAQA 107

Query: 371 ELD--KAQALKE 380
           E++  + +A +E
Sbjct: 108 EIEQERKRAREE 119

Length = 156

>gnl|CDD|225177 COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 41.7 bits (98), Expect = 5e-04
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 321 RLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKE 380
              E+A +   +A AE A  E+   A + +   AE E A A  I+ +A+A  +K +A  E
Sbjct: 380 EEAERAEQAALVAAAEAAEQEQVEIAVRAEAAKAEAE-AQAAEIKAEAEAIREKGKAEAE 438

Query: 381 HAIKQINSTI 390
            A + +   I
Sbjct: 439 -AKRALAEAI 447

Length = 548

>gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane]

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 321 RLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKE 380
           RLK+  +E+L+    +K   E  +QA   Q +  EQ    A    Q+ +AE  KA+A  E
Sbjct: 102 RLKQLEKERLKAQEQQKQAEEAEKQAQLEQKQQEEQARKAA--AEQKKKAEAAKAKAAAE 159

Query: 381 HA 382
            A
Sbjct: 160 AA 161

Length = 387

>gnl|CDD|223783 COG0711, AtpF, F0F1-type ATP synthase, subunit b [Energy production and conversion]

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 10/72 (13%)

Query: 319 ASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAEL-----D 373
           AS + EQA+++      E     EA +  +R  E AE E    K    +A  EL     +
Sbjct: 74  ASEIIEQAKKEAEQIAEEIK--AEAEEELERIKEAAEAEIEAEKE---RALEELRAEVAE 128

Query: 374 KAQALKEHAIKQ 385
            A A+ E  + +
Sbjct: 129 LAVAIAEKLLGK 140

Length = 161

>gnl|CDD|179302 PRK01558, PRK01558, V-type ATP synthase subunit E; Provisional

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 332 LAMAEKACAE---EARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQ 385
           L  AE+   E   EA++ A+  I  AE+E   AK ++ +A+ E +  +     A +Q
Sbjct: 17  LEEAERLANEIILEAKEEAEEIIAKAEEE---AKELKAKAEKEANDYKRHALEASRQ 70

Length = 198

>gnl|CDD|223783 COG0711, AtpF, F0F1-type ATP synthase, subunit b [Energy production and conversion]

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 7/57 (12%)

Query: 340 AEEARQAAKRQIELAEQEFANAKR----IRQQAQAELDKAQALKEHAIKQINSTILR 392
           AE  ++ A+  +   EQE   A+     I +QA+ E   A+ + E    +    + R
Sbjct: 49  AERLKEEAQALLAEYEQELEEAREQASEIIEQAKKE---AEQIAEEIKAEAEEELER 102

Length = 161

>gnl|CDD|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin

 Score = 39.5 bits (93), Expect = 0.003
 Identities = 13/72 (18%), Positives = 30/72 (41%)

Query: 321 RLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKE 380
           +  E    +   A   +    E R+  ++QIE  E+  A  +    +    L + +A ++
Sbjct: 267 KQAEDEELEQENAEKRRMKRLEHRRELEQQIEEKEERRAAEREEELEEGERLREEEAERQ 326

Query: 381 HAIKQINSTILR 392
             I++    +L+
Sbjct: 327 ARIEEERQRLLK 338

Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). Length = 349

>gnl|CDD|224482 COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 313 KPAMDIASRLKEQAREQLRLAMA--EKACAEEARQA---AKRQIELAEQEFANAKRIRQQ 367
           + A+  A       R QL  A A   +A A++  QA    +R+ ELA Q    ++    +
Sbjct: 97  EAALAAAEAQLRNLRAQLASAQALIAQAEAQDLDQAQNELERRAELA-QRGVVSREELDR 155

Query: 368 AQAELDKAQALKEHAIKQINSTI 390
           A+A L  A+A    A       +
Sbjct: 156 ARAALQAAEAALAAAQAAQKQNL 178

Length = 352

>gnl|CDD|223914 COG0845, AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 2/87 (2%)

Query: 306 LSSTTNGKPAMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFANAKRIR 365
           L  +   + A+D A     +A+  L  A       +   + A  +  +++ E   A+ + 
Sbjct: 97  LDPSAVLQAALDQAEAQLARAQALLAPAELGDL--QREAKLAAEKAAVSQAELDAAQALL 154

Query: 366 QQAQAELDKAQALKEHAIKQINSTILR 392
           + A+A ++ AQA    A   +  T + 
Sbjct: 155 RAAEALVEAAQAALASAKLNLEYTRIT 181

Length = 372

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	426
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.93
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.84
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.76
KOG3608	467	consensus Zn finger proteins [General function pre	99.68
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.66
KOG3576	267	consensus Ovo and related transcription factors [T	99.65
KOG3576	267	consensus Ovo and related transcription factors [T	99.58
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.41
KOG3608	467	consensus Zn finger proteins [General function pre	99.38
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.37
PLN03086	567	PRLI-interacting factor K; Provisional	99.22
PHA00733	128	hypothetical protein	98.86
PLN03086	567	PRLI-interacting factor K; Provisional	98.82
PHA00733	128	hypothetical protein	98.74
PHA02768	55	hypothetical protein; Provisional	98.57
KOG3993	500	consensus Transcription factor (contains Zn finger	98.46
PHA02768	55	hypothetical protein; Provisional	98.33
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.14
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.05
KOG3993	500	consensus Transcription factor (contains Zn finger	97.93
PHA00616	44	hypothetical protein	97.8
PHA00732	79	hypothetical protein	97.73
PHA00616	44	hypothetical protein	97.73
PHA00732	79	hypothetical protein	97.6
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.59
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.53
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.53
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.47
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.12
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.06
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.02
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.97
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.51
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.4
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.3
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.26
smart00355	26	ZnF_C2H2 zinc finger.	96.1
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	95.87
COG5048	467	FOG: Zn-finger [General function prediction only]	95.84
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.53
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.53
smart00355	26	ZnF_C2H2 zinc finger.	94.91
KOG1146	1406	consensus Homeobox protein [General function predi	94.6
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.55
PRK04860	160	hypothetical protein; Provisional	94.11
PRK04860	160	hypothetical protein; Provisional	94.09
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	93.68
COG5048	467	FOG: Zn-finger [General function prediction only]	93.48
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	93.46
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	92.27
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.18
PRK06568	154	F0F1 ATP synthase subunit B; Validated	92.17
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	91.58
KOG2186	276	consensus Cell growth-regulating nucleolar protein	90.99
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	90.41
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	89.27
KOG1146	1406	consensus Homeobox protein [General function predi	89.18
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	88.33
PRK14471	164	F0F1 ATP synthase subunit B; Provisional	87.96
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	87.36
PRK14475	167	F0F1 ATP synthase subunit B; Provisional	87.02
PRK06568	154	F0F1 ATP synthase subunit B; Validated	86.8
TIGR03825	255	FliH_bacil flagellar assembly protein FliH. This b	86.8
PRK07352	174	F0F1 ATP synthase subunit B; Validated	86.79
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	86.69
PRK14472	175	F0F1 ATP synthase subunit B; Provisional	86.67
COG5236	493	Uncharacterized conserved protein, contains RING Z	86.54
COG5236	493	Uncharacterized conserved protein, contains RING Z	86.53
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	86.46
PRK09174	204	F0F1 ATP synthase subunit B'; Validated	86.23
PRK06231	205	F0F1 ATP synthase subunit B; Validated	85.8
TIGR03321	246	alt_F1F0_F0_B alternate F1F0 ATPase, F0 subunit B.	85.74
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	85.52
PF06188	191	HrpE: HrpE/YscL/FliH and V-type ATPase subunit E;	83.95
TIGR02499	166	HrpE_YscL_not type III secretion apparatus protein	83.79
PRK05759	156	F0F1 ATP synthase subunit B; Validated	82.59
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	82.43
CHL00019	184	atpF ATP synthase CF0 B subunit	82.39
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	82.2
PRK06569	155	F0F1 ATP synthase subunit B'; Validated	82.03
COG1198	730	PriA Primosomal protein N' (replication factor Y)	81.81
PRK08475	167	F0F1 ATP synthase subunit B; Validated	81.54
CHL00118	156	atpG ATP synthase CF0 B' subunit; Validated	81.47
COG4049	65	Uncharacterized protein containing archaeal-type C	81.1
PRK14473	164	F0F1 ATP synthase subunit B; Provisional	80.89
KOG2893	341	consensus Zn finger protein [General function pred	80.62
PRK13453	173	F0F1 ATP synthase subunit B; Provisional	80.6
COG1592	166	Rubrerythrin [Energy production and conversion]	80.37

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.93  E-value=6.7e-27  Score=216.13  Aligned_cols=136  Identities=23%  Similarity=0.461  Sum_probs=122.9

Q ss_pred             CCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccc
Q 037502           14 SEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVV   93 (426)
Q Consensus        14 ~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~   93 (426)
                      .-.|+|.+|||.+....+|-.|.+.|..-         ...+.+.|++|||.|.....|++|+|+|              
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~---------~s~ka~~C~~C~K~YvSmpALkMHirTH--------------  184 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSL---------DSKKAFSCKYCGKVYVSMPALKMHIRTH--------------  184 (279)
T ss_pred             CCceeccccccccccccccchhhcccccc---------cccccccCCCCCceeeehHHHhhHhhcc--------------
Confidence            34699999999999999977777766432         1246799999999999999999999999              


Q ss_pred             cCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHHc-CCCCeecc-CCcccCC
Q 037502           94 RKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTC-GTRGHSCD-CGRVFSR  171 (426)
Q Consensus        94 ~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h-~~kp~~C~-Cgk~F~~  171 (426)
                       .-+++|.+||       |.|.+..-|+-|+ |+|+|||||.|..|+|+|++.++|+.||+|| +.|+|.|. |+|+|..
T Consensus       185 -~l~c~C~iCG-------KaFSRPWLLQGHi-RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl  255 (279)
T KOG2462|consen  185 -TLPCECGICG-------KAFSRPWLLQGHI-RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFAL  255 (279)
T ss_pred             -CCCccccccc-------ccccchHHhhccc-ccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHH
Confidence             4689999999       9999999999995 8999999999999999999999999999996 89999996 9999999


Q ss_pred             hhhHHHHHHH
Q 037502          172 VESFIEHQDA  181 (426)
Q Consensus       172 ~~~L~~H~r~  181 (426)
                      .+.|.+|...
T Consensus       256 ~SyLnKH~ES  265 (279)
T KOG2462|consen  256 KSYLNKHSES  265 (279)
T ss_pred             HHHHHHhhhh
Confidence            9999999875

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.84  E-value=1.2e-21  Score=181.48  Aligned_cols=116  Identities=27%  Similarity=0.426  Sum_probs=103.7

Q ss_pred             CCCCCCCCC---CCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccC
Q 037502            5 NSPSAIPCS---SEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKV   81 (426)
Q Consensus         5 ~~~~~~~~~---~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~   81 (426)
                      ..|...|..   .+.|.|++|||.|..-..|.+|            ++||+  -+++|.+|||.|.+...|+-|+|+|  
T Consensus       147 srHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMH------------irTH~--l~c~C~iCGKaFSRPWLLQGHiRTH--  210 (279)
T KOG2462|consen  147 SRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMH------------IRTHT--LPCECGICGKAFSRPWLLQGHIRTH--  210 (279)
T ss_pred             chhhcccccccccccccCCCCCceeeehHHHhhH------------hhccC--CCcccccccccccchHHhhcccccc--
Confidence            567777654   5689999999999998875555            45555  5899999999999999999999999  


Q ss_pred             ccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH
Q 037502           82 PWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus        82 ~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                                 +|||||.|+.|+       +.|.+.++|..| +.+|++.|+|.|..|+|.|+..+.|.+|...
T Consensus       211 -----------TGEKPF~C~hC~-------kAFADRSNLRAH-mQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  211 -----------TGEKPFSCPHCG-------KAFADRSNLRAH-MQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             -----------cCCCCccCCccc-------chhcchHHHHHH-HHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence                       899999999999       999999999999 5899999999999999999999999999887

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.76  E-value=9.4e-20  Score=188.84  Aligned_cols=85  Identities=20%  Similarity=0.470  Sum_probs=75.5

Q ss_pred             ceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHHcCCCC-----eecc----CCc
Q 037502           97 VFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRG-----HSCD----CGR  167 (426)
Q Consensus        97 ~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~kp-----~~C~----Cgk  167 (426)
                      +..|-+|-       ++..-.+.|+.|+ |+|+|||||+|.+||++|+.+.+|+.|+-+|.-+|     |.|.    |-+
T Consensus       605 PNqCiiC~-------rVlSC~saLqmHy-rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~  676 (958)
T KOG1074|consen  605 PNQCIICL-------RVLSCPSALQMHY-RTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQK  676 (958)
T ss_pred             ccceeeee-------ecccchhhhhhhh-hcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcc
Confidence            57888887       8999999999996 89999999999999999999999999999986654     7884    999


Q ss_pred             ccCChhhHHHHHHHhcCCCCCC
Q 037502          168 VFSRVESFIEHQDACSKGHIRS  189 (426)
Q Consensus       168 ~F~~~~~L~~H~r~h~~~~~~~  189 (426)
                      .|.....|..|+++|.++....
T Consensus       677 kftn~V~lpQhIriH~~~~~s~  698 (958)
T KOG1074|consen  677 KFTNAVTLPQHIRIHLGGQISN  698 (958)
T ss_pred             cccccccccceEEeecCCCCCC
Confidence            9999999999999998765443

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.68  E-value=8.7e-18  Score=159.36  Aligned_cols=150  Identities=18%  Similarity=0.366  Sum_probs=131.4

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK   84 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~   84 (426)
                      ..|.+.|+++|--.|+.||..|+++..|..|.++          ++-....+|.|..|.|.|.++..|++|++.|     
T Consensus       196 reH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rR----------qt~l~~n~fqC~~C~KrFaTeklL~~Hv~rH-----  260 (467)
T KOG3608|consen  196 REHIRTHSNEKVVACPHCGELFRTKTKLFDHLRR----------QTELNTNSFQCAQCFKRFATEKLLKSHVVRH-----  260 (467)
T ss_pred             HHHHHhcCCCeEEecchHHHHhccccHHHHHHHh----------hhhhcCCchHHHHHHHHHhHHHHHHHHHHHh-----
Confidence            4678889999999999999999999987777643          2333445899999999999999999999999     


Q ss_pred             cccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHHcCCCCeecc
Q 037502           85 LLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCD  164 (426)
Q Consensus        85 ~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~kp~~C~  164 (426)
                                ..-|+|+.|+       -+.+..+.|..|++-.|+.+|||+|+.|++.|.+.++|.+|..+|.+--|.|+
T Consensus       261 ----------vn~ykCplCd-------mtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~  323 (467)
T KOG3608|consen  261 ----------VNCYKCPLCD-------MTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCE  323 (467)
T ss_pred             ----------hhcccccccc-------cCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecC
Confidence                      5689999988       88889999999998899999999999999999999999999999888889994


Q ss_pred             ---CCcccCChhhHHHHHHHhcCCC
Q 037502          165 ---CGRVFSRVESFIEHQDACSKGH  186 (426)
Q Consensus       165 ---Cgk~F~~~~~L~~H~r~h~~~~  186 (426)
                         |..+|.....+++|++.++.+.
T Consensus       324 h~~C~~s~r~~~q~~~H~~evhEg~  348 (467)
T KOG3608|consen  324 HPDCHYSVRTYTQMRRHFLEVHEGN  348 (467)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhccCC
Confidence               9999999999999998876443

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.66  E-value=2.4e-17  Score=171.12  Aligned_cols=56  Identities=21%  Similarity=0.453  Sum_probs=51.9

Q ss_pred             cccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHhcCCCCCC
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDACSKGHIRS  189 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~~~~~  189 (426)
                      +.|.+||+.|.....|..|+++ +|+|||.|. |++.|..+.+|+.||.+|....+.+
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~s  937 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPS  937 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCc
Confidence            7899999999999999999999 599999998 9999999999999999998776544

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.65  E-value=4.5e-17  Score=143.93  Aligned_cols=111  Identities=23%  Similarity=0.525  Sum_probs=102.0

Q ss_pred             CCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQ  133 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~  133 (426)
                      ...|.|.+|||.|....-|.+|++-|             ...+.|-|..||       +.|.+.+.|++| .|+|+|-+|
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch-------------~~vkr~lct~cg-------kgfndtfdlkrh-~rthtgvrp  173 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCH-------------SDVKRHLCTFCG-------KGFNDTFDLKRH-TRTHTGVRP  173 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhc-------------cHHHHHHHhhcc-------Ccccchhhhhhh-hccccCccc
Confidence            46699999999999999999999999             678899999999       999999999999 599999999


Q ss_pred             cccccCCCcccChhhHHHHHHH-cCC-----------CCeecc-CCcccCChhhHHHHHHHhcCC
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKT-CGT-----------RGHSCD-CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~-h~~-----------kp~~C~-Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      |+|..|+|+|++.-+|..|++. ||.           |.|.|+ ||.+-.....+..|++.|+-.
T Consensus       174 ykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  174 YKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             cchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            9999999999999999999998 853           679995 999999999999999987543

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.58  E-value=2.9e-16  Score=138.80  Aligned_cols=114  Identities=24%  Similarity=0.471  Sum_probs=102.8

Q ss_pred             CCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCc
Q 037502           12 CSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETP   91 (426)
Q Consensus        12 ~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~   91 (426)
                      .+...|.|.+|||.|....-            |.+|++-|...+.|-|..|||+|...-.|++|+|+|            
T Consensus       113 sd~d~ftCrvCgK~F~lQRm------------lnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rth------------  168 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRM------------LNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTH------------  168 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHH------------HHHHhhhccHHHHHHHhhccCcccchhhhhhhhccc------------
Confidence            34557999999999988774            778888888889999999999999999999999999            


Q ss_pred             cccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhC----------CCCccccccCCCcccChhhHHHHHHH-cC
Q 037502           92 VVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHS----------NHKQWVCEKCSKGYAVQSDYKAHLKT-CG  157 (426)
Q Consensus        92 ~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~----------~~k~~~C~~C~k~f~~~~~L~~H~~~-h~  157 (426)
                       +|.+||+|..|+       +.|...-.|..|++++|.          ..|-|+|+.||..-.....+..|++. |.
T Consensus       169 -tgvrpykc~~c~-------kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  169 -TGVRPYKCSLCE-------KAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             -cCccccchhhhh-------HHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence             899999999999       999999999999998885          36789999999999999999999998 53

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.41  E-value=8.2e-14  Score=142.87  Aligned_cols=107  Identities=22%  Similarity=0.524  Sum_probs=93.4

Q ss_pred             ccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhC------
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHS------  129 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~------  129 (426)
                      ...|..|+++|.+...|+.|++.-+.           ..+..|.|..|.       .+|.....|.+|+ .+|.      
T Consensus       210 lltcpycdrgykrltslkeHikyrhe-----------kne~nfsC~lCs-------ytFAyRtQLErhm-~~hkpg~dqa  270 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHE-----------KNEPNFSCMLCS-------YTFAYRTQLERHM-QLHKPGGDQA  270 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHh-----------hCCCCCcchhhh-------hhhhhHHHHHHHH-HhhcCCCccc
Confidence            36799999999999999999874321           456679999998       9999999999995 5663      


Q ss_pred             -------CCCccccccCCCcccChhhHHHHHHHc-CCCCeecc-CCcccCChhhHHHHHHH
Q 037502          130 -------NHKQWVCEKCSKGYAVQSDYKAHLKTC-GTRGHSCD-CGRVFSRVESFIEHQDA  181 (426)
Q Consensus       130 -------~~k~~~C~~C~k~f~~~~~L~~H~~~h-~~kp~~C~-Cgk~F~~~~~L~~H~r~  181 (426)
                             +.+.|+|.+|||+|..+-.|+.|+|+| |+|||.|. |+|.|+...++..||-.
T Consensus       271 ~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  271 ISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             ccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence                   246799999999999999999999996 99999996 99999999999999853

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.38  E-value=1.3e-13  Score=131.20  Aligned_cols=138  Identities=19%  Similarity=0.328  Sum_probs=118.7

Q ss_pred             CCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccc
Q 037502           14 SEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVV   93 (426)
Q Consensus        14 ~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~   93 (426)
                      ..+|.|..|.|.|....-|.+|++.|            ..  -|+|+.|+.+....+.|..|++.-|            .
T Consensus       235 ~n~fqC~~C~KrFaTeklL~~Hv~rH------------vn--~ykCplCdmtc~~~ssL~~H~r~rH------------s  288 (467)
T KOG3608|consen  235 TNSFQCAQCFKRFATEKLLKSHVVRH------------VN--CYKCPLCDMTCSSASSLTTHIRYRH------------S  288 (467)
T ss_pred             CCchHHHHHHHHHhHHHHHHHHHHHh------------hh--cccccccccCCCChHHHHHHHHhhh------------c
Confidence            35999999999999999766665433            32  5999999999999999999999665            6


Q ss_pred             cCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCcccccc--CCCcccChhhHHHHHHH-c---CCCCeecc-CC
Q 037502           94 RKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK--CSKGYAVQSDYKAHLKT-C---GTRGHSCD-CG  166 (426)
Q Consensus        94 ~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-h---~~kp~~C~-Cg  166 (426)
                      .+|||+|..|+       ..|.+.+.|.+|. .+|+ +-.|.|+.  |..+|.....+++|++- |   ..-+|.|. |.
T Consensus       289 ~dkpfKCd~Cd-------~~c~~esdL~kH~-~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cd  359 (467)
T KOG3608|consen  289 KDKPFKCDECD-------TRCVRESDLAKHV-QVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCD  359 (467)
T ss_pred             cCCCccccchh-------hhhccHHHHHHHH-Hhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecch
Confidence            79999999998       9999999999996 5887 77899987  99999999999999998 6   34569996 99


Q ss_pred             cccCChhhHHHHHHHhcCCC
Q 037502          167 RVFSRVESFIEHQDACSKGH  186 (426)
Q Consensus       167 k~F~~~~~L~~H~r~h~~~~  186 (426)
                      +.|.+-.+|..|+..-++-+
T Consensus       360 r~ft~G~~L~~HL~kkH~f~  379 (467)
T KOG3608|consen  360 RFFTSGKSLSAHLMKKHGFR  379 (467)
T ss_pred             hhhccchhHHHHHHHhhccc
Confidence            99999999999987655544

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.37  E-value=1.3e-13  Score=141.47  Aligned_cols=77  Identities=22%  Similarity=0.559  Sum_probs=43.2

Q ss_pred             CcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHHc-CCCCeecc-CCcccCCh
Q 037502           95 KRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTC-GTRGHSCD-CGRVFSRV  172 (426)
Q Consensus        95 ~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h-~~kp~~C~-Cgk~F~~~  172 (426)
                      +.+|.|+.|+       +.|...+.|.+| +-.|+|.+||.|.+|.|+|..+-.|..|+|.| |+|||.|+ |+|.|+..
T Consensus       892 ~gmyaCDqCD-------K~FqKqSSLaRH-KYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHS  963 (1007)
T KOG3623|consen  892 DGMYACDQCD-------KAFQKQSSLARH-KYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHS  963 (1007)
T ss_pred             cccchHHHHH-------HHHHhhHHHHHh-hhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccc
Confidence            4455555554       555555555555 44555555555555555555555555555553 55555554 55555555


Q ss_pred             hhHHHHH
Q 037502          173 ESFIEHQ  179 (426)
Q Consensus       173 ~~L~~H~  179 (426)
                      .++..||
T Consensus       964 GSYSQHM  970 (1007)
T KOG3623|consen  964 GSYSQHM  970 (1007)
T ss_pred             cchHhhh
Confidence            5555555

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.22  E-value=2.8e-11  Score=125.31  Aligned_cols=106  Identities=24%  Similarity=0.449  Sum_probs=88.4

Q ss_pred             CCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           52 LESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        52 ~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      .-++.+.|+.||+.|. ...|..|+++|               .++|.|+ ||       ..+ ....|..| +++|.+.
T Consensus       449 el~~H~~C~~Cgk~f~-~s~LekH~~~~---------------Hkpv~Cp-Cg-------~~~-~R~~L~~H-~~thCp~  502 (567)
T PLN03086        449 EAKNHVHCEKCGQAFQ-QGEMEKHMKVF---------------HEPLQCP-CG-------VVL-EKEQMVQH-QASTCPL  502 (567)
T ss_pred             ccccCccCCCCCCccc-hHHHHHHHHhc---------------CCCccCC-CC-------CCc-chhHHHhh-hhccCCC
Confidence            3356689999999996 68899999998               2689999 87       655 56899999 5889999


Q ss_pred             CccccccCCCccc----------ChhhHHHHHHHcCCCCeecc-CCcccCChhhHHHHHHHhcC
Q 037502          132 KQWVCEKCSKGYA----------VQSDYKAHLKTCGTRGHSCD-CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       132 k~~~C~~C~k~f~----------~~~~L~~H~~~h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      +++.|.+|++.|.          ..+.|..|..++|.+++.|. ||+.|.. ..|..|+..++.
T Consensus       503 Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrl-rdm~~H~~~~h~  565 (567)
T PLN03086        503 RLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVML-KEMDIHQIAVHQ  565 (567)
T ss_pred             CceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeee-hhHHHHHHHhhc
Confidence            9999999999995          24589999999999999997 9999955 467888877654

>PHA00733 hypothetical protein

Probab=98.86  E-value=1.6e-09  Score=92.42  Aligned_cols=85  Identities=19%  Similarity=0.262  Sum_probs=63.8

Q ss_pred             CCCccccccCCcccCCchhHHHH--hhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCC
Q 037502           53 ESDRYVCEICNQGFQRDQNLQMH--RRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSN  130 (426)
Q Consensus        53 ~~~py~C~~Cgk~F~~~~~L~~H--~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~  130 (426)
                      +.+++.|.+|++.|.....|..|  ++.|.          ...+.++|.|+.|+       +.|.....|..|+ +.|  
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~----------~~~~~kPy~C~~Cg-------k~Fss~s~L~~H~-r~h--   96 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLL----------TSKAVSPYVCPLCL-------MPFSSSVSLKQHI-RYT--   96 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhc----------ccCCCCCccCCCCC-------CcCCCHHHHHHHH-hcC--
Confidence            45678888888888877777666  22221          11347788999988       8888888888884 556  


Q ss_pred             CCccccccCCCcccChhhHHHHHHH-cC
Q 037502          131 HKQWVCEKCSKGYAVQSDYKAHLKT-CG  157 (426)
Q Consensus       131 ~k~~~C~~C~k~f~~~~~L~~H~~~-h~  157 (426)
                      +.+|.|.+|++.|.....|..|+.. |+
T Consensus        97 ~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         97 EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            3468999999999999999999887 65

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.82  E-value=3.7e-09  Score=109.68  Aligned_cols=104  Identities=13%  Similarity=0.307  Sum_probs=80.4

Q ss_pred             CCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccc
Q 037502           14 SEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVV   93 (426)
Q Consensus        14 ~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~   93 (426)
                      ++.+.|..||+.|.. ..            +..|.++|.  ++|.|. ||+.| ....|..|+++|             .
T Consensus       451 ~~H~~C~~Cgk~f~~-s~------------LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~th-------------C  500 (567)
T PLN03086        451 KNHVHCEKCGQAFQQ-GE------------MEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQAST-------------C  500 (567)
T ss_pred             ccCccCCCCCCccch-HH------------HHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhcc-------------C
Confidence            345667777776642 32            677777764  789999 99866 568999999999             6


Q ss_pred             cCcceeCCCCCCCCCCcccccC----------CHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cC
Q 037502           94 RKRVFVCPEPSCLHHDPCHALG----------DLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CG  157 (426)
Q Consensus        94 ~~k~~~C~~C~c~~~~~~~~f~----------~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~  157 (426)
                      .++++.|+.|+       ..|.          ....|..|. ..+ |.+++.|..||+.|.. ..+..|+.. |.
T Consensus       501 p~Kpi~C~fC~-------~~v~~g~~~~d~~d~~s~Lt~HE-~~C-G~rt~~C~~Cgk~Vrl-rdm~~H~~~~h~  565 (567)
T PLN03086        501 PLRLITCRFCG-------DMVQAGGSAMDVRDRLRGMSEHE-SIC-GSRTAPCDSCGRSVML-KEMDIHQIAVHQ  565 (567)
T ss_pred             CCCceeCCCCC-------CccccCccccchhhhhhhHHHHH-Hhc-CCcceEccccCCeeee-hhHHHHHHHhhc
Confidence            79999999998       6664          246899994 554 9999999999999885 467889877 53

>PHA00733 hypothetical protein

Probab=98.74  E-value=1.1e-08  Score=87.34  Aligned_cols=84  Identities=13%  Similarity=0.301  Sum_probs=61.9

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHH--HH--hhhCCCCccccccCCCcccChhhHHHHHHHcCCCCeecc-CCc
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKH--FR--RKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCD-CGR  167 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H--~~--r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~kp~~C~-Cgk  167 (426)
                      ...+++.|.+|.       ..|.....|..|  +.  ..+.+.+||.|+.||+.|.....|..|++.+ +.+|.|. |++
T Consensus        36 ~~~~~~~~~~~~-------~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK  107 (128)
T PHA00733         36 PEQKRLIRAVVK-------TLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGK  107 (128)
T ss_pred             hhhhhHHHHHHh-------hhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCC
Confidence            346778888876       566665555544  11  1234578899999999999999999888875 4578896 999


Q ss_pred             ccCChhhHHHHHHHhcC
Q 037502          168 VFSRVESFIEHQDACSK  184 (426)
Q Consensus       168 ~F~~~~~L~~H~r~h~~  184 (426)
                      .|.....|..|+...++
T Consensus       108 ~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        108 EFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             ccCCHHHHHHHHHHhcC
Confidence            99999999999876554

>PHA02768 hypothetical protein; Provisional

Probab=98.57  E-value=2.7e-08  Score=70.79  Aligned_cols=41  Identities=20%  Similarity=0.466  Sum_probs=23.3

Q ss_pred             cccccCCCcccChhhHHHHHHHcCCCCeecc-CCcccCChhhH
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKTCGTRGHSCD-CGRVFSRVESF  175 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~h~~kp~~C~-Cgk~F~~~~~L  175 (426)
                      |.|+.||+.|++.++|..|+++|. ++|.|. |++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceeccccee
Confidence            556666666666666666666644 455563 66666555444

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.46  E-value=4.2e-08  Score=96.10  Aligned_cols=149  Identities=17%  Similarity=0.231  Sum_probs=101.5

Q ss_pred             CcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccc---------
Q 037502           16 PFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL---------   86 (426)
Q Consensus        16 py~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~---------   86 (426)
                      .|.|..|...|.+...|..|.            -.-+----|+|.+|+|.|+...||..|+|.|. +.+..         
T Consensus       267 dyiCqLCK~kYeD~F~LAQHr------------C~RIV~vEYrCPEC~KVFsCPANLASHRRWHK-PR~eaa~a~~~P~k  333 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHR------------CPRIVHVEYRCPECDKVFSCPANLASHRRWHK-PRPEAAKAGSPPPK  333 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhcc------------CCeeEEeeecCCcccccccCchhhhhhhcccC-CchhhhhcCCCChh
Confidence            599999999999988866664            11111123999999999999999999999995 11110         


Q ss_pred             ------------cccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhC-CCC---------------------
Q 037502           87 ------------KRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHS-NHK---------------------  132 (426)
Q Consensus        87 ------------~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~-~~k---------------------  132 (426)
                                  .+......+..|.|.+|+       +.|.+...|++|. .+|. ..+                     
T Consensus       334 ~~~~~rae~~ea~rsg~dss~gi~~C~~C~-------KkFrRqAYLrKHq-lthq~~~~~k~~a~~f~~s~~~~l~~~~~  405 (500)
T KOG3993|consen  334 QAVETRAEVQEAERSGDDSSSGIFSCHTCG-------KKFRRQAYLRKHQ-LTHQRAPLAKEKAPKFLLSRVIPLMHFNQ  405 (500)
T ss_pred             hhhhhhhhhhhccccCCcccCceeecHHhh-------hhhHHHHHHHHhH-HhhhccccchhcccCcchhhccccccccc
Confidence                        001111334589999999       9999999999994 4442 100                     


Q ss_pred             ------------------------ccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHhcCC
Q 037502          133 ------------------------QWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       133 ------------------------~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                                              -..|..||-.+..+..--.|.+. +.+..|.|+ |.-.|...-.|.+|...++-.
T Consensus       406 ~~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hps  484 (500)
T KOG3993|consen  406 AVATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPS  484 (500)
T ss_pred             ccccccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChH
Confidence                                    12344555555554444444444 455668897 999999999999998776543

>PHA02768 hypothetical protein; Provisional

Probab=98.33  E-value=2.7e-07  Score=65.72  Aligned_cols=44  Identities=18%  Similarity=0.276  Sum_probs=39.4

Q ss_pred             ceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHH
Q 037502           97 VFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYK  150 (426)
Q Consensus        97 ~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~  150 (426)
                      -|.|+.||       +.|...++|..| +++|+  ++|+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CG-------K~Fs~~~~L~~H-~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICG-------EIYIKRKSMITH-LRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhC-------CeeccHHHHHHH-HHhcC--CcccCCcccceecccceeE
Confidence            48999999       999999999999 58887  7999999999999887764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.14  E-value=1.4e-06  Score=52.88  Aligned_cols=26  Identities=27%  Similarity=0.809  Sum_probs=21.5

Q ss_pred             HHHHHHHhhhCCCCccccccCCCcccC
Q 037502          119 GIKKHFRRKHSNHKQWVCEKCSKGYAV  145 (426)
Q Consensus       119 ~l~~H~~r~H~~~k~~~C~~C~k~f~~  145 (426)
                      +|..|+ ++|+|+|||.|+.|++.|..
T Consensus         1 ~l~~H~-~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHM-RTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHH-HHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHh-hhcCCCCCCCCCCCcCeeCc
Confidence            478884 68999999999999998863

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.05  E-value=6.9e-07  Score=54.23  Aligned_cols=25  Identities=20%  Similarity=0.474  Sum_probs=21.9

Q ss_pred             hccCccccCCCCccccccCCcccCC
Q 037502           44 VSLSPKTLLESDRYVCEICNQGFQR   68 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~~Cgk~F~~   68 (426)
                      |..|+++|++++||+|+.|++.|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            6788999999999999999999863

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.93  E-value=1.7e-06  Score=84.99  Aligned_cols=82  Identities=22%  Similarity=0.464  Sum_probs=67.5

Q ss_pred             cceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHHcCCC----------------
Q 037502           96 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTR----------------  159 (426)
Q Consensus        96 k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~k----------------  159 (426)
                      ..|.|..|.       ..|.+.+.|-+| +-.-...--|+|.+|+|.|+-..+|..|.|+|.-|                
T Consensus       266 GdyiCqLCK-------~kYeD~F~LAQH-rC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~  337 (500)
T KOG3993|consen  266 GDYICQLCK-------EKYEDAFALAQH-RCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVE  337 (500)
T ss_pred             HHHHHHHHH-------HhhhhHHHHhhc-cCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhh
Confidence            359999998       899999999999 43222234599999999999999999999987211                


Q ss_pred             ------------------Ceecc-CCcccCChhhHHHHHHHhcCC
Q 037502          160 ------------------GHSCD-CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       160 ------------------p~~C~-Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                                        .|.|. |+|.|.+...|++|+-+|+..
T Consensus       338 ~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  338 TRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             hhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcc
Confidence                              38896 999999999999999998654

>PHA00616 hypothetical protein

Probab=97.80  E-value=9.8e-06  Score=55.03  Aligned_cols=32  Identities=13%  Similarity=0.316  Sum_probs=21.1

Q ss_pred             ccccccCCCcccChhhHHHHHHH-cCCCCeecc
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD  164 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~  164 (426)
                      ||.|..||+.|.+.++|..|++. ||++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            46666666666666666666666 666666664

>PHA00732 hypothetical protein

Probab=97.73  E-value=2.2e-05  Score=61.00  Aligned_cols=46  Identities=30%  Similarity=0.605  Sum_probs=29.5

Q ss_pred             ceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH
Q 037502           97 VFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus        97 ~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ||.|..|+       +.|.+...|..|++..|.   ++.|+.||+.|.   .|..|+.+
T Consensus         1 py~C~~Cg-------k~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICG-------FTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCC-------CccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            46677776       777777777777432454   246777777776   36666654

>PHA00616 hypothetical protein

Probab=97.73  E-value=9.6e-06  Score=55.05  Aligned_cols=34  Identities=15%  Similarity=0.290  Sum_probs=29.7

Q ss_pred             ccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      ||+|..||+.|...++|.+|++.||             |++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~h-------------g~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVH-------------KQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhc-------------CCCccceeE
Confidence            6999999999999999999999994             677777654

>PHA00732 hypothetical protein

Probab=97.60  E-value=4.2e-05  Score=59.49  Aligned_cols=44  Identities=25%  Similarity=0.500  Sum_probs=36.7

Q ss_pred             ccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHH
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHF  124 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~  124 (426)
                      ||.|+.||+.|.+..+|+.|++.++            .   ++.|+.|+       +.|.   .+..|+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H------------~---~~~C~~Cg-------KsF~---~l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNH------------T---LTKCPVCN-------KSYR---RLNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhccc------------C---CCccCCCC-------CEeC---Chhhhh
Confidence            6899999999999999999998532            2   35899998       8887   477886

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.59  E-value=0.00011  Score=52.83  Aligned_cols=49  Identities=24%  Similarity=0.422  Sum_probs=36.1

Q ss_pred             ceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC-CccccccCCCcccChhhHHHHHHH
Q 037502           97 VFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH-KQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus        97 ~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~-k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      .|.||+|+       + ..+...|..|+...|..+ +.+.|++|...+.  .+|..|+..
T Consensus         2 ~f~CP~C~-------~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    2 SFTCPYCG-------K-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             CcCCCCCC-------C-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            47888887       7 455678888887777764 5688888887655  377788776

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.53  E-value=3.9e-05  Score=44.89  Aligned_cols=23  Identities=48%  Similarity=1.012  Sum_probs=21.6

Q ss_pred             cccccCCcccCCchhHHHHhhhc
Q 037502           57 YVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        57 y~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |+|++|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.53  E-value=2.3e-05  Score=74.52  Aligned_cols=26  Identities=23%  Similarity=0.566  Sum_probs=20.2

Q ss_pred             cCcceeCCCCCCCCCCcccccCCHHHHHHHH
Q 037502           94 RKRVFVCPEPSCLHHDPCHALGDLVGIKKHF  124 (426)
Q Consensus        94 ~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~  124 (426)
                      ++|||+|++.||.     +.|....+|+.|+
T Consensus       346 d~KpykCpV~gC~-----K~YknqnGLKYH~  371 (423)
T COG5189         346 DGKPYKCPVEGCN-----KKYKNQNGLKYHM  371 (423)
T ss_pred             cCceecCCCCCch-----hhhccccchhhhh
Confidence            3588888888876     7888888888884

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.47  E-value=4.4e-05  Score=72.70  Aligned_cols=64  Identities=14%  Similarity=0.306  Sum_probs=46.5

Q ss_pred             CCCccccc--ccccccCcCCCCCCCCC-------CCcchhccCccccCCCCccccccCCcccCCchhHHHHhh
Q 037502           14 SEPFSCLE--NGISHNKRKRRPAGTPD-------PDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRR   77 (426)
Q Consensus        14 ~kpy~C~~--Cg~~f~~~~~l~~H~~~-------~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r   77 (426)
                      +|||+|++  |+|.+....-|+.|+.-       |.......+..--...|||+|++|+|.|.....|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            59999965  99999999999998831       111111112222345699999999999999999998853

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.12  E-value=0.00073  Score=48.55  Aligned_cols=49  Identities=18%  Similarity=0.466  Sum_probs=39.6

Q ss_pred             ccccccCCCcccChhhHHHHHHH-c--CCCCeecc-CCcccCChhhHHHHHHHhcC
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT-C--GTRGHSCD-CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~-h--~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      .|.|++|++ ..+...|..|... |  ..+.+.|. |...+.  .+|..|+..+++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            489999999 4557899999999 7  34679997 998765  499999987653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.06  E-value=0.00034  Score=40.81  Aligned_cols=20  Identities=30%  Similarity=0.798  Sum_probs=9.2

Q ss_pred             ccccCCCcccChhhHHHHHH
Q 037502          135 VCEKCSKGYAVQSDYKAHLK  154 (426)
Q Consensus       135 ~C~~C~k~f~~~~~L~~H~~  154 (426)
                      +|++|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHh
Confidence            44444444444444444443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.02  E-value=0.00036  Score=40.75  Aligned_cols=24  Identities=33%  Similarity=0.863  Sum_probs=20.3

Q ss_pred             cccccCCcccCCchhHHHHhhhcc
Q 037502           57 YVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        57 y~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      |.|++|++.|.+...|+.|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999873

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.97  E-value=0.00035  Score=42.47  Aligned_cols=25  Identities=28%  Similarity=0.652  Sum_probs=23.4

Q ss_pred             ccccccCCcccCCchhHHHHhhhcc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +|+|+.|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999999884

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.51  E-value=0.0019  Score=51.85  Aligned_cols=72  Identities=17%  Similarity=0.402  Sum_probs=18.5

Q ss_pred             ccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccc
Q 037502           58 VCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCE  137 (426)
Q Consensus        58 ~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~  137 (426)
                      +|..|+..|.....|..|+...|+-            ..+    ..        ..+.....+..++..  .-...|.|.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~------------~~~----~~--------~~l~~~~~~~~~~~~--~~~~~~~C~   54 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGF------------DIP----DQ--------KYLVDPNRLLNYLRK--KVKESFRCP   54 (100)
T ss_dssp             --------------------------------------------------------------------------SSEEBS
T ss_pred             Ccccccccccccccccccccccccc------------ccc----cc--------ccccccccccccccc--ccCCCCCCC
Confidence            4888999999999999998655410            000    00        112222333333211  112357888


Q ss_pred             cCCCcccChhhHHHHHHH
Q 037502          138 KCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       138 ~C~k~f~~~~~L~~H~~~  155 (426)
                      +|++.|.....|..|++.
T Consensus        55 ~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   55 YCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SSS-EESSHHHHHHHHHH
T ss_pred             ccCCCCcCHHHHHHHHcC
Confidence            888888888888888887

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.40  E-value=0.0025  Score=36.98  Aligned_cols=22  Identities=27%  Similarity=0.801  Sum_probs=10.6

Q ss_pred             cccccCCCcccChhhHHHHHHH
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      |.|++|++.|.+...|..|+++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            3455555555555555555544

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.30  E-value=0.0034  Score=50.37  Aligned_cols=74  Identities=16%  Similarity=0.257  Sum_probs=21.7

Q ss_pred             eCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHHcCCCCeecc-CCcccCChhhHHH
Q 037502           99 VCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCD-CGRVFSRVESFIE  177 (426)
Q Consensus        99 ~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~kp~~C~-Cgk~F~~~~~L~~  177 (426)
                      .|..|+       ..|.....|..|+...|.-..+     ....+.....+..+.+..-...+.|. |++.|.....|..
T Consensus         1 ~C~~C~-------~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~   68 (100)
T PF12756_consen    1 QCLFCD-------ESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQE   68 (100)
T ss_dssp             ------------------------------------------------------------SSEEBSSSS-EESSHHHHHH
T ss_pred             Cccccc-------cccccccccccccccccccccc-----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHH
Confidence            478887       8899999999998777743322     12222344445555544333479996 9999999999999


Q ss_pred             HHHHhcC
Q 037502          178 HQDACSK  184 (426)
Q Consensus       178 H~r~h~~  184 (426)
                      |++.+..
T Consensus        69 Hm~~~~H   75 (100)
T PF12756_consen   69 HMRSKHH   75 (100)
T ss_dssp             HHHHTTT
T ss_pred             HHcCccC
Confidence            9998643

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.26  E-value=0.0026  Score=38.52  Aligned_cols=22  Identities=36%  Similarity=0.899  Sum_probs=11.1

Q ss_pred             eecc-CCcccCChhhHHHHHHHh
Q 037502          161 HSCD-CGRVFSRVESFIEHQDAC  182 (426)
Q Consensus       161 ~~C~-Cgk~F~~~~~L~~H~r~h  182 (426)
                      |.|+ |++.|.....|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            4453 555555555555555444

