Citrus Sinensis ID: 037529

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130---
MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDSHFFNALESDNPC
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHcccEEcccccccccccEEccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccc
MIVSVILALFLPCAGMSLVFIVYLSLLWCA*************************ELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLD*************
xxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MIVSVILALFLPCAGMSLVFIVYLSLLWCASNDNDNNGDVRLPVKAAAEGGLSASELDKLPKISGKELVMGTECAVCLDEVESEQPARLVPGCNHGFHLQCADSWLSKHSVCPVCRAKLDSHFFNALESDNPC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
E3 ubiquitin-protein ligase ATL23 E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8, UBC10, UBC11, UBC28 and UBC29 in vitro.probableQ8L9W3

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2L0B, chain A
Confidence level:very confident
Coverage over the Query: 43-121
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
2l8s, chain Aprobable Alignment | Template Structure