>smart00355 ZnF_C2H2 zinc finger

Probab=96.10  E-value=0.0035  Score=36.92  Aligned_cols=23  Identities=35%  Similarity=0.742  Sum_probs=21.6

Q ss_pred             cccccCCcccCCchhHHHHhhhc
Q 037502           57 YVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        57 y~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |+|+.|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            68999999999999999999987

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=95.87  E-value=0.013  Score=62.35  Aligned_cols=67  Identities=21%  Similarity=0.366  Sum_probs=41.5

Q ss_pred             eCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccC------CCcccChhhHHHHHHH-cCCCCeecc---CC-c
Q 037502           99 VCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC------SKGYAVQSDYKAHLKT-CGTRGHSCD---CG-R  167 (426)
Q Consensus        99 ~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C------~k~f~~~~~L~~H~~~-h~~kp~~C~---Cg-k  167 (426)
                      .|..|.       ..|.....|..|++..|     |-|..|      +..|....+|..|.+. |    |.|+   |. +
T Consensus       184 ~C~~C~-------~~fld~~el~rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~  247 (669)
T KOG2231|consen  184 LCKFCH-------ERFLDDDELYRHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTK  247 (669)
T ss_pred             cchhhh-------hhhccHHHHHHhhccce-----eheeecCcccccchhcccchHHHHHhhhcC----ccccccccccc
Confidence            466665       77777888888864433     556555      3567777888888877 6    6673   53 4


Q ss_pred             ccCChhhHHHHHHH
Q 037502          168 VFSRVESFIEHQDA  181 (426)
Q Consensus       168 ~F~~~~~L~~H~r~  181 (426)
                      .|.....+..|++.
T Consensus       248 ~f~~~~~~ei~lk~  261 (669)
T KOG2231|consen  248 KFYVAFELEIELKA  261 (669)
T ss_pred             eeeehhHHHHHHHh
Confidence            44444445555553

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.84  E-value=0.004  Score=63.01  Aligned_cols=140  Identities=17%  Similarity=0.274  Sum_probs=80.3

Q ss_pred             CCcccccccccccCcCCCCCCCCCCCcchhccCccccCCC--Cccccc--cCCcccCCchhHHHHhhhccCccccccccC
Q 037502           15 EPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLES--DRYVCE--ICNQGFQRDQNLQMHRRRHKVPWKLLKRET   90 (426)
Q Consensus        15 kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~--~py~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~   90 (426)
                      .++.|..|...|.....|..|.+.          ..|+++  +++.|.  .|++.|.+...+..|..+|           
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~----------~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------  346 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRS----------VNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLH-----------  346 (467)
T ss_pred             cCCCCccccCCccccccccccccc----------cccccccCCceeeeccCCCccccccccccCCcccc-----------
Confidence            478999999999988874444431          167777  899999  7999999999999999999           


Q ss_pred             ccccCcceeCCCCCCCCCCcccccCCHHH-----HHHHHHhhhCCCCcccccc--CCCcccChhhHHHHHHHc-CCCCee
Q 037502           91 PVVRKRVFVCPEPSCLHHDPCHALGDLVG-----IKKHFRRKHSNHKQWVCEK--CSKGYAVQSDYKAHLKTC-GTRGHS  162 (426)
Q Consensus        91 ~~~~~k~~~C~~C~c~~~~~~~~f~~~~~-----l~~H~~r~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h-~~kp~~  162 (426)
                        .+.+++.|....|.     ..+.....     .... ...-...+.+.|..  |-..+.+...+..|...+ ..+++.
T Consensus       347 --~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (467)
T COG5048         347 --TSISPAKEKLLNSS-----SKFSPLLNNEPPQSLQQ-YKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYN  418 (467)
T ss_pred             --cCCCccccccccCc-----cccccccCCCCccchhh-ccCccCCccccccccchhhhhccccccccccccccccCCcC
Confidence              34444444443322     11111111     0000 01111223344422  445555555555555443 333333


Q ss_pred             cc---CCcccCChhhHHHHHHHhc
Q 037502          163 CD---CGRVFSRVESFIEHQDACS  183 (426)
Q Consensus       163 C~---Cgk~F~~~~~L~~H~r~h~  183 (426)
                      |.   |.+.|.....+..|++.+.
T Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~  442 (467)
T COG5048         419 CKNPPCSKSFNRHYNLIPHKKIHT  442 (467)
T ss_pred             CCCCcchhhccCcccccccccccc
Confidence            32   6666666666666665553

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.53  E-value=0.0087  Score=41.74  Aligned_cols=33  Identities=12%  Similarity=0.233  Sum_probs=22.8

Q ss_pred             hCCCCccccccCCCcccChhhHHHHHHH-cCCCC
Q 037502          128 HSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRG  160 (426)
Q Consensus       128 H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp  160 (426)
                      +..+.|..|++|+..+.+..+|++|+.. |+.||
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            4467788999999999999999999988 87775

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.53  E-value=0.0066  Score=35.99  Aligned_cols=23  Identities=35%  Similarity=0.928  Sum_probs=21.2

Q ss_pred             cccccCCcccCCchhHHHHhhhc
Q 037502           57 YVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        57 y~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |.|++|++.|.+...|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999865

>smart00355 ZnF_C2H2 zinc finger

Probab=94.91  E-value=0.022  Score=33.37  Aligned_cols=22  Identities=32%  Similarity=0.764  Sum_probs=11.6

Q ss_pred             cccccCCCcccChhhHHHHHHH
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      |.|..|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            3455555555555555555543

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=94.60  E-value=0.021  Score=64.34  Aligned_cols=124  Identities=16%  Similarity=0.202  Sum_probs=86.5

Q ss_pred             CCCCccccccCCcccCCchhHHHHhhhccCccc-----------cccc-cCccccCcceeCCCCCCCCCCcccccCCHHH
Q 037502           52 LESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK-----------LLKR-ETPVVRKRVFVCPEPSCLHHDPCHALGDLVG  119 (426)
Q Consensus        52 ~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~-----------~~~~-~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~  119 (426)
                      .-.+-|+|..|+..|.....|..|||.-|.+..           .+.+ .....+.++|.|..|.       ..+..+.+
T Consensus       461 S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~-------~stttng~  533 (1406)
T KOG1146|consen  461 SFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACN-------YSTTTNGN  533 (1406)
T ss_pred             cccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeee-------eeeecchH
Confidence            334779999999999999999999998442221           1111 1112556889999998       88899999


Q ss_pred             HHHHHHhh-hC-----------------------------------C------CCccccccCCCcccChhhHHHHHHH-c
Q 037502          120 IKKHFRRK-HS-----------------------------------N------HKQWVCEKCSKGYAVQSDYKAHLKT-C  156 (426)
Q Consensus       120 l~~H~~r~-H~-----------------------------------~------~k~~~C~~C~k~f~~~~~L~~H~~~-h  156 (426)
                      |..|++.. |.                                   |      +-.|.|.+|+..-+...+|+.|+.. +
T Consensus       534 LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~  613 (1406)
T KOG1146|consen  534 LSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASP  613 (1406)
T ss_pred             HHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCC
Confidence            99997521 10                                   1      1248899999888888888889887 4


Q ss_pred             CC-CCeecc-CCcccCChhhHHHHHHHh
Q 037502          157 GT-RGHSCD-CGRVFSRVESFIEHQDAC  182 (426)
Q Consensus       157 ~~-kp~~C~-Cgk~F~~~~~L~~H~r~h  182 (426)
                      .- -|.-|. |+-.+.....+..+.+-+
T Consensus       614 ~s~~p~~~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  614 SSSPPSLVLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             CCCChHHHhhhcchhhccccccCcCCCC
Confidence            33 336664 777776666666655544

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.55  E-value=0.016  Score=35.18  Aligned_cols=23  Identities=22%  Similarity=0.748  Sum_probs=20.4

Q ss_pred             cccccCCcccCCchhHHHHhhhc
Q 037502           57 YVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        57 y~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |.|+.|++.|.+...|..|+++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999998754

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.11  E-value=0.028  Score=49.81  Aligned_cols=36  Identities=22%  Similarity=0.525  Sum_probs=24.7

Q ss_pred             ccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCCh
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRV  172 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~  172 (426)
                      +|.|. |++   ....+++|.++ .++++|.|. |+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            57776 776   55667777777 477777774 77777543

>PRK04860 hypothetical protein; Provisional

Probab=94.09  E-value=0.036  Score=49.14  Aligned_cols=33  Identities=21%  Similarity=0.490  Sum_probs=29.6

Q ss_pred             CccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCC
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPS  104 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~  104 (426)
                      -+|.|. |++   ...++.+|.++|             .++++|.|..|+
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~-------------~g~~~YrC~~C~  150 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVV-------------RGEAVYRCRRCG  150 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHh-------------cCCccEECCCCC
Confidence            479998 998   678899999999             789999999988

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.68  E-value=0.044  Score=38.29  Aligned_cols=29  Identities=21%  Similarity=0.422  Sum_probs=21.0

Q ss_pred             CCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           52 LESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        52 ~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ..+.|..|++|+..+.+..+|++|+.++|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHh
Confidence            34678999999999999999999997765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.48  E-value=0.06  Score=54.38  Aligned_cols=146  Identities=13%  Similarity=0.118  Sum_probs=88.9

Q ss_pred             CCCCCC--CCCCC--CCcccc--cccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc--CCcccCCchhHHHH
Q 037502            4 NNSPSA--IPCSS--EPFSCL--ENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI--CNQGFQRDQNLQMH   75 (426)
Q Consensus         4 ~~~~~~--~~~~~--kpy~C~--~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~--Cgk~F~~~~~L~~H   75 (426)
                      +..|.+  +|.++  +||.|.  .|++.|.+...            +..|..+|++..++.|..  |.+.+.....-..+
T Consensus       305 l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (467)
T COG5048         305 LTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDA------------LKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPP  372 (467)
T ss_pred             ccccccccccccccCCceeeeccCCCcccccccc------------ccCCcccccCCCccccccccCccccccccCCCCc
Confidence            467777  89999  999999  79999999987            555556666666666643  44444433331111


Q ss_pred             hhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCC--ccccccCCCcccChhhHHHHH
Q 037502           76 RRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK--QWVCEKCSKGYAVQSDYKAHL  153 (426)
Q Consensus        76 ~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k--~~~C~~C~k~f~~~~~L~~H~  153 (426)
                      ......        ......+.+.|..-+|.     ..+.+...+..| ...|...+  .+.|..|.+.|.....+..|+
T Consensus       373 ~~~~~~--------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (467)
T COG5048         373 QSLQQY--------KDLKNDKKSETLSNSCI-----RNFKRDSNLSLH-IITHLSFRPYNCKNPPCSKSFNRHYNLIPHK  438 (467)
T ss_pred             cchhhc--------cCccCCccccccccchh-----hhhccccccccc-cccccccCCcCCCCCcchhhccCcccccccc
Confidence            111100        00023445555554443     566666666666 34555555  456677999999999999999


Q ss_pred             HHc-CCCCeeccCCcccCChhhH
Q 037502          154 KTC-GTRGHSCDCGRVFSRVESF  175 (426)
Q Consensus       154 ~~h-~~kp~~C~Cgk~F~~~~~L  175 (426)
                      +.+ ...++.|.+-+.|.....+
T Consensus       439 ~~~~~~~~~~~~~~~~~~~~~~~  461 (467)
T COG5048         439 KIHTNHAPLLCSILKSFRRDLDL  461 (467)
T ss_pred             cccccCCceeeccccccchhhhh
Confidence            985 4455555555555444333

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=93.46  E-value=0.038  Score=32.64  Aligned_cols=21  Identities=24%  Similarity=0.858  Sum_probs=11.5

Q ss_pred             cccccCCCcccChhhHHHHHH
Q 037502          134 WVCEKCSKGYAVQSDYKAHLK  154 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~  154 (426)
                      |.|++|++.|.....|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555555555555555554

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=92.27  E-value=0.073  Score=31.13  Aligned_cols=23  Identities=35%  Similarity=0.726  Sum_probs=18.6

Q ss_pred             cccccCCcccCCchhHHHHhhhcc
Q 037502           57 YVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        57 y~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      |+|+.|+.... ...|..|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998888 899999999874

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.18  E-value=0.036  Score=33.58  Aligned_cols=22  Identities=27%  Similarity=0.798  Sum_probs=13.5

Q ss_pred             cccccCCCcccChhhHHHHHHH
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5566666666666666666543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK06568 F0F1 ATP synthase subunit B; Validated

Probab=92.17  E-value=2.1  Score=37.63  Aligned_cols=64  Identities=17%  Similarity=0.138  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhcchhhhhcccCCC
Q 037502          340 AEEARQAAKRQIELAEQ-EFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSRL  406 (426)
Q Consensus       340 ae~ar~~Akrq~e~Ae~-e~~~Akr~~e~a~~e~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~  406 (426)
                      -++|++.|.++++.|-. +.++|+|+.++|+.+.+   ..|+.|+..|-..+..+.=..+.+-|++.-
T Consensus        76 i~~A~~~a~~~~~ea~~eA~~ea~r~~~~A~~~Ie---~Ek~~Al~elr~eva~Lav~iAsk~~~~~~  140 (154)
T PRK06568         76 IEESNEVTKKIIQEKTKEIEEFLEHKKSDAIQLIQ---NQKSTASKELQDEFCDEVIKLVSEYFQSVK  140 (154)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            33444444444443332 23446666666665554   456778888887888877788888888754

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=91.58  E-value=0.098  Score=55.91  Aligned_cols=11  Identities=18%  Similarity=0.150  Sum_probs=7.8

Q ss_pred             ccccccccccc
Q 037502           17 FSCLENGISHN   27 (426)
Q Consensus        17 y~C~~Cg~~f~   27 (426)
                      +.|.+|+..|.
T Consensus       100 ~~C~~C~~~~~  110 (669)
T KOG2231|consen  100 HSCHICDRRFR  110 (669)
T ss_pred             hhcCccccchh
Confidence            56788877664

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=90.99  E-value=0.14  Score=47.85  Aligned_cols=45  Identities=29%  Similarity=0.758  Sum_probs=28.6

Q ss_pred             cccccCCCcccChhhHHHHHHHcCCCCeec-cCCcccCChhhHHHHHH
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKTCGTRGHSC-DCGRVFSRVESFIEHQD  180 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~h~~kp~~C-~Cgk~F~~~~~L~~H~r  180 (426)
                      |.|.+||..... ..+-+|+..+...-|.| |||+.|.+ .++..|..
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccCCeeEEeeccccccc-chhhhhhh
Confidence            667777766553 34556776643366777 57777766 66666654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=90.41  E-value=0.23  Score=28.97  Aligned_cols=20  Identities=40%  Similarity=0.710  Sum_probs=7.2

Q ss_pred             ccccCCCcccChhhHHHHHHH
Q 037502          135 VCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       135 ~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      +|..|+.... ...|..|++.
T Consensus         2 ~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    2 KCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             E-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCcCC-HHHHHHHHHh
Confidence            3444443333 3344444433

>smart00451 ZnF_U1 U1-like zinc finger

Probab=89.27  E-value=0.24  Score=31.61  Aligned_cols=24  Identities=21%  Similarity=0.674  Sum_probs=21.1

Q ss_pred             ccccccCCcccCCchhHHHHhhhc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      +|.|++|++.|.....+..|++..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChH
Confidence            588999999999999999998644

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=89.18  E-value=0.14  Score=58.12  Aligned_cols=70  Identities=17%  Similarity=0.271  Sum_probs=51.2

Q ss_pred             ccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-c-------------------------CCCCeecc-C
Q 037502          113 ALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-C-------------------------GTRGHSCD-C  165 (426)
Q Consensus       113 ~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h-------------------------~~kp~~C~-C  165 (426)
                      .+.+...+..|+...|+-.|.|+|..|+-.|.....|-.|+|. |                         +.++|.|. |
T Consensus       445 ~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C  524 (1406)
T KOG1146|consen  445 LLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRAC  524 (1406)
T ss_pred             hhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceee
Confidence            3333444444444455666788888888888888888888886 3                         23578896 9


Q ss_pred             CcccCChhhHHHHHHHh
Q 037502          166 GRVFSRVESFIEHQDAC  182 (426)
Q Consensus       166 gk~F~~~~~L~~H~r~h  182 (426)
                      ..+|+.+.+|..|+...
T Consensus       525 ~~stttng~LsihlqS~  541 (1406)
T KOG1146|consen  525 NYSTTTNGNLSIHLQSD  541 (1406)
T ss_pred             eeeeecchHHHHHHHHH
Confidence            99999999999999753

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=88.33  E-value=0.2  Score=45.38  Aligned_cols=80  Identities=20%  Similarity=0.437  Sum_probs=63.3

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-c----------CCCCe
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-C----------GTRGH  161 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h----------~~kp~  161 (426)
                      .....|.|++-||-     ..|-....+..|+...|+    -.|.+|.+.|....-|..|+.- |          |.--|
T Consensus        75 ~~~~~~~cqvagc~-----~~~d~lD~~E~hY~~~h~----~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy  145 (253)
T KOG4173|consen   75 PRVPAFACQVAGCC-----QVFDALDDYEHHYHTLHG----NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMY  145 (253)
T ss_pred             cccccccccccchH-----HHHhhhhhHHHhhhhccc----chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHH
Confidence            34567889998874     888888888888654553    3899999999999999999875 5          44569


Q ss_pred             ec--c-CCcccCChhhHHHHHHH
Q 037502          162 SC--D-CGRVFSRVESFIEHQDA  181 (426)
Q Consensus       162 ~C--~-Cgk~F~~~~~L~~H~r~  181 (426)
                      .|  + |+..|.+....+.|+-.
T Consensus       146 ~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  146 QCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             HHHHHhhhhhhhhhhhhhhHHHH
Confidence            99  3 99999999999999743

>PRK14471 F0F1 ATP synthase subunit B; Provisional

Probab=87.96  E-value=8.9  Score=33.92  Aligned_cols=36  Identities=25%  Similarity=0.376  Sum_probs=21.5

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 037502          340 AEEARQAAKRQIELA-EQEFANAKRIRQQAQAELDKA  375 (426)
Q Consensus       340 ae~ar~~Akrq~e~A-e~e~~~Akr~~e~a~~e~~~a  375 (426)
                      -++|++.|.++++.+ +++.++|.++.+.|+.+++..
T Consensus        80 i~~A~~~a~~~~~~~~~~A~~ea~~~~~~a~~~i~~e  116 (164)
T PRK14471         80 LKEAREIKEKMIADAKEEAQVEGDKMIEQAKASIESE  116 (164)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444555555444 455677888888887776543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=87.36  E-value=0.42  Score=28.46  Aligned_cols=21  Identities=29%  Similarity=0.686  Sum_probs=17.5

Q ss_pred             cccccCCcccCCchhHHHHhhh
Q 037502           57 YVCEICNQGFQRDQNLQMHRRR   78 (426)
Q Consensus        57 y~C~~Cgk~F~~~~~L~~H~r~   78 (426)
                      ..|+.||+.| ....|..|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 67789899765

>PRK14475 F0F1 ATP synthase subunit B; Provisional

Probab=87.02  E-value=10  Score=33.66  Aligned_cols=58  Identities=16%  Similarity=0.211  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhcchhhh
Q 037502          339 CAEEARQAAKRQIELAEQ-EFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACK  399 (426)
Q Consensus       339 ~ae~ar~~Akrq~e~Ae~-e~~~Akr~~e~a~~e~~~a~~~~~~a~~~~~~~~~~~~~~~~~  399 (426)
                      +-+++++.|..+++.+.. +.++|.++.+.|+.+.++   .|+.|+.+|...+..+......
T Consensus        81 Ii~~A~~~a~~~~~~~~~~A~~ea~~~~~~A~~~I~~---e~~~a~~el~~e~~~lAv~~A~  139 (167)
T PRK14475         81 MLAAAKADARRMEAEAKEKLEEQIKRRAEMAERKIAQ---AEAQAAADVKAAAVDLAAQAAE  139 (167)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence            333444444444433322 345667777777766544   4455555555444444444333

>PRK06568 F0F1 ATP synthase subunit B; Validated

Probab=86.80  E-value=10  Score=33.34  Aligned_cols=30  Identities=27%  Similarity=0.325  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHHhhhc
Q 037502          358 FANAKRIRQQAQAELDK-AQALKEHAIKQIN  387 (426)
Q Consensus       358 ~~~Akr~~e~a~~e~~~-a~~~~~~a~~~~~  387 (426)
                      .+.|.++++.|..+... +.++++.|-++|.
T Consensus        80 ~~~a~~~~~ea~~eA~~ea~r~~~~A~~~Ie  110 (154)
T PRK06568         80 NEVTKKIIQEKTKEIEEFLEHKKSDAIQLIQ  110 (154)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34555666666666655 7777888777775

>TIGR03825 FliH_bacil flagellar assembly protein FliH

Probab=86.80  E-value=7.9  Score=37.00  Aligned_cols=29  Identities=17%  Similarity=0.386  Sum_probs=13.9

Q ss_pred             HHHHHHHHHHHHhhhchhhhhhcchhhhh
Q 037502          372 LDKAQALKEHAIKQINSTILRVTCHACKQ  400 (426)
Q Consensus       372 ~~~a~~~~~~a~~~~~~~~~~~~~~~~~~  400 (426)
                      ++++....+..+..+...|+.+.+..-++
T Consensus       120 ~~~a~~~~~~~l~~~e~el~~La~~iAeK  148 (255)
T TIGR03825       120 VEEAKDDYEEKIESAQPLIIELACALAEK  148 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55555444555555544444444444333

This bacillus clade of FliH proteins is not found by the Pfam FliH model pfam02108, but is closely related to the sequences identified by that model. Sequences identified by this model are observed in flagellar operons in an analogous position relative to other flagellar operon genes.

>PRK07352 F0F1 ATP synthase subunit B; Validated

Probab=86.79  E-value=11  Score=33.71  Aligned_cols=37  Identities=22%  Similarity=0.285  Sum_probs=21.1

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 037502          339 CAEEARQAAKRQIEL-AEQEFANAKRIRQQAQAELDKA  375 (426)
Q Consensus       339 ~ae~ar~~Akrq~e~-Ae~e~~~Akr~~e~a~~e~~~a  375 (426)
                      +-++++++|.++++. -+++.++|.+++++|+.+++..
T Consensus        90 ii~~a~~~a~~~~~~~~~~A~~e~~~~~~~a~~~i~~e  127 (174)
T PRK07352         90 IRADAKARAEAIRAEIEKQAIEDMARLKQTAAADLSAE  127 (174)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444444444332 2455667778888888777655

>smart00451 ZnF_U1 U1-like zinc finger

Probab=86.69  E-value=0.47  Score=30.24  Aligned_cols=23  Identities=26%  Similarity=0.573  Sum_probs=15.9

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      +|-|+.|++.|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46677777777777777777655

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PRK14472 F0F1 ATP synthase subunit B; Provisional

Probab=86.67  E-value=11  Score=33.69  Aligned_cols=37  Identities=19%  Similarity=0.298  Sum_probs=20.8

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 037502          339 CAEEARQAAKRQIELA-EQEFANAKRIRQQAQAELDKA  375 (426)
Q Consensus       339 ~ae~ar~~Akrq~e~A-e~e~~~Akr~~e~a~~e~~~a  375 (426)
                      +-++++++|.++++.+ +++.++|.++.+.|+.+++..
T Consensus        89 ii~~A~~~a~~~~~~~~~~A~~ea~~~~~~a~~~I~~e  126 (175)
T PRK14472         89 IIREGKEYAEKLRAEITEKAHTEAKKMIASAKEEIEQE  126 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444444444332 345567777777777776554

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=86.54  E-value=0.5  Score=46.17  Aligned_cols=71  Identities=24%  Similarity=0.414  Sum_probs=47.2

Q ss_pred             eCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCC-------cccChhhHHHHHHH-cCCCCeecc---CC-
Q 037502           99 VCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSK-------GYAVQSDYKAHLKT-CGTRGHSCD---CG-  166 (426)
Q Consensus        99 ~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k-------~f~~~~~L~~H~~~-h~~kp~~C~---Cg-  166 (426)
                      .|..|.       ..|.+-+.|..|.+..|     -.|.+|++       .|.+-.+|-.|.+. |    |.|.   |. 
T Consensus       222 ~C~FC~-------~~FYdDDEL~~HcR~~H-----E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~  285 (493)
T COG5236         222 LCIFCK-------IYFYDDDELRRHCRLRH-----EACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRV  285 (493)
T ss_pred             hhhhcc-------ceecChHHHHHHHHhhh-----hhhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEec
Confidence            577776       77888888888865444     24555543       47777777777776 5    6662   53 


Q ss_pred             ---cccCChhhHHHHHHHhcCC
Q 037502          167 ---RVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       167 ---k~F~~~~~L~~H~r~h~~~  185 (426)
                         ..|.....|..|+-.-++.
T Consensus       286 ~k~~vf~~~~el~~h~~~~h~~  307 (493)
T COG5236         286 GKCYVFPYHTELLEHLTRFHKV  307 (493)
T ss_pred             CcEEEeccHHHHHHHHHHHhhc
Confidence               4577778888887654443

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=86.53  E-value=0.9  Score=44.43  Aligned_cols=78  Identities=21%  Similarity=0.448  Sum_probs=56.8

Q ss_pred             ccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccc
Q 037502           58 VCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCE  137 (426)
Q Consensus        58 ~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~  137 (426)
                      .|..|.+-|-....|..|+|.-|              ++-|.|..-+   --+...|.+-..|..|++..|     |.|.
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~H--------------E~ChICD~v~---p~~~QYFK~Y~~Le~HF~~~h-----y~ct  279 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRH--------------EACHICDMVG---PIRYQYFKSYEDLEAHFRNAH-----YCCT  279 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhh--------------hhhhhhhccC---ccchhhhhCHHHHHHHhhcCc-----eEEE
Confidence            59999999999999999998764              5545544322   111367888889999986555     7774


Q ss_pred             c--CC----CcccChhhHHHHHHH-cC
Q 037502          138 K--CS----KGYAVQSDYKAHLKT-CG  157 (426)
Q Consensus       138 ~--C~----k~f~~~~~L~~H~~~-h~  157 (426)
                      +  |.    ..|.....|..|+.. |+
T Consensus       280 ~qtc~~~k~~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         280 FQTCRVGKCYVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             EEEEecCcEEEeccHHHHHHHHHHHhh
Confidence            4  42    368888999999877 74

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=86.46  E-value=0.39  Score=47.65  Aligned_cols=50  Identities=26%  Similarity=0.373  Sum_probs=41.4

Q ss_pred             CccccccCCCcccChhhHHHHHHH-cCC-----------------------CCeecc-CC---cccCChhhHHHHHHH
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKT-CGT-----------------------RGHSCD-CG---RVFSRVESFIEHQDA  181 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~-h~~-----------------------kp~~C~-Cg---k~F~~~~~L~~H~r~  181 (426)
                      -|-.|-.|++.|.....-..||.. ||-                       ..|.|- |+   +.|........||..
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            356789999999999999999998 753                       247784 87   999999999999975

>PRK09174 F0F1 ATP synthase subunit B'; Validated

Probab=86.23  E-value=9.7  Score=35.16  Aligned_cols=30  Identities=20%  Similarity=0.315  Sum_probs=14.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhh
Q 037502          360 NAKRIRQQAQAELDKAQALKEHAIKQINSTILR  392 (426)
Q Consensus       360 ~Akr~~e~a~~e~~~a~~~~~~a~~~~~~~~~~  392 (426)
                      ++.++.++|+.+++   .+|+.|+.+|...+.+
T Consensus       146 ea~~~l~~Ae~~I~---~ek~~A~~el~~~a~e  175 (204)
T PRK09174        146 SLEKKLKEAEARIA---AIKAKAMADVGSIAEE  175 (204)
T ss_pred             HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence            34445555554443   3455666555544433

>PRK06231 F0F1 ATP synthase subunit B; Validated

Probab=85.80  E-value=12  Score=34.48  Aligned_cols=55  Identities=18%  Similarity=0.196  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhcch
Q 037502          339 CAEEARQAAKRQIE-LAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCH  396 (426)
Q Consensus       339 ~ae~ar~~Akrq~e-~Ae~e~~~Akr~~e~a~~e~~~a~~~~~~a~~~~~~~~~~~~~~  396 (426)
                      +-++++++|.++++ .-+++..+|.++.++|+.++++.   ++.|+.++...+..+...
T Consensus       119 Ii~~A~~eAe~~~e~i~~~A~~eae~ii~~A~~~Ie~E---k~~a~~~Lk~ei~~lAv~  174 (205)
T PRK06231        119 IIDQANYEALQLKSELEKEANRQANLIIFQARQEIEKE---RRELKEQLQKESVELAML  174 (205)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence            34444445544433 33456677888888888777654   445544444444444333

>TIGR03321 alt_F1F0_F0_B alternate F1F0 ATPase, F0 subunit B

Probab=85.74  E-value=11  Score=35.90  Aligned_cols=43  Identities=12%  Similarity=0.137  Sum_probs=23.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhcchhhhh
Q 037502          355 EQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQ  400 (426)
Q Consensus       355 e~e~~~Akr~~e~a~~e~~~a~~~~~~a~~~~~~~~~~~~~~~~~~  400 (426)
                      +++.++|.+++++|+.+++.   .|+.|++++...+.........+
T Consensus        93 ~~A~~ea~~~~~~a~~~ie~---E~~~a~~~l~~ei~~la~~~A~k  135 (246)
T TIGR03321        93 DEAREEADEIREKWQEALRR---EQAALSDELRRRTGAEVFAIARK  135 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556666777777666554   34555555554444444444443

CC and in principle may run in either direction. This model represents the F0 subunit B of this apparent second ATP synthase.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=85.52  E-value=0.74  Score=27.37  Aligned_cols=20  Identities=20%  Similarity=0.502  Sum_probs=10.4

Q ss_pred             ccccCCCcccChhhHHHHHHH
Q 037502          135 VCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       135 ~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      .|..||+.| ....|..|+++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            455555555 34455555443

>PF06188 HrpE: HrpE/YscL/FliH and V-type ATPase subunit E; InterPro: IPR009335 This family consists of several bacterial HrpE proteins, which are believed to function on the type III secretion system, specifically the secretion of HrpZ (harpinPss) []

Probab=83.95  E-value=12  Score=34.23  Aligned_cols=57  Identities=23%  Similarity=0.252  Sum_probs=27.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhcchh
Q 037502          339 CAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHA  397 (426)
Q Consensus       339 ~ae~ar~~Akrq~e~Ae~e~~~Akr~~e~a~~e~~~a~~~~~~a~~~~~~~~~~~~~~~  397 (426)
                      +=++|.++|.+.++.|+++-  -+..|++|..-+...+.-++.--..+...+-++...+
T Consensus        46 Il~~Ae~eAe~l~~~a~e~a--~~~~~q~a~~ll~~~~~~~e~l~~~l~~~~~~ll~~a  102 (191)
T PF06188_consen   46 ILQQAEEEAEALLEQAYEQA--EAQFWQQANALLQEWQQQREQLLQQLEEQAEELLSQA  102 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44444455555555443322  2334666665555555555544444444444444433

This family also includes V-type proton ATPase subunit E proteins. This subunit appears to form a tight interaction with subunit G in the F0 complex. Subunits E and G may act together as stators to prevent certain subunits from rotating with the central rotary element []. PF01991 from PFAM also contains V-type ATPase subunit E proteins. There is an evolutionary link between type III secretion systems and membrane-associated proton translocating ATPases [].

>TIGR02499 HrpE_YscL_not type III secretion apparatus protein, HrpE/YscL family

Probab=83.79  E-value=13  Score=32.55  Aligned_cols=43  Identities=19%  Similarity=0.176  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhchhhhhhcchhhhhcccCC
Q 037502          363 RIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSR  405 (426)
Q Consensus       363 r~~e~a~~e~~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  405 (426)
                      .-|+.+...+......++...+.+...++++.+...++-+..-
T Consensus        51 ~g~~e~~~~~~~~~~~~~~~~~~~e~~l~~l~~~~~~kil~~~   93 (166)
T TIGR02499        51 QFWQEAAAQLAEWQQEAEQLEASLEERLAELVLQALEQILGEY   93 (166)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4456666667666667777778888888999999988887653

This model is related to Pfam model pfam06188, but is broader. pfam06188 describes HrpE-like proteins, components of bacterial type III secretion systems primarily in bacteria that infect plants. This model includes also the homologous proteins of animal pathogens, such as YscL of Yersinia pestis. This model excludes the related protein FliH of the bacterial flagellar apparatus (see pfam02108)

>PRK05759 F0F1 ATP synthase subunit B; Validated

Probab=82.59  E-value=24  Score=30.76  Aligned_cols=37  Identities=41%  Similarity=0.481  Sum_probs=23.3

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 037502          339 CAEEARQAAKRQIELA-EQEFANAKRIRQQAQAELDKA  375 (426)
Q Consensus       339 ~ae~ar~~Akrq~e~A-e~e~~~Akr~~e~a~~e~~~a  375 (426)
                      +-++++++|.++++.. +.+..+|+++.+.|+.+++..
T Consensus        75 i~~~a~~ea~~~~~~~~~~a~~ea~~~~~~a~~~i~~e  112 (156)
T PRK05759         75 IIEQAKKRAAQIIEEAKAEAEAEAARIKAQAQAEIEQE  112 (156)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4555555666655554 334667788888887777654

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=82.43  E-value=0.82  Score=29.13  Aligned_cols=25  Identities=20%  Similarity=0.596  Sum_probs=18.7

Q ss_pred             cccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcc
Q 037502           17 FSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQG   65 (426)
Q Consensus        17 y~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~   65 (426)
                      |.|.+||..+....                        .++.|++||..
T Consensus         2 ~~C~~CGy~y~~~~------------------------~~~~CP~Cg~~   26 (33)
T cd00350           2 YVCPVCGYIYDGEE------------------------APWVCPVCGAP   26 (33)
T ss_pred             EECCCCCCEECCCc------------------------CCCcCcCCCCc
Confidence            78999997664322                        57999999863

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>CHL00019 atpF ATP synthase CF0 B subunit

Probab=82.39  E-value=21  Score=32.20  Aligned_cols=41  Identities=10%  Similarity=0.215  Sum_probs=21.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhcchhhhh
Q 037502          357 EFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQ  400 (426)
Q Consensus       357 e~~~Akr~~e~a~~e~~~a~~~~~~a~~~~~~~~~~~~~~~~~~  400 (426)
                      +..+|.++.+.|+.+++   ..|+.|++++...+.........+
T Consensus       114 A~~ea~~~~~~a~~~ie---~Ek~~a~~~l~~ei~~lav~~A~k  154 (184)
T CHL00019        114 AKEDLERLENYKNETIR---FEQQRAINQVRQQVFQLALQRALG  154 (184)
T ss_pred             HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455555555555543   345555555555555554444443

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=82.20  E-value=0.77  Score=37.89  Aligned_cols=30  Identities=23%  Similarity=0.525  Sum_probs=24.7

Q ss_pred             cccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCc
Q 037502           17 FSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRD   69 (426)
Q Consensus        17 y~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~   69 (426)
                      ..|+.||+.|..-..                       .|.+|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYDLnk-----------------------~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDLNK-----------------------DPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccCCC-----------------------CCccCCCCCCccCcc
Confidence            589999999966432                       589999999999766

The function of members of this family is unknown.

>PRK06569 F0F1 ATP synthase subunit B'; Validated

Probab=82.03  E-value=24  Score=31.05  Aligned_cols=32  Identities=9%  Similarity=0.106  Sum_probs=14.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037502          340 AEEARQAAKRQIELAEQEFANAKRIRQQAQAE  371 (426)
Q Consensus       340 ae~ar~~Akrq~e~Ae~e~~~Akr~~e~a~~e  371 (426)
                      |++++++|....+..|+++++|+...+.++.|
T Consensus        53 Ae~~k~eAe~l~a~ye~~L~~Ar~eA~~I~~e   84 (155)
T PRK06569         53 ADTLTIEVEKLNKYYNEEIDKTNTEIDRLKKE   84 (155)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44444444444444444444444444444333

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]

Probab=81.81  E-value=0.69  Score=50.60  Aligned_cols=13  Identities=15%  Similarity=0.442  Sum_probs=9.2

Q ss_pred             CCCccccccCCCc
Q 037502          130 NHKQWVCEKCSKG  142 (426)
Q Consensus       130 ~~k~~~C~~C~k~  142 (426)
                      ...|..|+.||..
T Consensus       472 ~~~p~~Cp~Cgs~  484 (730)
T COG1198         472 EPIPQSCPECGSE  484 (730)
T ss_pred             CCCCCCCCCCCCC
Confidence            5567888888754

>PRK08475 F0F1 ATP synthase subunit B; Validated

Probab=81.54  E-value=24  Score=31.39  Aligned_cols=35  Identities=11%  Similarity=0.114  Sum_probs=16.8

Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 037502          339 CAEEARQAAKRQIEL-AEQEFANAKRIRQQAQAELD  373 (426)
Q Consensus       339 ~ae~ar~~Akrq~e~-Ae~e~~~Akr~~e~a~~e~~  373 (426)
                      +-++|+++|..+++. -+++.++|+++.+.|+.+.+
T Consensus        93 Ii~~A~~eAe~~~~~ii~~A~~ea~~~~~~a~~~ie  128 (167)
T PRK08475         93 IVETAKKEAYILTQKIEKQTKDDIENLIKSFEELME  128 (167)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333444444444332 23445556666666655443

>CHL00118 atpG ATP synthase CF0 B' subunit; Validated

Probab=81.47  E-value=28  Score=30.53  Aligned_cols=36  Identities=17%  Similarity=0.203  Sum_probs=17.3

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 037502          339 CAEEARQAAKRQIELA-EQEFANAKRIRQQAQAELDK  374 (426)
Q Consensus       339 ~ae~ar~~Akrq~e~A-e~e~~~Akr~~e~a~~e~~~  374 (426)
                      +-+++++.|+++++.+ +.+.++|.++.+.|+.++++
T Consensus        93 ii~~A~~~a~~~~~~~~~~A~~ea~~~~~~a~~~i~~  129 (156)
T CHL00118         93 EITQSQKEAKEIVENELKQAQKYIDSLLNEATKQLEA  129 (156)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344444444443332 23445566666666665543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=81.10  E-value=0.71  Score=32.89  Aligned_cols=29  Identities=21%  Similarity=0.530  Sum_probs=19.7

Q ss_pred             CCCCccccccCCCcccChhhHHHHHHH-cC
Q 037502          129 SNHKQWVCEKCSKGYAVQSDYKAHLKT-CG  157 (426)
Q Consensus       129 ~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~  157 (426)
                      .|+.-+.|+.||..|....++.+|... |+
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            356667777777777777777777666 53

>PRK14473 F0F1 ATP synthase subunit B; Provisional

Probab=80.89  E-value=25  Score=31.06  Aligned_cols=33  Identities=21%  Similarity=0.453  Sum_probs=18.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhh
Q 037502          356 QEFANAKRIRQQAQAELDKAQALKEHAIKQINSTIL  391 (426)
Q Consensus       356 ~e~~~Akr~~e~a~~e~~~a~~~~~~a~~~~~~~~~  391 (426)
                      .+..+|.++.+.|+.++++.   |+.|+.++.+.+.
T Consensus        97 ~A~~ea~~~~~~a~~~I~~e---k~~a~~~L~~~i~  129 (164)
T PRK14473         97 QARREAEKIKEEARAQAEQE---RQRMLSELKSQIA  129 (164)
T ss_pred             HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence            34556666777676666443   4455555444433

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=80.62  E-value=0.47  Score=44.01  Aligned_cols=49  Identities=24%  Similarity=0.438  Sum_probs=34.6

Q ss_pred             CccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhh
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKH  128 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H  128 (426)
                      |+| |..|++.|....-|..|++..                 .|+|.+|-       +.+.+--.|..|-+.+|
T Consensus        10 kpw-cwycnrefddekiliqhqkak-----------------hfkchich-------kkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQKAK-----------------HFKCHICH-------KKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhhhc-----------------cceeeeeh-------hhhccCCCceeehhhhh
Confidence            444 889999999988888887654                 48888887       55555555666644444

>PRK13453 F0F1 ATP synthase subunit B; Provisional

Probab=80.60  E-value=29  Score=31.00  Aligned_cols=49  Identities=31%  Similarity=0.411  Sum_probs=25.3

Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhh
Q 037502          339 CAEEARQAAKRQIELA-EQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTI  390 (426)
Q Consensus       339 ~ae~ar~~Akrq~e~A-e~e~~~Akr~~e~a~~e~~~a~~~~~~a~~~~~~~~  390 (426)
                      +-++++++|.++++.. +++.++|.++.+.|+.++++.   |+.|+.++...+
T Consensus        89 ii~~a~~~a~~~~~~~~~~A~~ea~~~~~~A~~~I~~e---k~~a~~~l~~ei  138 (173)
T PRK13453         89 ILEDAKVQARQQQEQIIHEANVRANGMIETAQSEINSQ---KERAIADINNQV  138 (173)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence            4444455444443322 334566777777777766543   444444444333

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=80.37  E-value=1.1  Score=39.85  Aligned_cols=25  Identities=32%  Similarity=0.691  Sum_probs=20.4

Q ss_pred             cceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCC
Q 037502           96 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSK  141 (426)
Q Consensus        96 k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k  141 (426)
                      +.|+|++||                     -+|-|+-|.+|++||-
T Consensus       133 ~~~vC~vCG---------------------y~~~ge~P~~CPiCga  157 (166)
T COG1592         133 KVWVCPVCG---------------------YTHEGEAPEVCPICGA  157 (166)
T ss_pred             CEEEcCCCC---------------------CcccCCCCCcCCCCCC
Confidence            389999998                     2356799999999983

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	426
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 57  YVCEICNQGFQRDQNLQMHRRRH--KVPWK-------------LLKRETPVVRKRVFVCP 101
           Y C  C + F R  +L  H+R H  + P+K             L + +     ++ + CP
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81
Query: 102 EPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRG 160
           E          +      ++ H +R H+  K + C +C K ++  +  +AH +T  G + 
Sbjct: 82  ECG-------KSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKP 133
Query: 161 HSC-DCGRVFSRVESFIEHQ 179
           + C +CG+ FSR ++   HQ
Sbjct: 134 YKCPECGKSFSREDNLHTHQ 153

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	426
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
3lnn_A	359	Membrane fusion protein (MFP) heavy metal cation Z	4e-05
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	4e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 4e-05
 Identities = 65/434 (14%), Positives = 125/434 (28%), Gaps = 115/434 (26%)

Query: 32  RPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETP 91
             A   + D + V   PK++L S   +  I       D      R    + W LL ++  
Sbjct: 26  EDAFVDNFDCKDVQDMPKSIL-SKEEIDHIIMSK---DAVSGTLR----LFWTLLSKQEE 77

Query: 92  VVRKRVFV------------------CPEPSCL------HHDPCHALGDLVGIKKHFRR- 126
           +V+K  FV                    +PS +        D  +    +   K +  R 
Sbjct: 78  MVQK--FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF-AKYNVSRL 134

Query: 127 -KHSNHKQWVCE-KCSKGYAVQSDYKAHLKTCGTRGHSCDCGR---VFSRVESFIEHQDA 181
             +   +Q + E + +K   +           G  G     G+         S+      
Sbjct: 135 QPYLKLRQALLELRPAKNVLID----------GVLG----SGKTWVALDVCLSYKVQCKM 180

Query: 182 CSK------GHIRSEQQGLQQQPAACL-------SRTASSPSPSSDTNFSASHWPNLMVP 228
             K       +  S +  L+              SR+  S +     +   +    L+  
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240

Query: 229 KVPTIDTMFLNRIHQGDKSTRNVKHHNLELQLLTTSNPIDVSDDSPKRDHDHNHSTQLQL 288
           K      + L  +    ++ +     NL  ++L T+    V+D           +T + L
Sbjct: 241 KPYENCLLVLLNV----QNAKAWNAFNLSCKILLTTRFKQVTDFL-----SAATTTHISL 291

Query: 289 SIGSSDISEKNELNVTYLSSTTNGKPAMDIASRLKEQAREQ--LRLAMAEKACAEEARQA 346
              S  ++     ++  L    + +P       L  +       RL++     AE  R  
Sbjct: 292 DHHSMTLTPDEVKSL--LLKYLDCRP-----QDLPREVLTTNPRRLSI----IAESIRD- 339

Query: 347 AKRQIELAEQEFANAKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQ--S 404
                                     DK   + E ++  +     R       + F   S
Sbjct: 340 -------------GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR-------KMFDRLS 379

Query: 405 RLPPDEN--SLVLS 416
             PP  +  +++LS
Sbjct: 380 VFPPSAHIPTILLS 393

>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans} Length = 359

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 9/72 (12%)

Query: 312 GKPAMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIEL------AEQEFANAKRIR 365
           G     I S    QA      A A       AR+   RQ EL      A+++F  A+   
Sbjct: 82  GDVLFTIDSADLAQANSDAAKARAA---MTMARRNLDRQRELDKSEIAAKRDFEQAQSDY 138

Query: 366 QQAQAELDKAQA 377
            QA +E  +A A
Sbjct: 139 DQAASESQRADA 150

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 40.5 bits (94), Expect = 4e-04
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 14/76 (18%)

Query: 322 LKEQAREQ-LRLAM---AEKACAEEARQAAKRQIELAEQEFANAKRIRQQAQAELDKAQA 377
           +++   EQ  RL     A K   +E R+ AK+ +E    E+      RQ  Q E +K   
Sbjct: 87  IRKWREEQRKRLQELDAASKVMEQEWREKAKKDLE----EWNQ----RQSEQVEKNKINN 138

Query: 378 LK--EHAIKQINSTIL 391
               +   +Q ++ I+
Sbjct: 139 RIADKAFYQQPDADII 154

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 4/58 (6%)

Query: 126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRG---HSC-DCGRVFSRVESFIEHQ 179
                   + C+ CS+ Y   S++  H  T   R    + C  C + F+R ++   H 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	426
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.91
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.9
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.87
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.84
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.83
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.82
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.8
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.79
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.71
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.68
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.68
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.66
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.66
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.66
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.66
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.64
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.64
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.64
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.64
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.59
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.56
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.56
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.55
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.54
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.53
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.52
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.51
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.5
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.49
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.45
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.44
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.44
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.44
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.43
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.42
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.41
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.4
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.4
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.39
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.38
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.38
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.37
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.36
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.35
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.35
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.34
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.34
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.33
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.32
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.3
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.3
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.3
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.29
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.29
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.28
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.26
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.25
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.19
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.18
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.17
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.17
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.14
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.13
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.1
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.02
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.02
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.0
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.0
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.0
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.98
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.97
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.97
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.96
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.94
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.94
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.94
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.93
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.93
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.93
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.92
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.92
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.9
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.9
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.89
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.87
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.86
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.85
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.85
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.84
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.83
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.83
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.82
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.82
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.81
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.81
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.8
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.79
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.77
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.77
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.77
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.76
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.74
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.68
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.68
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.67
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.67
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.66
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.66
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.65
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.65
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.64
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.64
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.63
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.6
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.6
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.59
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.59
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.57
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.54
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.54
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.54
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.51
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.4
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.4
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.39
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.37
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.26
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.26
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.22
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.18
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.16
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.16
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.1
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.05
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.05
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.04
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.03
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.01
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.97
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.94
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.94
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.94
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.93
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.92
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.92
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.91
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.91
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.87
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.86
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.82
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.79
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.78
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.77
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.95
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.75
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.75
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.75
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.73
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.9
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.71
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.71
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.89
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.7
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.64
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.63
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.63
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.62
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.61
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.56
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.51
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.51
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.45
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.45
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.44
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.56
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.43
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.41
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.47
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.47
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.32
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.15
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.98
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.9
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.96
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.84
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.27
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.1
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.49
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.31
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.43
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.33
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.02
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	85.96
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	83.68
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	83.67
2b5u_A	551	Colicin E3; high resolution colicin E3, ribosome i	80.55

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.95  E-value=1.4e-29  Score=229.59  Aligned_cols=162  Identities=23%  Similarity=0.549  Sum_probs=97.2

Q ss_pred             CCCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCc----------------chhccCccccCCCCccccccCCcccC
Q 037502            4 NNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDA----------------EVVSLSPKTLLESDRYVCEICNQGFQ   67 (426)
Q Consensus         4 ~~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~----------------~~l~~h~~~h~~~~py~C~~Cgk~F~   67 (426)
                      +..|..++.+++||.|..|++.|.....|..|++.|.+                ..|..|+++|.++++|.|++|++.|.
T Consensus         9 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   88 (190)
T 2i13_A            9 SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFS   88 (190)
T ss_dssp             ----------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             chhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccC
Confidence            46678889999999999999999998886666554432                12555666666666666666666666


Q ss_pred             CchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChh
Q 037502           68 RDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS  147 (426)
Q Consensus        68 ~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~  147 (426)
                      ....|..|+++|             .++++|.|+.|+       +.|.....|..| +++|.++++|.|.+|++.|....
T Consensus        89 ~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~  147 (190)
T 2i13_A           89 QRANLRAHQRTH-------------TGEKPYACPECG-------KSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSRED  147 (190)
T ss_dssp             CHHHHHHHHHHH-------------HTCCCEECTTTC-------CEESSHHHHHHH-HHHHHCCCCEECTTTCCEESCHH
T ss_pred             CHHHHHHHHHhc-------------CCCCCCcCCCCC-------CccCCHHHHHHH-HHHhCCCCCeECCCCCcccCCHH
Confidence            666666666666             466778888877       778888888888 46777778888888888888888


Q ss_pred             hHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHhcCCC
Q 037502          148 DYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDACSKGH  186 (426)
Q Consensus       148 ~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~~  186 (426)
                      .|..|+++ +++++|.|+ |++.|.....|..|+++|+++.
T Consensus       148 ~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          148 NLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             HHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC----
T ss_pred             HHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCC
Confidence            88888877 577788885 8888888888888888777654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.91  E-value=9.8e-25  Score=197.54  Aligned_cols=144  Identities=24%  Similarity=0.448  Sum_probs=127.8

Q ss_pred             CCCCCCCCccc--ccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccc--ccCCcccCCchhHHHHhhhccCccc
Q 037502            9 AIPCSSEPFSC--LENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC--EICNQGFQRDQNLQMHRRRHKVPWK   84 (426)
Q Consensus         9 ~~~~~~kpy~C--~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C--~~Cgk~F~~~~~L~~H~r~H~~~~~   84 (426)
                      .++...++|.|  ..||+.|.....            |..|+++|.++++|.|  ++|++.|.....|..|+++|     
T Consensus         5 ~~~~~~~~~~C~~~~C~~~f~~~~~------------L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-----   67 (190)
T 1tf6_A            5 ALPVVYKRYICSFADCGAAYNKNWK------------LQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH-----   67 (190)
T ss_dssp             -----CCCCBCSSTTTCCBCSSHHH------------HHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTT-----
T ss_pred             cccCCCcceeCCCCCCcchhCCHHH------------HHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHc-----
Confidence            45677899999  789999998886            8888899999999999  88999999999999999999     


Q ss_pred             cccccCccccCcceeCC--CCCCCCCCcccccCCHHHHHHHHHhhh-CCCCcccc--ccCCCcccChhhHHHHHHH-cCC
Q 037502           85 LLKRETPVVRKRVFVCP--EPSCLHHDPCHALGDLVGIKKHFRRKH-SNHKQWVC--EKCSKGYAVQSDYKAHLKT-CGT  158 (426)
Q Consensus        85 ~~~~~~~~~~~k~~~C~--~C~c~~~~~~~~f~~~~~l~~H~~r~H-~~~k~~~C--~~C~k~f~~~~~L~~H~~~-h~~  158 (426)
                              .++++|.|+  .|+       +.|.....|..|+.+.| .++++|.|  +.|++.|.....|..|+++ +++
T Consensus        68 --------~~~~~~~C~~~~C~-------~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~  132 (190)
T 1tf6_A           68 --------TGEKNFTCDSDGCD-------LRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ  132 (190)
T ss_dssp             --------TTCCCEECCSSSCC-------CEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSS
T ss_pred             --------cCCCceeCCCCCCC-------CccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCC
Confidence                    678999999  777       99999999999976788 57889999  8899999999999999999 589


Q ss_pred             CCeec-c--CCcccCChhhHHHHHHHhcC
Q 037502          159 RGHSC-D--CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       159 kp~~C-~--Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      +||.| .  |++.|.....|..|+++|++
T Consensus       133 ~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          133 LPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             CSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             CCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            99999 3  99999999999999999876

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.90  E-value=9.6e-25  Score=197.58  Aligned_cols=147  Identities=20%  Similarity=0.422  Sum_probs=131.6

Q ss_pred             CCCCCCCCCCCCccc--ccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccc--cCCcccCCchhHHHHh-hhc
Q 037502            5 NSPSAIPCSSEPFSC--LENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE--ICNQGFQRDQNLQMHR-RRH   79 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C--~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~--~Cgk~F~~~~~L~~H~-r~H   79 (426)
                      ..|+.+|.+++||.|  ..||+.|.....            |..|+++|.++++|.|+  .|++.|.+...|..|+ +.|
T Consensus        31 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~------------l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h   98 (190)
T 1tf6_A           31 QAHLCKHTGEKPFPCKEEGCEKGFTSLHH------------LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH   98 (190)
T ss_dssp             HHHHHHHHCCCSSCCSSTTCCCCCSSHHH------------HHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTS
T ss_pred             HHHHHhcCCCCCccCCCCCCChhhCCHHH------------HHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhc
Confidence            456777889999999  889999999886            88888899999999999  8999999999999999 566


Q ss_pred             cCccccccccCccccCcceeC--CCCCCCCCCcccccCCHHHHHHHHHhhhCCCCcccccc--CCCcccChhhHHHHHHH
Q 037502           80 KVPWKLLKRETPVVRKRVFVC--PEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK--CSKGYAVQSDYKAHLKT  155 (426)
Q Consensus        80 ~~~~~~~~~~~~~~~~k~~~C--~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~  155 (426)
                      .            .++++|.|  +.|+       +.|.....|..| +++|+++++|.|.+  |++.|.....|..|+++
T Consensus        99 ~------------~~~~~~~C~~~~C~-------k~f~~~~~L~~H-~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~  158 (190)
T 1tf6_A           99 N------------IKICVYVCHFENCG-------KAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV  158 (190)
T ss_dssp             S------------TTTSCCEECSSSSC-------EECSSHHHHHHH-HGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTS
T ss_pred             C------------CCcceeeCCCCCCc-------cccCCHHHHHHH-HHHhCCCCCccCCCCCCCchhcCHHHHHHHHHH
Confidence            3            46789999  8888       999999999999 58999999999988  99999999999999999


Q ss_pred             cCCCCeec-c---CCcccCChhhHHHHHHHhcCC
Q 037502          156 CGTRGHSC-D---CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       156 h~~kp~~C-~---Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      |..  |.| .   |++.|.....|..|+++|+++
T Consensus       159 H~~--~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          159 HAG--YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             SCS--CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             hCC--CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            533  888 5   999999999999999998763

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=5.5e-24  Score=185.85  Aligned_cols=138  Identities=21%  Similarity=0.386  Sum_probs=124.6

Q ss_pred             CCCcccccccccccCcCCCCCCCCCCCcchhccCcc---ccCCCCccccccC-----CcccCCchhHHHHhhhccCcccc
Q 037502           14 SEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPK---TLLESDRYVCEIC-----NQGFQRDQNLQMHRRRHKVPWKL   85 (426)
Q Consensus        14 ~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~---~h~~~~py~C~~C-----gk~F~~~~~L~~H~r~H~~~~~~   85 (426)
                      |.+|.|..||+.|.....            |..|++   +|.++++|+|+.|     ++.|.....|..|+++|      
T Consensus         1 E~~~~C~~C~~~f~~~~~------------L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h------   62 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQ------------LVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH------   62 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHH------------HHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHH------
T ss_pred             CCcCCcCCCccccCCHHH------------HHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhc------
Confidence            458999999999999887            777776   7889999998753     49999999999999999      


Q ss_pred             ccccCccccCcceeCCC--CCCCCCCcccccCCHHHHHHHHHhhhCCCCcccccc--CCCcccChhhHHHHH-HHc-CCC
Q 037502           86 LKRETPVVRKRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK--CSKGYAVQSDYKAHL-KTC-GTR  159 (426)
Q Consensus        86 ~~~~~~~~~~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~--C~k~f~~~~~L~~H~-~~h-~~k  159 (426)
                             .++++|.|++  |+       +.|.....|..|+ ++|.++++|.|++  |++.|.....|..|+ ++| +++
T Consensus        63 -------~~~~~~~C~~~~C~-------~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~  127 (155)
T 2gli_A           63 -------TGEKPHKCTFEGCR-------KSYSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK  127 (155)
T ss_dssp             -------HCCCCCCCCSTTCC-------CCCSSHHHHHHHH-HHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCC
T ss_pred             -------CCCCCccCCCCCCC-------CcccCHHHHHHHH-HHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence                   6789999986  77       9999999999994 7899999999998  999999999999999 555 899


Q ss_pred             Ceecc---CCcccCChhhHHHHHHHhcC
Q 037502          160 GHSCD---CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       160 p~~C~---Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      +|.|+   |++.|.....|..|+++|+|
T Consensus       128 ~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          128 PYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            99993   99999999999999999875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=9.9e-23  Score=174.67  Aligned_cols=109  Identities=16%  Similarity=0.248  Sum_probs=99.5

Q ss_pred             hccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHH
Q 037502           44 VSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKH  123 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H  123 (426)
                      +..|.++|.|+++|+|++||+.|.....|..|+++|             .++++|.|++|+       +.|.....|..|
T Consensus        10 ~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~C~-------k~F~~~~~L~~H   69 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIH-------------SWEKKYPCRYCE-------KVFPLAEYRTKH   69 (133)
T ss_dssp             SSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHH-------------HCCSCEECSSSS-------CEESSHHHHHHH
T ss_pred             HhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHc-------------CCCCCeeCCccC-------eecccccchhhh
Confidence            445678899999999999999999999999999999             789999999999       999999999999


Q ss_pred             HHhhhCCCCccccccCCCcccChhhHHHHHHH-cCCC------Ceecc-CCcccCChh
Q 037502          124 FRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTR------GHSCD-CGRVFSRVE  173 (426)
Q Consensus       124 ~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~k------p~~C~-Cgk~F~~~~  173 (426)
                       +++|+|+++|.|++||+.|.....|..|+++ |+++      +|.|. |++.|....
T Consensus        70 -~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           70 -EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             -HHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             -ccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcc
Confidence             5899999999999999999999999999999 7764      58886 999997643

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.87  E-value=3.2e-22  Score=180.92  Aligned_cols=126  Identities=25%  Similarity=0.604  Sum_probs=113.0

Q ss_pred             CcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHH
Q 037502           40 DAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVG  119 (426)
Q Consensus        40 ~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~  119 (426)
                      ....|..|+++|.++++|+|++||+.|.....|..|+++|             .++++|.|+.|+       +.|.....
T Consensus        33 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~   92 (190)
T 2i13_A           33 RSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTH-------------TGEKPYKCPECG-------KSFSQRAN   92 (190)
T ss_dssp             SSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHH-------------HCCCCEECTTTC-------CEESCHHH
T ss_pred             CHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhc-------------CCCCCccCcccC-------CccCCHHH
Confidence            3345888999999999999999999999999999999999             678999999998       99999999


Q ss_pred             HHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHhcCCC
Q 037502          120 IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDACSKGH  186 (426)
Q Consensus       120 l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~~  186 (426)
                      |..| ++.|.++++|.|.+|++.|.....|..|+++ +++++|.|+ |++.|.....|..|+++|+++.
T Consensus        93 l~~H-~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  160 (190)
T 2i13_A           93 LRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK  160 (190)
T ss_dssp             HHHH-HHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCC
T ss_pred             HHHH-HHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            9999 5789999999999999999999999999999 699999997 9999999999999999998765

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=1.4e-21  Score=163.65  Aligned_cols=112  Identities=19%  Similarity=0.433  Sum_probs=97.9

Q ss_pred             CCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHh--hhC
Q 037502           52 LESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRR--KHS  129 (426)
Q Consensus        52 ~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r--~H~  129 (426)
                      +++++|+|++|++.|.....|..|+++|             .++++|.|++|+       +.|.....|..|+..  .|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H~~~~~~~~   62 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKH-------------TGEKPFECPKCG-------KCYFRKENLLEHEARNCMNR   62 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHH-------------SSCCSCBCTTTC-------CBCSSHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhC-------------CCCCCeECCCCC-------chhcCHHHHHHHHhhhhcCC
Confidence            4678899999999999999999999998             578899999988       899999999999644  367


Q ss_pred             CCCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHhc
Q 037502          130 NHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDACS  183 (426)
Q Consensus       130 ~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~  183 (426)
                      ++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.....|..|++..+
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence            88999999999999999999999998 689999996 9999999999999998543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=1.7e-21  Score=162.11  Aligned_cols=110  Identities=25%  Similarity=0.657  Sum_probs=101.5

Q ss_pred             CCCCcccccc--CCcccCCchhHHHHhhhccCccccccccCccccCcceeCC--CCCCCCCCcccccCCHHHHHHHHHhh
Q 037502           52 LESDRYVCEI--CNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP--EPSCLHHDPCHALGDLVGIKKHFRRK  127 (426)
Q Consensus        52 ~~~~py~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~--~C~c~~~~~~~~f~~~~~l~~H~~r~  127 (426)
                      +++++|+|.+  |++.|.....|..|+++|             .++++|.|+  .|+       +.|.....|..| +++
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~~~C~-------~~f~~~~~l~~H-~~~   60 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKH-------------TGEKPYQCDFKDCE-------RRFSRSDQLKRH-QRR   60 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHH-------------HTTCCEECCSTTCC-------CEESSHHHHHHH-HHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhh-------------CCCCCccCCCCCCc-------CccCCHHHHHHH-HHH
Confidence            4678999997  999999999999999999             678999999  677       999999999999 478


Q ss_pred             hCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec--c-CCcccCChhhHHHHHHHh
Q 037502          128 HSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC--D-CGRVFSRVESFIEHQDAC  182 (426)
Q Consensus       128 H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C--~-Cgk~F~~~~~L~~H~r~h  182 (426)
                      |.++++|.|.+|++.|.....|..|+++ +++++|.|  . |++.|.....|..|+++|
T Consensus        61 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           61 HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             cCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999999999999999999 69999999  5 999999999999999876

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.1e-21  Score=164.30  Aligned_cols=117  Identities=16%  Similarity=0.362  Sum_probs=106.7

Q ss_pred             CCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccC
Q 037502           11 PCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRET   90 (426)
Q Consensus        11 ~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~   90 (426)
                      .+++++|.|.+|++.|.....            |..|+++|.++++|+|++|++.|.+...|..|++.|+..        
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~------------l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~--------   61 (124)
T 2dlq_A            2 SSGSSGVECPTCHKKFLSKYY------------LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN--------   61 (124)
T ss_dssp             CCCCSSCCCTTTCCCCSSHHH------------HHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCC--------
T ss_pred             CCCCCCCCCCCCCCcCCCHHH------------HHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcC--------
Confidence            367899999999999998886            888899999999999999999999999999999975211        


Q ss_pred             ccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cC
Q 037502           91 PVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CG  157 (426)
Q Consensus        91 ~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~  157 (426)
                        .++++|.|++|+       +.|.....|..| +++|.++++|.|.+|++.|.....|..|++. |+
T Consensus        62 --~~~~~~~C~~C~-------~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           62 --RSEQVFTCSVCQ-------ETFRRRMELRLH-MVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             --SCCCCEECSSSC-------CEESSHHHHHHH-HHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             --CCCCCeECCCCC-------CccCCHHHHHHH-HHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence              578999999999       999999999999 4889999999999999999999999999997 74

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.84  E-value=1.3e-21  Score=162.84  Aligned_cols=113  Identities=23%  Similarity=0.476  Sum_probs=105.2

Q ss_pred             CCCCCCccccc--ccccccCcCCCCCCCCCCCcchhccCccccCCCCccccc--cCCcccCCchhHHHHhhhccCccccc
Q 037502           11 PCSSEPFSCLE--NGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE--ICNQGFQRDQNLQMHRRRHKVPWKLL   86 (426)
Q Consensus        11 ~~~~kpy~C~~--Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~~   86 (426)
                      ++++++|.|..  ||+.|.....            |..|+++|.++++|.|+  .|++.|.+...|..|+++|       
T Consensus         1 a~~~~~~~C~~~~C~~~f~~~~~------------l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-------   61 (119)
T 2jp9_A            1 ASEKRPFMCAYPGCNKRYFKLSH------------LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH-------   61 (119)
T ss_dssp             CCSSCCBCCCSTTSCCCBSCHHH------------HHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHH-------
T ss_pred             CCCCeeeeCCCCCCcchhCCHHH------------HHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHc-------
Confidence            35789999987  9999999886            88888999999999999  7999999999999999999       


Q ss_pred             cccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCcccc--ccCCCcccChhhHHHHHHHc
Q 037502           87 KRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVC--EKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus        87 ~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~h  156 (426)
                            .++++|.|++|+       +.|.....|..| +++|+++++|.|  +.|++.|.....|..|+++|
T Consensus        62 ------~~~~~~~C~~C~-------~~f~~~~~l~~H-~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           62 ------TGVKPFQCKTCQ-------RKFSRSDHLKTH-TRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             ------HCCCCEECTTTC-------CEESCHHHHHHH-HHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             ------CCCCCccCCccC-------chhCCHHHHHHH-HHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence                  678999999999       999999999999 578999999999  78999999999999999864

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.83  E-value=2.6e-22  Score=172.02  Aligned_cols=111  Identities=14%  Similarity=0.153  Sum_probs=99.0

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK   84 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~   84 (426)
                      .-|..+|.|+++|.|.+||+.|.....            |..|+++|++++||+|++||+.|.+...|..|+++|     
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-----   73 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTS------------LRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHH-----   73 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHH------------HHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHH-----
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHH------------HHHHHHHcCCCCCeeCCccCeecccccchhhhcccc-----
Confidence            445678899999999999999999886            889999999999999999999999999999999999     


Q ss_pred             cccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC------CccccccCCCcccChhh
Q 037502           85 LLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH------KQWVCEKCSKGYAVQSD  148 (426)
Q Consensus        85 ~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~------k~~~C~~C~k~f~~~~~  148 (426)
                              +++++|.|++|+       +.|.....|..|+ ++|.++      ++|+|.+|++.|.....
T Consensus        74 --------~~~k~~~C~~C~-------k~F~~~~~L~~H~-~~hh~~~p~~~~k~~~C~~C~k~~~~~~~  127 (133)
T 2lt7_A           74 --------TGERRYQCLACG-------KSFINYQFMSSHI-KSVHSQDPSGDSKLYRLHPCRSLQIRQYA  127 (133)
T ss_dssp             --------HTCCCEEESSSC-------CEESSHHHHHHHH-HHHTCCCTTSSSCCEEECCCCSSCCCCCH
T ss_pred             --------CCCccccCCCCC-------CCcCCHHHHHHHh-HHhcCCCCCCCCCCeecCCCCchhhhccc
Confidence                    789999999999       9999999999996 555444      56999999999886543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.83  E-value=2.8e-21  Score=168.84  Aligned_cols=117  Identities=21%  Similarity=0.345  Sum_probs=91.0

Q ss_pred             cCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCc--------ceeCCCCCCCCCCcccccCCHHHHHH
Q 037502           51 LLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKR--------VFVCPEPSCLHHDPCHALGDLVGIKK  122 (426)
Q Consensus        51 h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k--------~~~C~~C~c~~~~~~~~f~~~~~l~~  122 (426)
                      +.+..+|.|++|++.|.+...|..|+++++            .+++        .|.|+.|+       +.|.....|..
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H------------~~~~~~~~~~~~~~~C~~C~-------~~f~~~~~l~~   80 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEH------------VGGPEQNNHVCYWEECPREG-------KSFKAKYKLVN   80 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTT------------SCCTTCSSCCCCBTTCTTSS-------CCCSSHHHHHH
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhc------------CCCcccCCccccccCCCCcc-------cccCCHHHHHH
Confidence            344567888888888888888888888732            2222        27788877       88888888888


Q ss_pred             HHHhhhCCCCcccccc--CCCcccChhhHHHHHHH-cCCCCeecc---CCcccCChhhHHHHHHHhcCCCC
Q 037502          123 HFRRKHSNHKQWVCEK--CSKGYAVQSDYKAHLKT-CGTRGHSCD---CGRVFSRVESFIEHQDACSKGHI  187 (426)
Q Consensus       123 H~~r~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-h~~kp~~C~---Cgk~F~~~~~L~~H~r~h~~~~~  187 (426)
                      | +++|.++++|.|.+  |++.|.....|..|+++ +++++|.|.   |++.|.....|..|+++|+++.+
T Consensus        81 H-~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~  150 (155)
T 2rpc_A           81 H-IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS  150 (155)
T ss_dssp             H-THHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCC
T ss_pred             H-HHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            8 46788888888887  88888888888888888 578888885   88888888888888888877654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=1.8e-20  Score=157.30  Aligned_cols=112  Identities=25%  Similarity=0.549  Sum_probs=92.7

Q ss_pred             CCCccccc--cCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCC
Q 037502           53 ESDRYVCE--ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSN  130 (426)
Q Consensus        53 ~~~py~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~  130 (426)
                      +.++|+|+  .|++.|.+...|..|+++|              ++++|.|+.|+       +.|.....|..| +++|.+
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h--------------~~~~~~C~~C~-------~~f~~~~~l~~H-~~~h~~   59 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH--------------GPRVHVCAECG-------KAFVESSKLKRH-QLVHTG   59 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG--------------SCCCEECTTTC-------CEESSHHHHHHH-GGGTSC
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc--------------CCCCeECCCCC-------chhCCHHHHHHH-HHHcCC
Confidence            35678898  8999999999999998888              36789999988       889999999999 578888


Q ss_pred             CCcccccc--CCCcccChhhHHHHHHH-cCCCCeec--c-CCcccCChhhHHHHHHHhcCCC
Q 037502          131 HKQWVCEK--CSKGYAVQSDYKAHLKT-CGTRGHSC--D-CGRVFSRVESFIEHQDACSKGH  186 (426)
Q Consensus       131 ~k~~~C~~--C~k~f~~~~~L~~H~~~-h~~kp~~C--~-Cgk~F~~~~~L~~H~r~h~~~~  186 (426)
                      +++|.|.+  |++.|.....|..|+++ +++++|.|  + |++.|.....|..|+++|+++.
T Consensus        60 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           60 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            99999975  99999999999999988 58889999  3 9999999999999999987764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.82  E-value=6.6e-21  Score=159.98  Aligned_cols=115  Identities=19%  Similarity=0.391  Sum_probs=99.6

Q ss_pred             CCCCcccc--cccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccC
Q 037502           13 SSEPFSCL--ENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRET   90 (426)
Q Consensus        13 ~~kpy~C~--~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~   90 (426)
                      +.++|.|.  .||+.|.....            |..|+++| ++++|+|++|++.|.....|..|+++|           
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~------------l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h-----------   57 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSA------------MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVH-----------   57 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHH------------HHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGT-----------
T ss_pred             CCCcccCCCCCCcCccCCHHH------------HHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHc-----------
Confidence            46799999  89999999886            78888888 889999999999999999999999999           


Q ss_pred             ccccCcceeCCC--CCCCCCCcccccCCHHHHHHHHHhhhCCCCccccc--cCCCcccChhhHHHHHHH-cCCCCe
Q 037502           91 PVVRKRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCE--KCSKGYAVQSDYKAHLKT-CGTRGH  161 (426)
Q Consensus        91 ~~~~~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~-h~~kp~  161 (426)
                        .++++|.|.+  |+       +.|.....|..| +++|.++++|.|.  .|++.|.....|..|+++ ++++++
T Consensus        58 --~~~~~~~C~~~~C~-------~~f~~~~~l~~H-~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           58 --TGEKPFQCTFEGCG-------KRFSLDFNLRTH-VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             --SCCCCEECCSTTCC-------CEESCHHHHHHH-HHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             --CCCCCeeCCCCCCc-------CccCCHHHHHHH-HHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence              6889999986  87       999999999999 5889999999995  599999999999999999 577765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.80  E-value=7.8e-20  Score=159.58  Aligned_cols=123  Identities=19%  Similarity=0.283  Sum_probs=112.3

Q ss_pred             CCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccc-cCCCCc--------cccccCCcccCCchhHHHHhhhc
Q 037502            9 AIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKT-LLESDR--------YVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus         9 ~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~-h~~~~p--------y~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      .++....+|.|..||+.|.....            |..|+++ |.+..+        |.|++|++.|.....|..|+++|
T Consensus        18 ~~~~~~~~~~C~~C~~~f~~~~~------------L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h   85 (155)
T 2rpc_A           18 WIDEAQLSRPKKSCDRTFSTMHE------------LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH   85 (155)
T ss_dssp             BCCTTCCSSSCCCCCCCBSSHHH------------HHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHH
T ss_pred             eechhhcccccccCCcccCCHHH------------HHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhc
Confidence            35667789999999999999987            8888887 888765        89999999999999999999999


Q ss_pred             cCccccccccCccccCcceeCCC--CCCCCCCcccccCCHHHHHHHHHhhhCCCCcccccc--CCCcccChhhHHHHHHH
Q 037502           80 KVPWKLLKRETPVVRKRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK--CSKGYAVQSDYKAHLKT  155 (426)
Q Consensus        80 ~~~~~~~~~~~~~~~~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~  155 (426)
                                   .++++|.|.+  |+       +.|.....|..| +++|+++++|.|.+  |++.|.....|..|+++
T Consensus        86 -------------~~~~~~~C~~~~C~-------~~f~~~~~L~~H-~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~  144 (155)
T 2rpc_A           86 -------------TGEKPFPCPFPGCG-------KIFARSENLKIH-KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV  144 (155)
T ss_dssp             -------------HCCCSEECSCTTTC-------CEESCHHHHHHH-HTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT
T ss_pred             -------------CCCCcccCCcCCCC-------CccCCHHHHHHH-HHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH
Confidence                         6899999998  87       999999999999 58999999999997  99999999999999999


Q ss_pred             -cCCCCeecc
Q 037502          156 -CGTRGHSCD  164 (426)
Q Consensus       156 -h~~kp~~C~  164 (426)
                       ++++||.|.
T Consensus       145 H~~~k~~~c~  154 (155)
T 2rpc_A          145 HTSDKSGPSS  154 (155)
T ss_dssp             TTSCCCSCSC
T ss_pred             hcCCCCCCCC
Confidence             699999984

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=4.8e-20  Score=160.69  Aligned_cols=116  Identities=27%  Similarity=0.480  Sum_probs=105.8

Q ss_pred             CCCCCCCcccccc-----cccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc--CCcccCCchhHHHHhhhccCc
Q 037502           10 IPCSSEPFSCLEN-----GISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI--CNQGFQRDQNLQMHRRRHKVP   82 (426)
Q Consensus        10 ~~~~~kpy~C~~C-----g~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~--Cgk~F~~~~~L~~H~r~H~~~   82 (426)
                      +|.++++|.|..|     ++.|.....            |..|+++|.++++|.|++  |++.|.+...|..|+++|   
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~------------l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h---   92 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYM------------LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH---   92 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHH------------HHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHT---
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHH------------HHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHc---
Confidence            7889999998753     488888775            888999999999999985  999999999999999999   


Q ss_pred             cccccccCccccCcceeCCC--CCCCCCCcccccCCHHHHHHHHHhhhCCCCcccccc--CCCcccChhhHHHHHHH-cC
Q 037502           83 WKLLKRETPVVRKRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK--CSKGYAVQSDYKAHLKT-CG  157 (426)
Q Consensus        83 ~~~~~~~~~~~~~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-h~  157 (426)
                                .++++|.|++  |+       +.|.....|..|+.++|+++++|.|.+  |++.|.....|..|+++ ||
T Consensus        93 ----------~~~~~~~C~~~~C~-------~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           93 ----------TGEKPYMCEHEGCS-------KAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             ----------TTCCCEECCSTTCC-------CEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ----------CCCCCeeCCCCCCC-------CccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence                      6889999999  77       999999999999668999999999998  99999999999999998 54

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=9.7e-18  Score=137.22  Aligned_cols=96  Identities=17%  Similarity=0.228  Sum_probs=86.5

Q ss_pred             ccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHH
Q 037502           45 SLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHF  124 (426)
Q Consensus        45 ~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~  124 (426)
                      ..++++|+++++|+|++|++.|.....|..|+++|               .++|.|.+|+       +.|.....|..|+
T Consensus         5 ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H---------------~~~~~C~~C~-------~~f~~~~~l~~H~   62 (107)
T 1wjp_A            5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC---------------RNAAVCPYCS-------LRFFSPELKQEHE   62 (107)
T ss_dssp             CCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH---------------HHSBCCTTTC-------CCBSSHHHHHHHH
T ss_pred             cccCcccCCCcCeECCCCCCccCCHHHHHHHHHHC---------------CCCccCCCCC-------CccCCHHHHHHHH
Confidence            34667889999999999999999999999999998               4689999998       9999999999995


Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHH-Hc-CCCCeecc
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLK-TC-GTRGHSCD  164 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h-~~kp~~C~  164 (426)
                       + |+++++|+|.+|++.|.....|..|++ +| ++++|.|.
T Consensus        63 -~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           63 -S-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             -H-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             -H-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence             5 999999999999999999999999998 45 88888773

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.71  E-value=3.4e-17  Score=133.40  Aligned_cols=92  Identities=24%  Similarity=0.535  Sum_probs=77.0

Q ss_pred             cCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCC
Q 037502           51 LLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSN  130 (426)
Q Consensus        51 h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~  130 (426)
                      ..++++|.|++|++.|.....|..|+++|             .++++|.|++|+       +.|.....|..| +++|.+
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H-~~~h~~   70 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTH-------------TDERPYTCDICH-------KAFRRQDHLRDH-RYIHSK   70 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHH-------------CCSCCCBCSSSC-------CBCSCHHHHHHH-GGGSCC
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHc-------------CCCCCcCCCCcc-------chhCCHHHHHHH-HHHhCC
Confidence            34567889999999999889999998888             567888888888       888888888888 578888


Q ss_pred             CCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          131 HKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       131 ~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      +++|.|.+|++.|.....|..|+++ +++++|.+
T Consensus        71 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           71 EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            8888888888888888888888888 57777753

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=3e-17  Score=131.12  Aligned_cols=89  Identities=28%  Similarity=0.538  Sum_probs=62.1

Q ss_pred             cCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCC
Q 037502           51 LLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSN  130 (426)
Q Consensus        51 h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~  130 (426)
                      +.++++|+|++|++.|.....|..|+++|             .++++|.|++|+       +.|.....|..|+ ++|.+
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H~-~~h~~   61 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCH-------------TGVKPYKCKTCD-------YAAADSSSLNKHL-RIHSD   61 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGC-------------CCCCSEECSSSC-------CEESSHHHHHHHH-HHSCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhc-------------CCCCCEeCCCCC-------CccCCHHHHHHHH-HHhCC
Confidence            45566777777777777777777777777             456677777766       7777777777773 56777


Q ss_pred             CCccccccCCCcccChhhHHHHHHH-cCCCC
Q 037502          131 HKQWVCEKCSKGYAVQSDYKAHLKT-CGTRG  160 (426)
Q Consensus       131 ~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp  160 (426)
                      +++|.|.+|++.|.....|..|+++ +++++
T Consensus        62 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           62 ERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             CCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            7777777777777777777777766 45443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=7.8e-18  Score=139.42  Aligned_cols=97  Identities=13%  Similarity=0.220  Sum_probs=81.7

Q ss_pred             hhccCccccCCCCccccccCCcccCCchhHHHHhhh--ccCccccccccCccccCcc-eeCCCCCCCCCCccccc--CCH
Q 037502           43 VVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR--HKVPWKLLKRETPVVRKRV-FVCPEPSCLHHDPCHAL--GDL  117 (426)
Q Consensus        43 ~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~--H~~~~~~~~~~~~~~~~k~-~~C~~C~c~~~~~~~~f--~~~  117 (426)
                      .|..|+++|+++++|+|++|++.|.....|..|+++  |             .++++ +.|.+|+       +.|  ...
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h-------------~~~~~~~~C~~C~-------~~f~f~~~   65 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGH-------------YRDDNHETDNNNP-------KRWSKPRK   65 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCC-------------CBCSCCCCCCCCC-------SCCSSCCC
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCc-------------cccCCCccCCCCC-------cccccccH
Confidence            378888999999999999999999999999999998  5             34444 4599988       666  788


Q ss_pred             HHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCC
Q 037502          118 VGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRG  160 (426)
Q Consensus       118 ~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp  160 (426)
                      ..|..| +++|+++++|.|++|++.|.....|..|+++ |....
T Consensus        66 ~~l~~H-~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           66 RSLLEM-EGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CCCCCC-CCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             HHHHHH-hhccCCCcceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            888899 5789999999999999999999999999888 54443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=7.9e-18  Score=137.76  Aligned_cols=98  Identities=14%  Similarity=0.162  Sum_probs=88.8

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK   84 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~   84 (426)
                      .+++.+|+++++|.|.+|++.|.....            |..|+++|  +++|+|++|++.|.....|..|++ |     
T Consensus         5 ss~~~~h~~~~~~~C~~C~~~f~~~~~------------l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H-----   64 (107)
T 1wjp_A            5 SSGASPVENKEVYQCRLCNAKLSSLLE------------QGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-K-----   64 (107)
T ss_dssp             CCCCCCCCCCCCCBCTTTCCBCSSHHH------------HHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-H-----
T ss_pred             cccCcccCCCcCeECCCCCCccCCHHH------------HHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-c-----
Confidence            567889999999999999999999886            77777777  469999999999999999999995 8     


Q ss_pred             cccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccc
Q 037502           85 LLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCE  137 (426)
Q Consensus        85 ~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~  137 (426)
                              .++++|.|.+|+       +.|.....|..|++.+|+++++|.|.
T Consensus        65 --------~~~~~~~C~~C~-------~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           65 --------CEYKKLTCLECM-------RTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             --------CSTGGGEEGGGT-------EECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             --------CCCCCccCcccc-------chhCCHHHHHHHHHHHcCCCCCCCCC
Confidence                    689999999998       99999999999965699999999885

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.68  E-value=2.9e-17  Score=133.84  Aligned_cols=95  Identities=21%  Similarity=0.401  Sum_probs=87.0

Q ss_pred             CCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccc
Q 037502            9 AIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR   88 (426)
Q Consensus         9 ~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~   88 (426)
                      .....+++|.|.+|++.|.....            |..|+++|.++++|.|++|++.|.....|..|+++|         
T Consensus        10 ~~~~~~~~~~C~~C~~~f~~~~~------------l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h---------   68 (106)
T 2ee8_A           10 LPSKTKKEFICKFCGRHFTKSYN------------LLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH---------   68 (106)
T ss_dssp             CCCCCCCCCBCSSSCCBCSSHHH------------HHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGS---------
T ss_pred             CCcCCCcCeECCCCCCccCCHHH------------HHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHh---------
Confidence            34556789999999999998886            888899999999999999999999999999999999         


Q ss_pred             cCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCcccc
Q 037502           89 ETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVC  136 (426)
Q Consensus        89 ~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C  136 (426)
                          .++++|.|.+|+       +.|.....|..| +++|.++++|.+
T Consensus        69 ----~~~~~~~C~~C~-------~~f~~~~~L~~H-~~~H~~~~~~~~  104 (106)
T 2ee8_A           69 ----SKEKPFKCQECG-------KGFCQSRTLAVH-KTLHMQTSSPTA  104 (106)
T ss_dssp             ----CCCCTTSCSSSC-------CCCSSHHHHHHH-HHHTTSCCCCCC
T ss_pred             ----CCCCCeECCCcC-------CcccCHHHHHHH-HHHhCCCCCCcC
Confidence                678999999999       999999999999 589999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.66  E-value=9.7e-17  Score=126.46  Aligned_cols=81  Identities=25%  Similarity=0.545  Sum_probs=47.7

Q ss_pred             CCccccc--cCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           54 SDRYVCE--ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        54 ~~py~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      +++|.|.  .|++.|.....|..|+++|             .++++|.|+.|+       +.|.....|..|+ ++|.++
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H~-~~h~~~   60 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIH-------------TGQKPFQCRICM-------RNFSRSDHLTTHI-RTHTGE   60 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHH-------------HCCCCEECTTTC-------CEESCHHHHHHHH-HHHHCC
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHh-------------CCCCCccCCCCC-------cccCCHHHHHHHH-HHcCCC
Confidence            4556665  4666666666666666666             345556666655       5666666666663 455555


Q ss_pred             CccccccCCCcccChhhHHHHHHH
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ++|.|.+|++.|.....|..|+++
T Consensus        61 ~~~~C~~C~~~f~~~~~l~~H~~~   84 (90)
T 1a1h_A           61 KPFACDICGRKFARSDERKRHTKI   84 (90)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHH
Confidence            666666666666666666666555

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=2.9e-16  Score=125.10  Aligned_cols=84  Identities=25%  Similarity=0.544  Sum_probs=59.0

Q ss_pred             CCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           52 LESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        52 ~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      +++++|+|++|++.|.....|..|+++|             .++++|.|++|+       +.|.....|..|+ +.|.++
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H~-~~h~~~   61 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSH-------------SGEKPYSCPVCG-------LRFKRKDRMSYHV-RSHDGS   61 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHS-------------CSSCSEECSSSC-------CEESCHHHHHHHH-HHHCCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhc-------------CCCCCCcCCCCC-------CccCCHHHHHHHH-HHhcCC
Confidence            3556777777777777777777777777             456677777766       7777777777773 566665


Q ss_pred             --CccccccCCCcccChhhHHHHHHH-c
Q 037502          132 --KQWVCEKCSKGYAVQSDYKAHLKT-C  156 (426)
Q Consensus       132 --k~~~C~~C~k~f~~~~~L~~H~~~-h  156 (426)
                        ++|.|.+|++.|.....|..|++. |
T Consensus        62 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H   89 (95)
T 2yt9_A           62 VGKPYICQSCGKGFSRPDHLNGHIKQVH   89 (95)
T ss_dssp             CCSSBCCSSSCCCBSSHHHHHHHHHHTS
T ss_pred             CCCceECCCccchhCCHHHHHHHHHHhc
Confidence              677777777777777777777654 5

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=2.5e-16  Score=125.76  Aligned_cols=87  Identities=18%  Similarity=0.288  Sum_probs=81.9

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccC
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFS  170 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~  170 (426)
                      .++++|.|.+|+       +.|.....|..| ++.|.++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.
T Consensus         4 ~~~~~~~C~~C~-------~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   75 (96)
T 2dmd_A            4 GSSGPHKCEVCG-------KCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASR   75 (96)
T ss_dssp             CCCCCCCBTTTT-------BCCCCHHHHHHH-GGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEES
T ss_pred             CCCcCeECCCCC-------CccCCHHHHHHH-HHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccC
Confidence            578999999999       999999999999 5899999999999999999999999999999 699999996 999999


Q ss_pred             ChhhHHHHHHHhcCCCC
Q 037502          171 RVESFIEHQDACSKGHI  187 (426)
Q Consensus       171 ~~~~L~~H~r~h~~~~~  187 (426)
                      ....|..|+++|+++..
T Consensus        76 ~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           76 NSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             SHHHHHHHHTTCCSCCC
T ss_pred             CHHHHHHHHHHhcCCCC
Confidence            99999999999987754

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.3e-16  Score=130.92  Aligned_cols=84  Identities=18%  Similarity=0.388  Sum_probs=44.9

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhC
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHS  129 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~  129 (426)
                      .|+++++|+| .|++.|.....|..|+++|             .++++|.|++|+       +.|.....|..| +++|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H-~~~h~   61 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMH-------------LGLRPYGCGVCG-------KKFKMKHHLVGH-MKIHT   61 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHH-------------SCCCSEECTTTS-------CEESSSHHHHHH-HTTTC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHc-------------CCCcCccCCCCC-------cccCCHHHHHHH-HHHcC
Confidence            3555556666 5666666666666666555             344555555554       555555555555 24455


Q ss_pred             CCCccccccCCCcccChhhHHHHHHH
Q 037502          130 NHKQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       130 ~~k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ++++|.|.+|++.|.....|..|+++
T Consensus        62 ~~~~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A           62 GIKPYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCeeCCCCcchhcCHHHHHHHHHH
Confidence            55555555555555555555444444

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.64  E-value=3e-16  Score=123.65  Aligned_cols=85  Identities=24%  Similarity=0.594  Sum_probs=76.9

Q ss_pred             cCcceeCC--CCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCccc
Q 037502           94 RKRVFVCP--EPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVF  169 (426)
Q Consensus        94 ~~k~~~C~--~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F  169 (426)
                      |+++|.|+  .|+       +.|.....|..| +++|.++++|.|..|++.|.....|..|+++ +++++|.|. |++.|
T Consensus         1 ~~k~~~C~~~~C~-------~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   72 (90)
T 1a1h_A            1 MERPYACPVESCD-------RRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF   72 (90)
T ss_dssp             --CCEECCSSSCC-------CEESSHHHHHHH-HHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             CCCceECCCCCCC-------CccCCHHHHHHH-HHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchh
Confidence            46899998  477       999999999999 5789999999999999999999999999999 699999996 99999


Q ss_pred             CChhhHHHHHHHhcCCC
Q 037502          170 SRVESFIEHQDACSKGH  186 (426)
Q Consensus       170 ~~~~~L~~H~r~h~~~~  186 (426)
                      ...+.|..|+++|+++.
T Consensus        73 ~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           73 ARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             SSHHHHHHHHGGGGC--
T ss_pred             CCHHHHHHHHHHhcccC
Confidence            99999999999998764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.64  E-value=1.9e-16  Score=122.37  Aligned_cols=79  Identities=25%  Similarity=0.528  Sum_probs=50.0

Q ss_pred             ccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWV  135 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~  135 (426)
                      ||+|++|++.|.....|..|+++|             .++++|.|+.|+       +.|.....|..| ++.|.++++|.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H-~~~h~~~~~~~   59 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIH-------------SDTRPYPCQYCG-------KRFHQKSDMKKH-TFIHTGEKPHK   59 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH-------------HTCCCEECSSSC-------CEESSHHHHHHH-HHHHHTCCCEE
T ss_pred             CccCCCCcccccCchhHHHHHHHc-------------CCCCCeeCCcCC-------hhhCCHHHHHHH-HHHhcCCCCCc
Confidence            466666666666666666666666             455666666665       666666666666 35566666666


Q ss_pred             cccCCCcccChhhHHHHHHH
Q 037502          136 CEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       136 C~~C~k~f~~~~~L~~H~~~  155 (426)
                      |.+|++.|.....|..|+++
T Consensus        60 C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A           60 CQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CTTTSCEESSHHHHHHHHHH
T ss_pred             CCCcchhhCChHHHHHHHHh
Confidence            66666666666666666655

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.1e-16  Score=127.61  Aligned_cols=90  Identities=17%  Similarity=0.361  Sum_probs=81.8

Q ss_pred             CCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccC
Q 037502           11 PCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRET   90 (426)
Q Consensus        11 ~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~   90 (426)
                      ++++++|.|.+|++.|.....            |..|+++|.++++|+|++|++.|.....|..|+++|+          
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~------------l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------   59 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYH------------LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHD----------   59 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHH------------HHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHC----------
T ss_pred             CCCCCCeECCCCCCccCChHH------------HHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhc----------
Confidence            467899999999999998886            8888999999999999999999999999999999994          


Q ss_pred             ccccC--cceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCC
Q 037502           91 PVVRK--RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK  132 (426)
Q Consensus        91 ~~~~~--k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k  132 (426)
                         ++  ++|.|++|+       +.|.....|..|+++.|.++.
T Consensus        60 ---~~~~~~~~C~~C~-------~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           60 ---GSVGKPYICQSCG-------KGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             ---CCCCSSBCCSSSC-------CCBSSHHHHHHHHHHTSCCCS
T ss_pred             ---CCCCCceECCCcc-------chhCCHHHHHHHHHHhcCCCC
Confidence               44  899999999       999999999999777898753

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.64  E-value=4.2e-16  Score=120.42  Aligned_cols=80  Identities=26%  Similarity=0.567  Sum_probs=75.3

Q ss_pred             ceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhh
Q 037502           97 VFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVES  174 (426)
Q Consensus        97 ~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~  174 (426)
                      +|.|++|+       +.|.....|..|+ +.|.++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|...+.
T Consensus         1 ~~~C~~C~-------~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   72 (82)
T 2kmk_A            1 SFDCKICG-------KSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSN   72 (82)
T ss_dssp             CEECSSSC-------CEESSHHHHHHHH-HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHH
T ss_pred             CccCCCCc-------ccccCchhHHHHH-HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHH
Confidence            58999998       9999999999995 789999999999999999999999999999 699999997 9999999999


Q ss_pred             HHHHHHHhcC
Q 037502          175 FIEHQDACSK  184 (426)
Q Consensus       175 L~~H~r~h~~  184 (426)
                      |..|+++|+|
T Consensus        73 l~~H~~~H~g   82 (82)
T 2kmk_A           73 LITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHC-
T ss_pred             HHHHHHhhCC
Confidence            9999999864

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=9.2e-17  Score=132.90  Aligned_cols=102  Identities=12%  Similarity=0.162  Sum_probs=86.9

Q ss_pred             CCCCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccc--cCCCCcc-ccccCCccc--CCchhHHHHhh
Q 037502            3 ANNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKT--LLESDRY-VCEICNQGF--QRDQNLQMHRR   77 (426)
Q Consensus         3 ~~~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~--h~~~~py-~C~~Cgk~F--~~~~~L~~H~r   77 (426)
                      .+..|+++|++++||.|.+||+.|.....            |..|+++  |.++++| +|++|++.|  .....|..|++
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~   73 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVE------------LTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG   73 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHH------------HHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCC
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHH------------HHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhh
Confidence            46889999999999999999999999887            6667666  6777765 499999999  99999999999


Q ss_pred             hccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccc
Q 037502           78 RHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCE  137 (426)
Q Consensus        78 ~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~  137 (426)
                      +|             .++++|.|++|+       +.|.....|..|+ +.|.......++
T Consensus        74 ~H-------------~~~~~~~C~~C~-------k~f~~~~~L~~H~-~~hh~~~~~~~~  112 (115)
T 2dmi_A           74 KE-------------DAQKVLKCMYCG-------HSFESLQDLSVHM-IKTKHYQKVSGP  112 (115)
T ss_dssp             SC-------------CCCSSCBCSSSC-------CBCSSHHHHHHHH-HHTTTTTCSCCC
T ss_pred             cc-------------CCCcceECCCCC-------CccCCHHHHHHHH-HHhCCcccCCCC
Confidence            99             789999999999       9999999999996 555555444443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.9e-15  Score=123.86  Aligned_cols=84  Identities=20%  Similarity=0.522  Sum_probs=79.2

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccC
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFS  170 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~  170 (426)
                      +++++|.| .|+       +.|.....|..| ++.|.++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.
T Consensus         6 ~~~k~~~C-~C~-------~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   76 (110)
T 2csh_A            6 SGDKLYPC-QCG-------KSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM   76 (110)
T ss_dssp             CCCCCEEC-TTS-------CEESSHHHHHHH-HHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEES
T ss_pred             CCCCCEec-cCC-------CccCCHHHHHHH-HHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhc
Confidence            78999999 888       999999999999 4789999999999999999999999999999 699999997 999999


Q ss_pred             ChhhHHHHHHHhcCC
Q 037502          171 RVESFIEHQDACSKG  185 (426)
Q Consensus       171 ~~~~L~~H~r~h~~~  185 (426)
                      ....|..|+++|+..
T Consensus        77 ~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           77 WRDSFHRHVTSCTKS   91 (110)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcccc
Confidence            999999999998654

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.56  E-value=3.8e-15  Score=116.95  Aligned_cols=81  Identities=21%  Similarity=0.607  Sum_probs=57.6

Q ss_pred             Ccccccc--CCcccCCchhHHHHhhhccCccccccccCccccCcceeCC--CCCCCCCCcccccCCHHHHHHHHHhhhCC
Q 037502           55 DRYVCEI--CNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP--EPSCLHHDPCHALGDLVGIKKHFRRKHSN  130 (426)
Q Consensus        55 ~py~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~--~C~c~~~~~~~~f~~~~~l~~H~~r~H~~  130 (426)
                      ++|.|+.  ||+.|.....|..|+++|             .++++|.|+  .|+       +.|.....|..|+ +.|.+
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~~~C~-------~~f~~~~~l~~H~-~~h~~   62 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTH-------------TGEKPYHCDWDGCG-------WKFARSDELTRHY-RKHTG   62 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTS-------------CSSCCEECCSTTTC-------CEESSHHHHHHHH-HHHHC
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhc-------------CCCCCcCCCCCCCC-------CccCCHHHHHHHH-HHcCC
Confidence            4677777  777777777777777777             466777776  365       7777777777773 66777


Q ss_pred             CCccccccCCCcccChhhHHHHHHHc
Q 037502          131 HKQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       131 ~k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      +++|.|.+|++.|.....|..|+++|
T Consensus        63 ~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           63 HRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHhh
Confidence            77777777777777777777776653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.56  E-value=7.8e-15  Score=117.73  Aligned_cols=80  Identities=20%  Similarity=0.532  Sum_probs=45.9

Q ss_pred             Ccccccc--CCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC--CCCCCCCcccccCCHHHHHHHHHhhhCC
Q 037502           55 DRYVCEI--CNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRRKHSN  130 (426)
Q Consensus        55 ~py~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H~~r~H~~  130 (426)
                      ++|.|+.  |++.|.....|..|+++|             .++++|.|++  |+       +.|.....|..|+ ++|.+
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~~~C~-------~~f~~~~~l~~H~-~~h~~   72 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTH-------------TGEKPYKCTWEGCD-------WRFARSDELTRHY-RKHTG   72 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHH-------------SCCCCEECCSSSCC-------CEESSHHHHHHHH-HHHTS
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHh-------------CCCCCeeCCCCCCC-------CccCCHHHHHHHH-HHhCC
Confidence            4566654  666666666666666665             3455566642  44       5555555566662 45555


Q ss_pred             CCccccccCCCcccChhhHHHHHHH
Q 037502          131 HKQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       131 ~k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      +++|.|.+|++.|.....|..|+++
T Consensus        73 ~~~~~C~~C~~~f~~~~~l~~H~~~   97 (100)
T 2ebt_A           73 AKPFQCGVCNRSFSRSDHLALHMKR   97 (100)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             CCCeECCCCcCccCCHHHHHHHHHH
Confidence            5556665555555555555555555

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.55  E-value=3.9e-15  Score=109.11  Aligned_cols=55  Identities=25%  Similarity=0.548  Sum_probs=36.2

Q ss_pred             CCccccccCCCcccChhhHHHHHHHc-CCCCeecc-CCcccCChhhHHHHHHHhcCC
Q 037502          131 HKQWVCEKCSKGYAVQSDYKAHLKTC-GTRGHSCD-CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       131 ~k~~~C~~C~k~f~~~~~L~~H~~~h-~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      ||||+|++||+.|...+.|..|+++| |++||.|+ ||++|...+.|..|+++|+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            56666666666666666666666663 66666664 666666666666666666554

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.54  E-value=3.9e-15  Score=109.12  Aligned_cols=58  Identities=26%  Similarity=0.587  Sum_probs=42.6

Q ss_pred             CCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCC
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK  132 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k  132 (426)
                      |+||+|++||+.|...++|..|+++|             +|+++|.|++||       +.|.....|..| +++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~H-------------t~ekp~~C~~C~-------k~F~~~~~L~~H-~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAH-------------LGYRPRSCPECG-------KCFRDQSEVNRH-LKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHH-------------HTCCCEECTTTC-------CEESSHHHHHHH-GGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHh-------------CCCcCeECCCCC-------CCcCCHHHHHHH-hCccCCCC
Confidence            56777777777777777777777777             677777777777       777777777777 46777654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.54  E-value=2.1e-14  Score=115.16  Aligned_cols=84  Identities=23%  Similarity=0.528  Sum_probs=77.6

Q ss_pred             ccCcceeCCC--CCCCCCCcccccCCHHHHHHHHHhhhCCCCccccc--cCCCcccChhhHHHHHHH-cCCCCeecc-CC
Q 037502           93 VRKRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCE--KCSKGYAVQSDYKAHLKT-CGTRGHSCD-CG  166 (426)
Q Consensus        93 ~~~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cg  166 (426)
                      ...++|.|.+  |+       +.|.....|..|+ +.|.++++|.|.  .|++.|.....|..|+++ +++++|.|. |+
T Consensus        11 ~~~~~~~C~~~~C~-------~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   82 (100)
T 2ebt_A           11 EKRRIHYCDYPGCT-------KVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN   82 (100)
T ss_dssp             CSCCCEECCSSSCC-------CEESCHHHHHHHH-HHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSC
T ss_pred             ccCcceEcCCCCCC-------CcccCHHHHHHHH-HHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCc
Confidence            5678999997  77       9999999999995 789999999996  699999999999999999 699999996 99


Q ss_pred             cccCChhhHHHHHHHhcC
Q 037502          167 RVFSRVESFIEHQDACSK  184 (426)
Q Consensus       167 k~F~~~~~L~~H~r~h~~  184 (426)
                      +.|.....|..|+++|.+
T Consensus        83 ~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           83 RSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CBCSSHHHHHHHHHHHCC
T ss_pred             CccCCHHHHHHHHHHhCC
Confidence            999999999999999864

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.3e-14  Score=113.17  Aligned_cols=83  Identities=20%  Similarity=0.325  Sum_probs=69.2

Q ss_pred             hccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHH
Q 037502           44 VSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKH  123 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H  123 (426)
                      +..|+++|+++++|+|++|++.|.....|..|+++|+..         ...+++|.|.+|+       +.|.....|..|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~---------~~~~~~~~C~~C~-------~~f~~~~~L~~H   66 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP---------NFVPAAFVCSKCG-------KTFTRRNTMARH   66 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS---------SCCCCCEECSSSC-------CEESCHHHHHHH
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCC---------cCCCcceECCCCC-------ChhCCHHHHHHH
Confidence            677889999999999999999999999999999887510         0012789999988       889999999999


Q ss_pred             HHhhhCCCCccccccCCCcc
Q 037502          124 FRRKHSNHKQWVCEKCSKGY  143 (426)
Q Consensus       124 ~~r~H~~~k~~~C~~C~k~f  143 (426)
                       +++|.+++++.|..|+..|
T Consensus        67 -~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           67 -ADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             -HHHCCCCCSCCCCCCCCCC
T ss_pred             -HHHccCCCCcccCCCCCCC
Confidence             5788888999999888765

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.53  E-value=1.4e-15  Score=119.71  Aligned_cols=80  Identities=18%  Similarity=0.301  Sum_probs=57.7

Q ss_pred             CCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQ  133 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~  133 (426)
                      ++||.|++||+.|.....|..|+++|             .++++|.|++|+       +.|.....|..|+ +.|.+ ++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C~-------k~f~~~~~L~~H~-~~h~~-~~   58 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTH-------------TGEKPFACDICG-------RKFARSDERKRHR-DIQHI-LP   58 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHH-------------HCCCCEECTTTC-------CEESSHHHHHHHH-HHHTH-HH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHc-------------CCCCCccCCCCC-------CccCCHHHHHHHH-HHhCC-Cc
Confidence            35777777777777777777777777             566777777776       7777777777774 44443 66


Q ss_pred             cccccCCCcccChhhHHHHHHH
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      |.|..|++.|.....|..|++.
T Consensus        59 ~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C           59 ILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhhhHHHHHH
Confidence            7777777777777777777766

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.52  E-value=2e-15  Score=127.55  Aligned_cols=122  Identities=16%  Similarity=0.249  Sum_probs=87.4

Q ss_pred             cccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhh
Q 037502           49 KTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKH  128 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H  128 (426)
                      .++.+.++|.|..++...  ...+..|.+.+...          ...+.+.|++|+.... ....|.....|..|+  .|
T Consensus         5 ~~~~~~k~~~~~~k~~~~--~~s~ee~~~~~~l~----------~~~~~~~c~~~~~~~~-~~~~~~~~~~l~~h~--~h   69 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFI--HVTLEELKRYHQLT----------PEQKRLIRAIVKTLIH-NPQLLDESSYLYRLL--AS   69 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEE--ECCHHHHHHHTTSC----------HHHHHHHHHHHHHHHH-CGGGTTTHHHHHHHH--HH
T ss_pred             hhcccccccccccCCeee--eecHHhhhccccCC----------hhhCcccchhhhcccC-CCcccCCHHHHHHHH--Hh
Confidence            456788888887655332  33445554444210          3456677777640000 003445677777774  58


Q ss_pred             CCCCccccccCCCcccChhhHHHHHHHcCCCCeecc-CCcccCChhhHHHHHHHhcCCC
Q 037502          129 SNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCD-CGRVFSRVESFIEHQDACSKGH  186 (426)
Q Consensus       129 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~~  186 (426)
                      ++++||.|++||+.|.....|..|+++| ++||.|+ |++.|...+.|..|+++|++..
T Consensus        70 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           70 KAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             CCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            8899999999999999999999999999 9999996 9999999999999999998764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.51  E-value=2.7e-14  Score=112.02  Aligned_cols=80  Identities=24%  Similarity=0.506  Sum_probs=74.9

Q ss_pred             CcceeCCC--CCCCCCCcccccCCHHHHHHHHHhhhCCCCccccc--cCCCcccChhhHHHHHHH-cCCCCeecc-CCcc
Q 037502           95 KRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCE--KCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRV  168 (426)
Q Consensus        95 ~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~  168 (426)
                      .++|.|.+  |+       +.|.....|..| ++.|.++++|.|.  .|++.|.....|..|+++ +++++|.|. |++.
T Consensus         3 ~~~~~C~~~~C~-------~~f~~~~~l~~H-~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (89)
T 2wbs_A            3 TATHTCDYAGCG-------KTYTKSSHLKAH-LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA   74 (89)
T ss_dssp             CCCEECCSTTTC-------CEESSHHHHHHH-HTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred             CCCeeCCCCCCC-------CcCCCHHHHHHH-HHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc
Confidence            56899999  77       999999999999 5789999999997  599999999999999999 699999996 9999


Q ss_pred             cCChhhHHHHHHHh
Q 037502          169 FSRVESFIEHQDAC  182 (426)
Q Consensus       169 F~~~~~L~~H~r~h  182 (426)
                      |...+.|..|+++|
T Consensus        75 f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           75 FSRSDHLALHMKRH   88 (89)
T ss_dssp             ESSHHHHHHHGGGG
T ss_pred             cCCHHHHHHHHHhh
Confidence            99999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.50  E-value=2.4e-15  Score=118.42  Aligned_cols=82  Identities=17%  Similarity=0.254  Sum_probs=75.7

Q ss_pred             CcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHHcCCCCeecc-CCcccCChh
Q 037502           95 KRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCD-CGRVFSRVE  173 (426)
Q Consensus        95 ~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~kp~~C~-Cgk~F~~~~  173 (426)
                      +++|.|++|+       +.|.....|..| +++|.++++|.|.+|++.|.....|..|+++|...+|.|+ |++.|....
T Consensus         1 ek~~~C~~C~-------k~f~~~~~L~~H-~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~   72 (88)
T 1llm_C            1 MKPFQCRICM-------RNFSRSDHLTTH-IRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNY   72 (88)
T ss_dssp             CCCEECTTTC-------CEESCHHHHHHH-HHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCC-------CccCCHHHHHHH-HHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHh
Confidence            4789999999       999999999999 4789999999999999999999999999999556899996 999999999


Q ss_pred             hHHHHHHHhcC
Q 037502          174 SFIEHQDACSK  184 (426)
Q Consensus       174 ~L~~H~r~h~~  184 (426)
                      .|..|++.+++
T Consensus        73 ~L~~H~~~~h~   83 (88)
T 1llm_C           73 HLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhHHHHHHHHH
Confidence            99999987643

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=3.7e-14  Score=108.85  Aligned_cols=71  Identities=25%  Similarity=0.590  Sum_probs=50.6

Q ss_pred             CCCCcccccc--CCcccCCchhHHHHhh-hccCccccccccCccccCcceeCCC--CCCCCCCcccccCCHHHHHHHHHh
Q 037502           52 LESDRYVCEI--CNQGFQRDQNLQMHRR-RHKVPWKLLKRETPVVRKRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRR  126 (426)
Q Consensus        52 ~~~~py~C~~--Cgk~F~~~~~L~~H~r-~H~~~~~~~~~~~~~~~~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H~~r  126 (426)
                      +++++|.|+.  |++.|.+...|..|++ .|             .++++|.|++  |+       +.|.....|..|+ +
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H-------------~~~~~~~C~~~~C~-------k~f~~~~~L~~H~-~   61 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH-------------IHQKSFSCPEPACG-------KSFNFKKHLKEHM-K   61 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGG-------------GSCCCEECSCTTTC-------CEESSHHHHHHHH-H
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHh-------------CCCCCeECCCCCCc-------CccCCHHHHHHHH-H
Confidence            3556777765  7777777777777777 56             5667777777  66       7777777777773 5


Q ss_pred             hhCCCCccccccCCCcc
Q 037502          127 KHSNHKQWVCEKCSKGY  143 (426)
Q Consensus       127 ~H~~~k~~~C~~C~k~f  143 (426)
                      +|+++++|.|.+|++.|
T Consensus        62 ~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           62 LHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             HHHTSCCCSCCSSSCCC
T ss_pred             HhCCCCCeeCCCCCCCC
Confidence            67777777777777776

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.45  E-value=9.9e-14  Score=107.56  Aligned_cols=76  Identities=26%  Similarity=0.556  Sum_probs=55.7

Q ss_pred             cccc--ccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC--CCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           56 RYVC--EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        56 py~C--~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      ||+|  +.||+.|.....|..|+++|             .++++|.|++  |+       +.|.....|..|+ ++|++ 
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~~~C~-------~~f~~~~~l~~H~-~~h~~-   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSH-------------TQQLPYECPHEGCD-------KRFSLPSRLKRHE-KVHAG-   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH-------------HTTCCEECCSTTCC-------CEESSHHHHHHHH-HHHHS-
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHh-------------CCCCCeeCCCCCCc-------CccCCHHHHHHHH-HHhCC-
Confidence            5777  77777777777777777777             5667777776  66       7777777777774 56666 


Q ss_pred             Ccccccc---CCCcccChhhHHHHHHH
Q 037502          132 KQWVCEK---CSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       132 k~~~C~~---C~k~f~~~~~L~~H~~~  155 (426)
                        |.|..   |++.|.....|..|+++
T Consensus        59 --~~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A           59 --YPCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             --EECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             --CCCCCCCCCCCccCCHHHHHHHHHh
Confidence              77777   77777777777777766

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.5e-13  Score=105.34  Aligned_cols=71  Identities=20%  Similarity=0.404  Sum_probs=65.4

Q ss_pred             ccCcceeCCC--CCCCCCCcccccCCHHHHHHHHHhhhCCCCcccccc--CCCcccChhhHHHHHHH-cCCCCeecc-CC
Q 037502           93 VRKRVFVCPE--PSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK--CSKGYAVQSDYKAHLKT-CGTRGHSCD-CG  166 (426)
Q Consensus        93 ~~~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cg  166 (426)
                      +++++|.|..  |+       +.|.....|..|++..|.++++|.|.+  |++.|.....|..|+++ +++++|.|+ |+
T Consensus         3 ~~~~~~~C~~~~C~-------~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~   75 (79)
T 2dlk_A            3 SGSSGMPCDFPGCG-------RIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSG   75 (79)
T ss_dssp             SCCSSEECSSTTTC-------CEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSS
T ss_pred             CCCCCccCCCCCCc-------CccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCC
Confidence            6789999998  77       999999999999644899999999999  99999999999999999 699999996 99


Q ss_pred             cccC
Q 037502          167 RVFS  170 (426)
Q Consensus       167 k~F~  170 (426)
                      +.|.
T Consensus        76 k~F~   79 (79)
T 2dlk_A           76 PSSG   79 (79)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9994

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.3e-13  Score=105.61  Aligned_cols=69  Identities=26%  Similarity=0.439  Sum_probs=58.4

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHh
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRR  126 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r  126 (426)
                      +...+.++++|+|++|++.|.....|..|+++|             .++++|.|++|+       +.|.....|..| ++
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~L~~H-~~   67 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH-------------TGEKPYKCDECG-------KAFIQRSHLIGH-HR   67 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTT-------------CCSCSEECSSSC-------CEESSHHHHHHH-GG
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHc-------------CCCcCeeCCCCC-------CccCCHHHHHHH-HH
Confidence            345567788899999999999999999999988             678889999888       888888889998 57


Q ss_pred             hhCCCCcccc
Q 037502          127 KHSNHKQWVC  136 (426)
Q Consensus       127 ~H~~~k~~~C  136 (426)
                      +|++++||+|
T Consensus        68 ~H~~~~p~~C   77 (77)
T 2cot_A           68 VHTGSGPSSG   77 (77)
T ss_dssp             GSCCCCCCCC
T ss_pred             HhCCCCCCCC
Confidence            8888888887

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=9e-14  Score=108.26  Aligned_cols=79  Identities=20%  Similarity=0.441  Sum_probs=65.9

Q ss_pred             hHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC---CccccccCCCcccChh
Q 037502           71 NLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH---KQWVCEKCSKGYAVQS  147 (426)
Q Consensus        71 ~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~---k~~~C~~C~k~f~~~~  147 (426)
                      +|..|+++|             .++++|.|.+|+       +.|.....|..|++..|...   ++|.|.+|++.|....
T Consensus         2 s~~~H~~~H-------------~~~k~~~C~~C~-------~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~   61 (86)
T 1x6h_A            2 SSGSSGRTH-------------TGEKPYACSHCD-------KTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN   61 (86)
T ss_dssp             TTTCCSTTC-------------CCCCCEECSSSS-------CEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHH
T ss_pred             Cccccccee-------------cCCCCCcCCCCC-------CccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHH
Confidence            456788888             678999999988       99999999999964444443   7899999999999999


Q ss_pred             hHHHHHHH-cCCCCeecc-CCccc
Q 037502          148 DYKAHLKT-CGTRGHSCD-CGRVF  169 (426)
Q Consensus       148 ~L~~H~~~-h~~kp~~C~-Cgk~F  169 (426)
                      .|..|+++ ++++++.|. |+..|
T Consensus        62 ~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           62 TMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             HHHHHHHHccCCCCcccCCCCCCC
Confidence            99999999 688999996 88776

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=5.1e-14  Score=107.88  Aligned_cols=70  Identities=20%  Similarity=0.285  Sum_probs=63.3

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCcccc
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKL   85 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~   85 (426)
                      .+...+.+++||.|.+|++.|.....            |..|+++|.++++|+|++|++.|.....|..|+++|      
T Consensus         8 ~~~~~~~~~~~~~C~~C~~~f~~~~~------------l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H------   69 (77)
T 2cot_A            8 RSEWQQRERRRYKCDECGKSFSHSSD------------LSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH------   69 (77)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHH------------HHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGS------
T ss_pred             CCcCcCCCCCCEECCCCCcccCCHHH------------HHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHh------
Confidence            34456778899999999999998886            888889999999999999999999999999999999      


Q ss_pred             ccccCccccCcceeC
Q 037502           86 LKRETPVVRKRVFVC  100 (426)
Q Consensus        86 ~~~~~~~~~~k~~~C  100 (426)
                             .++++|+|
T Consensus        70 -------~~~~p~~C   77 (77)
T 2cot_A           70 -------TGSGPSSG   77 (77)
T ss_dssp             -------CCCCCCCC
T ss_pred             -------CCCCCCCC
Confidence                   68899987

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.42  E-value=3.1e-14  Score=120.06  Aligned_cols=115  Identities=18%  Similarity=0.236  Sum_probs=86.7

Q ss_pred             CCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccC------CchhHHHHhhhccCc
Q 037502            9 AIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQ------RDQNLQMHRRRHKVP   82 (426)
Q Consensus         9 ~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~------~~~~L~~H~r~H~~~   82 (426)
                      .++++.|+|.|..++........          +++..+. .....+.|.|++|++.|.      ....|..|+ .|   
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~s~e----------e~~~~~~-l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h---   69 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHVTLE----------ELKRYHQ-LTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-AS---   69 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEECCHH----------HHHHHTT-SCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HH---
T ss_pred             hhcccccccccccCCeeeeecHH----------hhhcccc-CChhhCcccchhhhcccCCCcccCCHHHHHHHH-Hh---
Confidence            46889999999776643321110          0111121 223346788999887776      556677776 57   


Q ss_pred             cccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cCC
Q 037502           83 WKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGT  158 (426)
Q Consensus        83 ~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~  158 (426)
                                .++++|.|++|+       +.|.....|..|+ ++|  +++|.|++|++.|.....|..|+++ ||.
T Consensus        70 ----------~~~~~~~C~~C~-------k~f~~~~~l~~H~-~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           70 ----------KAISQFVCPLCL-------MPFSSSVSLKQHI-RYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             ----------HHHCSEECTTTC-------CEESSHHHHHHHH-HHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             ----------CCCCCeECCCCC-------cccCCHhHHHHHH-HHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence                      579999999999       9999999999994 788  8999999999999999999999999 554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=4e-13  Score=105.47  Aligned_cols=66  Identities=17%  Similarity=0.325  Sum_probs=58.3

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHh
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRR  126 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r  126 (426)
                      .+..+...++|+|++||+.|.+..+|..|+++|             .++++|.|.+|+       +.|.....|..|+++
T Consensus        19 ~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H-------------~~~k~~~C~~C~-------k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           19 VLGLSASAECHLCPVCGESFASKGAQERHLRLL-------------HAAQVFPCKYCP-------ATFYSSPGLTRHINK   78 (85)
T ss_dssp             CCSSCCCCTTEECTTSCCEESSHHHHHHHHHTT-------------SCSSSEECTTSS-------CEESSHHHHHHHHHT
T ss_pred             CCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhc-------------cCCCccCCCCCC-------CEeCCHHHHHHhCcc
Confidence            356677888999999999999999999999999             678999999988       999999999999878


Q ss_pred             hhCCCC
Q 037502          127 KHSNHK  132 (426)
Q Consensus       127 ~H~~~k  132 (426)
                      +|++++
T Consensus        79 ~H~~E~   84 (85)
T 2lv2_A           79 CHPSEN   84 (85)
T ss_dssp             TCTTCC
T ss_pred             cCcCCC
Confidence            898775

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=9.4e-14  Score=111.84  Aligned_cols=76  Identities=16%  Similarity=0.207  Sum_probs=67.4

Q ss_pred             cccCCHHHHHHHHHhhhCCCCccccccCCCccc-ChhhHHHHHHH-cC-CCCeecc-CCcccCChhhHHHHHHHhcCCCC
Q 037502          112 HALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYA-VQSDYKAHLKT-CG-TRGHSCD-CGRVFSRVESFIEHQDACSKGHI  187 (426)
Q Consensus       112 ~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~-~~~~L~~H~~~-h~-~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~~~  187 (426)
                      ..+.....+..| +++|+++++|.|.+|++.|. ....|..|+++ ++ +++|.|+ |++.|.+...|.+|+++|+++.+
T Consensus         4 ~s~~~~~~~~~h-~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            4 GSSGPGGPEEQW-QRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCCCSCSHH-HHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCCCcHHHH-HHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            445555666788 68999999999999999999 99999999999 57 8999997 99999999999999999998875


Q ss_pred             C
Q 037502          188 R  188 (426)
Q Consensus       188 ~  188 (426)
                      .
T Consensus        83 ~   83 (98)
T 2gqj_A           83 S   83 (98)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.40  E-value=4.8e-13  Score=103.60  Aligned_cols=76  Identities=25%  Similarity=0.541  Sum_probs=70.5

Q ss_pred             ceeC--CCCCCCCCCcccccCCHHHHHHHHHhhhCCCCcccccc--CCCcccChhhHHHHHHHc-CCCCeec-c---CCc
Q 037502           97 VFVC--PEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK--CSKGYAVQSDYKAHLKTC-GTRGHSC-D---CGR  167 (426)
Q Consensus        97 ~~~C--~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h-~~kp~~C-~---Cgk  167 (426)
                      ||.|  +.|+       +.|.....|..| +++|.++++|.|.+  |++.|.....|..|+++| +   |.| .   |++
T Consensus         1 p~~C~~~~C~-------~~f~~~~~l~~H-~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~   69 (85)
T 2j7j_A            1 MYVCHFENCG-------KAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSF   69 (85)
T ss_dssp             CEECCSTTCC-------CEESSHHHHHHH-HHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCC
T ss_pred             CccCCCCCCC-------cccCCHHHHHHH-HHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCC
Confidence            6899  7888       999999999999 58899999999988  999999999999999994 6   999 5   999


Q ss_pred             ccCChhhHHHHHHHhc
Q 037502          168 VFSRVESFIEHQDACS  183 (426)
Q Consensus       168 ~F~~~~~L~~H~r~h~  183 (426)
                      .|.....|..|+++|+
T Consensus        70 ~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           70 VGKTWTLYLKHVAECH   85 (85)
T ss_dssp             EESSHHHHHHHHHHCC
T ss_pred             ccCCHHHHHHHHHhcC
Confidence            9999999999999874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.9e-13  Score=111.12  Aligned_cols=73  Identities=15%  Similarity=0.218  Sum_probs=50.2

Q ss_pred             cCCCCccccccCCcccCCchhHHHHhhh-ccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhC
Q 037502           51 LLESDRYVCEICNQGFQRDQNLQMHRRR-HKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHS  129 (426)
Q Consensus        51 h~~~~py~C~~Cgk~F~~~~~L~~H~r~-H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~  129 (426)
                      -+|++||+|+.||+.|.....|..|+++ |.+.          .++++|.|.+||       +.|.....|..|++++|+
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~----------~~ekpf~C~~Cg-------k~F~~~~~L~~H~~r~Ht   75 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV----------VLNSSYVCVECN-------FLTKRYDALSEHNLKYHP   75 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC----------CCSCCEEETTTT-------EEESSTHHHHTHHHHTST
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC----------CCCCCcCCCCCC-------cccCCHHHHHHHHHHhcC
Confidence            4567778888888888777778777763 6210          236677777776       777777777777446777


Q ss_pred             CCCccccccCC
Q 037502          130 NHKQWVCEKCS  140 (426)
Q Consensus       130 ~~k~~~C~~C~  140 (426)
                      |++||.|.++.
T Consensus        76 gekpy~C~~~~   86 (102)
T 2ghf_A           76 GEENFKLTMVK   86 (102)
T ss_dssp             TCCCEEEEECC
T ss_pred             CCCCeeCCccc
Confidence            77777776643

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=5.3e-13  Score=107.26  Aligned_cols=74  Identities=12%  Similarity=0.211  Sum_probs=66.7

Q ss_pred             cccCCHHHHHHHHHhhhCCCCccccccCCCcc-cChhhHHHHHHHcCCCCeecc-CCcccCChhhHHHH-HHHhcCCC
Q 037502          112 HALGDLVGIKKHFRRKHSNHKQWVCEKCSKGY-AVQSDYKAHLKTCGTRGHSCD-CGRVFSRVESFIEH-QDACSKGH  186 (426)
Q Consensus       112 ~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f-~~~~~L~~H~~~h~~kp~~C~-Cgk~F~~~~~L~~H-~r~h~~~~  186 (426)
                      ..|.....|..| ++.|.++++|.|++|++.| .....|+.|+++|++++|.|+ |++.|.....|..| +++|++..
T Consensus        14 ~~~~~~~~~~~~-~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           14 PVYAAGSLEEQW-YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             CSSCTTCHHHHH-HHHHHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCCchHHHHH-HHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            466677788888 5788899999999999999 999999999999999999996 99999999999999 88987654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=5.8e-13  Score=101.88  Aligned_cols=70  Identities=24%  Similarity=0.457  Sum_probs=55.5

Q ss_pred             hccCccccCCCCccccccCCcccCCchhHHHHhh-hccCccccccccCcccc-CcceeCCCCCCCCCCcccccCCHHHHH
Q 037502           44 VSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRR-RHKVPWKLLKRETPVVR-KRVFVCPEPSCLHHDPCHALGDLVGIK  121 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~~~~~~~~~-~k~~~C~~C~c~~~~~~~~f~~~~~l~  121 (426)
                      +..|+++|++++||+|++|++.|.....|..|++ .|             .+ .++|.|++|+       +.|.....|.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h-------------~~~~~~~~C~~C~-------~~f~~~~~L~   62 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH-------------TENVAKFHCPHCD-------TVIARKSDLG   62 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHS-------------SSSCSSEECSSSS-------CEESSHHHHH
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhc-------------CCCCCccCCCCCC-------CccCCHHHHH
Confidence            5678888889999999999999999999999987 45             34 3788888877       8888888888


Q ss_pred             HHHHhhhCCCCc
Q 037502          122 KHFRRKHSNHKQ  133 (426)
Q Consensus       122 ~H~~r~H~~~k~  133 (426)
                      .|++..|.++.|
T Consensus        63 ~H~~~~H~~~~p   74 (77)
T 2ct1_A           63 VHLRKQHSYSGP   74 (77)
T ss_dssp             HHHHHTSCCSCC
T ss_pred             HHHHHhCCCCCC
Confidence            886556666555

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.37  E-value=7.5e-13  Score=100.46  Aligned_cols=64  Identities=23%  Similarity=0.475  Sum_probs=46.7

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhC
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHS  129 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~  129 (426)
                      .+.++++|+|+.|++.|.....|..|+++|             .++++|.|.+|+       +.|.....|..| +++|+
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H-------------~~~~~~~C~~C~-------k~f~~~~~L~~H-~~~H~   69 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVH-------------TGEKPYRCNICG-------AQFNRPANLKTH-TRIHS   69 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHH-------------CCCCSEECTTTC-------CEESCHHHHHHH-HHHHC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHc-------------CCCCCEECCCCC-------chhCCHHHHHHH-HHhcC
Confidence            455667777777777777777777777777             566777777776       777777777777 46677


Q ss_pred             CCCcc
Q 037502          130 NHKQW  134 (426)
Q Consensus       130 ~~k~~  134 (426)
                      +++||
T Consensus        70 ~~kp~   74 (74)
T 2lce_A           70 GEKPY   74 (74)
T ss_dssp             CSCCC
T ss_pred             CCCCC
Confidence            77765

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.1e-12  Score=105.34  Aligned_cols=76  Identities=17%  Similarity=0.266  Sum_probs=69.1

Q ss_pred             cccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCccccc-CCHHHHHHHHHhhhCCCCccccccCCCc
Q 037502           64 QGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHAL-GDLVGIKKHFRRKHSNHKQWVCEKCSKG  142 (426)
Q Consensus        64 k~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f-~~~~~l~~H~~r~H~~~k~~~C~~C~k~  142 (426)
                      ..|.....|..|++.|             .++++|.|++|+       +.| .....|..| +++| ++++|.|.+||+.
T Consensus        14 ~~~~~~~~~~~~~~~~-------------~~~~~~~C~~C~-------k~F~~~~~~L~~H-~~~h-~~k~~~C~~Cgk~   71 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEI-------------VDKGSVSCPTCQ-------AVGRKTIEGLKKH-MENC-KQEMFTCHHCGKQ   71 (96)
T ss_dssp             CSSCTTCHHHHHHHHH-------------HHTSCEECTTTC-------SCEESSHHHHHHH-HHHH-CCCCCCCSSSCCC
T ss_pred             CCCCCchHHHHHHHHh-------------cCCCCcCCCCCC-------CCcccCHHHHHHH-HHHH-CCCCeECCCCCCe
Confidence            4677889999999999             689999999999       999 999999999 5789 9999999999999


Q ss_pred             ccChhhHHHH-HHHcCCCCe
Q 037502          143 YAVQSDYKAH-LKTCGTRGH  161 (426)
Q Consensus       143 f~~~~~L~~H-~~~h~~kp~  161 (426)
                      |.....|+.| +++|.++||
T Consensus        72 F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           72 LRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CSSHHHHHHHHHHHTCCCSS
T ss_pred             eCCHHHHHHHhHHhcCCCCC
Confidence            9999999999 777876665

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=4.2e-13  Score=99.34  Aligned_cols=60  Identities=22%  Similarity=0.445  Sum_probs=50.1

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-c--CCCCeecc-CCcccCChhhHHHHHHHhcC
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-C--GTRGHSCD-CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h--~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      +++|+++++|.|++|++.|.....|..|+++ |  ++++|.|+ |++.|...+.|..|+++|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4678888888888888888888888888887 6  67888886 88888888888888888765

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=9.6e-14  Score=104.51  Aligned_cols=69  Identities=14%  Similarity=0.208  Sum_probs=62.7

Q ss_pred             CCCCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhccCc
Q 037502            3 ANNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVP   82 (426)
Q Consensus         3 ~~~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~   82 (426)
                      .+..|+++|.+++||.|.+||+.|.....|..                   +++|+|++||+.|.....|..|+++|   
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------------------~~~~~C~~C~~~f~~~~~l~~H~~~H---   62 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------------------RKTPMCEKCRKDSCQEAALNKDEGNE---   62 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------------------SSSCCCHHHHHTCSCCCSSCCCSSCC---
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------------------CCCCCCCCCChhhcCHHHHHHHHHhh---
Confidence            56889999999999999999999999887433                   67999999999999999999999999   


Q ss_pred             cccccccCccccCcceeCCCC
Q 037502           83 WKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        83 ~~~~~~~~~~~~~k~~~C~~C  103 (426)
                                .++++|.|++|
T Consensus        63 ----------~~~~~~~C~~C   73 (73)
T 2ctu_A           63 ----------SGKKTSGPSSG   73 (73)
T ss_dssp             ----------CCCCCSSCCCC
T ss_pred             ----------cCCCCCCCCCC
Confidence                      68899999987

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.1e-12  Score=99.12  Aligned_cols=62  Identities=29%  Similarity=0.574  Sum_probs=55.5

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHhcCCC
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDACSKGH  186 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~~  186 (426)
                      .++|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.....|..|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3578899999999999999999999999999 589999996 9999999999999999997764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.1e-12  Score=98.33  Aligned_cols=62  Identities=16%  Similarity=0.329  Sum_probs=47.5

Q ss_pred             hhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHhcCCCCC
Q 037502          127 KHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDACSKGHIR  188 (426)
Q Consensus       127 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~~~~  188 (426)
                      .|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.....|..|+++|+++.+.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            35677788888888888888888888877 477788885 888888888888888887776543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=4e-13  Score=108.14  Aligned_cols=79  Identities=18%  Similarity=0.303  Sum_probs=70.7

Q ss_pred             cccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccC-CHHHHHHHHHhhhCC-CCccccccCCC
Q 037502           64 QGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALG-DLVGIKKHFRRKHSN-HKQWVCEKCSK  141 (426)
Q Consensus        64 k~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~-~~~~l~~H~~r~H~~-~k~~~C~~C~k  141 (426)
                      ..+.....+..|+++|             .++++|.|.+|+       +.|. ....|..|+ ++|.+ +++|.|.+|++
T Consensus         4 ~s~~~~~~~~~h~~~h-------------~~~~~~~C~~C~-------k~f~~~~~~L~~H~-~~h~~~~~~~~C~~C~k   62 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAI-------------HERGEAVCPTCN-------VVTRKTLVGLKKHM-EVCQKLQDALKCQHCRK   62 (98)
T ss_dssp             CCCCCCCSCSHHHHTT-------------TTTSCCCCTTTC-------CCCSSCSHHHHHHH-HHHHHHHHHHSCSSSCC
T ss_pred             CCCCCCCcHHHHHHHh-------------ccCCCcCCCCCC-------CChhhhHHHHHHHH-HHHcCCCCCEECCCCCC
Confidence            4566677788999999             789999999999       9999 999999995 78888 99999999999


Q ss_pred             cccChhhHHHHHHH-cCCCCeec
Q 037502          142 GYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       142 ~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      .|.....|..|+++ |+++|+..
T Consensus        63 ~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           63 QFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             ccCCHHHHHHHHHHHcCCCCCCC
Confidence            99999999999999 79988654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.7e-12  Score=97.97  Aligned_cols=64  Identities=27%  Similarity=0.474  Sum_probs=45.7

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHh
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRR  126 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r  126 (426)
                      +.++|+++++|+|++|++.|.....|..|+++|             .++++|.|++|+       +.|.....|..| ++
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~L~~H-~~   63 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH-------------TGEKPYKCLECG-------KAFSQNSGLINH-QR   63 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGG-------------GCSCCEECSSSC-------CEESSHHHHHHH-HH
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhc-------------CCCCCeECCCCC-------cccCCHHHHHHH-HH
Confidence            345677777777777777777777777777777             566777777766       777777777777 35


Q ss_pred             hhCCC
Q 037502          127 KHSNH  131 (426)
Q Consensus       127 ~H~~~  131 (426)
                      +|+++
T Consensus        64 ~H~~~   68 (72)
T 1x6e_A           64 IHTSG   68 (72)
T ss_dssp             HHHSS
T ss_pred             hcCCC
Confidence            56554

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.8e-12  Score=105.41  Aligned_cols=65  Identities=18%  Similarity=0.218  Sum_probs=59.1

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhh---CCCCccccccCCCcccChhhHHHH-HHH-cCCCCeecc
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKH---SNHKQWVCEKCSKGYAVQSDYKAH-LKT-CGTRGHSCD  164 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H---~~~k~~~C~~C~k~f~~~~~L~~H-~~~-h~~kp~~C~  164 (426)
                      .|+++|.|.+|+       +.|.....|..|++.+|   ++++||+|++||+.|.....|..| +++ .|++||.|.
T Consensus        14 ~gekpy~C~~Cg-------k~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           14 KVEGGYECKYCT-------FQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCCSSEECSSCS-------CEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCCcCcCCCCCC-------CccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            789999999998       99999999999964469   678999999999999999999999 788 599999995

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=2.3e-12  Score=98.72  Aligned_cols=71  Identities=21%  Similarity=0.264  Sum_probs=56.0

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhC
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHS  129 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~  129 (426)
                      +|+++++|+|++|++.|.....|..|+++|++.          .++++|.|.+|+       +.|.....|..|+++.|.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~----------~~~~~~~C~~C~-------k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAET----------VAALRFPCEFCG-------KRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHH----------TTTCCEECTTTC-------CEESSHHHHHHHHHHTST
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc----------CCCcccCCCCCC-------chhCCHHHHHHHHHHhCC
Confidence            477888999999999999999999999888310          137788888887       888888888888767888


Q ss_pred             CCCccccc
Q 037502          130 NHKQWVCE  137 (426)
Q Consensus       130 ~~k~~~C~  137 (426)
                      ++++....
T Consensus        64 ~~~~~~~~   71 (78)
T 2d9h_A           64 ALLLAPQE   71 (78)
T ss_dssp             TTSSCCSS
T ss_pred             CCCCCccc
Confidence            77766544

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=2.5e-12  Score=96.43  Aligned_cols=62  Identities=21%  Similarity=0.311  Sum_probs=38.5

Q ss_pred             cCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCC
Q 037502           51 LLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSN  130 (426)
Q Consensus        51 h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~  130 (426)
                      |+++++|+|++|++.|.....|..|+++|             .++++|.|++|+       +.|.....|..| +++|.+
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C~-------~~f~~~~~L~~H-~~~h~~   62 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIH-------------CTDRPFKCNYCS-------FDTKQPSNLSKH-MKKFHG   62 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGG-------------CCSCSEECSSSS-------CEESSHHHHHHH-HHHHHS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHc-------------CCCCCEeCCCCC-------CccCCHHHHHHH-HHHHhC
Confidence            55566666666666666666666666666             455666666665       666666666666 345555


Q ss_pred             CCc
Q 037502          131 HKQ  133 (426)
Q Consensus       131 ~k~  133 (426)
                      ++|
T Consensus        63 ~~p   65 (70)
T 1x5w_A           63 DMS   65 (70)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.29  E-value=8.2e-13  Score=103.69  Aligned_cols=64  Identities=19%  Similarity=0.283  Sum_probs=57.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHh-hhcc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHR-RRHK   80 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~-r~H~   80 (426)
                      ..+..++.+.++|.|++||+.|..+..            |..|+++|++++||+|++|++.|.+..+|..|+ +.|.
T Consensus        17 ~~~~~~~~~~~~h~C~~Cgk~F~~~~~------------L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           17 AGVLGLSASAECHLCPVCGESFASKGA------------QERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             CSCCSSCCCCTTEECTTSCCEESSHHH------------HHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCCCCCCEECCCCCCCcCcHHH------------HhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            344567888899999999999999986            899999999999999999999999999999997 4673

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.8e-12  Score=99.07  Aligned_cols=61  Identities=21%  Similarity=0.374  Sum_probs=35.5

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cC--CCCeecc-CCcccCChhhHHHHHHHhcCC
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CG--TRGHSCD-CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~--~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      +++|+++++|.|.+|++.|.....|..|++. |.  +++|.|. |++.|.....|..|++++++.
T Consensus         7 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            7 GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             ccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            3455666666666666666666666666653 42  2566664 666666666666666655443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.28  E-value=3.6e-12  Score=91.23  Aligned_cols=53  Identities=21%  Similarity=0.389  Sum_probs=30.8

Q ss_pred             CCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHhc
Q 037502          131 HKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDACS  183 (426)
Q Consensus       131 ~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~  183 (426)
                      +++|.|.+|++.|.....|..|+++ ++++||.|. |++.|.....|..|+++|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4556666666666666666666666 356666664 6666666666666666554

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.26  E-value=6.5e-12  Score=95.19  Aligned_cols=61  Identities=15%  Similarity=0.383  Sum_probs=32.8

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCe
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGH  161 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~  161 (426)
                      .++++|.|..|+       +.|.....|..| +++|.++++|+|.+|++.|.....|..|+++ ++++||
T Consensus        13 ~~~~~~~C~~C~-------k~f~~~~~l~~H-~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRCQ-------ASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTSS-------CCBSCHHHHHHH-HHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCCC-------ceeCCHHHHHHH-HHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            345555555555       555555555555 3455555555555555555555555555555 344443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=7.2e-12  Score=95.87  Aligned_cols=59  Identities=19%  Similarity=0.406  Sum_probs=52.1

Q ss_pred             hhCCCCccccccCCCcccChhhHHHHHHHc-C---CCCeecc-CCcccCChhhHHHHHHHhcCC
Q 037502          127 KHSNHKQWVCEKCSKGYAVQSDYKAHLKTC-G---TRGHSCD-CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       127 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h-~---~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      +|+++++|.|.+|++.|.....|..|+++| +   +++|.|. |++.|.....|..|++.++..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            378999999999999999999999999994 4   8999996 999999999999999665444

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=6.4e-12  Score=94.81  Aligned_cols=64  Identities=17%  Similarity=0.515  Sum_probs=53.3

Q ss_pred             HHHHHHhhhCCCCccccc--cCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHhc
Q 037502          120 IKKHFRRKHSNHKQWVCE--KCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDACS  183 (426)
Q Consensus       120 l~~H~~r~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~  183 (426)
                      +..|+..+|.++++|.|.  .|++.|.....|..|+++ +++++|.|. ||+.|...+.|..|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            344555678889999997  599999999999999988 588999996 9999999999999998873

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=2.1e-11  Score=88.21  Aligned_cols=57  Identities=26%  Similarity=0.572  Sum_probs=43.0

Q ss_pred             CccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      +||+|++|++.|.....|..|+++|             .++++|.|++|+       +.|.....|..|++++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSH-------------TNEKPYPCGLCN-------RAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTT-------------TSSCSEECTTTC-------CEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHh-------------CCCCCccCCCCC-------CccCCHHHHHHHHHHHcCCc
Confidence            4678888888888888888888777             567777777777       77777777777765667654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.18  E-value=2.5e-11  Score=86.77  Aligned_cols=53  Identities=23%  Similarity=0.510  Sum_probs=29.4

Q ss_pred             ccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHhcCC
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      ||.|.+|++.|.....|..|+++ +++++|.|+ |++.|.....|..|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            35555555555555555555555 355555554 555555555555555555443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=2.4e-11  Score=89.71  Aligned_cols=58  Identities=21%  Similarity=0.408  Sum_probs=53.3

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhh-CCCCccccccCCCcccChhhHHHHHHH-cC
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKH-SNHKQWVCEKCSKGYAVQSDYKAHLKT-CG  157 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H-~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~  157 (426)
                      .++++|.|+.|+       +.|.....|..|++..| .++++|.|++|++.|.....|..|+++ |+
T Consensus         6 ~~~k~~~C~~C~-------k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            6 EGEHTYRCKVCS-------RVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EETTEEECTTTC-------CEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcceECCCCc-------chhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            689999999999       99999999999964448 699999999999999999999999998 65

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.17  E-value=2.8e-11  Score=86.50  Aligned_cols=54  Identities=20%  Similarity=0.313  Sum_probs=48.3

Q ss_pred             cCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH
Q 037502           94 RKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus        94 ~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      |+++|.|++|+       +.|.....|..| +++|+++++|.|.+|++.|.....|..|+++
T Consensus         1 g~~~~~C~~C~-------~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            1 GSSSRECSYCG-------KFFRSNYYLNIH-LRTHTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             ----CBCTTTC-------CBCSCHHHHHHH-HHHHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCccCCCCc-------chhCChHHHHHH-HHHcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            46899999999       999999999999 5789999999999999999999999999998

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=6.2e-13  Score=99.97  Aligned_cols=68  Identities=16%  Similarity=0.174  Sum_probs=58.9

Q ss_pred             hccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHH
Q 037502           44 VSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKH  123 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H  123 (426)
                      |..|+++|.++++|.|++||+.|.....|..                    +++|.|++|+       +.|.....|..|
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------------------~~~~~C~~C~-------~~f~~~~~l~~H   58 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------------------RKTPMCEKCR-------KDSCQEAALNKD   58 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------------------SSSCCCHHHH-------HTCSCCCSSCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------------------CCCCCCCCCC-------hhhcCHHHHHHH
Confidence            7788889999999999999999998887743                    4678999988       889999999999


Q ss_pred             HHhhhCCCCccccccC
Q 037502          124 FRRKHSNHKQWVCEKC  139 (426)
Q Consensus       124 ~~r~H~~~k~~~C~~C  139 (426)
                       +++|+++++|.|++|
T Consensus        59 -~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           59 -EGNESGKKTSGPSSG   73 (73)
T ss_dssp             -SSCCCCCCCSSCCCC
T ss_pred             -HHhhcCCCCCCCCCC
Confidence             578999999999887

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.13  E-value=4.7e-11  Score=85.29  Aligned_cols=55  Identities=22%  Similarity=0.477  Sum_probs=32.4

Q ss_pred             ccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      ||+|++||+.|.....|..|+++|             .++++|.|++|+       +.|.....|..| +++|.++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H-~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTH-------------TDVRPYHCTYCN-------FSFKTKGNLTKH-MKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHT-------------SSCCCEECSSSS-------CEESSHHHHHHH-HHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhc-------------CCCCCccCCCCC-------chhcCHHHHHHH-HHHhccc
Confidence            456666666666666666666666             455556666655       556666666666 3455444

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5e-11  Score=81.46  Aligned_cols=45  Identities=20%  Similarity=0.280  Sum_probs=41.1

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGT-------------SCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.11  E-value=5.2e-11  Score=81.37  Aligned_cols=45  Identities=18%  Similarity=0.330  Sum_probs=41.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|++++||+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH-------------VGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGG-------------SSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHc-------------CCCCCcCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=6.7e-11  Score=85.50  Aligned_cols=47  Identities=32%  Similarity=0.779  Sum_probs=27.4

Q ss_pred             ccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQ  179 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~  179 (426)
                      ||.|.+|++.|.....|..|+++ +++++|.|. |++.|.....|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            45555566666555555556555 355556664 666666666666664

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.2e-11  Score=81.28  Aligned_cols=45  Identities=22%  Similarity=0.275  Sum_probs=41.8

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|++++||+|++||+.|.+..+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH-------------SGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHC-------------CSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhc-------------CCCCCCCCCCC
Confidence            5788999999999999999999999999999999             68899999886

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.1e-11  Score=81.41  Aligned_cols=45  Identities=24%  Similarity=0.391  Sum_probs=41.0

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH-------------SGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGG-------------SSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHh-------------cCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.10  E-value=5.5e-11  Score=81.29  Aligned_cols=45  Identities=20%  Similarity=0.307  Sum_probs=41.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHH-------------SSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.09  E-value=5.7e-11  Score=81.09  Aligned_cols=45  Identities=20%  Similarity=0.255  Sum_probs=40.7

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH-------------TGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGS-------------SSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            5778899999999999999999999999999999             68899999886

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.4e-11  Score=81.33  Aligned_cols=45  Identities=20%  Similarity=0.349  Sum_probs=40.8

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|++++||+|++||+.|.+..+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGT-------------SCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             68899999886

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.5e-11  Score=80.80  Aligned_cols=45  Identities=20%  Similarity=0.315  Sum_probs=41.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH-------------TGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHH-------------SCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6e-11  Score=81.03  Aligned_cols=45  Identities=18%  Similarity=0.261  Sum_probs=41.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH-------------TAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHT-------------TCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=7.3e-11  Score=80.68  Aligned_cols=45  Identities=29%  Similarity=0.453  Sum_probs=40.1

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|++++||+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH-------------MGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGG-------------GSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhc-------------CCCCCCCCCCC
Confidence            3678889999999999999999999999999999             67889999886

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.4e-11  Score=80.82  Aligned_cols=45  Identities=22%  Similarity=0.274  Sum_probs=41.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH-------------VDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHC-------------CSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.3e-11  Score=80.94  Aligned_cols=45  Identities=20%  Similarity=0.373  Sum_probs=41.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTT-------------SSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.9e-11  Score=81.47  Aligned_cols=45  Identities=18%  Similarity=0.239  Sum_probs=41.6

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHH-------------HCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            5788999999999999999999999999999999             68899999886

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.09  E-value=6.4e-11  Score=80.96  Aligned_cols=45  Identities=20%  Similarity=0.338  Sum_probs=39.8

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHH-------------SCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            3678889999999999999999999999999999             67889999886

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.9e-11  Score=80.99  Aligned_cols=45  Identities=20%  Similarity=0.274  Sum_probs=41.1

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH-------------TGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGG-------------SCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.3e-11  Score=81.26  Aligned_cols=45  Identities=18%  Similarity=0.210  Sum_probs=41.8

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHH-------------SCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            5788999999999999999999999999999999             68899999886

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.6e-11  Score=80.76  Aligned_cols=45  Identities=18%  Similarity=0.205  Sum_probs=41.2

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH-------------TGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTT-------------TTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6e-11  Score=81.04  Aligned_cols=45  Identities=20%  Similarity=0.332  Sum_probs=41.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH-------------TKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHT-------------SCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.08  E-value=6e-11  Score=81.03  Aligned_cols=45  Identities=22%  Similarity=0.355  Sum_probs=40.7

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGG-------------GCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhc-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             68899999886

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=5.8e-11  Score=80.32  Aligned_cols=44  Identities=14%  Similarity=0.296  Sum_probs=40.8

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      |+++|++++||+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH-------------AEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHH-------------TSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            678899999999999999999999999999999             68899999886

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5e-11  Score=81.43  Aligned_cols=45  Identities=20%  Similarity=0.355  Sum_probs=41.5

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHH-------------HCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.1e-11  Score=81.48  Aligned_cols=45  Identities=24%  Similarity=0.350  Sum_probs=41.5

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH-------------FREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHH-------------HSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHH-------------cCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.7e-11  Score=81.17  Aligned_cols=45  Identities=22%  Similarity=0.309  Sum_probs=41.0

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH-------------TGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHH-------------HSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.5e-11  Score=80.48  Aligned_cols=45  Identities=22%  Similarity=0.325  Sum_probs=41.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|++++||+|++||+.|.....|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGG-------------CCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.7e-11  Score=80.55  Aligned_cols=45  Identities=20%  Similarity=0.272  Sum_probs=40.2

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.+..+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH-------------SGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTT-------------CCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            3678889999999999999999999999999999             67899999886

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.1e-11  Score=81.00  Aligned_cols=45  Identities=22%  Similarity=0.336  Sum_probs=41.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|++++||+|++||+.|....+|..|+++|             .++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH-------------AGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHH-------------TTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.2e-11  Score=80.58  Aligned_cols=45  Identities=20%  Similarity=0.310  Sum_probs=40.8

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTT-------------TTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhc-------------CCCCCCCCCCC
Confidence            4788899999999999999999999999999999             67889999886

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.2e-11  Score=80.63  Aligned_cols=45  Identities=20%  Similarity=0.253  Sum_probs=40.6

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++|++.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTT-------------TTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            3778899999999999999999999999999999             68899999886

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.6e-11  Score=80.84  Aligned_cols=45  Identities=16%  Similarity=0.264  Sum_probs=38.5

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGG-------------SSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            4677888888999999999999999999999888             67888888876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.6e-11  Score=80.84  Aligned_cols=45  Identities=20%  Similarity=0.287  Sum_probs=40.6

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTT-------------CCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhc-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             67899999886

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.4e-11  Score=80.91  Aligned_cols=45  Identities=20%  Similarity=0.279  Sum_probs=40.5

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTT-------------CCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             67899999886

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=7.8e-11  Score=80.47  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=40.1

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGG-------------TTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            3678889999999999999999999999999999             67889999886

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=7.1e-11  Score=80.74  Aligned_cols=45  Identities=20%  Similarity=0.285  Sum_probs=41.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTT-------------SCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            4788899999999999999999999999999999             68899999886

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.07  E-value=8.2e-11  Score=80.29  Aligned_cols=45  Identities=20%  Similarity=0.260  Sum_probs=40.6

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH-------------SGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGG-------------TSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             67889999886

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.9e-11  Score=80.73  Aligned_cols=45  Identities=20%  Similarity=0.268  Sum_probs=41.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHH-------------SSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHH-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999886

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.2e-11  Score=80.63  Aligned_cols=45  Identities=20%  Similarity=0.322  Sum_probs=40.8

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGG-------------SCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            5778899999999999999999999999999999             67899999886

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.7e-11  Score=80.48  Aligned_cols=45  Identities=20%  Similarity=0.282  Sum_probs=40.9

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTT-------------TTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            5788899999999999999999999999999999             68899999875

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=7.7e-11  Score=80.42  Aligned_cols=45  Identities=18%  Similarity=0.252  Sum_probs=40.6

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|+|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVH-------------MGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTT-------------CCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             68899999886

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.06  E-value=1e-10  Score=79.98  Aligned_cols=45  Identities=22%  Similarity=0.347  Sum_probs=41.1

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH-------------TREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGG-------------CCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             68899999886

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.4e-11  Score=80.30  Aligned_cols=45  Identities=27%  Similarity=0.352  Sum_probs=41.1

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|++++||+|++||+.|.....|..|+++|             .++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH-------------TGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHH-------------TCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             68899999886

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1e-10  Score=79.88  Aligned_cols=45  Identities=20%  Similarity=0.297  Sum_probs=40.8

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|++++||+|++||+.|.....|..|+++|             .++++|.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH-------------SGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHS-------------CCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            3678899999999999999999999999999999             68899999886

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.1e-11  Score=80.37  Aligned_cols=45  Identities=27%  Similarity=0.417  Sum_probs=39.7

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH-------------TGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTS-------------CSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhh-------------CCCCCCCCCCC
Confidence            4678888999999999999999999999999998             67889999886

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.05  E-value=1.7e-10  Score=91.39  Aligned_cols=61  Identities=20%  Similarity=0.263  Sum_probs=45.7

Q ss_pred             ccccccCCcccCCchhHHHHhhh-ccCccccccccCccccCcc--------eeCCCCCCCCCCcccccCCHHHHHHHHHh
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRR-HKVPWKLLKRETPVVRKRV--------FVCPEPSCLHHDPCHALGDLVGIKKHFRR  126 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~-H~~~~~~~~~~~~~~~~k~--------~~C~~C~c~~~~~~~~f~~~~~l~~H~~r  126 (426)
                      .|.|++|++.|....+|..|+++ |             .++++        |.|.+|+       +.|.....|..| ++
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H-------------~~~~~~~~~~c~~~~C~~C~-------k~f~~~~~L~~H-~~   83 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEH-------------VGGPEQNNHVCYWEECPREG-------KSFKAKYKLVNH-IR   83 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTT-------------TCCTTCSCCCCCCTTCSSTT-------CCCSSHHHHHHH-HH
T ss_pred             CCcccccccccCCHHHHHHHHHHhc-------------cCCCCCCccceeccCCCCCC-------cccCCHHHHHHH-HH
Confidence            47899999999999999999988 6             45555        6676666       667777777777 35


Q ss_pred             hhCCCCccccc
Q 037502          127 KHSNHKQWVCE  137 (426)
Q Consensus       127 ~H~~~k~~~C~  137 (426)
                      +|+++++|+|+
T Consensus        84 ~H~~~k~~~C~   94 (95)
T 2ej4_A           84 VHTGEKSGPSS   94 (95)
T ss_dssp             HHHTCCCCSSC
T ss_pred             hcCCCCCCCCC
Confidence            67677777664

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.2e-11  Score=80.23  Aligned_cols=45  Identities=20%  Similarity=0.268  Sum_probs=40.7

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|++++||+|++||+.|.+...|..|+++|             .++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH-------------TGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHH-------------HSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            3678899999999999999999999999999999             67899999886

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=9.9e-11  Score=79.92  Aligned_cols=45  Identities=16%  Similarity=0.101  Sum_probs=40.8

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLH-------------MGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHH-------------SCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             68899999886

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8.7e-11  Score=80.22  Aligned_cols=45  Identities=20%  Similarity=0.284  Sum_probs=41.1

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHH-------------SSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             68899999886

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.1e-10  Score=79.73  Aligned_cols=45  Identities=22%  Similarity=0.404  Sum_probs=40.9

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH-------------TGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHH-------------HCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHH-------------cCCCCCCCCCC
Confidence            3678899999999999999999999999999999             68899999886

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.6e-10  Score=79.07  Aligned_cols=45  Identities=20%  Similarity=0.250  Sum_probs=40.7

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhh-hccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRR-RHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++||+.|.....|..|++ +|             .++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H-------------~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH-------------TGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTT-------------TTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhc-------------CCCCCCCCCCC
Confidence            47788999999999999999999999999999 88             68899999886

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.7e-10  Score=85.45  Aligned_cols=54  Identities=22%  Similarity=0.353  Sum_probs=36.5

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccc-cCCCcccChhhHHHHHHHc
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCE-KCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~-~C~k~f~~~~~L~~H~~~h  156 (426)
                      .++++|.|..|+       +.|. ...|..|+ ++ ++++||.|+ .||+.|...+.|..|+++|
T Consensus         6 C~~~~~~C~~C~-------k~f~-~~~L~~H~-~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            6 SGKRTQPCTYCT-------KEFV-FDTIQSHQ-YQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCEEECSSSC-------CEEE-HHHHHHHH-HH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCCCCeeccccC-------CccC-HHHHHHHH-HH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            456677777766       6777 77777774 44 667777777 6777777777777776663

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.9e-10  Score=78.52  Aligned_cols=45  Identities=18%  Similarity=0.274  Sum_probs=40.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .|+++|+++++|+|++|++.|....+|..|+++|             .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHH-------------CCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             68899999874

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.4e-10  Score=79.23  Aligned_cols=46  Identities=20%  Similarity=0.200  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            1 GSSGSSGTGEKPFKCGECGKSYNQRVH------------LTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCSEECTTTCCEESSSHH------------HHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCCeECCCCCcccCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            579999999999999999999999886            8888899999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.00  E-value=9.8e-11  Score=80.01  Aligned_cols=46  Identities=17%  Similarity=0.247  Sum_probs=43.3

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      ++|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            1 GSSGSSGTGEKPFKCVECGKGFSRRSA------------LNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCCSBCCSSSCCCBSSTTH------------HHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCCcccCccCcccCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.6e-11  Score=80.07  Aligned_cols=46  Identities=13%  Similarity=0.235  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      ++|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~h~~~h~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            1 GSSGSSGSVEKPYKCEDCGKGYNRRLN------------LDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSSCBCSSSCCBCSSHHH------------HHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCCeeCcccCchhCCHHH------------HHHHHHhcCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=3.3e-10  Score=85.19  Aligned_cols=59  Identities=24%  Similarity=0.469  Sum_probs=37.1

Q ss_pred             cccCCCCccccc--cCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHh
Q 037502           49 KTLLESDRYVCE--ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRR  126 (426)
Q Consensus        49 ~~h~~~~py~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r  126 (426)
                      .+|.++++|.|+  .||+.|.....|..|+++|             .++++|.|++|+       +.|.....|..|+ +
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h-------------~~~~~~~C~~C~-------~~f~~~~~l~~H~-~   70 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIH-------------TGQKPFQCRICM-------RNFSRSDHLTTHI-R   70 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHH-------------HCCCCEECTTTC-------CEESCHHHHHHHH-T
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhh-------------CCCCCeECCCCC-------chhCCHHHHHHHH-H
Confidence            445566667775  4777776666666666666             455666666665       6666666666663 4


Q ss_pred             hh
Q 037502          127 KH  128 (426)
Q Consensus       127 ~H  128 (426)
                      +|
T Consensus        71 ~H   72 (73)
T 1f2i_G           71 TH   72 (73)
T ss_dssp             TC
T ss_pred             hc
Confidence            44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.8e-10  Score=77.66  Aligned_cols=44  Identities=20%  Similarity=0.289  Sum_probs=40.0

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTT-------------TTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhh-------------CCCCCCCCCC
Confidence            5788899999999999999999999999999999             6889999875

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.99  E-value=1e-10  Score=79.78  Aligned_cols=46  Identities=7%  Similarity=0.109  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            1 GSSGSSGTGVKPYGCSQCAKTFSLKSQ------------LIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCSEECSSSSCEESSHHH------------HHHHGGGSSSCCCSCCTTC
T ss_pred             CccccCCCCCCceECCCCCchhCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.4e-11  Score=80.05  Aligned_cols=46  Identities=13%  Similarity=0.180  Sum_probs=43.2

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      |.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            1 GSSGSSGTGEKPYECSVCGKAFSHRQS------------LSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCSEECSSSCCEESSHHH------------HHHHHGGGSSCCCSCSSCC
T ss_pred             CCccCCcCCCCCeeCCCcCCccCCHHH------------HHHHHHHhcCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.98  E-value=8.9e-11  Score=80.16  Aligned_cols=46  Identities=13%  Similarity=0.107  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            1 GSSGSSGTGEKRYKCNECGKVFSRNSQ------------LSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCTTSCCEECSSSCCEESSHHH------------HHHHHTGGGCCCCCSSSCC
T ss_pred             CCCccCCCCCcCcCCCCCcchhCCHHH------------HHHHHHhcCCCCCCCCCCC
Confidence            579999999999999999999999886            8889999999999999988

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.4e-10  Score=77.21  Aligned_cols=44  Identities=20%  Similarity=0.335  Sum_probs=39.9

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGG-------------CCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHc-------------CCCCCCCCCC
Confidence            5788899999999999999999999999999999             6889999875

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.4e-10  Score=79.24  Aligned_cols=46  Identities=11%  Similarity=0.101  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            1 GSSGSSGTGKKPYKCNECGKVFTQNSH------------LARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSSCBCTTTCCBCSSHHH------------HHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCcCCCCCcCeECCCCCCeeCCHHH------------HHHHhhhcCCCCCCCCCCC
Confidence            468999999999999999999999886            8899999999999999988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.98  E-value=3e-10  Score=75.83  Aligned_cols=42  Identities=21%  Similarity=0.389  Sum_probs=38.5

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP  101 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~  101 (426)
                      |+++|+++++|+|++||+.|.+..+|..|+++|             .++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTH-------------AGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGG-------------CCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhc-------------CCCCCCCCC
Confidence            577899999999999999999999999999999             688999884

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.1e-10  Score=79.68  Aligned_cols=46  Identities=13%  Similarity=0.174  Sum_probs=43.0

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      ++|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            1 GSSGSSGAGEKPYGCSECGKAFSSKSY------------LIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCSSCCCSCBCSSSCCBCSCHHH------------HHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCcCcCCCCCcCCCccChhhCChHH------------HHHHHHHhCCCCCCCCCCC
Confidence            579999999999999999999999886            8889999999999999988

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.98  E-value=2.8e-10  Score=77.69  Aligned_cols=44  Identities=18%  Similarity=0.281  Sum_probs=40.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHH-------------TTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            4788999999999999999999999999999999             6889999975

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.6e-10  Score=77.00  Aligned_cols=44  Identities=20%  Similarity=0.326  Sum_probs=40.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH-------------TGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGG-------------SSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            5788999999999999999999999999999999             6889999975

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.9e-10  Score=77.64  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=40.2

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++|++.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHH-------------SSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhc-------------CCCCCCCCCC
Confidence            4778899999999999999999999999999999             6889999975

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.6e-10  Score=77.15  Aligned_cols=44  Identities=23%  Similarity=0.437  Sum_probs=40.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++|++.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTT-------------SSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHc-------------CCCCCCCCCC
Confidence            4788899999999999999999999999999999             6889999975

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.2e-10  Score=79.53  Aligned_cols=46  Identities=13%  Similarity=0.088  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      ++|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            1 GSSGSSGTGEKPYKCEECGKGFICRRD------------LYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCCCSEECSSSCCEESCHHH------------HHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCCcCccCCCccchhCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            479999999999999999999999886            8899999999999999988

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.3e-10  Score=77.27  Aligned_cols=44  Identities=20%  Similarity=0.299  Sum_probs=40.0

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTT-------------SCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhc-------------CCCCCCCCCC
Confidence            4788899999999999999999999999999999             6889999875

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.1e-10  Score=79.62  Aligned_cols=46  Identities=11%  Similarity=0.115  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            1 GSSGSSGTGEKPYKCHECGKVFRRNSH------------LARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCTTCCCCEECTTTCCEESSHHH------------HHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCcCCCCCCCeECCCCCchhCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            578999999999999999999999886            8889999999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.1e-10  Score=79.73  Aligned_cols=46  Identities=13%  Similarity=0.117  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            1 GSSGSSGTGEKPYKCNECGKVFRHNSY------------LSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCSSSEECSSSCCEESSHHH------------HHHHHTTTCCCCCCSCCCC
T ss_pred             CCcccCCCCCCCeECCCCCchhCChHH------------HHHHHhhcCCCCCCCCCCC
Confidence            479999999999999999999999886            8889999999999999988

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.1e-10  Score=76.87  Aligned_cols=44  Identities=20%  Similarity=0.347  Sum_probs=39.9

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|.|++|++.|.....|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGG-------------TTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhc-------------CCCCCCCCCC
Confidence            5788899999999999999999999999999999             6889999875

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3e-10  Score=77.39  Aligned_cols=44  Identities=18%  Similarity=0.322  Sum_probs=40.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH-------------SGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHH-------------CCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHc-------------CCCCCCCCCC
Confidence            5788899999999999999999999999999999             6889999975

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.97  E-value=1.3e-10  Score=79.22  Aligned_cols=46  Identities=13%  Similarity=0.081  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            1 GSSGSSGTGEKPYNCKECGKSFRWASC------------LLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCSCCCCCSEECSSSCCEESSHHH------------HHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCCcCeECCccccccCChHH------------HHHHHHHhCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1e-10  Score=79.88  Aligned_cols=46  Identities=13%  Similarity=0.151  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      ++|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~h~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            1 GSSGSSGTGEKPYKCEKCGKGYNSKFN------------LDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCSEEETTTTEEESCHHH------------HHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCcCCCCCCCeECCCCCCccCCHHH------------HHHHHHhhCCCCCCCCCCC
Confidence            579999999999999999999999886            8889999999999999988

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.2e-10  Score=77.39  Aligned_cols=44  Identities=25%  Similarity=0.382  Sum_probs=39.9

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++|++.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTT-------------SCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            4778899999999999999999999999999999             6889999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.3e-10  Score=77.17  Aligned_cols=44  Identities=20%  Similarity=0.350  Sum_probs=40.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++|++.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTS-------------CSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            5788899999999999999999999999999999             6889999975

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.5e-10  Score=77.04  Aligned_cols=44  Identities=23%  Similarity=0.386  Sum_probs=39.7

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGT-------------SSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhc-------------CCCCCcCCCC
Confidence            4788899999999999999999999999999999             6889999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.97  E-value=9.3e-10  Score=87.00  Aligned_cols=63  Identities=10%  Similarity=0.184  Sum_probs=52.5

Q ss_pred             CcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCc--------cccccCCCcccChhhHHHHHHH-cCCCCeecc
Q 037502           95 KRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQ--------WVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD  164 (426)
Q Consensus        95 ~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~--------~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~  164 (426)
                      ...|.|..|+       +.|.....|..|++..|.++++        |.|.+|++.|.....|..|+++ ++++||.|+
T Consensus        23 ~~~~~C~~C~-------k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           23 QLSRPKKSCD-------RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CSSSSCCCCC-------CCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cCCCcccccc-------cccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3456788888       8999999999995333888887        8999999999999999999999 589999884

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.96  E-value=9.5e-11  Score=80.10  Aligned_cols=46  Identities=11%  Similarity=0.143  Sum_probs=43.2

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            1 GSSGSSGTGEKPYECKECGKAFSQTTH------------LIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSSCSCBCSSSCCBCSCHHH------------HHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCCccCCCCceECCCCCchhCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.96  E-value=1.6e-10  Score=86.77  Aligned_cols=63  Identities=22%  Similarity=0.426  Sum_probs=56.4

Q ss_pred             CCCCCCCCCCCCccccc--ccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc--CCcccCCchhHHHHhhhc
Q 037502            5 NSPSAIPCSSEPFSCLE--NGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI--CNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~--Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~--Cgk~F~~~~~L~~H~r~H   79 (426)
                      ..+...+...++|.|..  |++.|.....            |..|+++|+++++|+|.+  |++.|.....|..|+++|
T Consensus         6 ~~~~~~~~~~~~~~C~~~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A            6 SGPQIDSSRIRSHICSHPGCGKTYFKSSH------------LKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCCCCCEECSSTTTCCEESSHHH------------HHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCCCCCccccCceeCCCCCCccccCCHHH------------HHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45666778889999988  9999998886            889999999999999965  999999999999999886

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.7e-10  Score=77.06  Aligned_cols=43  Identities=23%  Similarity=0.328  Sum_probs=39.7

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      |+++|+++++|+|++|++.|....+|..|+++|             .++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH-------------TGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHC-------------SSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            678899999999999999999999999999999             6889999975

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.6e-10  Score=77.09  Aligned_cols=44  Identities=20%  Similarity=0.408  Sum_probs=39.7

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      ++++|+++++|+|++|++.|....+|..|+++|             .++++|.|++|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH-------------TGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTT-------------SSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            467889999999999999999999999999999             68899999886

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.6e-10  Score=77.06  Aligned_cols=44  Identities=18%  Similarity=0.386  Sum_probs=40.5

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHH-------------CCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            5788899999999999999999999999999999             6889999975

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=79.31  Aligned_cols=46  Identities=15%  Similarity=0.182  Sum_probs=42.8

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      .+|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            1 GSSGSSGTGGKHFECTECGKAFTRKST------------LSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSSSCCEECSSSCCEESCHHH------------HHHHGGGTSCSSCSCCCCC
T ss_pred             CccccccCCCCCeECCCCCchhCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            368999999999999999999999886            8899999999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=79.24  Aligned_cols=46  Identities=11%  Similarity=0.120  Sum_probs=43.0

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~F~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            1 GSSGSSGTGEKPYKCNECGKVFTQNSH------------LANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCSSEETTTTEECSSHHH------------HHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCCeECCCcChhhCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            578999999999999999999999886            8899999999999999988

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4e-10  Score=76.84  Aligned_cols=44  Identities=20%  Similarity=0.359  Sum_probs=39.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH-------------TGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTT-------------SCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            4778899999999999999999999999999999             6789999875

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.1e-10  Score=79.71  Aligned_cols=46  Identities=11%  Similarity=0.135  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            1 GSSGSSGTGEKPYKCNECGKVFTQNSH------------LARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSSEECSSSCCEESSSHH------------HHHHTHHHHSCCCSCSCCC
T ss_pred             CCcCcCCCCCCCeECCcCCchhCCHHH------------HHHHHHhcCCCCCCCCCCC
Confidence            579999999999999999999999886            8889999999999999988

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.2e-10  Score=75.01  Aligned_cols=42  Identities=19%  Similarity=0.324  Sum_probs=38.4

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP  101 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~  101 (426)
                      |+++|++++||+|++||+.|.....|..|+++|             .++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMH-------------TVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHT-------------SCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHh-------------CCCCCCCCC
Confidence            577899999999999999999999999999999             688999884

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.7e-10  Score=77.12  Aligned_cols=43  Identities=21%  Similarity=0.355  Sum_probs=38.5

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      |+++|+++++|+|++|++.|.....|..|+++|             .++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH-------------SGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTT-------------TSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhc-------------CCCCCCCCCC
Confidence            678889999999999999999999999999999             6788998875

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.5e-10  Score=78.92  Aligned_cols=46  Identities=11%  Similarity=0.164  Sum_probs=42.8

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            1 GSSGSSGTGEKPYKCNECGKAFSQTSK------------LARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSCCTTCCTTTCCCCSSHHH------------HHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCcCCCCCcCcCCCCCCCccCCHHH------------HHHHHHhcCCCCCCCCCCC
Confidence            479999999999999999999999886            8889999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.4e-10  Score=79.04  Aligned_cols=46  Identities=9%  Similarity=0.046  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|+.|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            1 GSSGSSGSGEKSHTCDECGKNFCYISA------------LRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSSEECTTTCCEESSHHH------------HHHHHTTTCCSCSSCCSCC
T ss_pred             CCccccCCCCCCeECCCcCcccCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            579999999999999999999999886            8889999999999999988

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.2e-10  Score=75.80  Aligned_cols=43  Identities=23%  Similarity=0.375  Sum_probs=39.5

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP  101 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~  101 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH-------------TGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHT-------------TTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHh-------------CCCCCCCCC
Confidence            5788999999999999999999999999999999             688999884

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1e-10  Score=79.89  Aligned_cols=46  Identities=13%  Similarity=0.178  Sum_probs=43.2

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            1 GSSGSSGTGENPYECHECGKAFSRKYQ------------LISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSCCEECSSSCCEESSHHH------------HHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCCcCcCCCCCCcccCcHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.4e-10  Score=76.62  Aligned_cols=44  Identities=20%  Similarity=0.308  Sum_probs=39.5

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTT-------------CCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            4778899999999999999999999999999999             6788999864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.4e-10  Score=75.72  Aligned_cols=43  Identities=23%  Similarity=0.354  Sum_probs=39.1

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP  101 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~  101 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH-------------TGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTT-------------CCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhc-------------CCCCCCCCC
Confidence            5788899999999999999999999999999999             688899884

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.6e-10  Score=76.58  Aligned_cols=44  Identities=18%  Similarity=0.319  Sum_probs=40.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++|++.|.....|..|+++|             .++++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHH-------------TSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHc-------------CCCCCCCCCC
Confidence            4778899999999999999999999999999999             6889999975

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.4e-10  Score=76.55  Aligned_cols=44  Identities=23%  Similarity=0.341  Sum_probs=39.7

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTT-------------SSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHc-------------CCCCCCCCCC
Confidence            4778899999999999999999999999999999             6789999874

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.8e-10  Score=76.44  Aligned_cols=44  Identities=23%  Similarity=0.346  Sum_probs=39.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH-------------RGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGG-------------CSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHh-------------CCCCCCCCCC
Confidence            4778899999999999999999999999999999             6788999865

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=79.19  Aligned_cols=46  Identities=15%  Similarity=0.204  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            1 GSSGSSGTGEKPYKCSDCGKSFTWKSR------------LRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCSCBCSSSCCBCSSHHH------------HHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCCccCCccChhhCCHHH------------HHHHHHhcCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=9.3e-11  Score=80.06  Aligned_cols=46  Identities=11%  Similarity=0.066  Sum_probs=43.2

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            1 GSSGSSGTGVKPYMCNECGKAFSVYSS------------LTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSSCCCSEECSSSCCEESCHHH------------HHHHHHHHHCCSCCSCCCC
T ss_pred             CCcccccCCCcCeECCCCCchhCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.8e-10  Score=78.62  Aligned_cols=45  Identities=11%  Similarity=0.170  Sum_probs=42.3

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIG------------LNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHH------------HHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            68999999999999999999999886            8889999999999999988

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=1.9e-10  Score=81.68  Aligned_cols=50  Identities=12%  Similarity=0.228  Sum_probs=44.9

Q ss_pred             CCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCcc-ccCCCCccccccCCcccCC
Q 037502            7 PSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPK-TLLESDRYVCEICNQGFQR   68 (426)
Q Consensus         7 ~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~-~h~~~~py~C~~Cgk~F~~   68 (426)
                      ....|++++||.|.+|++.|.....            |..|++ +|++++||+|++|++.|.+
T Consensus         3 ~~~~~~~~k~~~C~~C~k~f~~~~~------------L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            3 SGSSGSVGKPYICQSCGKGFSRPDH------------LNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHH------------HHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHH------------HHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4457889999999999999999886            888886 8999999999999999976

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.5e-10  Score=79.00  Aligned_cols=46  Identities=13%  Similarity=0.166  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            1 GSSGSSGTGEKPYECSICGKSFTKKSQ------------LHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSSCCCSEECSSSCCEESSHHH------------HHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCCcCcCCCCCCcccCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            478999999999999999999999886            8889999999999999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.94  E-value=2.1e-10  Score=78.22  Aligned_cols=45  Identities=9%  Similarity=0.104  Sum_probs=42.3

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      .|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASS------------LRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHH------------HHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHH------------HHHHHHHcCCCCCcCCCCC
Confidence            68999999999999999999999886            8899999999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.2e-10  Score=79.45  Aligned_cols=46  Identities=9%  Similarity=-0.043  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      |.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            1 GSSGSSGSREKSHQCRECGEIFFQYVS------------LIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCSCCSSCCCCEECTTTCCEESSHHH------------HHHHHHHHSCCSCCCTTCC
T ss_pred             CCcccccCCCCCEEccccChhhCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.4e-10  Score=79.14  Aligned_cols=46  Identities=15%  Similarity=0.150  Sum_probs=43.0

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            1 GSSGSSGTGEKPYICAECGKAFTIRSN------------LIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CCSSCTTSSCCSEECSSSCCEESSHHH------------HHHHHHHTSCCCCSSCSCC
T ss_pred             CCcccCCCCCcCeECCCCChhhCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999987

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.7e-10  Score=76.91  Aligned_cols=44  Identities=27%  Similarity=0.377  Sum_probs=40.2

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++|++.|....+|..|+++|             .++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHH-------------HSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhc-------------CCCCCCCCCC
Confidence            4778899999999999999999999999999999             6889999975

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=78.80  Aligned_cols=46  Identities=15%  Similarity=0.164  Sum_probs=42.7

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            1 GSSGSSGTGEKPYRCAECGKAFTDRSN------------LFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCCCSEECSSSCCEESSHHH------------HHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCCeECCCCCchhCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            579999999999999999999999886            8889999999999999976

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.8e-10  Score=78.56  Aligned_cols=46  Identities=13%  Similarity=0.188  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|+++++|+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            1 GSSGSSGTGEKPCKCTECGKAFCWKSQ------------LIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCCSEECSSSCCEESSSHH------------HHHHHHHCCSCCCSCCCCC
T ss_pred             CcCcccCCCCCCeeCCCCCCccCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            478999999999999999999999886            8899999999999999988

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4e-10  Score=76.92  Aligned_cols=44  Identities=20%  Similarity=0.273  Sum_probs=40.2

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      .+++|+++++|+|++|++.|....+|..|+++|             .++++|.|++|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH-------------TREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHH-------------HHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            367899999999999999999999999999999             68899999886

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.1e-10  Score=78.28  Aligned_cols=46  Identities=13%  Similarity=0.161  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            1 GSSGSSGSGEKPFKCEECGKRFTQNSQ------------LHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSTTCCCCCCSEEETTTTEEESSHHH------------HHHHGGGGSCCCCSCCCCC
T ss_pred             CCcccCCCCCCCeeCCCCCcccCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            478999999999999999999999886            8899999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.3e-10  Score=79.25  Aligned_cols=46  Identities=11%  Similarity=0.144  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            1 GSSGSSGSGEKPYKCSECGKAFHRHTH------------LNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCSEECSSSCCEESSHHH------------HHHHHHHHTCCCSSCSSCC
T ss_pred             CCCccccCCCcCeECCCCCCeeCChHH------------HHHHHHHcCCCCCCCCCCC
Confidence            479999999999999999999999886            8899999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1.5e-10  Score=78.96  Aligned_cols=46  Identities=13%  Similarity=0.122  Sum_probs=43.0

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~h~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            1 GSSGSSGSGEKPFKCEECGKGFYTNSQ------------CYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCSEECSSSCCEESSHHH------------HHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCCcCCCCCCCcCCChHH------------HHHHHHHhCCCCCCCCCCC
Confidence            478999999999999999999999886            8899999999999999988

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.8e-10  Score=74.70  Aligned_cols=42  Identities=21%  Similarity=0.309  Sum_probs=36.7

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVC  100 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C  100 (426)
                      .|+++|++++||+|++||+.|....+|..|+++|             .++++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH-------------TGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGT-------------SCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHh-------------CCCCCCCC
Confidence            3678888999999999999999999999999998             67888877

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.4e-10  Score=75.77  Aligned_cols=43  Identities=21%  Similarity=0.294  Sum_probs=38.0

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP  101 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~  101 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH-------------SGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTS-------------SSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHc-------------CCCCCCCCC
Confidence            4778889999999999999999999999999999             678888884

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.5e-10  Score=76.20  Aligned_cols=44  Identities=20%  Similarity=0.312  Sum_probs=39.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCcccc-CcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVR-KRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~-~k~~~C~~  102 (426)
                      .|+++|++++||+|++||+.|....+|..|+++|             .+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIH-------------TRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTC-------------CSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHc-------------CCCCCCCCCCC
Confidence            4778899999999999999999999999999999             67 88999864

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.6e-10  Score=78.90  Aligned_cols=46  Identities=17%  Similarity=0.128  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            1 GSSGSSGTGEKPFKCDICGKSFCGRSR------------LNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSSCSCCCSSSCCCCSSHHH------------HHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCCcCCCcCCchhCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            478999999999999999999999886            8899999999999999988

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.9e-10  Score=75.20  Aligned_cols=43  Identities=23%  Similarity=0.344  Sum_probs=39.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP  101 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~  101 (426)
                      .|+++|++++||+|++|++.|....+|..|+++|             .++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH-------------ARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHC-------------CCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhc-------------CCCCCCCCC
Confidence            4788899999999999999999999999999999             678899884

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.3e-10  Score=79.33  Aligned_cols=46  Identities=11%  Similarity=0.101  Sum_probs=43.0

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            1 GSSGSSGSGEKPYKCNECGKVFTQNSH------------LTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSSCSEECSSSCCEESSHHH------------HHHHHHHHSSSSCSSCCCC
T ss_pred             CCCcccCCCCCCEeCCcCCCccCCHHH------------HHHHHHHHCCCCCCCCCCC
Confidence            478999999999999999999999886            8899999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.1e-10  Score=79.67  Aligned_cols=46  Identities=13%  Similarity=0.108  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            1 GSSGSSGTGERPYICTVCGKAFTDRSN------------LIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCSCCCSEECTTTCCEESSHHH------------HHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCCcCCCCCCchhCCHHH------------HHHHHHhcCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=7.6e-10  Score=75.48  Aligned_cols=43  Identities=21%  Similarity=0.405  Sum_probs=38.1

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      |+++|+++++|+|++|++.|....+|..|+++|             .++++|.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH-------------SGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGS-------------CCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            677889999999999999999999999999999             6788998864

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.92  E-value=5.4e-11  Score=87.22  Aligned_cols=56  Identities=9%  Similarity=0.162  Sum_probs=48.6

Q ss_pred             CCCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHH
Q 037502            4 NNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQM   74 (426)
Q Consensus         4 ~~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~   74 (426)
                      +..|+++|++++||.|.+||+.|.....            |.   ++|++++||+|++||+.|....++..
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~------------l~---~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEA------------NQ---LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHH------------HH---HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHH------------hH---hhcCCCCCEECCCCCCccccCccccc
Confidence            4679999999999999999999988664            43   78999999999999999988777643

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.7e-10  Score=76.57  Aligned_cols=44  Identities=20%  Similarity=0.352  Sum_probs=40.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++||+.|.....|..|+++|             .++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH-------------TQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHH-------------SSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            5788999999999999999999999999999999             6889999864

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.4e-10  Score=79.38  Aligned_cols=46  Identities=11%  Similarity=0.161  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      ++|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 g~h~~~h~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            1 GSSGSSGTGEKPYKCMECGKAFGDNSS------------CTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCSSSBTTTTBCCSSHHH------------HHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCcCCCCCCCcCCCCCCchhCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            479999999999999999999999886            8899999999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=5.7e-10  Score=75.76  Aligned_cols=43  Identities=21%  Similarity=0.384  Sum_probs=39.5

Q ss_pred             cccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCC
Q 037502           49 KTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPS  104 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~  104 (426)
                      .+|++++||+|++|++.|....+|..|+++|             .++++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H-------------~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSH-------------DGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHH-------------SCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHc-------------cCCCCCCCcCCC
Confidence            4688999999999999999999999999999             689999999986

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=5e-10  Score=76.43  Aligned_cols=44  Identities=23%  Similarity=0.387  Sum_probs=39.5

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|++++||+|++|++.|.....|..|+++|             .++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH-------------TGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHH-------------TCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHc-------------CCCCCCCCCC
Confidence            5788899999999999999999999999999999             6788998863

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.3e-10  Score=79.36  Aligned_cols=46  Identities=13%  Similarity=0.162  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|+++++|+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNECGKNFGRHSH------------LIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCCCEECSSSCCEESSHHH------------HHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCCEEccccCcccCCHHH------------HHHHHHHHcCCCCCCCCCC
Confidence            479999999999999999999999886            8899999999999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.7e-10  Score=77.65  Aligned_cols=45  Identities=13%  Similarity=0.121  Sum_probs=42.2

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      .|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQ------------LIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHH------------HHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999886            8889999999999999988

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=6.5e-10  Score=75.01  Aligned_cols=43  Identities=23%  Similarity=0.335  Sum_probs=38.7

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP  101 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~  101 (426)
                      .|+++|+++++|+|++||+.|....+|..|+++|             .++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTH-------------AAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGG-------------CCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHc-------------CCCCCcCCC
Confidence            4788899999999999999999999999999999             678888884

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.5e-10  Score=79.03  Aligned_cols=46  Identities=15%  Similarity=0.195  Sum_probs=43.1

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~h~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            1 GSSGSSGSGEKPYGCNECGKTFSQKSI------------LSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSSCCEEETTTTEEESSHHH------------HHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCCccCCCcCeECCCCCcccCchHH------------HHHHHHHcCCCCCCCCCCC
Confidence            579999999999999999999999886            8899999999999999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.2e-10  Score=75.81  Aligned_cols=44  Identities=20%  Similarity=0.290  Sum_probs=40.0

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|.|++||+.|.....|..|+++|             .++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH-------------TGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTS-------------CCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            5788999999999999999999999999999999             6889999864

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.5e-10  Score=76.21  Aligned_cols=44  Identities=25%  Similarity=0.360  Sum_probs=40.4

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      .|+++|+++++|+|++|++.|....+|..|+++|             .++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH-------------SREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHH-------------HHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHh-------------CCCCCCCCCC
Confidence            4788999999999999999999999999999999             6889999975

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.90  E-value=2.6e-10  Score=77.88  Aligned_cols=45  Identities=11%  Similarity=0.122  Sum_probs=42.3

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLR------------LLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHH------------HHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999886            8899999999999999988

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=6.8e-10  Score=74.12  Aligned_cols=41  Identities=29%  Similarity=0.379  Sum_probs=37.0

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVC  100 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C  100 (426)
                      |+++|++++||+|++||+.|.....|..|+++|             .++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH-------------TGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTT-------------SCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhc-------------CCCCCCCC
Confidence            678899999999999999999999999999999             67888877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=3e-10  Score=77.52  Aligned_cols=45  Identities=11%  Similarity=0.081  Sum_probs=42.2

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      .|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSH------------LNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHH------------HHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            68999999999999999999999886            8889999999999999988

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.9e-10  Score=75.97  Aligned_cols=43  Identities=21%  Similarity=0.228  Sum_probs=39.7

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP  101 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~  101 (426)
                      .|+++|++++||+|++|++.|....+|..|+++|             .++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH-------------ERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHH-------------HHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHh-------------CCCCCCCCC
Confidence            5788999999999999999999999999999999             688999985

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.89  E-value=8.1e-10  Score=73.58  Aligned_cols=41  Identities=20%  Similarity=0.354  Sum_probs=37.9

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVC  100 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C  100 (426)
                      |+++|+++++|+|++||+.|....+|..|+++|             .++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H-------------~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC-------------SQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHT-------------TCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhc-------------CCCCCCCC
Confidence            678899999999999999999999999999999             67888887

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.5e-10  Score=77.97  Aligned_cols=46  Identities=13%  Similarity=0.142  Sum_probs=42.8

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      ++|+++|++++||.|.+|++.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            1 GSSGSSGSGEKPFKCKECGKAFRQNIH------------LASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCSEECSSSCCEESSHHH------------HHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCCEECCcCCchhCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            479999999999999999999999886            8899999999999999976

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.2e-10  Score=74.25  Aligned_cols=41  Identities=22%  Similarity=0.267  Sum_probs=37.5

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVC  100 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C  100 (426)
                      |+++|++++||+|++||+.|.....|..|+++|             .++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH-------------TGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHH-------------HSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHc-------------CCCCCCCC
Confidence            678899999999999999999999999999999             67888887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=2.2e-10  Score=78.24  Aligned_cols=46  Identities=13%  Similarity=0.209  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      .+|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++|
T Consensus         1 ~~h~~~h~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            1 GSSGSSGSGEKPYKCVECGKGYKRRLD------------LDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCSEECSSSCCEESSHHH------------HHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCCeECcccCchhCCHHH------------HHHHHHHHcCCCCCCCCCC
Confidence            468999999999999999999999886            8899999999999999988

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.5e-10  Score=76.83  Aligned_cols=45  Identities=11%  Similarity=0.096  Sum_probs=42.0

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCcc-ccCCCCccccccC
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPK-TLLESDRYVCEIC   62 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~-~h~~~~py~C~~C   62 (426)
                      +|+++|++++||.|.+||+.|.....            |..|++ +|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTS------------LIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHH------------HHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHH------------HHHHhHhhcCCCCCCCCCCC
Confidence            68999999999999999999999886            888888 9999999999988

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.5e-10  Score=74.40  Aligned_cols=43  Identities=28%  Similarity=0.385  Sum_probs=38.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP  101 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~  101 (426)
                      .|+++|++++||+|++||+.|.....|..|+++|             .++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH-------------TRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHH-------------CCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHh-------------CCCCCCCCC
Confidence            4778899999999999999999999999999999             678888873

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.2e-09  Score=73.72  Aligned_cols=42  Identities=17%  Similarity=0.162  Sum_probs=38.6

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCP  101 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~  101 (426)
                      |+++|+++++|.|++||+.|....+|..|+++|             .++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALH-------------AGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHH-------------TTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHH-------------CCCCCCCCC
Confidence            678899999999999999999999999999999             688999884

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.6e-09  Score=80.00  Aligned_cols=58  Identities=19%  Similarity=0.360  Sum_probs=52.9

Q ss_pred             hCCCCccccccCCCcccChhhHHHHHHHcCCCCeecc--CCcccCChhhHHHHHHHhcCCC
Q 037502          128 HSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCD--CGRVFSRVESFIEHQDACSKGH  186 (426)
Q Consensus       128 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~kp~~C~--Cgk~F~~~~~L~~H~r~h~~~~  186 (426)
                      ..++++|+|..|++.|. ...|..|+++++++||.|+  ||+.|...+.|..|+++|....
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            45789999999999999 9999999998999999996  9999999999999999986543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=1.4e-09  Score=77.04  Aligned_cols=48  Identities=23%  Similarity=0.450  Sum_probs=42.5

Q ss_pred             cccCCCCccccccCCcccCCchhHHHHhh-hccCccccccccCccccCcceeCCCCCCCCCCcccccCC
Q 037502           49 KTLLESDRYVCEICNQGFQRDQNLQMHRR-RHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGD  116 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~  116 (426)
                      ..|+++++|+|++|++.|.....|..|++ +|             .++++|.|.+|+       +.|..
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H-------------~~~k~~~C~~C~-------k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH-------------TSERPHKCQVWV-------SGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTS-------------CCCCCCCSSSSC-------CSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhc-------------CCCCCccCCCCC-------CCCCC
Confidence            45788999999999999999999999997 88             678999999988       77764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=2.8e-10  Score=89.80  Aligned_cols=48  Identities=19%  Similarity=0.302  Sum_probs=43.7

Q ss_pred             hccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCC
Q 037502           44 VSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPS  104 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~  104 (426)
                      +..+.++|++++||+|++|++.|....+|..|+++|             .++++|+|..|.
T Consensus        13 ~~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~H-------------t~ekp~~C~~~~   60 (88)
T 1x6f_A           13 IILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIH-------------NEEFQKRAKRQE   60 (88)
T ss_dssp             CCCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHH-------------HHHHHHHCCCCS
T ss_pred             eeccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHh-------------CCCCCcccchhh
Confidence            566778899999999999999999999999999999             789999998876

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7e-10  Score=75.60  Aligned_cols=45  Identities=16%  Similarity=0.178  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      ++|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            1 GSSGSSGTGENPFICSECGKVFTHKTN------------LIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCSCBCTTTCCBCSSHHH------------HHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCCEECCccCcccCCHHH------------HHHHHHHhCCCCCCCCCC
Confidence            579999999999999999999999886            888999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.5e-09  Score=73.64  Aligned_cols=43  Identities=21%  Similarity=0.352  Sum_probs=38.2

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      +.++|+++++|+|++|++.|....+|..|+++|             .++++|.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH-------------TGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTT-------------SSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHh-------------CCCCCCCCCC
Confidence            457789999999999999999999999999999             6889999864

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.9e-09  Score=73.51  Aligned_cols=43  Identities=21%  Similarity=0.212  Sum_probs=39.0

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      ++++|+++++|+|++|++.|....+|..|+++|             .++++|.|.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH-------------TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHH-------------SSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHh-------------CCCCCCCCCC
Confidence            467889999999999999999999999999999             6889999964

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.9e-09  Score=73.94  Aligned_cols=44  Identities=23%  Similarity=0.310  Sum_probs=39.7

Q ss_pred             CccccCCCCccccc--cCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCC
Q 037502           47 SPKTLLESDRYVCE--ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEP  103 (426)
Q Consensus        47 h~~~h~~~~py~C~--~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C  103 (426)
                      |.++|+++++|+|+  .|++.|.....|..|+++|             .++++|+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH-------------SGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTS-------------CCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHh-------------CCCCCCCCCCC
Confidence            56788999999998  8999999999999999999             68899999886

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=7.7e-10  Score=75.40  Aligned_cols=45  Identities=11%  Similarity=0.189  Sum_probs=41.7

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            1 GSSGSSGTGGKPYQCNECGKAFSQTSK------------LARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSSCSSSCCSSCCCCSSHHH------------HHHHGGGGCCCCCCCCCC
T ss_pred             CCcccccCCCCCeECCCCCcccCCHHH------------HHHHHHHcCCCCCCCCCC
Confidence            579999999999999999999999886            889999999999999975

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=6.4e-10  Score=75.79  Aligned_cols=45  Identities=11%  Similarity=0.130  Sum_probs=41.7

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      ++|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            1 GSSGSSGTGERHYECSECGKAFIQKST------------LSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCSSCCCEECSSSCCEESSHHH------------HHHHHGGGCSCCCCSCCC
T ss_pred             CCCCcccCCCCCCCCCCCCcccCCHHH------------HHHHHhHhCCCCCCCCCC
Confidence            579999999999999999999999886            889999999999999974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.1e-09  Score=72.58  Aligned_cols=42  Identities=21%  Similarity=0.264  Sum_probs=37.8

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeC
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVC  100 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C  100 (426)
                      .|+++|+++++|+|++|++.|.....|..|+++|             .++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-------------~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH-------------AGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGG-------------SSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHh-------------cCCCCCCC
Confidence            4788899999999999999999999999999999             67888876

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=6.2e-10  Score=75.02  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=41.0

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE   60 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~   60 (426)
                      |.|+++|++++||.|.+||+.|.....            |..|+++|+++++|+|+
T Consensus         1 n~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            1 GSSGSSGTGENPYECCECGKVFSRKDQ------------LVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CCSCCSSSSCCSCEETTTTEECSSHHH------------HHHHHTTSSSSCSCCCC
T ss_pred             CCCccccCCCcCeeCCCCCCccCCHHH------------HHHHHHHcCCCCCCCCC
Confidence            689999999999999999999999886            88899999999999995

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.82  E-value=5.5e-10  Score=81.74  Aligned_cols=53  Identities=11%  Similarity=0.204  Sum_probs=45.5

Q ss_pred             hccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHH
Q 037502           44 VSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVG  119 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~  119 (426)
                      |..|+++|++++||+|++||+.|.....|.   ++|             .++++|.|++|+       +.|....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H-------------~~~k~~~C~~C~-------k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFD-------------PMTGTFRCTFCH-------TEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEE-------------TTTTEEBCSSSC-------CBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhc-------------CCCCCEECCCCC-------CccccCcc
Confidence            567889999999999999999999988886   788             688999999988       77776544

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.82  E-value=1.3e-09  Score=77.10  Aligned_cols=36  Identities=17%  Similarity=0.278  Sum_probs=34.7

Q ss_pred             hccCccccCCCCccccccCCcccCCchhHHHHhhhc
Q 037502           44 VSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |..|+++|+++++|.|++||+.|....+|..|+++|
T Consensus        12 l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   47 (54)
T 1yui_A           12 TEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             CCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             hhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHh
Confidence            778889999999999999999999999999999999

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.7e-10  Score=74.88  Aligned_cols=45  Identities=11%  Similarity=0.103  Sum_probs=41.4

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            1 GSSGSSGTGEKPYKCNECGKVFTQNSH------------LVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCSCBCSSSCCBCSSHHH------------HHHHHTTTTTSSCCCCSC
T ss_pred             CCCCcCCCCCcCeECCCCCcccCCHHH------------HHHHHHhhCCCCCCCCCC
Confidence            478999999999999999999999886            888999999999999975

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=7.6e-10  Score=75.41  Aligned_cols=45  Identities=9%  Similarity=0.039  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      +++++|++++||.|.+|++.|.....            |..|+++|++++||+|++|
T Consensus         2 s~~~~h~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            2 SSGSSGTGEKPYKCDVCHKSFRYGSS------------LTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSTTCCSEECSSSCCEESSHHH------------HHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCCeeCcccCcccCChHH------------HHHHHHHhCCCCCCCCCCC
Confidence            46889999999999999999999886            8889999999999999988

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.7e-10  Score=74.81  Aligned_cols=45  Identities=13%  Similarity=0.148  Sum_probs=41.5

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            1 GSSGSSGTGEKPYICNECGKSFIQKSH------------LNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSCCSEECSSSCCEESSHHH------------HHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCCcCEECCCCChhhCChHH------------HHHHHHhcCCCCCcCCCC
Confidence            478999999999999999999999886            889999999999999975

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8.6e-10  Score=75.14  Aligned_cols=45  Identities=11%  Similarity=0.129  Sum_probs=41.5

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            1 GSSGSSGTGEKPYKCNECGKAFRAHSN------------LTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCCCCCTTTTCCCSSHHH------------HHHHHTTTCCSCCSSCCC
T ss_pred             CCcccccCCCCCeECCcCChhhCCHHH------------HHHHHHHhCCCCCCCCCC
Confidence            579999999999999999999999886            888999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8.3e-10  Score=75.30  Aligned_cols=45  Identities=9%  Similarity=0.135  Sum_probs=41.5

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      ++|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            1 GSSGSSGTGERHYECSECGKAFARKST------------LIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCCEECSSSCCEESSHHH------------HHHHHTTTSCCCCCSSCC
T ss_pred             CCcccCcCCCCCeECCcCCcccCCHHH------------HHHHHHHhCCCCCCCCCC
Confidence            479999999999999999999999886            888999999999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=2.3e-09  Score=73.90  Aligned_cols=42  Identities=21%  Similarity=0.386  Sum_probs=37.2

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCC
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPS  104 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~  104 (426)
                      .|.++++|+|++|++.|.....|..|+++|             .++++|.|++|+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~C~   47 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSH-------------SGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGS-------------CSCCCCCSCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhc-------------CCCCCccCCCCC
Confidence            467788999999999999999999999999             678899999987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.81  E-value=2.3e-09  Score=72.00  Aligned_cols=41  Identities=12%  Similarity=0.261  Sum_probs=37.5

Q ss_pred             cccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           49 KTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      ++|+++++|+|+.|++.|....+|..|+++|             .++++|.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQT-------------HSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHH-------------TCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhh-------------CCCCCccCCC
Confidence            5788999999999999999999999999999             6889999864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=6.2e-10  Score=75.92  Aligned_cols=45  Identities=11%  Similarity=0.203  Sum_probs=41.7

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      ++|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            1 GSSGSSGTGQRPYECIECGKAFKTKSS------------LICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCSSSEECSSSCCEESSHHH------------HHHHHHHHSSSSCCCCCC
T ss_pred             CCCccccCCCcCcCCCCCCCccCCHHH------------HHHHHHhcCCCCCCCCCC
Confidence            479999999999999999999999886            889999999999999974

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.80  E-value=5.1e-09  Score=78.43  Aligned_cols=54  Identities=17%  Similarity=0.400  Sum_probs=33.2

Q ss_pred             ccCCCCcccccc--CCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC--CCCCCCCcccccCCHHHHHHH
Q 037502           50 TLLESDRYVCEI--CNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE--PSCLHHDPCHALGDLVGIKKH  123 (426)
Q Consensus        50 ~h~~~~py~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~--C~c~~~~~~~~f~~~~~l~~H  123 (426)
                      .+...++|.|..  |++.|.....|..|+++|             .++++|.|.+  |+       +.|.....|..|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H-------------~~~~~~~C~~~~C~-------k~f~~~~~l~~H   68 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH-------------TGEKPFSCSWKGCE-------RRFARSDELSRH   68 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHH-------------SSSCSEECCCTTCC-------CEESSHHHHHHH
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhc-------------CCCCCccCCCCCCC-------cccCCHHHHHhH
Confidence            344556666666  666666666666666666             4556666644  55       666666666666

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.2e-09  Score=74.45  Aligned_cols=45  Identities=13%  Similarity=0.174  Sum_probs=41.5

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            1 GSSGSSGSGEKPFQCEECGKRFTQNSH------------LHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCSSSBCCSSSCCCBSSHHH------------HHHHGGGGTTCCCSSCCC
T ss_pred             CCcccCCCCCcCCCCCCCCcccCCHHH------------HHHHHHhcCCCCCCCCCC
Confidence            478999999999999999999999886            888999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.6e-09  Score=73.87  Aligned_cols=45  Identities=7%  Similarity=0.059  Sum_probs=41.3

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      ++|+++|++++||.|.+|++.|.....            |..|+++|++++||+|+.
T Consensus         1 ~~h~~~h~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            1 GSSGSSGTGEKPYECDVCRKAFSHHAS------------LTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSSCBCTTTCCBCSSSHH------------HHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCCcCCCCCcCCCCcCchhCCHHH------------HHHHHHHhCCCCCCCCCC
Confidence            478999999999999999999999886            888999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.1e-09  Score=74.61  Aligned_cols=45  Identities=11%  Similarity=0.118  Sum_probs=41.3

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            1 GSSGSSGTGEKPYKCNECGKVFTQNSH------------LARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCTTCCSSSCCCCSSHHH------------HHHHHTTTSCSCCSSTTC
T ss_pred             CCCCcCCCCCcCeECCCCCcccCChhH------------HHHHhHhcCCCCCCCCCC
Confidence            468999999999999999999999886            888999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.1e-09  Score=74.53  Aligned_cols=45  Identities=11%  Similarity=0.168  Sum_probs=41.4

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            1 GSSGSSGTGEKPYRCGECGKAFAQKAN------------LTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCCEECSSSCCEESSHHH------------HHHHHTTTSSCCSSCSCC
T ss_pred             CCCccCCCCCCCeECCCCCCccCCHHH------------HHHHHHHcCCCCCCCCCC
Confidence            478999999999999999999999886            888999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.5e-09  Score=74.07  Aligned_cols=44  Identities=9%  Similarity=0.062  Sum_probs=40.7

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +|+++|++++||.|.+|++.|.....            |..|+++|++++||+|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSH------------LVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHH------------HHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHH------------HHHHHHhcCCCCCCCCCC
Confidence            68999999999999999999999886            888889999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=9.9e-10  Score=74.76  Aligned_cols=45  Identities=16%  Similarity=0.193  Sum_probs=41.5

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+|++.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            1 GSSGSSGTGEKPFECSECQKAFNTKSN------------LIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCSEECSSSCCEESSHHH------------HHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCCcCCCCCCcccCCHHH------------HHHHHHHhCCCCCCCCCC
Confidence            578999999999999999999999886            888999999999999975

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=9.3e-10  Score=74.90  Aligned_cols=45  Identities=16%  Similarity=0.209  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            1 GSSGSSGTGEKPYKCNECGKAFRARSS------------LAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCCEECTTSCCEESSHHH------------HHHHHHHHCCCSCSCTTC
T ss_pred             CCccCCCCCCCCeeccccCChhcCHHH------------HHHHHHHcCCCCCCCCCC
Confidence            468999999999999999999999886            889999999999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=1.5e-09  Score=74.83  Aligned_cols=45  Identities=7%  Similarity=0.011  Sum_probs=40.7

Q ss_pred             CCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCc
Q 037502            8 SAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQ   64 (426)
Q Consensus         8 ~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk   64 (426)
                      ...+.++++|.|.+|++.|.....            |..|+++|++++||+|++|||
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            4 GSSGRTRKQVACEICGKIFRDVYH------------LNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSCCCCCCSEEETTTTEEESSHHH------------HHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCCcCeeCCCCCcccCCHHH------------HHHHHHhcCCCCCccCCCCCC
Confidence            346788999999999999999886            889999999999999999996

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.3e-09  Score=72.08  Aligned_cols=39  Identities=18%  Similarity=0.187  Sum_probs=24.5

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccC
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC  139 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C  139 (426)
                      .++++|.|++|+       +.|.....|..| +++|+++++|.|++|
T Consensus         8 ~~~k~~~C~~C~-------k~f~~~~~L~~H-~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            8 TGERPHKCNECG-------KSFIQSAHLIQH-QRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSC-------CEESSHHHHHHH-HHHHSCCCTTSSSCC
T ss_pred             CCCCCeeCCCCC-------hhhCCHHHHHHH-HHHhCCCCCCCCCCC
Confidence            456666666666       666666666666 355666666666655

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=7.5e-10  Score=75.39  Aligned_cols=45  Identities=11%  Similarity=0.135  Sum_probs=41.7

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~------------L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            1 GSSGSSGTGEKPYNCEECGKAFIHDSQ------------LQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSSSCCCSEECTTTCCEESSHHH------------HHHHHHHHHSCCCSSSTT
T ss_pred             CCCCcCcCCCcCccCCCCCCCcCCHHH------------HHHHHHhcCCCCCCCCCC
Confidence            579999999999999999999999886            889999999999999975

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1e-09  Score=74.85  Aligned_cols=45  Identities=9%  Similarity=0.084  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+|++.|.....            |..|+++|++++||+|++
T Consensus         1 ~~h~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            1 GSSGSSGAGKKLFKCNECKKTFTQSSS------------LTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSSCCCBCTTTCCBCSSHHH------------HHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCCEECCccCcccCCHHH------------HHHHHHHcCCCCCCCCCC
Confidence            578999999999999999999999886            889999999999999975

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.2e-09  Score=72.18  Aligned_cols=39  Identities=21%  Similarity=0.273  Sum_probs=20.7

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccC
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC  139 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C  139 (426)
                      .++++|.|++|+       +.|.....|..| +++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C~-------k~f~~~~~L~~H-~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            8 TGEKLYNCKECG-------KSFSRAPCLLKH-ERLHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCBTTTT-------BCCSCHHHHHHH-HHHCCSSSCCCCCCC
T ss_pred             CCCCCeECCCCC-------CccCchHHHHHH-HHhcCCCCCCCCCCC
Confidence            445555555555       555555555555 345555555555544

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.4e-09  Score=71.19  Aligned_cols=42  Identities=12%  Similarity=0.203  Sum_probs=38.9

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccc
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC   59 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C   59 (426)
                      .|+++|++++||.|.+||+.|.....            |..|+++|++++||+|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGS------------LIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHH------------HHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHH------------HHHHHHHhCCCCCCCC
Confidence            48899999999999999999999886            8888899999999998

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.4e-09  Score=73.12  Aligned_cols=44  Identities=14%  Similarity=0.218  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE   60 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~   60 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||+|+
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            1 GSSGSSGTGMKPYVCNECGKAFRSKSY------------LIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CCSCCCSSSSSSSCCTTTCCCCSSHHH------------HHHHHTTTCCSSSSCCC
T ss_pred             CCCCcCCCCCcCeECCCCCCccCCHHH------------HHHHhhhcCCCCCCCCC
Confidence            478999999999999999999999886            88899999999999995

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.9e-09  Score=69.93  Aligned_cols=39  Identities=21%  Similarity=0.382  Sum_probs=35.6

Q ss_pred             cccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeC
Q 037502           49 KTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVC  100 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C  100 (426)
                      ++|+++++|+|++||+.|....+|..|+++|             .++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIH-------------TGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGC-------------CCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHh-------------CCCCCcCC
Confidence            5788999999999999999999999999999             67888887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=4e-09  Score=71.02  Aligned_cols=39  Identities=15%  Similarity=0.145  Sum_probs=21.6

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccC
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC  139 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C  139 (426)
                      .++++|.|.+|+       +.|.....|..| +++|+++++|.|++|
T Consensus         6 ~~~k~~~C~~C~-------k~f~~~~~L~~H-~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            6 SGEKPFGCSCCE-------KAFSSKSYLLVH-QQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SSCCCEECSSSS-------CEESSHHHHHHH-HHHHTSSCSCSCCCC
T ss_pred             CCCcCccCCCCC-------cccCCHHHHHHH-HHHhCCCCCCCCCCC
Confidence            445555555555       555555555555 345555555555554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.1e-09  Score=74.60  Aligned_cols=45  Identities=9%  Similarity=0.221  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      +.|+++|++++||.|.+|++.|.....            |..|+++|++++||+|+.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            1 GSSGSSGTGEKPYKCSDCGKAFTRKSG------------LHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCEECSSSCCEESSHHH------------HHHHHHHHTCCCBTTTBC
T ss_pred             CCcccccCCCCCEECcccCCccCCHhH------------HHHHHHHcCCCCCCCCCC
Confidence            579999999999999999999999886            889999999999999973

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=4.6e-09  Score=71.34  Aligned_cols=39  Identities=21%  Similarity=0.280  Sum_probs=24.9

Q ss_pred             ccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccC
Q 037502           93 VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC  139 (426)
Q Consensus        93 ~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C  139 (426)
                      .++++|.|++|+       +.|.....|..| +++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C~-------k~f~~~~~L~~H-~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            8 SGEKPYVCDYCG-------KAFGLSAELVRH-QRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSC-------CEESSHHHHHHH-HGGGCCCSCCSSCCC
T ss_pred             CCCCCeECCCCC-------hhhCCHHHHHHH-HHhcCCCCCCCCCCC
Confidence            456666666666       666666666666 356666666666655

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.9e-09  Score=73.34  Aligned_cols=44  Identities=14%  Similarity=0.223  Sum_probs=40.9

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      .|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQ------------LHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHH------------HHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHH------------HHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999886            888999999999999975

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=9.6e-10  Score=74.97  Aligned_cols=45  Identities=18%  Similarity=0.109  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      ..+++|++++||.|.+|++.|.....            |..|+++|++++||+|++|
T Consensus         2 ~~~~~h~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            2 SSGSSGEGEKPYQCSECGKSFSGSYR------------LTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSCCCTTCCSSSCCCCSSHHH------------HHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCCeeCCCCCcccCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            56789999999999999999999886            8889999999999999988

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2e-09  Score=73.36  Aligned_cols=44  Identities=7%  Similarity=0.032  Sum_probs=40.6

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      .|+++|++++||.|.+||+.|.....            |..|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSH------------LQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHH------------HHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHH------------HHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999886            888999999999999974

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.1e-09  Score=73.23  Aligned_cols=44  Identities=9%  Similarity=-0.004  Sum_probs=40.6

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCC-CCcccccc
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLE-SDRYVCEI   61 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~-~~py~C~~   61 (426)
                      +|+++|++++||.|.+||+.|.....            |..|+++|++ ++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKY------------LTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHH------------HHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHH------------HHHHHHHcCCCCCCCCCCC
Confidence            68999999999999999999999886            8889999999 99999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=4.6e-09  Score=69.83  Aligned_cols=40  Identities=20%  Similarity=0.380  Sum_probs=34.6

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD  164 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~  164 (426)
                      +++|+++++|.|++|++.|...+.|..|+++ ++++||.|+
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3678899999999999999999999999998 588898884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=2.7e-09  Score=71.85  Aligned_cols=44  Identities=16%  Similarity=0.159  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE   60 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~   60 (426)
                      ..|+++|++++||.|.+||+.|.....            |..|+++|++++||+|+
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            1 GSSGSSGHTRKRYECSKCQATFNLRKH------------LIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCCSCCCCCSSEECTTTCCEESCHHH------------HHHHGGGGCCCCCTTCC
T ss_pred             CCcccccCCCCCeECCCCCCccCCHHH------------HHHHHHHcCCCCCcCCC
Confidence            368999999999999999999999886            88999999999999995

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=7.5e-09  Score=70.41  Aligned_cols=40  Identities=20%  Similarity=0.424  Sum_probs=35.1

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD  164 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~  164 (426)
                      +++|+++++|+|.+|++.|.....|..|+++ +++++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4678899999999999999999999999998 588999885

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=4.5e-09  Score=71.52  Aligned_cols=41  Identities=20%  Similarity=0.482  Sum_probs=36.4

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeeccC
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCDC  165 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~C  165 (426)
                      +++|+++++|.|.+|++.|.....|..|+++ +++++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4678999999999999999999999999999 5899999863

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=3.7e-09  Score=71.84  Aligned_cols=44  Identities=11%  Similarity=0.146  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      .|+++|++++||.|.+||+.|.....            |..|+++|++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSS------------LTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHH------------HHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHH------------HHHHHHHhCCCCCCCCCC
Confidence            68999999999999999999999886            888999999999999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=4.3e-09  Score=70.09  Aligned_cols=42  Identities=12%  Similarity=0.135  Sum_probs=38.7

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccc
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVC   59 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C   59 (426)
                      .|+++|++++||.|.+||+.|.....            |..|+++|++++||+|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~------------L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            1 GSSGSSGGEKPYPCEICGTRFRHLQT------------LKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSSSCCBCCSSSCCCBSSHHH------------HHHHTTTTSCCSSTTC
T ss_pred             CCCcccCCCCCEECCCCCCccCCHHH------------HHHHHHhcCCCCCCCC
Confidence            37889999999999999999999886            8888899999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=1e-08  Score=69.37  Aligned_cols=40  Identities=23%  Similarity=0.470  Sum_probs=24.1

Q ss_pred             hhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CC
Q 037502          127 KHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CG  166 (426)
Q Consensus       127 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cg  166 (426)
                      .|+++++|.|.+|++.|.....|..|+++ +++++|.|. ||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            35566666666666666666666666666 356666664 54

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=4.2e-09  Score=72.20  Aligned_cols=45  Identities=13%  Similarity=0.157  Sum_probs=41.4

Q ss_pred             CCCCCCCCCCCcccc--cccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccC
Q 037502            6 SPSAIPCSSEPFSCL--ENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC   62 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~--~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~C   62 (426)
                      .|.++|++++||.|.  .||+.|.....            |..|+++|++++||+|++|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~------------L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDE------------LSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHH------------HHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHH------------HHHHHHHhCCCCCCCCCCC
Confidence            578899999999998  89999999886            8889999999999999988

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.66  E-value=7.4e-09  Score=68.78  Aligned_cols=39  Identities=13%  Similarity=0.397  Sum_probs=33.8

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      +++|+++++|.|++|++.|.....|..|+++ ++++||.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            4678889999999999999999999999988 58888887

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=5.2e-09  Score=70.45  Aligned_cols=43  Identities=14%  Similarity=0.155  Sum_probs=39.8

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccc
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE   60 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~   60 (426)
                      .|+++|++++||.|.+||+.|.....            |..|+++|++++||+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~------------L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFH------------LTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHH------------HHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHH------------HHHHHHHhCCCCCCCCC
Confidence            68999999999999999999999886            88889999999999984

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=6.4e-09  Score=69.99  Aligned_cols=40  Identities=18%  Similarity=0.383  Sum_probs=35.4

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD  164 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~  164 (426)
                      +++|+++++|.|.+|++.|.....|..|+++ ++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             SCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4678999999999999999999999999999 588999883

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=5.4e-09  Score=70.47  Aligned_cols=44  Identities=14%  Similarity=0.169  Sum_probs=40.4

Q ss_pred             CCCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccc
Q 037502            5 NSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE   60 (426)
Q Consensus         5 ~~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~   60 (426)
                      +.|+++|++++||.|.+||+.|.....            |..|+++|++++||.|.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            1 GSSGSSGSGEKPYECNECGKAFIWKSL------------LIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCSEECSSSCCEESSHHH------------HHHHHGGGSSCSCCCCC
T ss_pred             CCCCcccCCCcCeECCCCCcccCchHH------------HHHHHhHhcCCCCCCCC
Confidence            579999999999999999999999886            88999999999999873

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=5.1e-09  Score=71.20  Aligned_cols=40  Identities=15%  Similarity=0.325  Sum_probs=35.8

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD  164 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~  164 (426)
                      +++|+++++|.|.+|++.|.....|..|+++ ++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4678999999999999999999999999999 589999985

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=5.3e-09  Score=70.84  Aligned_cols=44  Identities=14%  Similarity=0.166  Sum_probs=39.9

Q ss_pred             CCCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcccccc
Q 037502            6 SPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEI   61 (426)
Q Consensus         6 ~~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~   61 (426)
                      ++..+|++++||.|.+|++.|.....            |..|+++|+++++|+|++
T Consensus         2 s~~~~h~~~k~~~C~~C~k~F~~~~~------------L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            2 SSGSSGTGQKPFECTHCGKSFRAKGN------------LVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCCSCCSEEETTTTEEESSHHH------------HHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCCcCccCCCCCCccCChHH------------HHHHHHHhCCCCCCCCCC
Confidence            46789999999999999999999886            888999999999999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=6.2e-09  Score=69.23  Aligned_cols=39  Identities=21%  Similarity=0.428  Sum_probs=33.9

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      +++|+++++|.|++|++.|.....|..|+++ ++++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            4678889999999999999999999999988 58888887

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.7e-08  Score=68.64  Aligned_cols=40  Identities=15%  Similarity=0.327  Sum_probs=33.4

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD  164 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~  164 (426)
                      +++|+++++|.|.+|++.|.....|..|+++ ++++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3568888888888888888888888888888 588888885

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.63  E-value=1.1e-08  Score=72.26  Aligned_cols=48  Identities=15%  Similarity=0.202  Sum_probs=22.8

Q ss_pred             ccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCe
Q 037502          113 ALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGH  161 (426)
Q Consensus       113 ~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~  161 (426)
                      .|.....|..| +++|+++++|.|.+||+.|...+.|..|+++ +|++||
T Consensus         5 ~~~~~~~l~~h-~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKP-RSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCC-HHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCcchhhH-HHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            33444444444 3444455555555555555555555555554 344444

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=4e-09  Score=80.42  Aligned_cols=65  Identities=25%  Similarity=0.529  Sum_probs=55.0

Q ss_pred             HHHHHHhhhCCCCccccccCCCcccChhhHHHHHHHcCCCCeecc-CCcccCChhhHHHHHHHhcCCCC
Q 037502          120 IKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCD-CGRVFSRVESFIEHQDACSKGHI  187 (426)
Q Consensus       120 l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~~~  187 (426)
                      |..| +++|.+++++.|..|++.|. ...|..|+..++++||.|. |++.|. ...|..|+++|.+...
T Consensus         5 L~~H-~~~~c~~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A            5 SSGH-EETECPLRLAVCQHCDLELS-ILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEVCGREGS   70 (75)
T ss_dssp             CSCC-CCCCCCCCCEECSSSCCEEC-HHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBSS
T ss_pred             HHhh-CcccCCCcccCCcccChHhh-HHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHHccCCcC
Confidence            4567 56789999999999999995 8999999933799999996 999987 5899999999977643

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.7e-08  Score=67.95  Aligned_cols=40  Identities=20%  Similarity=0.293  Sum_probs=34.0

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD  164 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~  164 (426)
                      +++|+++++|.|.+|++.|.....|..|+++ ++++||.|+
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4678888999999999999999999999888 588888884

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.59  E-value=2.1e-08  Score=68.16  Aligned_cols=38  Identities=18%  Similarity=0.503  Sum_probs=19.3

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      ++|+++++|.|.+|++.|.....|..|+++ ++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            344455555555555555555555555555 34555554

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.6e-08  Score=66.82  Aligned_cols=38  Identities=18%  Similarity=0.441  Sum_probs=30.9

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      ++|+++++|.|++|++.|.....|..|+++ ++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            467788888888888888888888888888 47888877

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.59  E-value=2.7e-08  Score=66.61  Aligned_cols=38  Identities=13%  Similarity=0.358  Sum_probs=29.3

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      ++|+++++|.|.+|++.|.....|..|+++ ++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            357777888888888888888888888877 47777777

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.57  E-value=3.2e-08  Score=65.68  Aligned_cols=38  Identities=24%  Similarity=0.542  Sum_probs=22.0

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      ++|+++++|.|.+|++.|.....|..|+++ ++++||.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            345555566666666666666666666555 35555555

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.8e-08  Score=67.43  Aligned_cols=38  Identities=24%  Similarity=0.486  Sum_probs=19.6

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      ++|+++++|.|.+|++.|.....|..|+++ ++++||.|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            344555555555555555555555555555 34555555

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=3.8e-08  Score=65.93  Aligned_cols=38  Identities=26%  Similarity=0.594  Sum_probs=20.6

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      ++|+++++|.|++|++.|.....|..|+++ ++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            345555555555555555555555555555 35555555

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.5e-08  Score=75.93  Aligned_cols=64  Identities=17%  Similarity=0.171  Sum_probs=45.6

Q ss_pred             hccCccccCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHH
Q 037502           44 VSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKH  123 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H  123 (426)
                      |..|+++|.++++|.|..|++.| ....|..|+ .|             .++++|.|+.|+       +.|. ...|..|
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~-------------c~~~~~~C~~C~-------~~~~-~~~l~~H   61 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DY-------------CGARTELCGNCG-------RNVL-VKDLKTH   61 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HH-------------HHHCEEECSSSC-------CEEE-TTGGGTH
T ss_pred             HHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hH-------------cCCCceEcccCC-------CcCc-HHHHHHH
Confidence            66777778888888888888888 477788887 66             567777777766       6555 3667777


Q ss_pred             HHhhhCCC
Q 037502          124 FRRKHSNH  131 (426)
Q Consensus       124 ~~r~H~~~  131 (426)
                      + ++|+++
T Consensus        62 ~-~~c~~~   68 (75)
T 2d9k_A           62 P-EVCGRE   68 (75)
T ss_dssp             H-HHBTTB
T ss_pred             H-HHccCC
Confidence            3 556554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.54  E-value=3.4e-08  Score=64.56  Aligned_cols=37  Identities=27%  Similarity=0.494  Sum_probs=32.4

Q ss_pred             cCCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeC
Q 037502           51 LLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVC  100 (426)
Q Consensus        51 h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C  100 (426)
                      |+++++|+|++||+.|...++|..|+++|             .++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-------------~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVH-------------RRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTT-------------CCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHc-------------CCCcccee
Confidence            56789999999999999999999999999             67787765

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=3.2e-08  Score=67.20  Aligned_cols=38  Identities=16%  Similarity=0.406  Sum_probs=20.3

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      ++|+++++|.|.+|++.|.....|..|+++ ++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            345555555555555555555555555555 35555555

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.51  E-value=6.7e-08  Score=62.10  Aligned_cols=34  Identities=29%  Similarity=0.664  Sum_probs=32.0

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      |+++|++++||+|+.||+.|.....|..|+++|.
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            6788999999999999999999999999999994

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=5.6e-08  Score=62.49  Aligned_cols=33  Identities=18%  Similarity=0.510  Sum_probs=30.5

Q ss_pred             ccccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           48 PKTLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        48 ~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +++|+++++|+|+.||+.|....+|..|+++|+
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            357899999999999999999999999999994

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.40  E-value=1.6e-07  Score=59.42  Aligned_cols=31  Identities=26%  Similarity=0.479  Sum_probs=28.9

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +|+++++|+|++||+.|....+|..|+++|+
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            4788999999999999999999999999994

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=6.5e-09  Score=81.87  Aligned_cols=58  Identities=7%  Similarity=0.033  Sum_probs=50.0

Q ss_pred             CCCCCCCCCCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502            7 PSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus         7 ~~~~~~~~kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +..+|++++||.|.+||+.|.....            |..|+++|++++||+|..|.    ....|..|.++|.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~------------L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~   73 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAE------------LTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYAD   73 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHH------------HHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHH------------HHHHHHHhCCCCCcccchhh----hHHHHHhhhcccc
Confidence            4567999999999999999999886            88899999999999998765    4567788888885

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.39  E-value=1.5e-07  Score=59.43  Aligned_cols=31  Identities=29%  Similarity=0.491  Sum_probs=28.8

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +|+++++|+|++||+.|....+|..|+++|+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHc
Confidence            4788999999999999999999999999994

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.39  E-value=1.4e-07  Score=61.45  Aligned_cols=36  Identities=11%  Similarity=0.310  Sum_probs=21.9

Q ss_pred             hCCCCccccccCCCcccChhhHHHHHHH-cCCCCeec
Q 037502          128 HSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSC  163 (426)
Q Consensus       128 H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C  163 (426)
                      |+++++|.|.+||+.|...+.|..|+++ ++++||.|
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4456666666666666666666666666 35666543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.37  E-value=2e-07  Score=69.07  Aligned_cols=41  Identities=24%  Similarity=0.302  Sum_probs=35.7

Q ss_pred             cccCCCCcccccc--CCcccCCchhHHHHh-hhccCccccccccCccccCcceeCCC
Q 037502           49 KTLLESDRYVCEI--CNQGFQRDQNLQMHR-RRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        49 ~~h~~~~py~C~~--Cgk~F~~~~~L~~H~-r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      ...++++||+|..  ||++|.+.++|..|+ ++|             ++++||.|..
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriH-------------TgEKP~~~~~   63 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVH-------------KSDLPAFSAE   63 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHS-------------SSCCCCCCCS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhC-------------CCCCCccccc
Confidence            3468899999975  999999999999998 689             7899998865

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=1.9e-07  Score=59.90  Aligned_cols=35  Identities=23%  Similarity=0.432  Sum_probs=26.7

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHHHHH-cCCCC
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRG  160 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp  160 (426)
                      ++|+++++|.|.+|++.|.....|..|+++ ++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            457788888888888888888888888877 46554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=3.4e-07  Score=59.00  Aligned_cols=33  Identities=18%  Similarity=0.329  Sum_probs=30.2

Q ss_pred             ccccCCCCccccccCCcccCCchhHHHH-hhhcc
Q 037502           48 PKTLLESDRYVCEICNQGFQRDQNLQMH-RRRHK   80 (426)
Q Consensus        48 ~~~h~~~~py~C~~Cgk~F~~~~~L~~H-~r~H~   80 (426)
                      +++|++++||+|+.||+.|.....|..| +++|+
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            3578999999999999999999999999 88984

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.27  E-value=4.7e-07  Score=57.06  Aligned_cols=32  Identities=22%  Similarity=0.548  Sum_probs=22.7

Q ss_pred             hCCCCccccccCCCcccChhhHHHHHHH-cCCC
Q 037502          128 HSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTR  159 (426)
Q Consensus       128 H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~k  159 (426)
                      |+++++|.|.+|++.|.....|..|+++ ++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            5677777777777777777777777777 3554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=3.8e-07  Score=58.50  Aligned_cols=32  Identities=22%  Similarity=0.389  Sum_probs=29.7

Q ss_pred             cccCCCCccccccCCcccCCc-hhHHHHhhhcc
Q 037502           49 KTLLESDRYVCEICNQGFQRD-QNLQMHRRRHK   80 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~-~~L~~H~r~H~   80 (426)
                      ++|++++||+|+.|++.|... ..|..|+++|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            568899999999999999999 99999999994

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=4.6e-07  Score=57.74  Aligned_cols=32  Identities=22%  Similarity=0.389  Sum_probs=29.4

Q ss_pred             cccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           49 KTLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ++|++++||+|++|++.|.....|..|+++|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            35788999999999999999999999999994

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.26  E-value=4e-07  Score=57.13  Aligned_cols=32  Identities=22%  Similarity=0.343  Sum_probs=28.9

Q ss_pred             CccccccCCcccCCchhHHHHhhhccCccccccccCccccCccee
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFV   99 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~   99 (426)
                      +||+|++||+.|....+|..|+++|             +++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H-------------~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLH-------------ELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHH-------------TTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHh-------------CCCCCCC
Confidence            5899999999999999999999999             6777764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=5e-07  Score=57.53  Aligned_cols=32  Identities=22%  Similarity=0.503  Sum_probs=29.7

Q ss_pred             cccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           49 KTLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ++|++++||+|++|++.|....+|..|+++|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            46889999999999999999999999999994

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=7.8e-07  Score=65.94  Aligned_cols=36  Identities=14%  Similarity=0.265  Sum_probs=18.4

Q ss_pred             hCCCCcccccc--CCCcccChhhHHHHH-HHc-CCCCeec
Q 037502          128 HSNHKQWVCEK--CSKGYAVQSDYKAHL-KTC-GTRGHSC  163 (426)
Q Consensus       128 H~~~k~~~C~~--C~k~f~~~~~L~~H~-~~h-~~kp~~C  163 (426)
                      ++|+|||+|.+  |+++|.+.++|..|+ ++| ++|||.|
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            34555555543  555555555555554 233 5555555

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=5.7e-07  Score=57.15  Aligned_cols=31  Identities=26%  Similarity=0.473  Sum_probs=29.1

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +|++++||+|++|++.|.....|..|+++|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            5888999999999999999999999999994

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.22  E-value=6.5e-07  Score=56.53  Aligned_cols=32  Identities=25%  Similarity=0.567  Sum_probs=22.1

Q ss_pred             hCCCCccccccCCCcccChhhHHHHHHH-cCCC
Q 037502          128 HSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTR  159 (426)
Q Consensus       128 H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~k  159 (426)
                      |+++++|.|.+|++.|.....|..|+++ ++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            5667777777777777777777777766 3444

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=8.8e-07  Score=56.22  Aligned_cols=31  Identities=19%  Similarity=0.509  Sum_probs=28.9

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +|+++++|+|++|++.|.....|..|+++|+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            5788999999999999999999999999994

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=7.8e-07  Score=58.25  Aligned_cols=31  Identities=19%  Similarity=0.262  Sum_probs=28.5

Q ss_pred             ccCCCCcccccc--CCcccCCchhHHHHhhhcc
Q 037502           50 TLLESDRYVCEI--CNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        50 ~h~~~~py~C~~--Cgk~F~~~~~L~~H~r~H~   80 (426)
                      .+++++||+|+.  |++.|.+.++|+.|+++|+
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            467899999986  9999999999999999995

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.18  E-value=5.7e-07  Score=58.01  Aligned_cols=29  Identities=24%  Similarity=0.763  Sum_probs=27.0

Q ss_pred             cCCCCccccc--cCCcccCCchhHHHHhhhc
Q 037502           51 LLESDRYVCE--ICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        51 h~~~~py~C~--~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |++++||+|+  .||+.|....+|..|+++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   31 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHh
Confidence            5788999999  5999999999999999999

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.16  E-value=7.3e-07  Score=57.06  Aligned_cols=32  Identities=19%  Similarity=0.457  Sum_probs=25.7

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHHc
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      +++|+++++|+|++|++.|.....|..|+++|
T Consensus         3 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCcCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            46788888888888888888888888888774

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.16  E-value=7.5e-07  Score=61.15  Aligned_cols=31  Identities=23%  Similarity=0.530  Sum_probs=28.6

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhh-hcc
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRR-RHK   80 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r-~H~   80 (426)
                      +|++++||+|++||+.|....+|..|++ +|.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            5889999999999999999999999999 895

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.3e-06  Score=55.50  Aligned_cols=31  Identities=32%  Similarity=0.568  Sum_probs=28.6

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +|.++++|+|+.|++.|.....|..|+++|+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            4678899999999999999999999999994

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.10  E-value=2.1e-06  Score=53.70  Aligned_cols=29  Identities=14%  Similarity=0.371  Sum_probs=16.1

Q ss_pred             ccccccCCCcccChhhHHHHHHH-cCCCCe
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT-CGTRGH  161 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~  161 (426)
                      ||.|++||+.|...+.|..|+++ +++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            45555555555555555555555 355554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.05  E-value=1.1e-06  Score=56.83  Aligned_cols=26  Identities=19%  Similarity=0.457  Sum_probs=17.1

Q ss_pred             hCCCCccccccCCCcccChhhHHHHH
Q 037502          128 HSNHKQWVCEKCSKGYAVQSDYKAHL  153 (426)
Q Consensus       128 H~~~k~~~C~~C~k~f~~~~~L~~H~  153 (426)
                      +.|+|||+|++|||+|.+.++|+.|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            34666666666666666666666666

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.05  E-value=2.4e-06  Score=54.98  Aligned_cols=34  Identities=18%  Similarity=0.370  Sum_probs=22.9

Q ss_pred             hCCCCccccc--cCCCcccChhhHHHHHHH-cCCCCe
Q 037502          128 HSNHKQWVCE--KCSKGYAVQSDYKAHLKT-CGTRGH  161 (426)
Q Consensus       128 H~~~k~~~C~--~C~k~f~~~~~L~~H~~~-h~~kp~  161 (426)
                      |+++++|.|.  .|++.|...+.|..|+++ +++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4566777777  377777777777777776 366655

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=1.6e-06  Score=55.72  Aligned_cols=31  Identities=16%  Similarity=0.358  Sum_probs=24.8

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHH-HHHc
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAH-LKTC  156 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H-~~~h  156 (426)
                      ++|++++||+|+.|++.|.....|..| +++|
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            467788888888888888888888888 6664

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.04  E-value=1.5e-06  Score=59.28  Aligned_cols=37  Identities=19%  Similarity=0.320  Sum_probs=32.6

Q ss_pred             hccCccccCCCCccccc--cCCcccCCchhHHHHhhhcc
Q 037502           44 VSLSPKTLLESDRYVCE--ICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~--~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +..|..+|++++||+|+  .||+.|...++|..|+++|+
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHcc
Confidence            44556779999999996  79999999999999999994

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=2.2e-06  Score=54.82  Aligned_cols=31  Identities=19%  Similarity=0.318  Sum_probs=23.8

Q ss_pred             hhhCCCCccccccCCCcccCh-hhHHHHHHHc
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQ-SDYKAHLKTC  156 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~-~~L~~H~~~h  156 (426)
                      ++|+++++|+|++|++.|... ..|..|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H   33 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAH   33 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhc
Confidence            357778888888888888887 7888887773

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=3.3e-06  Score=53.46  Aligned_cols=30  Identities=27%  Similarity=0.569  Sum_probs=21.6

Q ss_pred             hhCCCCccccccCCCcccChhhHHHHHHHc
Q 037502          127 KHSNHKQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       127 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      +|+++++|.|.+|++.|.....|..|+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKH   32 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHc
Confidence            466777777777777777777777777763

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.01  E-value=4.2e-07  Score=56.54  Aligned_cols=25  Identities=24%  Similarity=0.574  Sum_probs=23.8

Q ss_pred             CccccccCCcccCCchhHHHHhhhc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      +||+|++||+.|...++|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H   25 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTA   25 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHH
Confidence            4899999999999999999999999

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=3e-06  Score=53.75  Aligned_cols=30  Identities=27%  Similarity=0.458  Sum_probs=22.1

Q ss_pred             hhCCCCccccccCCCcccChhhHHHHHHHc
Q 037502          127 KHSNHKQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       127 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      .|+++++|+|.+|++.|.....|..|+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRH   32 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHS
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHh
Confidence            466777777777777777777777777764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=5.1e-06  Score=52.53  Aligned_cols=30  Identities=23%  Similarity=0.451  Sum_probs=21.3

Q ss_pred             hhCCCCccccccCCCcccChhhHHHHHHHc
Q 037502          127 KHSNHKQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       127 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      .|+++++|.|.+|++.|.....|..|+++|
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLH   32 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHh
Confidence            356677777777777777777777777763

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.97  E-value=3.2e-06  Score=49.91  Aligned_cols=26  Identities=23%  Similarity=0.516  Sum_probs=24.4

Q ss_pred             CCccccccCCcccCCchhHHHHhhhc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      ++||+|+.||+.|.....|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            46899999999999999999999988

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=3e-06  Score=53.81  Aligned_cols=30  Identities=17%  Similarity=0.349  Sum_probs=20.5

Q ss_pred             hhCCCCccccccCCCcccChhhHHHHHHHc
Q 037502          127 KHSNHKQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       127 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      .|+++++|+|.+|++.|.....|..|+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVH   32 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            356667777777777777777777776663

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=5e-06  Score=54.35  Aligned_cols=28  Identities=25%  Similarity=0.338  Sum_probs=14.8

Q ss_pred             hCCCCcccccc--CCCcccChhhHHHHHHH
Q 037502          128 HSNHKQWVCEK--CSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       128 H~~~k~~~C~~--C~k~f~~~~~L~~H~~~  155 (426)
                      ++++|||+|++  |++.|.+.+.|+.|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~   33 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKV   33 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            34555555543  55555555555555555

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.94  E-value=3.6e-06  Score=57.65  Aligned_cols=27  Identities=22%  Similarity=0.565  Sum_probs=14.2

Q ss_pred             hCCCCccccccCCCcccChhhHHHHHH
Q 037502          128 HSNHKQWVCEKCSKGYAVQSDYKAHLK  154 (426)
Q Consensus       128 H~~~k~~~C~~C~k~f~~~~~L~~H~~  154 (426)
                      |+++++|.|.+|++.|.....|..|++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            445555555555555555555555544

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.94  E-value=3.7e-06  Score=53.92  Aligned_cols=31  Identities=23%  Similarity=0.533  Sum_probs=28.2

Q ss_pred             ccCCCCcccccc--CCcccCCchhHHHHhhhcc
Q 037502           50 TLLESDRYVCEI--CNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        50 ~h~~~~py~C~~--Cgk~F~~~~~L~~H~r~H~   80 (426)
                      .|++++||+|++  ||+.|...+.|..|+++|+
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            478899999995  9999999999999999994

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.94  E-value=2.9e-06  Score=50.28  Aligned_cols=26  Identities=31%  Similarity=0.667  Sum_probs=24.3

Q ss_pred             CCccccccCCcccCCchhHHHHhhhc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      ++||+|+.||+.|...++|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            46899999999999999999999988

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.93  E-value=6.5e-06  Score=60.81  Aligned_cols=32  Identities=25%  Similarity=0.512  Sum_probs=29.6

Q ss_pred             cccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           49 KTLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ..|.+++||+|++|+|.|....+|..|+++|+
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            45788999999999999999999999999995

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.92  E-value=1.7e-06  Score=53.71  Aligned_cols=31  Identities=16%  Similarity=0.085  Sum_probs=26.4

Q ss_pred             CCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCcc
Q 037502           15 EPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRY   57 (426)
Q Consensus        15 kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py   57 (426)
                      +||.|.+||+.|.....            |..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~------------L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDA------------LSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHT------------TSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHH------------HHHHHHHHccCCCC
Confidence            68999999999999987            66667778888876

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.92  E-value=3.8e-06  Score=54.24  Aligned_cols=26  Identities=31%  Similarity=0.728  Sum_probs=24.0

Q ss_pred             cCCCCccccccCCcccCCchhHHHHh
Q 037502           51 LLESDRYVCEICNQGFQRDQNLQMHR   76 (426)
Q Consensus        51 h~~~~py~C~~Cgk~F~~~~~L~~H~   76 (426)
                      +++++||+|++|||+|.+.++|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            57889999999999999999999997

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.91  E-value=4.7e-06  Score=49.49  Aligned_cols=27  Identities=26%  Similarity=0.688  Sum_probs=24.8

Q ss_pred             CCccccccCCcccCCchhHHHHhhhcc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ++||+|+.||+.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999999984

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=7.4e-06  Score=51.88  Aligned_cols=28  Identities=32%  Similarity=0.632  Sum_probs=18.8

Q ss_pred             hCCCCccccccCCCcccChhhHHHHHHH
Q 037502          128 HSNHKQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       128 H~~~k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      |.++++|.|.+|++.|.....|..|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHH
Confidence            5566666676666666666666666666

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.87  E-value=7.3e-06  Score=48.92  Aligned_cols=26  Identities=27%  Similarity=0.654  Sum_probs=24.4

Q ss_pred             CccccccCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||.|+.||+.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            58999999999999999999999994

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=6.9e-06  Score=49.25  Aligned_cols=27  Identities=22%  Similarity=0.551  Sum_probs=25.1

Q ss_pred             CCccccccCCcccCCchhHHHHhhhcc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ++||.|+.||+.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhc
Confidence            468999999999999999999999994

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.82  E-value=9.2e-06  Score=48.38  Aligned_cols=26  Identities=38%  Similarity=0.949  Sum_probs=24.4

Q ss_pred             CccccccCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||+|++||+.|.....|..|+++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhc
Confidence            47999999999999999999999994

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.79  E-value=3.8e-05  Score=56.65  Aligned_cols=30  Identities=20%  Similarity=0.470  Sum_probs=18.9

Q ss_pred             CCCCeecc-CCcccCChhhHHHHHHHhcCCC
Q 037502          157 GTRGHSCD-CGRVFSRVESFIEHQDACSKGH  186 (426)
Q Consensus       157 ~~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~~  186 (426)
                      +++||.|+ |++.|.+.+.|.+|+++|+++.
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            45666664 6666666666666666666654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.78  E-value=1.6e-05  Score=48.81  Aligned_cols=27  Identities=30%  Similarity=0.819  Sum_probs=25.0

Q ss_pred             CCccccc--cCCcccCCchhHHHHhhhcc
Q 037502           54 SDRYVCE--ICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        54 ~~py~C~--~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ++||+|+  .||+.|.....|..|+++|+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            4689999  89999999999999999994

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.77  E-value=1.2e-05  Score=47.07  Aligned_cols=25  Identities=36%  Similarity=0.824  Sum_probs=22.8

Q ss_pred             ccccccCCcccCCchhHHHHhhhcc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ||+|++||+.|.....|..|+++|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            5899999999999999999999994

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.95  E-value=3.7e-06  Score=49.16  Aligned_cols=25  Identities=40%  Similarity=0.810  Sum_probs=21.9

Q ss_pred             CccccccCCcccCCchhHHHHhhhc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      +||+|++||+.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4789999999999999999998887

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.75  E-value=1.5e-05  Score=47.68  Aligned_cols=26  Identities=23%  Similarity=0.530  Sum_probs=24.4

Q ss_pred             CccccccCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ++|.|+.||+.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHc
Confidence            47999999999999999999999995

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=1.1e-05  Score=47.81  Aligned_cols=26  Identities=27%  Similarity=0.537  Sum_probs=24.4

Q ss_pred             CccccccCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||+|+.||+.|.....|..|+++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhc
Confidence            58999999999999999999999994

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.75  E-value=1.7e-05  Score=50.73  Aligned_cols=28  Identities=36%  Similarity=0.643  Sum_probs=17.5

Q ss_pred             hCCCCcccccc--CCCcccChhhHHHHHHH
Q 037502          128 HSNHKQWVCEK--CSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       128 H~~~k~~~C~~--C~k~f~~~~~L~~H~~~  155 (426)
                      |+++++|.|.+  ||+.|...+.|..|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            45666666653  66666666666666665

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.73  E-value=1.1e-05  Score=47.95  Aligned_cols=26  Identities=31%  Similarity=0.580  Sum_probs=24.4

Q ss_pred             CccccccCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||+|+.||+.|.....|..|+++|.
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhc
Confidence            48999999999999999999999994

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.90  E-value=4.7e-06  Score=49.92  Aligned_cols=26  Identities=27%  Similarity=0.649  Sum_probs=23.9

Q ss_pred             CccccccCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||+|++||+.|....+|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            47999999999999999999999994

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.71  E-value=1.8e-05  Score=48.19  Aligned_cols=26  Identities=35%  Similarity=0.857  Sum_probs=24.2

Q ss_pred             Cccccc--cCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCE--ICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~--~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||+|+  .||+.|...+.|..|+++|+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence            489998  99999999999999999994

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.71  E-value=2.3e-05  Score=46.85  Aligned_cols=26  Identities=35%  Similarity=0.678  Sum_probs=12.7

Q ss_pred             CCeecc-CCcccCChhhHHHHHHHhcC
Q 037502          159 RGHSCD-CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       159 kp~~C~-Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      +||.|+ |++.|.....|..|+++|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            444553 55555555555555554443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.89  E-value=4.9e-06  Score=50.07  Aligned_cols=27  Identities=37%  Similarity=0.625  Sum_probs=24.6

Q ss_pred             CCccccccCCcccCCchhHHHHhhhcc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ++||+|+.||+.|....+|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            368999999999999999999999994

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.70  E-value=2e-05  Score=46.31  Aligned_cols=24  Identities=29%  Similarity=0.504  Sum_probs=13.1

Q ss_pred             CccccccCCCcccChhhHHHHHHH
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      +||.|..||+.|.....|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH
Confidence            455555555555555555555544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.64  E-value=2.6e-05  Score=46.79  Aligned_cols=26  Identities=35%  Similarity=0.797  Sum_probs=23.8

Q ss_pred             CccccccCCcccCCchhHHHH-hhhcc
Q 037502           55 DRYVCEICNQGFQRDQNLQMH-RRRHK   80 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H-~r~H~   80 (426)
                      +||.|+.||+.|.....|..| +++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHcc
Confidence            479999999999999999999 78884

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.63  E-value=2.5e-05  Score=46.16  Aligned_cols=24  Identities=17%  Similarity=0.697  Sum_probs=12.0

Q ss_pred             CccccccCCCcccChhhHHHHHHH
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ++|.|.+|++.|.....|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHh
Confidence            445555555555555555555444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.63  E-value=1.6e-05  Score=46.90  Aligned_cols=24  Identities=21%  Similarity=0.567  Sum_probs=11.6

Q ss_pred             CccccccCCCcccChhhHHHHHHH
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      +||.|..||+.|...+.|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            344555555555544444444443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.62  E-value=3e-05  Score=46.11  Aligned_cols=25  Identities=20%  Similarity=0.405  Sum_probs=12.2

Q ss_pred             Ceecc-CCcccCChhhHHHHHHHhcC
Q 037502          160 GHSCD-CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       160 p~~C~-Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      ||.|+ ||+.|...+.|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            44453 55555555555555554443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.61  E-value=4e-05  Score=45.70  Aligned_cols=23  Identities=35%  Similarity=0.603  Sum_probs=12.1

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      +|.|.+||+.|...+.|..|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CccCCCCCCccCCHHHHHHHHHH
Confidence            45555555555555555555554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.56  E-value=5.7e-05  Score=44.73  Aligned_cols=23  Identities=35%  Similarity=0.846  Sum_probs=10.2

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      +|.|.+|++.|.....|..|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRS   24 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHHH
Confidence            34444444444444444444444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.51  E-value=0.00018  Score=52.61  Aligned_cols=53  Identities=15%  Similarity=0.397  Sum_probs=34.2

Q ss_pred             eeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCC------ccccc--cCCCcccChhhHHHHHHH
Q 037502           98 FVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK------QWVCE--KCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus        98 ~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k------~~~C~--~C~k~f~~~~~L~~H~~~  155 (426)
                      |.|.+.+|+     +.|.+...|..|+.+.|.+.+      +|.|.  .|++.+.....|..|+++
T Consensus         2 l~C~W~~C~-----~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            2 LKCKWKECP-----ESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCTTCC-----CCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CeEeeCCCC-----CcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            456665555     777777777777656676654      56664  466666666666666655

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.51  E-value=5.8e-05  Score=44.54  Aligned_cols=23  Identities=35%  Similarity=0.689  Sum_probs=10.8

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ||.|..|++.|.....|..|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHH
Confidence            44444444444444444444444

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=7.2e-05  Score=44.19  Aligned_cols=22  Identities=27%  Similarity=0.727  Sum_probs=9.1

Q ss_pred             cccccCCCcccChhhHHHHHHH
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      |.|.+|++.|.....|..|+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRI   24 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHHHH
Confidence            4444444444444444444433

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.45  E-value=4.3e-05  Score=51.78  Aligned_cols=31  Identities=23%  Similarity=0.500  Sum_probs=23.3

Q ss_pred             hhhCCCCccccc--cCCCcccChhhHHHHHHHc
Q 037502          126 RKHSNHKQWVCE--KCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       126 r~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h  156 (426)
                      ..|+++++|.|.  .||+.|...+.|..|+++|
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H   43 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH   43 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHc
Confidence            457788888885  5888888888888887774

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.44  E-value=5.6e-05  Score=44.07  Aligned_cols=22  Identities=18%  Similarity=0.593  Sum_probs=11.3

Q ss_pred             cccccCCCcccChhhHHHHHHH
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      |+|.+|++.|.....|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~   23 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRV   23 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             ccCCCCCCcCCCHHHHHHHHHH
Confidence            4555555555555555555444

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.56  E-value=2e-05  Score=45.85  Aligned_cols=23  Identities=30%  Similarity=0.821  Sum_probs=12.6

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ||.|.+||+.|...+.|..|+++
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            45555555555555555555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.43  E-value=5.6e-05  Score=44.76  Aligned_cols=26  Identities=31%  Similarity=0.726  Sum_probs=24.0

Q ss_pred             Cccccc--cCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCE--ICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~--~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ++|+|+  .||+.|...+.|..|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            479999  99999999999999999983

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.41  E-value=9.5e-05  Score=45.10  Aligned_cols=24  Identities=25%  Similarity=0.677  Sum_probs=11.4

Q ss_pred             Cccccc--cCCCcccChhhHHHHHHH
Q 037502          132 KQWVCE--KCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       132 k~~~C~--~C~k~f~~~~~L~~H~~~  155 (426)
                      +||.|.  .||+.|.....|..|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~   27 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHH
Confidence            344444  444444444444444444

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.47  E-value=2.7e-05  Score=46.62  Aligned_cols=24  Identities=25%  Similarity=0.675  Sum_probs=11.5

Q ss_pred             CccccccCCCcccChhhHHHHHHH
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ++|.|..||+.|.....|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRI   25 (30)
Confidence            344444444444444444444444

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.47  E-value=2.8e-05  Score=46.36  Aligned_cols=23  Identities=26%  Similarity=0.560  Sum_probs=10.8

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ||.|.+||+.|...+.|..|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQ   24 (29)
Confidence            34444444444444444444444

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.32  E-value=0.00012  Score=44.29  Aligned_cols=18  Identities=22%  Similarity=0.540  Sum_probs=7.5

Q ss_pred             cCCCcccChhhHHHHHHH
Q 037502          138 KCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       138 ~C~k~f~~~~~L~~H~~~  155 (426)
                      .||+.|...+.|..|+++
T Consensus         9 ~C~k~f~~~~~L~~H~~~   26 (31)
T 1sp2_A            9 YCGKRFTRSDELQRHKRT   26 (31)
T ss_dssp             TCCCBCSSHHHHHHHHTT
T ss_pred             CCCcccCCHhHHHHHHHH
Confidence            344444444444444433

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.15  E-value=0.00023  Score=42.44  Aligned_cols=25  Identities=20%  Similarity=0.482  Sum_probs=14.7

Q ss_pred             CccccccCCCcccChhhHHHH-HHHc
Q 037502          132 KQWVCEKCSKGYAVQSDYKAH-LKTC  156 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H-~~~h  156 (426)
                      ++|.|..||+.|.....|..| +++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H   26 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIH   26 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTS
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHc
Confidence            356666666666666666666 3443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.98  E-value=0.0013  Score=48.03  Aligned_cols=49  Identities=20%  Similarity=0.384  Sum_probs=41.5

Q ss_pred             ccccc--CCCcccChhhHHHHHHH-c-CCC------Ceecc---CCcccCChhhHHHHHHHh
Q 037502          134 WVCEK--CSKGYAVQSDYKAHLKT-C-GTR------GHSCD---CGRVFSRVESFIEHQDAC  182 (426)
Q Consensus       134 ~~C~~--C~k~f~~~~~L~~H~~~-h-~~k------p~~C~---Cgk~F~~~~~L~~H~r~h  182 (426)
                      |.|..  |++.|.+...|..|+.. | +.+      +|.|.   |++.+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            56654  99999999999999965 7 443      79993   999999999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.90  E-value=0.00036  Score=41.04  Aligned_cols=25  Identities=20%  Similarity=0.553  Sum_probs=16.1

Q ss_pred             Cccccc--cCCCcccChhhHHHHHHHc
Q 037502          132 KQWVCE--KCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       132 k~~~C~--~C~k~f~~~~~L~~H~~~h  156 (426)
                      ++|.|.  .|++.|...+.|..|+++|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            356666  6666666666666666653

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.96  E-value=0.0015  Score=53.89  Aligned_cols=29  Identities=14%  Similarity=0.385  Sum_probs=23.5

Q ss_pred             hhCCCCccccccCCCcccChhhHHHHHHH
Q 037502          127 KHSNHKQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       127 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      .|+|+++|.|..|++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            46788888888888888888888888766

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.84  E-value=0.0021  Score=53.08  Aligned_cols=33  Identities=24%  Similarity=0.298  Sum_probs=29.6

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhc
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      .-..|+|+++|.|..|++.|.+...|..|+++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            456789999999999999999999999998765

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.27  E-value=0.018  Score=47.83  Aligned_cols=83  Identities=12%  Similarity=0.257  Sum_probs=47.6

Q ss_pred             CccccccCCcccCCchhHHHHh--hhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCC
Q 037502           55 DRYVCEICNQGFQRDQNLQMHR--RRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK  132 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~--r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k  132 (426)
                      +++.|.+|+..|.+.+.+..|.  +.|..            ..+.|.+. ++...--+.+.|....    + ...+.+.+
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~------------~v~~~~~~-~~~~~~~~~~~~~~~~----~-~~~~~~~~   92 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHAN------------KVRRYMAI-NQGEDSVPAKKFKAAP----A-EISDGEDR   92 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHH------------HHHHHHHH-TTCCCCCSCCCCSCCS----S-CCSSCCCT
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHH------------HHHHHhcc-cCcccCCCCCccCCCc----c-ccccCCCC
Confidence            4688999999999999999998  66631            11122210 0000000001221110    1 12344566


Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      .|-|..|++.|.....|..|+..
T Consensus        93 ~~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           93 SKCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             TTEETTTTEECSSHHHHHHHHTS
T ss_pred             CeEcCCCCCEeCCHHHHHHHHCC
Confidence            77888888888888888887654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.10  E-value=0.015  Score=50.67  Aligned_cols=145  Identities=19%  Similarity=0.364  Sum_probs=85.9

Q ss_pred             CCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHH-hhhccCccccccccCccc
Q 037502           15 EPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMH-RRRHKVPWKLLKRETPVV   93 (426)
Q Consensus        15 kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H-~r~H~~~~~~~~~~~~~~   93 (426)
                      ..|.|.+|...|.....+.-+-.+.. ..+.....    .....|+.|...+.....+..- +..-             .
T Consensus        17 ~~~~C~IC~~~~~~pv~~~CgH~fC~-~Ci~~~~~----~~~~~CP~Cr~~~~~~~~~~~~~~~~~-------------i   78 (170)
T 3hcs_A           17 SKYECPICLMALREAVQTPCGHRFCK-ACIIKSIR----DAGHKCPVDNEILLENQLFPDNFAKRE-------------I   78 (170)
T ss_dssp             GGGBCTTTCSBCSSEEECTTSCEEEH-HHHHHHHH----HHCSBCTTTCCBCCGGGCEECHHHHHH-------------H
T ss_pred             CCCCCCCCChhhcCcEECCCCCHHHH-HHHHHHHH----hCCCCCCCCccCcchhhhhhhHHHHHH-------------H
Confidence            45899999988865433211110000 00111100    1123788888776543111000 0000             2


Q ss_pred             cCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCC
Q 037502           94 RKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSR  171 (426)
Q Consensus        94 ~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~  171 (426)
                      .+....|+.-||.      .......+..|+  ..-.-++..|..|+..+ ....|..|+.. ...+.-.|. |+..|. 
T Consensus        79 ~~l~v~C~n~GC~------~~~~~~~l~~H~--~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-  148 (170)
T 3hcs_A           79 LSLMVKCPNEGCL------HKMELRHLEDHQ--AHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-  148 (170)
T ss_dssp             HTSEEECCSTTCC------CEEEGGGHHHHH--TTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-
T ss_pred             hhcccCCCCCCCC------ceecHhHHHHHH--hcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-
Confidence            2455678655653      334466777884  23355678999999988 56789999976 899999996 999884 


Q ss_pred             hhhHHHHHHHhcCCCC
Q 037502          172 VESFIEHQDACSKGHI  187 (426)
Q Consensus       172 ~~~L~~H~r~h~~~~~  187 (426)
                      ...|..|+..+.|+..
T Consensus       149 ~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          149 FEDKEIHDQNCPLALE  164 (170)
T ss_dssp             GGGHHHHHTTCCC---
T ss_pred             HHHHHhHHHhCcChhh
Confidence            5688999999988764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.49  E-value=0.062  Score=35.98  Aligned_cols=24  Identities=17%  Similarity=0.553  Sum_probs=15.5

Q ss_pred             CccccccCCCcccChhhHHHHHHH
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      -.|.|+.|+..|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            346666666666666666666665

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.31  E-value=0.056  Score=44.81  Aligned_cols=75  Identities=20%  Similarity=0.242  Sum_probs=48.9

Q ss_pred             CcceeCCCCCCCCCCcccccCCHHHHHHHHH-hhhCCC-CccccccC------CCcccChhhHHHHHHH-cCCCCeecc-
Q 037502           95 KRVFVCPEPSCLHHDPCHALGDLVGIKKHFR-RKHSNH-KQWVCEKC------SKGYAVQSDYKAHLKT-CGTRGHSCD-  164 (426)
Q Consensus        95 ~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~-r~H~~~-k~~~C~~C------~k~f~~~~~L~~H~~~-h~~kp~~C~-  164 (426)
                      .+++.|..|+       ..|.....+..|+. +.|... +.|.+..+      ++.|....    +... .+.+.|.|+ 
T Consensus        30 ~~~~~C~~C~-------v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~   98 (127)
T 1zu1_A           30 FSDTQCKVCS-------AVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPV   98 (127)
T ss_dssp             BCSSEETTTT-------EECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETT
T ss_pred             CCCCcCcCCC-------CEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCC
Confidence            5678999998       88999999999963 334321 33443211      22332211    1112 356789997 


Q ss_pred             CCcccCChhhHHHHHH
Q 037502          165 CGRVFSRVESFIEHQD  180 (426)
Q Consensus       165 Cgk~F~~~~~L~~H~r  180 (426)
                      |++.|.....|..|..
T Consensus        99 C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           99 CNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TTEECSSHHHHHHHHT
T ss_pred             CCCEeCCHHHHHHHHC
Confidence            9999999999999984

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.43  E-value=0.089  Score=45.63  Aligned_cols=82  Identities=21%  Similarity=0.323  Sum_probs=58.0

Q ss_pred             CCcccc--ccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           54 SDRYVC--EICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        54 ~~py~C--~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      +....|  ..|+..+. ...|..|...-              .-.+..|+.|+       ..+ ....|..|+ ...-..
T Consensus        80 ~l~v~C~n~GC~~~~~-~~~l~~H~~~C--------------~~~~v~C~~C~-------~~~-~r~~l~~H~-~~~C~~  135 (170)
T 3hcs_A           80 SLMVKCPNEGCLHKME-LRHLEDHQAHC--------------EFALMDCPQCQ-------RPF-QKFHINIHI-LKDCPR  135 (170)
T ss_dssp             TSEEECCSTTCCCEEE-GGGHHHHHTTC--------------TTSEEECTTTC-------CEE-EGGGHHHHH-HHTCTT
T ss_pred             hcccCCCCCCCCceec-HhHHHHHHhcC--------------CceeeECCCCC-------hHH-HHHHHHHHh-hhhCCC
Confidence            345677  56887664 56788887554              35678899766       555 567789995 456678


Q ss_pred             CccccccCCCcccChhhHHHHHHH-cCCCC
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKT-CGTRG  160 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp  160 (426)
                      +.-.|..|+..|.. ..|..|..+ .|+.+
T Consensus       136 r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          136 RQVSCDNCAASMAF-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             CEEECTTTCCEEEG-GGHHHHHTTCCC---
T ss_pred             CCeECCCCCCccCH-HHHHhHHHhCcChhh
Confidence            88899999998864 678999988 46554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.33  E-value=0.063  Score=35.95  Aligned_cols=25  Identities=28%  Similarity=0.499  Sum_probs=22.9

Q ss_pred             CccccccCCcccCCchhHHHHhhhc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      .+|.|+.|+..|.....|+.||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5799999999999999999999865

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.02  E-value=0.24  Score=37.06  Aligned_cols=45  Identities=24%  Similarity=0.677  Sum_probs=30.3

Q ss_pred             CccccccCCCcccChhhHHHHHHHc-CCCCeec-cCCcccCChhhHHHH
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKTC-GTRGHSC-DCGRVFSRVESFIEH  178 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~h-~~kp~~C-~Cgk~F~~~~~L~~H  178 (426)
                      -.|.|+.||..+. +..|..|...+ +-..|.| ||++.|.. ..++.|
T Consensus         9 V~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            9 VFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             eEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            3478888887766 45677887664 4467888 68888864 444444

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=85.96  E-value=0.37  Score=38.14  Aligned_cols=29  Identities=17%  Similarity=0.427  Sum_probs=21.3

Q ss_pred             CCcccccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCccc
Q 037502           15 EPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGF   66 (426)
Q Consensus        15 kpy~C~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F   66 (426)
                      .||+|..||..|....                       .+|-+|+.|+-..
T Consensus        66 ~p~~C~~CG~~F~~~~-----------------------~kPsrCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFKAEI-----------------------NIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCCCCS-----------------------SCCSSCSSSCCCC
T ss_pred             ECcChhhCcCeecccC-----------------------CCCCCCcCCCCCc
Confidence            5899999999993222                       2578899997554

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=83.68  E-value=2.8  Score=30.70  Aligned_cols=61  Identities=16%  Similarity=0.319  Sum_probs=39.8

Q ss_pred             CCCCCCCCCCCCCCccc-ccccccccCcCCCCCCCCCCCcchhccCccccCCCCccccccCCcccCCchhHHHHhhh
Q 037502            3 ANNSPSAIPCSSEPFSC-LENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR   78 (426)
Q Consensus         3 ~~~~~~~~~~~~kpy~C-~~Cg~~f~~~~~l~~H~~~~~~~~l~~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~   78 (426)
                      ++..|. ....-.+-.| ..||..+.+..             +..|....=..++..|..|+..|. ...|..|...
T Consensus         4 ~l~~H~-~~C~~~~v~C~~~C~~~v~r~~-------------l~~H~~~~C~~r~v~C~~C~~~~~-~~~l~~H~~~   65 (76)
T 2yuc_A            4 GSSGHL-NTCSFNVIPCPNRCPMKLSRRD-------------LPAHLQHDCPKRRLKCEFCGCDFS-GEAYESHEGM   65 (76)
T ss_dssp             SCSCCC-CCCCCSCCBCTTCCSCBCCSSS-------------STTTTTTSCTTSCCCCSSSCCCCC-HHHHHHTTTS
T ss_pred             HHHHHH-HHCCCcccCCCccccHHhhHhH-------------HHhhCHhhCCCcceECCCCCCccC-HHHHHHHHhH
Confidence            345555 4555567789 68998876544             444444334456788999999886 4567777643

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=83.67  E-value=1.2  Score=27.78  Aligned_cols=28  Identities=29%  Similarity=0.568  Sum_probs=23.6

Q ss_pred             ceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           97 VFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        97 ~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      -|.|+.|.       +.|.+...|..|+...|...
T Consensus         5 GFiCP~C~-------~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCM-------KSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTC-------CEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHH-------HHcCCHHHHHHHHHhccccC
Confidence            38999988       89999999999998888653

>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*

Probab=80.55  E-value=15  Score=36.67  Aligned_cols=24  Identities=21%  Similarity=0.340  Sum_probs=15.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q 037502          338 ACAEEARQAAKRQIELAEQEFANA  361 (426)
Q Consensus       338 ~~ae~ar~~Akrq~e~Ae~e~~~A  361 (426)
                      +.||+.+++|++|++.|+..+|+-
T Consensus       317 ~~Aer~~e~a~ael~~a~k~~a~~  340 (551)
T 2b5u_A          317 EAAERNYERARAELNQANEDVARN  340 (551)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456666667777777666666643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	426
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.42
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.38
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.08
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.02
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.0
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.98
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.95
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.94
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.92
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.87
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.84
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.81
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.81
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.8
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.8
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.75
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.72
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.67
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.63
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.63
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.61
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.57
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.5
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.47
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.46
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.44
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.41
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.29
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.28
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.28
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.23
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.19
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.19
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.18
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.15
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.14
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.11
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.08
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.07
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.04
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.9
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.89
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.87
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.84
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.67
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.48
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.29
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.19
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.14
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.12
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.0
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.93
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.88
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.87
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.68
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.68
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.67
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.59
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.51
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.41
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.36
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.35
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.32
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.3
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.26
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.25
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.22
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.21
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.2
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.17
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.13
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.04
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.59
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.52
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.45
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.4
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.35
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.18
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.08
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.99
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.86
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.76
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	94.7
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.68
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.29
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.23
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.8
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.63
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.44
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.36
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.77
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	92.32
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.89
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.73
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	91.54
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.19
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	90.95
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	90.46
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.26
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	88.84
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	88.0
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	86.85
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	86.82
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.21
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	85.19
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	84.4
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	82.32
d1y0jb1	36	U-shaped transcription factor, different fingers {	81.21
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	80.46
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	80.3

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.1e-14  Score=98.73  Aligned_cols=43  Identities=16%  Similarity=0.383  Sum_probs=23.0

Q ss_pred             cccCCHHHHHHHHHhhhCCCCccccccCCCcccChhhHHHHHHH
Q 037502          112 HALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       112 ~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      +.|.....|..| +++|+|++||.|.+||++|...+.|..|+++
T Consensus        10 k~F~~~~~l~~H-~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1          10 KSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CEESSHHHHHHH-HHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CeECCHHHhHHH-hhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            555555555555 3455555555555555555555555555543

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.4e-13  Score=96.50  Aligned_cols=51  Identities=25%  Similarity=0.622  Sum_probs=48.5

Q ss_pred             CCccccccCCCcccChhhHHHHHHH-cCCCCeecc-CCcccCChhhHHHHHHHh
Q 037502          131 HKQWVCEKCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESFIEHQDAC  182 (426)
Q Consensus       131 ~k~~~C~~C~k~f~~~~~L~~H~~~-h~~kp~~C~-Cgk~F~~~~~L~~H~r~h  182 (426)
                      ||||+|+ ||+.|.....|..|+++ .|++||.|+ ||++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 99999999999999999 599999996 999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3e-11  Score=77.80  Aligned_cols=35  Identities=34%  Similarity=0.631  Sum_probs=33.3

Q ss_pred             cCccccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           46 LSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        46 ~h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +|+++|++++||+|++|||+|...++|..|+++|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   36 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT   36 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCC
Confidence            58899999999999999999999999999999994

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=6.2e-11  Score=75.79  Aligned_cols=33  Identities=30%  Similarity=0.698  Sum_probs=32.0

Q ss_pred             CccccCCCCccccccCCcccCCchhHHHHhhhc
Q 037502           47 SPKTLLESDRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        47 h~~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |.|+|++++||+|++||+.|.+.++|..|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            789999999999999999999999999999999

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=7.9e-11  Score=75.83  Aligned_cols=37  Identities=30%  Similarity=0.691  Sum_probs=32.8

Q ss_pred             CCCccccccCCcccCCchhHHHHhh-hccCccccccccCccccCcceeCCC
Q 037502           53 ESDRYVCEICNQGFQRDQNLQMHRR-RHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        53 ~~~py~C~~Cgk~F~~~~~L~~H~r-~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      -++||+|++||+.|...++|+.|++ +|             +|++||+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~H-------------t~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVH-------------TSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTS-------------CCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCcc-------------CCCcCcCCcC
Confidence            3689999999999999999999986 68             7899999964

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=9.6e-11  Score=74.37  Aligned_cols=32  Identities=31%  Similarity=0.631  Sum_probs=30.7

Q ss_pred             cccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           49 KTLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      |+|+|++||+|++||++|...++|..|+++|+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            68999999999999999999999999999995

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.7e-10  Score=73.32  Aligned_cols=37  Identities=11%  Similarity=0.413  Sum_probs=26.4

Q ss_pred             CcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCcccccc
Q 037502           95 KRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK  138 (426)
Q Consensus        95 ~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~  138 (426)
                      +|||+|.+||       +.|....+|..|++++|+|+|||+|++
T Consensus         3 ~Kpy~C~~Cg-------k~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCG-------KGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSC-------CEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCC-------CCcCChHHhhccCcCccCCCcCcCCcC
Confidence            5677777776       777777777777655677777777753

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.7e-10  Score=71.36  Aligned_cols=31  Identities=29%  Similarity=0.509  Sum_probs=29.4

Q ss_pred             ccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           50 TLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        50 ~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +|++++||+|++||++|...++|..|+++|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            5899999999999999999999999999994

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.7e-10  Score=72.22  Aligned_cols=33  Identities=24%  Similarity=0.569  Sum_probs=28.5

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHHHHHcCC
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGT  158 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~  158 (426)
                      |+|+|+|||+|.+||++|...+.|+.|+++|..
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            578999999999999999999999999988533

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=4.7e-10  Score=71.02  Aligned_cols=32  Identities=25%  Similarity=0.538  Sum_probs=29.5

Q ss_pred             cccCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           49 KTLLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        49 ~~h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      |+|+|++||+|++||+.|.+.++|+.|++.++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            68999999999999999999999999987654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=5.8e-10  Score=69.87  Aligned_cols=30  Identities=27%  Similarity=0.507  Sum_probs=28.8

Q ss_pred             cCCCCccccccCCcccCCchhHHHHhhhcc
Q 037502           51 LLESDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        51 h~~~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      |+|++||+|++|+|.|.+.++|+.|+++|+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            789999999999999999999999999995

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=9.8e-10  Score=67.86  Aligned_cols=30  Identities=27%  Similarity=0.488  Sum_probs=22.6

Q ss_pred             hhCCCCccccccCCCcccChhhHHHHHHHc
Q 037502          127 KHSNHKQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       127 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      +|+|+|||+|.+||++|...++|..|+++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~H   30 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH   30 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcccc
Confidence            477777777777777777777777777774

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=4.2e-10  Score=72.32  Aligned_cols=34  Identities=24%  Similarity=0.643  Sum_probs=26.6

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHHc-CC
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTC-GT  158 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h-~~  158 (426)
                      +++|+++|||+|++|||+|...++|..|+++| ||
T Consensus         4 ~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            56788888888888888888888888888773 53

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=8.5e-10  Score=69.80  Aligned_cols=33  Identities=24%  Similarity=0.475  Sum_probs=27.9

Q ss_pred             hhhCCCCccccccCCCcccChhhHHHHHHH-cCC
Q 037502          126 RKHSNHKQWVCEKCSKGYAVQSDYKAHLKT-CGT  158 (426)
Q Consensus       126 r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~  158 (426)
                      |+|+|+|||+|++|++.|++.++|+.|++. |++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            468899999999999999999999999876 654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=7e-10  Score=70.77  Aligned_cols=32  Identities=19%  Similarity=0.457  Sum_probs=27.8

Q ss_pred             HhhhCCCCccccccCCCcccChhhHHHHHHHc
Q 037502          125 RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       125 ~r~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      .|+|+|+|||+|.+|++.|.+.++|..|+++|
T Consensus         3 ~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            47889999999999999999999999998875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.75  E-value=1.2e-09  Score=64.82  Aligned_cols=27  Identities=33%  Similarity=0.773  Sum_probs=25.6

Q ss_pred             CCccccccCCcccCCchhHHHHhhhcc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      |+||+|++|||.|.+.++|..|+++|+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            689999999999999999999999994

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=2.6e-09  Score=66.85  Aligned_cols=29  Identities=24%  Similarity=0.612  Sum_probs=20.1

Q ss_pred             hCCCCccccccCCCcccChhhHHHHHHHc
Q 037502          128 HSNHKQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       128 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      |+|+|||+|.+|+|.|.+.++|+.|+++|
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcccc
Confidence            56677777777777777777777776665

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.67  E-value=4.6e-09  Score=62.88  Aligned_cols=26  Identities=38%  Similarity=0.949  Sum_probs=24.8

Q ss_pred             CccccccCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||+|++||+.|.+.++|+.|+++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCccc
Confidence            58999999999999999999999994

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=7.1e-09  Score=61.36  Aligned_cols=27  Identities=26%  Similarity=0.533  Sum_probs=14.9

Q ss_pred             CCCeecc-CCcccCChhhHHHHHHHhcC
Q 037502          158 TRGHSCD-CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       158 ~kp~~C~-Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      ||||.|. |+|+|.+.++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4555553 55555555555555555543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=7.7e-09  Score=61.80  Aligned_cols=26  Identities=27%  Similarity=0.737  Sum_probs=24.8

Q ss_pred             CccccccCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||.|++||+.|.+.++|..|+++|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCccC
Confidence            68999999999999999999999994

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=6e-09  Score=60.20  Aligned_cols=25  Identities=32%  Similarity=0.704  Sum_probs=24.2

Q ss_pred             CccccccCCcccCCchhHHHHhhhc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |||+|++|||+|...++|..|+|+|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            6999999999999999999999998

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.57  E-value=8.2e-09  Score=69.21  Aligned_cols=36  Identities=22%  Similarity=0.494  Sum_probs=32.6

Q ss_pred             hccCccccCCCCcccccc--CCcccCCchhHHHHhhhcc
Q 037502           44 VSLSPKTLLESDRYVCEI--CNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        44 l~~h~~~h~~~~py~C~~--Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +..|++ |++++||+|+.  ||+.|...++|..|+++|+
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Ht   44 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhccccc
Confidence            666774 99999999987  9999999999999999994

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=1.6e-08  Score=63.59  Aligned_cols=33  Identities=24%  Similarity=0.648  Sum_probs=30.4

Q ss_pred             ccccc--CCcccCCchhHHHHhhhccCccccccccCccccCcceeCCC
Q 037502           57 YVCEI--CNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPE  102 (426)
Q Consensus        57 y~C~~--Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~  102 (426)
                      |.|+.  ||+.|.+.++|++|+++|             +|++||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~H-------------tgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLH-------------SDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHH-------------HTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCee-------------CCCCCEeCCC
Confidence            78876  999999999999999999             7999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.47  E-value=4e-08  Score=58.70  Aligned_cols=23  Identities=35%  Similarity=0.846  Sum_probs=9.6

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ||.|++||+.|.+.+.|++|+++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~   24 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRS   24 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHT
T ss_pred             cCCCCCCCCCCCCchHcccccCc
Confidence            34444444444444444444444

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=4.8e-08  Score=61.41  Aligned_cols=34  Identities=35%  Similarity=0.852  Sum_probs=26.5

Q ss_pred             eeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccc
Q 037502           98 FVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCE  137 (426)
Q Consensus        98 ~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~  137 (426)
                      |.|++.+|+     +.|.+...|+.| +++|+|+|||+|+
T Consensus         2 f~C~~~~C~-----k~F~~~~~L~~H-~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACG-----KSFNFKKHLKEH-MKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTC-----CEESSHHHHHHH-HHHHHTSCCCSCC
T ss_pred             eECCCCCCC-----CeeCChhHhccc-cCeeCCCCCEeCC
Confidence            678776655     888888888888 4778888888886

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=3.9e-08  Score=56.72  Aligned_cols=24  Identities=33%  Similarity=0.690  Sum_probs=12.2

Q ss_pred             CCeecc-CCcccCChhhHHHHHHHh
Q 037502          159 RGHSCD-CGRVFSRVESFIEHQDAC  182 (426)
Q Consensus       159 kp~~C~-Cgk~F~~~~~L~~H~r~h  182 (426)
                      |||.|+ |||+|...+.|.+|+|+|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            345553 555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=6.7e-08  Score=57.60  Aligned_cols=23  Identities=26%  Similarity=0.713  Sum_probs=9.7

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ||.|.+||+.|.+.++|..|+++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~   24 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKT   24 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHG
T ss_pred             CEECCcCCCeecchHHhhhhcCc
Confidence            34444444444444444444444

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1.6e-07  Score=56.41  Aligned_cols=27  Identities=22%  Similarity=0.429  Sum_probs=18.6

Q ss_pred             CCeecc---CCcccCChhhHHHHHHHhcCC
Q 037502          159 RGHSCD---CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       159 kp~~C~---Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      |||.|+   |||+|.+.++|.+|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            567773   777777777777777777654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.2e-07  Score=55.71  Aligned_cols=27  Identities=26%  Similarity=0.648  Sum_probs=16.3

Q ss_pred             CCeecc---CCcccCChhhHHHHHHHhcCC
Q 037502          159 RGHSCD---CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       159 kp~~C~---Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      |||.|+   ||++|.+.++|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            456662   666666666666666666553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.7e-07  Score=56.21  Aligned_cols=26  Identities=31%  Similarity=0.675  Sum_probs=24.6

Q ss_pred             Ccccccc--CCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCEI--CNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~~--Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||+|+.  |||.|.+.++|+.|+++|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCc
Confidence            6899988  9999999999999999994

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.7e-07  Score=56.28  Aligned_cols=26  Identities=35%  Similarity=0.721  Sum_probs=24.4

Q ss_pred             Ccccccc--CCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCEI--CNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~~--Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||+|+.  |||+|.+.++|+.|+++|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccccC
Confidence            6899987  9999999999999999994

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.5e-07  Score=55.30  Aligned_cols=26  Identities=35%  Similarity=0.857  Sum_probs=23.9

Q ss_pred             Cccccc--cCCcccCCchhHHHHhhhcc
Q 037502           55 DRYVCE--ICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        55 ~py~C~--~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +||+|+  .|||.|.+.++|+.|+++|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccc
Confidence            589995  69999999999999999994

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.19  E-value=1.4e-07  Score=63.08  Aligned_cols=28  Identities=21%  Similarity=0.528  Sum_probs=16.4

Q ss_pred             hCCCCcccccc--CCCcccChhhHHHHHHH
Q 037502          128 HSNHKQWVCEK--CSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       128 H~~~k~~~C~~--C~k~f~~~~~L~~H~~~  155 (426)
                      |+|++||.|.+  |++.|.+.+.|+.|+++
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~   42 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhccc
Confidence            55555555554  55555555555555555

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4e-07  Score=49.97  Aligned_cols=25  Identities=36%  Similarity=0.756  Sum_probs=23.3

Q ss_pred             ccccccCCcccCCchhHHHHhhhcc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      |++|+.|||.|+++..|++|+|.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            6799999999999999999999994

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=7.5e-07  Score=53.81  Aligned_cols=31  Identities=26%  Similarity=0.551  Sum_probs=20.0

Q ss_pred             cceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCC
Q 037502           96 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK  132 (426)
Q Consensus        96 k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k  132 (426)
                      +||+|++.+|+     +.|...++|..| +++|+|+|
T Consensus         1 kpf~C~~~~C~-----k~F~~~~~L~~H-~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCG-----KRFTRSDELQRH-KRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCC-----CBCSSHHHHHHH-HTTTSCCC
T ss_pred             CcCCCcCCCCC-----cCcCChhHhhhh-cCcccccC
Confidence            46677665554     677777777777 46676664

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.14  E-value=5.8e-07  Score=54.64  Aligned_cols=27  Identities=30%  Similarity=0.848  Sum_probs=25.4

Q ss_pred             CCcccccc--CCcccCCchhHHHHhhhcc
Q 037502           54 SDRYVCEI--CNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        54 ~~py~C~~--Cgk~F~~~~~L~~H~r~H~   80 (426)
                      |+||.|+.  |||.|.+.++|++|+++|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            58999988  9999999999999999994

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.11  E-value=8.4e-07  Score=53.90  Aligned_cols=27  Identities=33%  Similarity=0.725  Sum_probs=16.2

Q ss_pred             CCCeecc---CCcccCChhhHHHHHHHhcC
Q 037502          158 TRGHSCD---CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       158 ~kp~~C~---Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      ||||.|.   |+++|.+.++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            4566663   66666666666666666643

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=5.9e-07  Score=53.29  Aligned_cols=26  Identities=31%  Similarity=0.570  Sum_probs=18.0

Q ss_pred             CCeecc---CCcccCChhhHHHHHHHhcC
Q 037502          159 RGHSCD---CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       159 kp~~C~---Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      |||.|+   |+|+|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            567773   77777777777777777754

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=5e-07  Score=53.04  Aligned_cols=25  Identities=40%  Similarity=0.821  Sum_probs=23.5

Q ss_pred             Ccccccc--CCcccCCchhHHHHhhhc
Q 037502           55 DRYVCEI--CNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        55 ~py~C~~--Cgk~F~~~~~L~~H~r~H   79 (426)
                      +||+|+.  |||.|.+.++|+.|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            5899987  999999999999999998

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=8.3e-07  Score=52.07  Aligned_cols=25  Identities=20%  Similarity=0.449  Sum_probs=16.3

Q ss_pred             CCeecc---CCcccCChhhHHHHHHHhc
Q 037502          159 RGHSCD---CGRVFSRVESFIEHQDACS  183 (426)
Q Consensus       159 kp~~C~---Cgk~F~~~~~L~~H~r~h~  183 (426)
                      |||.|+   |||+|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            466663   6677766667777766663

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=2.4e-06  Score=46.84  Aligned_cols=23  Identities=35%  Similarity=0.888  Sum_probs=11.7

Q ss_pred             eecc-CCcccCChhhHHHHHHHhc
Q 037502          161 HSCD-CGRVFSRVESFIEHQDACS  183 (426)
Q Consensus       161 ~~C~-Cgk~F~~~~~L~~H~r~h~  183 (426)
                      ++|+ |++.|++++.|+.|+|.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            4454 5555555555555555543

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.89  E-value=3.1e-06  Score=50.09  Aligned_cols=29  Identities=28%  Similarity=0.626  Sum_probs=19.1

Q ss_pred             cceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCC
Q 037502           96 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSN  130 (426)
Q Consensus        96 k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~  130 (426)
                      |||+|++.||+     +.|.+.++|..| +++|+|
T Consensus         1 Kp~~C~~~gC~-----k~F~~~~~L~~H-~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCD-----RRFSRSADLTRH-IRIHTG   29 (29)
T ss_dssp             CCEECCSTTCC-----CEESSHHHHHHH-THHHHT
T ss_pred             CCeECCCCCCC-----cEECchhHhhhh-cCccCC
Confidence            46777776555     777777777777 466654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.87  E-value=3.3e-06  Score=47.78  Aligned_cols=25  Identities=28%  Similarity=0.640  Sum_probs=12.9

Q ss_pred             CccccccCCCcccChhhHHHHHHHc
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      |||.|++||+.|++....++|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555554443

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=3.7e-06  Score=47.58  Aligned_cols=26  Identities=27%  Similarity=0.756  Sum_probs=24.6

Q ss_pred             CCccccccCCcccCCchhHHHHhhhc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |+||.|++||+.|.+....++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            58999999999999999999999998

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=9e-06  Score=47.75  Aligned_cols=31  Identities=26%  Similarity=0.584  Sum_probs=27.9

Q ss_pred             CccccccCCcccCCchhHHHHhhhccCccccccccCccccCcce
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVF   98 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~   98 (426)
                      +...|+.|||.|.....|.+|...|             .++|||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklsh-------------s~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSH-------------SGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGS-------------CSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhccc-------------CCCCCC
Confidence            3578999999999999999999999             688887

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=3.5e-05  Score=44.18  Aligned_cols=25  Identities=16%  Similarity=0.456  Sum_probs=16.2

Q ss_pred             CCeecc---CCcccCChhhHHHHHHHhc
Q 037502          159 RGHSCD---CGRVFSRVESFIEHQDACS  183 (426)
Q Consensus       159 kp~~C~---Cgk~F~~~~~L~~H~r~h~  183 (426)
                      |||.|.   |+|+|...++|.+|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            466663   6666666667777766654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=7.3e-05  Score=42.81  Aligned_cols=24  Identities=42%  Similarity=0.834  Sum_probs=14.3

Q ss_pred             Ccccccc--CCCcccChhhHHHHHHH
Q 037502          132 KQWVCEK--CSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       132 k~~~C~~--C~k~f~~~~~L~~H~~~  155 (426)
                      |||.|.+  |+|+|.+.++|+.|+++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~   26 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHh
Confidence            4555544  66666666666666665

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=6.7e-05  Score=42.96  Aligned_cols=27  Identities=30%  Similarity=0.774  Sum_probs=25.3

Q ss_pred             CCccccccCCcccCCchhHHHHhhhcc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ++||.|++|+..|.++..+.-|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCCcccchHHHHhhccccceEeeeccc
Confidence            589999999999999999999999994

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00012  Score=40.80  Aligned_cols=25  Identities=28%  Similarity=0.567  Sum_probs=23.0

Q ss_pred             ccccccCCcccCCchhHHHHhhhcc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      .+.|..|||+|...+.|++|..+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTS
T ss_pred             cchHHHHhHHHHHHHHHHHHhhccc
Confidence            4689999999999999999999994

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00014  Score=42.57  Aligned_cols=22  Identities=23%  Similarity=0.513  Sum_probs=11.8

Q ss_pred             cccCCHHHHHHHHHhhhCCCCcc
Q 037502          112 HALGDLVGIKKHFRRKHSNHKQW  134 (426)
Q Consensus       112 ~~f~~~~~l~~H~~r~H~~~k~~  134 (426)
                      +.|.+...|.+| +..|+|+|||
T Consensus        13 k~frdvyhlnrh-klshs~ekpy   34 (35)
T d2epra1          13 KIFRDVYHLNRH-KLSHSGEKPY   34 (35)
T ss_dssp             EEESSHHHHHHH-GGGSCSCCCC
T ss_pred             HHHHHHHHHHhh-hcccCCCCCC
Confidence            555555555555 4455555554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.0002  Score=40.07  Aligned_cols=27  Identities=26%  Similarity=0.610  Sum_probs=25.1

Q ss_pred             CCccccccCCcccCCchhHHHHhhhcc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      ++||+|..|...-.+.+.|..|+|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCcceeeecccccCCchheEEeeeccc
Confidence            579999999999999999999999994

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00031  Score=40.16  Aligned_cols=28  Identities=25%  Similarity=0.468  Sum_probs=16.8

Q ss_pred             CCCeecc-CCcccCChhhHHHHHHHhcCC
Q 037502          158 TRGHSCD-CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       158 ~kp~~C~-Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      +|||.|. |+..|.+++-+.-|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            4566664 666666666666666666543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00023  Score=39.45  Aligned_cols=25  Identities=28%  Similarity=0.594  Sum_probs=24.1

Q ss_pred             CccccccCCcccCCchhHHHHhhhc
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      +||+|..|+.+-...++|..|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            6999999999999999999999999

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00029  Score=39.35  Aligned_cols=26  Identities=15%  Similarity=0.312  Sum_probs=12.6

Q ss_pred             CCeecc-CCcccCChhhHHHHHHHhcC
Q 037502          159 RGHSCD-CGRVFSRVESFIEHQDACSK  184 (426)
Q Consensus       159 kp~~C~-Cgk~F~~~~~L~~H~r~h~~  184 (426)
                      +||+|. |...-...+.|..|+|.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            444454 44444444555555555443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00052  Score=37.99  Aligned_cols=25  Identities=28%  Similarity=0.534  Sum_probs=16.6

Q ss_pred             CccccccCCCcccChhhHHHHHHHc
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      |||+|..|...-.+.++|+.|+++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            5666666666666666666666664

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00082  Score=37.71  Aligned_cols=27  Identities=26%  Similarity=0.496  Sum_probs=19.0

Q ss_pred             eeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCC
Q 037502           98 FVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK  132 (426)
Q Consensus        98 ~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k  132 (426)
                      |.|++||       ......+-|+.|+ +.|++++
T Consensus         2 YvC~~Cg-------~~C~KPSvL~KHI-RsHT~~R   28 (28)
T d1bboa1           2 YICEECG-------IRAKKPSMLKKHI-RTHTDVR   28 (28)
T ss_dssp             CBCTTTC-------CBCSSHHHHHHHH-HHTSSCC
T ss_pred             ccccccC-------cccCCHHHHHHHH-HHhcCCC
Confidence            6777777       6777777777774 6777654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.67  E-value=0.00049  Score=37.05  Aligned_cols=23  Identities=35%  Similarity=0.853  Sum_probs=22.2

Q ss_pred             cccccCCcccCCchhHHHHhhhc
Q 037502           57 YVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        57 y~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |+|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            78999999999999999999998

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.00044  Score=39.88  Aligned_cols=25  Identities=28%  Similarity=0.585  Sum_probs=18.7

Q ss_pred             CCeecc---CCcccCChhhHHHHH-HHhc
Q 037502          159 RGHSCD---CGRVFSRVESFIEHQ-DACS  183 (426)
Q Consensus       159 kp~~C~---Cgk~F~~~~~L~~H~-r~h~  183 (426)
                      |||.|+   |.|.|+..+...+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            577884   888888888888886 6664

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.51  E-value=0.00076  Score=37.74  Aligned_cols=24  Identities=21%  Similarity=0.415  Sum_probs=19.1

Q ss_pred             CCeecc---CCcccCChhhHHHHHHHh
Q 037502          159 RGHSCD---CGRVFSRVESFIEHQDAC  182 (426)
Q Consensus       159 kp~~C~---Cgk~F~~~~~L~~H~r~h  182 (426)
                      .||.|.   |++.|...+-|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            478883   888888888888888876

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.41  E-value=0.00084  Score=36.71  Aligned_cols=23  Identities=30%  Similarity=0.741  Sum_probs=21.7

Q ss_pred             ccccCCcccCCchhHHHHhhhcc
Q 037502           58 VCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        58 ~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      .|+.|.|.|.++..|+.|-|.|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~ht   24 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHT   24 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHS
T ss_pred             cCcchHHHHHHhHhhhhcccccc
Confidence            69999999999999999999994

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.0011  Score=37.10  Aligned_cols=25  Identities=32%  Similarity=0.700  Sum_probs=23.3

Q ss_pred             ccccccCCcccCCchhHHHHhhhcc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      .|.|+.||......+-|+.|+|+|+
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             CccccccCcccCCHHHHHHHHHHhc
Confidence            3899999999999999999999994

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0013  Score=37.01  Aligned_cols=26  Identities=35%  Similarity=0.563  Sum_probs=20.6

Q ss_pred             CccccccCCCcccChhhHHHHHHH-cC
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKT-CG  157 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~-h~  157 (426)
                      |||.|..|....++.++|+.|+++ |+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            578888888888888888888887 64

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0012  Score=37.10  Aligned_cols=26  Identities=27%  Similarity=0.548  Sum_probs=15.8

Q ss_pred             CccccccCCCcccChhhHHHHHHH-cC
Q 037502          132 KQWVCEKCSKGYAVQSDYKAHLKT-CG  157 (426)
Q Consensus       132 k~~~C~~C~k~f~~~~~L~~H~~~-h~  157 (426)
                      +||+|+.|...-.+.++|..|++. ||
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            356666666666666666666665 54

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.30  E-value=0.0008  Score=37.65  Aligned_cols=25  Identities=28%  Similarity=0.610  Sum_probs=22.6

Q ss_pred             Ccccccc--CCcccCCchhHHHHhhhc
Q 037502           55 DRYVCEI--CNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        55 ~py~C~~--Cgk~F~~~~~L~~H~r~H   79 (426)
                      .||+|..  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4899965  999999999999999987

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0015  Score=40.36  Aligned_cols=26  Identities=31%  Similarity=0.778  Sum_probs=16.7

Q ss_pred             CCCCeecc-CCcccCChhhHHHHHHHh
Q 037502          157 GTRGHSCD-CGRVFSRVESFIEHQDAC  182 (426)
Q Consensus       157 ~~kp~~C~-Cgk~F~~~~~L~~H~r~h  182 (426)
                      |-|||.|. |+|.|-..+++.+|.-.|
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhhh
Confidence            55666664 666666666666665544

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.25  E-value=0.0012  Score=35.55  Aligned_cols=22  Identities=27%  Similarity=0.572  Sum_probs=14.3

Q ss_pred             eecc-CCcccCChhhHHHHHHHh
Q 037502          161 HSCD-CGRVFSRVESFIEHQDAC  182 (426)
Q Consensus       161 ~~C~-Cgk~F~~~~~L~~H~r~h  182 (426)
                      |+|. |.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            4564 666666666666666665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.0022  Score=35.57  Aligned_cols=18  Identities=22%  Similarity=0.379  Sum_probs=9.3

Q ss_pred             cccCCHHHHHHHHHhhhCC
Q 037502          112 HALGDLVGIKKHFRRKHSN  130 (426)
Q Consensus       112 ~~f~~~~~l~~H~~r~H~~  130 (426)
                      +.|...+.|++| ..+|+|
T Consensus        10 kaf~essklkrh-~lvhtg   27 (28)
T d1ubdc2          10 KAFVESSKLKRH-QLVHTG   27 (28)
T ss_dssp             CEESSHHHHHHH-GGGTSC
T ss_pred             HHHHHHHHHHHH-hhcccC
Confidence            555555555555 344544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.00096  Score=37.43  Aligned_cols=24  Identities=33%  Similarity=0.699  Sum_probs=22.2

Q ss_pred             ccccccCCcccCCchhHHHHhhhc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      ||.|..|+-.|..+.+|..||+.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999754

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.0012  Score=40.79  Aligned_cols=28  Identities=21%  Similarity=0.470  Sum_probs=24.0

Q ss_pred             CCCCccccccCCcccCCchhHHHHhhhc
Q 037502           52 LESDRYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        52 ~~~~py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      +|-+||.|.+|+|.|-...++.+|.-..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            4678999999999999999999996443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.002  Score=36.31  Aligned_cols=30  Identities=27%  Similarity=0.480  Sum_probs=25.6

Q ss_pred             cceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCC
Q 037502           96 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK  132 (426)
Q Consensus        96 k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k  132 (426)
                      +||.|..|.       ....+.++|+.|+...|+.++
T Consensus         1 kpy~cqyc~-------yrsadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCE-------FRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSS-------CCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccc-------cccccchhhhhhhhcccccCC
Confidence            589999988       777899999999988887654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0016  Score=36.50  Aligned_cols=23  Identities=17%  Similarity=0.619  Sum_probs=11.5

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ||.|..|..+|..+.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            34455555555555555555544

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.04  E-value=0.0015  Score=40.03  Aligned_cols=27  Identities=30%  Similarity=0.674  Sum_probs=24.8

Q ss_pred             CCccccccCCcccCCchhHHHHhhhcc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      .+.|+|.+|++.|.+-..|--||+.|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhc
Confidence            457999999999999999999999994

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.59  E-value=0.0036  Score=34.97  Aligned_cols=27  Identities=26%  Similarity=0.754  Sum_probs=24.6

Q ss_pred             CCccccccCCcccCCchhHHHHhhhcc
Q 037502           54 SDRYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        54 ~~py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      +..|.|..|...|.+...|+.||..|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeeccc
Confidence            356999999999999999999999994

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0028  Score=36.44  Aligned_cols=30  Identities=30%  Similarity=0.608  Sum_probs=17.0

Q ss_pred             cceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCC
Q 037502           96 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSN  130 (426)
Q Consensus        96 k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~  130 (426)
                      +||.|...||.     +.|.+.+.-.+|.-|+|..
T Consensus         1 kPY~C~~~gC~-----KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCS-----KAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCC-----CEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChh-----hhhcchhhhhhhccccccC
Confidence            45666665555     6666666655663355543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.45  E-value=0.0034  Score=33.71  Aligned_cols=23  Identities=35%  Similarity=0.654  Sum_probs=21.0

Q ss_pred             CccccccCCcccCCchhHHHHhh
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRR   77 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r   77 (426)
                      .||+|..|...|-.+..|+.||-
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            38999999999999999999984

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.0051  Score=37.37  Aligned_cols=27  Identities=19%  Similarity=0.534  Sum_probs=22.5

Q ss_pred             CCCCeecc---CCcccCChhhHHHHHHHhc
Q 037502          157 GTRGHSCD---CGRVFSRVESFIEHQDACS  183 (426)
Q Consensus       157 ~~kp~~C~---Cgk~F~~~~~L~~H~r~h~  183 (426)
                      .+|||.|.   |+.+|...+.|..|.+.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            36888883   9999999999999988874

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.35  E-value=0.0036  Score=35.96  Aligned_cols=23  Identities=13%  Similarity=0.460  Sum_probs=11.1

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      ||.|.+|++.|++..-|.+|...
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            34455555555554444444444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.0089  Score=33.49  Aligned_cols=27  Identities=26%  Similarity=0.404  Sum_probs=23.7

Q ss_pred             cceeCCCCCCCCCCcccccCCHHHHHHHHHhhhC
Q 037502           96 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHS  129 (426)
Q Consensus        96 k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~  129 (426)
                      +||+|..|+       ......++|..|+.+.|.
T Consensus         1 rPFkC~~Cs-------FDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCS-------FDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSS-------CEESSHHHHHHHHHHHHS
T ss_pred             CCcccceec-------ccccCcchHHHHHHHHcc
Confidence            589999998       888999999999877774

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.08  E-value=0.0077  Score=33.72  Aligned_cols=27  Identities=15%  Similarity=0.454  Sum_probs=19.5

Q ss_pred             CCeecc---CCcccCChhhHHHHHHHhcCC
Q 037502          159 RGHSCD---CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       159 kp~~C~---Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      +||.|.   |.|.|.....|.+|.-+|+++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            567772   788887777787777777653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.99  E-value=0.008  Score=34.48  Aligned_cols=28  Identities=18%  Similarity=0.234  Sum_probs=25.5

Q ss_pred             ceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           97 VFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        97 ~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      ||.|.+|+       +.|.+.+-|.+|.++.|.|.
T Consensus         1 Pf~C~~C~-------R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCN-------RAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTC-------CEESSHHHHHHHHTTTSCCS
T ss_pred             Cccccccc-------chhhHHHHHHHHHHHHhcCc
Confidence            69999999       99999999999988888764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.013  Score=35.53  Aligned_cols=29  Identities=24%  Similarity=0.603  Sum_probs=22.8

Q ss_pred             cCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhh
Q 037502           94 RKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKH  128 (426)
Q Consensus        94 ~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H  128 (426)
                      .+|||.|...||.     ..|.+...|..| +..|
T Consensus         3 ddkPF~C~~pGC~-----q~F~neDhL~vH-k~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCG-----QRFTNEDHLAVH-KHKH   31 (38)
T ss_dssp             TCCCEECCCTTTC-----CEESSHHHHHHH-HHHH
T ss_pred             CCCceecCCCCcc-----ccccchHHHHHh-hhhh
Confidence            4788888888877     888888888888 4555

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.76  E-value=0.0096  Score=32.67  Aligned_cols=22  Identities=27%  Similarity=0.560  Sum_probs=13.0

Q ss_pred             ccccccCCCcccChhhHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLK  154 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~  154 (426)
                      ||+|..|||.|-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4566666666666666665543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.70  E-value=0.014  Score=35.63  Aligned_cols=24  Identities=13%  Similarity=0.516  Sum_probs=11.4

Q ss_pred             ccccccCCCcccChhhHHHHHHHc
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      .|+|.+|++.|.....|-.|++.|
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTT
T ss_pred             ccCCCCCCCccCCcccccchHhhh
Confidence            344444444444444444444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.68  E-value=0.01  Score=33.24  Aligned_cols=30  Identities=23%  Similarity=0.555  Sum_probs=21.2

Q ss_pred             cceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           96 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        96 k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      +||.|.+-||.     +.|.....|.+| ..+|+|+
T Consensus         1 ~pfpc~~egc~-----kgf~tlhhltrh-s~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCE-----KGFTSLHHLTRH-SLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCC-----CEESSTTHHHHH-HHHHHTC
T ss_pred             CCcCccccccc-----ccchhhhhhhhh-hccccCC
Confidence            46777777766     777777777777 4567664

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.29  E-value=0.022  Score=30.95  Aligned_cols=20  Identities=30%  Similarity=0.353  Sum_probs=11.3

Q ss_pred             cccCCHHHHHHHHHhhhCCCC
Q 037502          112 HALGDLVGIKKHFRRKHSNHK  132 (426)
Q Consensus       112 ~~f~~~~~l~~H~~r~H~~~k  132 (426)
                      +.|..+..|+-| -+.|+|+|
T Consensus         8 k~f~skyylkvh-nr~htgek   27 (27)
T d2dlqa4           8 KKFLSKYYLKVH-NRKHTGEK   27 (27)
T ss_dssp             CCCSSHHHHHHH-HHHHSSCC
T ss_pred             HHHHHhHhhhhc-cccccCCC
Confidence            556666666666 35555553

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.23  E-value=0.015  Score=31.07  Aligned_cols=21  Identities=24%  Similarity=0.774  Sum_probs=10.8

Q ss_pred             ccccccCCCcccChhhHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHL  153 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~  153 (426)
                      ||+|.-|...|-++.+|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            455555555555555555554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.80  E-value=0.015  Score=31.87  Aligned_cols=24  Identities=29%  Similarity=0.666  Sum_probs=20.9

Q ss_pred             ccccccCCcccCCchhHHHHhhhc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      ||+|..|||.|-++.+|..|..+.
T Consensus         1 pf~c~kcgkcyfrkenllehearn   24 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEARN   24 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHC
T ss_pred             CCccccchhhhhhHhHHHHHHHHh
Confidence            689999999999999999997543

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.63  E-value=0.022  Score=33.36  Aligned_cols=26  Identities=31%  Similarity=0.860  Sum_probs=18.7

Q ss_pred             Ceecc-CCcccCChhhHHHHHHHhcCC
Q 037502          160 GHSCD-CGRVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       160 p~~C~-Cgk~F~~~~~L~~H~r~h~~~  185 (426)
                      .|.|. |||+|.+...+.+|-..|.+.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            36774 888888877788887777653

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.03  Score=33.11  Aligned_cols=33  Identities=21%  Similarity=0.377  Sum_probs=23.5

Q ss_pred             cceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           96 RVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        96 k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      +.|.|.|-+|...+  +.|.....|..| +|+|+||
T Consensus         1 k~y~C~W~~C~R~~--~pf~a~YkLv~H-~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSREL--RPFKAQYMLVVH-MRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTT--CCCSSHHHHHHH-THHHHCC
T ss_pred             CCeEEECCCCCCCC--CcchhHHHHHHH-HhhcCCC
Confidence            35778877765333  678888888888 4788875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.36  E-value=0.041  Score=30.59  Aligned_cols=29  Identities=17%  Similarity=0.399  Sum_probs=19.4

Q ss_pred             CcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCC
Q 037502           95 KRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH  131 (426)
Q Consensus        95 ~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~  131 (426)
                      +..|.|..|.       ..|.+...|..| +..|+|+
T Consensus         2 eqvftcs~cq-------e~f~rrmelr~h-mvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQ-------ETFRRRMELRLH-MVSHTGE   30 (30)
T ss_dssp             CCCEECSSSC-------CEESSHHHHHHH-HHHHSSS
T ss_pred             cceEEeHHHH-------HHHHHHHhheee-eecccCC
Confidence            3467777766       777777777777 4666664

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.77  E-value=0.034  Score=32.50  Aligned_cols=23  Identities=26%  Similarity=0.673  Sum_probs=20.4

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      .|.|..|||.|.+...+.+|-..
T Consensus         4 afvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhhh
Confidence            48899999999999999999877

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.32  E-value=0.043  Score=34.85  Aligned_cols=26  Identities=19%  Similarity=0.383  Sum_probs=17.4

Q ss_pred             ccccccCCCcccChhhHHHHHHHcCC
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKTCGT  158 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~h~~  158 (426)
                      -|.|-.|||.|.....|+.|...||.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            36677777777777777777665544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.89  E-value=0.053  Score=29.75  Aligned_cols=23  Identities=30%  Similarity=0.589  Sum_probs=19.4

Q ss_pred             cccccCCCcccChhhHHHHHHH-c
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKT-C  156 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~-h  156 (426)
                      |.|+.|+....++++|..|++. |
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            7888888888888888888887 5

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.73  E-value=0.049  Score=29.97  Aligned_cols=24  Identities=25%  Similarity=0.510  Sum_probs=22.5

Q ss_pred             ccccccCCcccCCchhHHHHhhhc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      |-+|..|..+..++..|+.|.|+|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            568999999999999999999999

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.54  E-value=0.091  Score=28.06  Aligned_cols=24  Identities=17%  Similarity=0.303  Sum_probs=13.7

Q ss_pred             eeCCCCCCCCCCcccccCCHHHHHHHHHhhh
Q 037502           98 FVCPEPSCLHHDPCHALGDLVGIKKHFRRKH  128 (426)
Q Consensus        98 ~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H  128 (426)
                      |.|+.|-       +.|.++.++..|.+.+|
T Consensus         2 ypcp~cf-------keftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCF-------KEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTC-------CEESCHHHHHHHHHHHT
T ss_pred             cCCchhh-------HHhccccCceEEEEEec
Confidence            5566655       66666666666654333

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.19  E-value=0.065  Score=29.16  Aligned_cols=23  Identities=26%  Similarity=0.642  Sum_probs=15.9

Q ss_pred             eec--c-CCcccCChhhHHHHHHHhc
Q 037502          161 HSC--D-CGRVFSRVESFIEHQDACS  183 (426)
Q Consensus       161 ~~C--~-Cgk~F~~~~~L~~H~r~h~  183 (426)
                      |.|  + |++.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            566  2 7777777777777776663

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.95  E-value=0.073  Score=28.47  Aligned_cols=22  Identities=27%  Similarity=0.632  Sum_probs=18.5

Q ss_pred             cccccCCCcccChhhHHHHHHH
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      |.|+.|-|.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888888876

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.46  E-value=0.058  Score=34.22  Aligned_cols=25  Identities=24%  Similarity=0.581  Sum_probs=23.0

Q ss_pred             ccccccCCcccCCchhHHHHhhhcc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRHK   80 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H~   80 (426)
                      -|.|..|||.|.....|+.|..-|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5899999999999999999998883

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.26  E-value=0.1  Score=30.74  Aligned_cols=19  Identities=16%  Similarity=0.167  Sum_probs=13.7

Q ss_pred             cccCChhhHHHHHHHhcCC
Q 037502          167 RVFSRVESFIEHQDACSKG  185 (426)
Q Consensus       167 k~F~~~~~L~~H~r~h~~~  185 (426)
                      +.|.....|..|+|.|+++
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4577777778888877764

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.84  E-value=0.11  Score=28.41  Aligned_cols=24  Identities=25%  Similarity=0.700  Sum_probs=21.6

Q ss_pred             ccccccCCcccCCchhHHHHhhhc
Q 037502           56 RYVCEICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        56 py~C~~Cgk~F~~~~~L~~H~r~H   79 (426)
                      .|.|+.|+-...+++.|..|++.-
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            489999999999999999999854

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.00  E-value=0.16  Score=27.89  Aligned_cols=23  Identities=17%  Similarity=0.388  Sum_probs=13.9

Q ss_pred             cccccCCCcccChhhHHHHHHHc
Q 037502          134 WVCEKCSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       134 ~~C~~C~k~f~~~~~L~~H~~~h  156 (426)
                      -+|..|..+.+.+..|+.|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            45666666666666666666553

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.85  E-value=0.12  Score=31.46  Aligned_cols=27  Identities=22%  Similarity=0.533  Sum_probs=21.2

Q ss_pred             CcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCc
Q 037502           95 KRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKG  142 (426)
Q Consensus        95 ~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~  142 (426)
                      ++.|.|++||       .              ++.|+-|-+|++||..
T Consensus         3 ~~~~~C~vCG-------~--------------i~~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           3 KKVYICPICG-------Y--------------TAVDEAPEYCPVCGAP   29 (37)
T ss_dssp             SCEEECTTTC-------C--------------EEESCCCSBCTTTCCB
T ss_pred             CcEEECCCCC-------C--------------EecCCCCCcCCCCCCc
Confidence            5689999998       2              3557888999999854

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=86.82  E-value=0.12  Score=31.26  Aligned_cols=28  Identities=18%  Similarity=0.382  Sum_probs=21.8

Q ss_pred             cCcceeCCCCCCCCCCcccccCCHHHHHHHHHhhhCCCCccccccCCCc
Q 037502           94 RKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKG  142 (426)
Q Consensus        94 ~~k~~~C~~C~c~~~~~~~~f~~~~~l~~H~~r~H~~~k~~~C~~C~k~  142 (426)
                      .++.|.|++||                     -+|.|+-|-+|++||..
T Consensus         2 ~~~~~vC~vCG---------------------yi~~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           2 DDKFHLCPICG---------------------YIHKGEDFEKCPICFRP   29 (36)
T ss_dssp             SCCEEECSSSC---------------------CEEESSCCSBCTTTCCB
T ss_pred             CCCEEECCCCC---------------------CEeeCCCCCcCCCCCCc
Confidence            36789999998                     23667888999999853

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.21  E-value=0.22  Score=26.97  Aligned_cols=22  Identities=27%  Similarity=0.723  Sum_probs=15.7

Q ss_pred             cccc--cCCCcccChhhHHHHHHH
Q 037502          134 WVCE--KCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       134 ~~C~--~C~k~f~~~~~L~~H~~~  155 (426)
                      |.|.  .|+|.|.....|+.|+-+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~   25 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFS   25 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeec
Confidence            4553  388888888888887765

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.19  E-value=0.26  Score=27.04  Aligned_cols=18  Identities=33%  Similarity=0.571  Sum_probs=9.2

Q ss_pred             CCCcccChhhHHHHHHHc
Q 037502          139 CSKGYAVQSDYKAHLKTC  156 (426)
Q Consensus       139 C~k~f~~~~~L~~H~~~h  156 (426)
                      |+|.|.+.+.++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            555555555555555444

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.40  E-value=0.23  Score=27.27  Aligned_cols=19  Identities=21%  Similarity=0.508  Sum_probs=17.9

Q ss_pred             cCCcccCCchhHHHHhhhc
Q 037502           61 ICNQGFQRDQNLQMHRRRH   79 (426)
Q Consensus        61 ~Cgk~F~~~~~L~~H~r~H   79 (426)
                      -|+|.|...+.++.|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            4999999999999999998

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.32  E-value=0.37  Score=28.08  Aligned_cols=23  Identities=30%  Similarity=0.632  Sum_probs=11.6

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      .|.|.+|.+.|...+++-+|.-+
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHHHh
Confidence            45555555555555555555444

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.21  E-value=0.4  Score=27.54  Aligned_cols=24  Identities=25%  Similarity=0.623  Sum_probs=21.0

Q ss_pred             CccccccCCcccCCchhHHHHhhh
Q 037502           55 DRYVCEICNQGFQRDQNLQMHRRR   78 (426)
Q Consensus        55 ~py~C~~Cgk~F~~~~~L~~H~r~   78 (426)
                      -.|.|.-||-.|.+.+.|..|+.-
T Consensus         7 arf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             cceeccccceeecChhHHHhhhhe
Confidence            359999999999999999998753

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.46  E-value=0.21  Score=34.58  Aligned_cols=23  Identities=17%  Similarity=0.530  Sum_probs=13.8

Q ss_pred             ccccccCCCcccChhhHHHHHHH
Q 037502          133 QWVCEKCSKGYAVQSDYKAHLKT  155 (426)
Q Consensus       133 ~~~C~~C~k~f~~~~~L~~H~~~  155 (426)
                      .|-|..|+|.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            35666666666666666666544

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.30  E-value=0.66  Score=31.42  Aligned_cols=37  Identities=16%  Similarity=0.332  Sum_probs=25.9

Q ss_pred             CCCCccccccCCcccCCchhHHHHhhhccCccccccccCccccCcceeCCCCC
Q 037502           52 LESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPS  104 (426)
Q Consensus        52 ~~~~py~C~~Cgk~F~~~~~L~~H~r~H~~~~~~~~~~~~~~~~k~~~C~~C~  104 (426)
                      +...-|+|+.|++.|.....++.   .-             .....|.|..|+
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L---~d-------------~~~~~F~C~~C~   46 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL---FD-------------PMTGTFRCTFCH   46 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH---EE-------------TTTTEEBCSSSC
T ss_pred             ccCCceECCCCCCCcchhhHHHh---cC-------------cCCCeEEecCCC
Confidence            44567999999999976554432   22             345679999987