Citrus Sinensis ID: 037588

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
MAMGTFAKASMAMIALTWPAFFQGLLFTVYANADFDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGTEIAAETAAAMASASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLASHPLSN
ccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccHHHHHHHHHHccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcEcEcccccccccccccEcccccHHHcccccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHcccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHccccHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccEEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHcccccccccccccccccHHHcccccccccccccEcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccc
MAMGTFAKASMAMIALTWPAFFQGLLFTVyanadfdykdALGKSIIFLEaqrsgrlpprhrpawrgdsgledgkqanVDLVGgyydagdnvkyglpmAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLktssrknklyvqvgdpvqdhqcwarpeemktprtvlmidsktpgtEIAAETAAAMASASIVfrgvdrpysrrLLNKAKLLFHFAnshkgtydgecpfycsysgynDELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQadsyvcsvlpespyhqvymtpgglihyrdganaqyVTGTALLFSIYADVLAKhnqkitcgdqqfgsSQLMAFAKKQMDYLlganprgrsymvgfgkdpptrahhrgasvplenvnsgvscpmSFVNFFlknmpnpneltgaivggpdkhdnfnderwdgpmtepctyvNSLAIGVLAKLASHPLSN
MAMGTFAKASMAMIALTWPAFFQGLLFTVYANADFDYKDALGKSIIFLeaqrsgrlpprhrpawrgdsgledgkqANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGdpvqdhqcwarpeemktprtVLMIDSKTPGTEIAAETAAAMASASIVFRGVDRPYSRRLLNKAKLLFHFanshkgtydgECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLASHPLSN
MAMGTFAKASMAMIALTWPAFFQGLLFTVYANADFDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGteiaaetaaamasasiVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLASHPLSN
******AKASMAMIALTWPAFFQGLLFTVYANADFDYKDALGKSIIFLEA*************************ANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWAR********TVLMI********IAAETAAAMASASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGF******************NVNSGVSCPMSFVNFFLKNMPNPNELTGAIVGG******FNDERWDGPMTEPCTYVNSLAIGVLAKL*******
*********SMAMIALTWPAFFQGLLFTVYANADFDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGTEIAAETAAAMASASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLASHP***
MAMGTFAKASMAMIALTWPAFFQGLLFTVYANADFDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGTEIAAETAAAMASASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLASHPLSN
***GTFAKASMAMIALTWPAFFQGLLFTVYANADFDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGTEIAAETAAAMASASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLASH****
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAMGTFAKASMAMIALTWPAFFQGLLFTVYANADFDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGTEIAAETAAAMASASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLASHPLSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query493 2.2.26 [Sep-21-2011]
Q8VYG3486 Endoglucanase 16 OS=Arabi yes no 0.941 0.954 0.706 0.0
Q6K7G9501 Endoglucanase 8 OS=Oryza yes no 0.914 0.900 0.657 1e-178
P22503496 Endoglucanase OS=Phaseolu N/A no 0.916 0.911 0.5 1e-128
Q8LQ92499 Endoglucanase 3 OS=Oryza no no 0.916 0.905 0.490 1e-124
O81416516 Endoglucanase 17 OS=Arabi no no 0.916 0.875 0.498 1e-121
Q9SRX3501 Endoglucanase 1 OS=Arabid no no 0.910 0.896 0.510 1e-121
Q6YXT7523 Endoglucanase 19 OS=Oryza no no 0.912 0.860 0.474 1e-121
Q6ZA06516 Endoglucanase 20 OS=Oryza no no 0.892 0.852 0.489 1e-120
Q8L7I0 626 Endoglucanase 19 OS=Arabi no no 0.916 0.722 0.488 1e-120
Q9SZ90478 Endoglucanase 18 OS=Arabi no no 0.912 0.941 0.498 1e-118
>sp|Q8VYG3|GUN16_ARATH Endoglucanase 16 OS=Arabidopsis thaliana GN=At3g43860 PE=2 SV=1 Back     alignment and function desciption
 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/466 (70%), Positives = 383/466 (82%), Gaps = 2/466 (0%)

Query: 24  GLLFTVYANADF-DYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVG 82
           G++  V  N  F +YKDAL KS+IFLEAQRSG+LPP +R  WRGDS L+DGK  NVDL G
Sbjct: 21  GIINIVCVNGTFINYKDALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLVNVDLSG 80

Query: 83  GYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRK 142
           GYYDAGDNVKYGLPMAFTI+TL+ S + Y +EL++ GEL+N   AIRWGTDYFLK +SRK
Sbjct: 81  GYYDAGDNVKYGLPMAFTITTLAWSTITYEKELRATGELENARAAIRWGTDYFLKCASRK 140

Query: 143 NKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGTEIAAETAAAMASASIVFRGVD 202
           N+LYVQVGDP  DHQCWARPE MKTPRTVL I  K PGTEIAAE AAA A++SIVFR VD
Sbjct: 141 NRLYVQVGDPNADHQCWARPENMKTPRTVLEISDKVPGTEIAAEAAAAFAASSIVFRHVD 200

Query: 203 RPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLE 262
             Y+RRLLNKAKLLF  A SHKGTYDGECPFYCS SGYNDEL+WAATWLY ATRN  YL 
Sbjct: 201 HKYARRLLNKAKLLFKLAKSHKGTYDGECPFYCSNSGYNDELIWAATWLYKATRNHLYLS 260

Query: 263 YIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYH 322
           Y+K ++ISA VAEFSWDLKYAGAQIL++++ FE G + L  +K QADS+VCS LP SPYH
Sbjct: 261 YLKFEAISAYVAEFSWDLKYAGAQILITKLIFE-GHKGLDLYKQQADSFVCSNLPGSPYH 319

Query: 323 QVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKK 382
           QV+ TPGG+IH RDGAN+QYVT TA LFS YAD+L KHNQKI+CG  QF S+ LMAFAKK
Sbjct: 320 QVFTTPGGMIHLRDGANSQYVTATAFLFSAYADILQKHNQKISCGSHQFDSTHLMAFAKK 379

Query: 383 QMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPNP 442
           Q+DY+LG NP+GRSYMVGFG +PP +AHHRGASVP+   N+ +SCP+SFV ++ KN+PN 
Sbjct: 380 QIDYILGHNPQGRSYMVGFGPNPPKQAHHRGASVPMHEANAPLSCPLSFVKWYNKNVPNA 439

Query: 443 NELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLAS 488
           NELTGAI+GGPD+ D F D RW    TEPCTY+NS+A+GVLAKLA+
Sbjct: 440 NELTGAILGGPDRQDKFQDLRWTSVYTEPCTYINSIAVGVLAKLAA 485

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q6K7G9|GUN8_ORYSJ Endoglucanase 8 OS=Oryza sativa subsp. japonica GN=Os02g0778600 PE=2 SV=1 Back     alignment and function description
>sp|P22503|GUN_PHAVU Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function description
>sp|Q8LQ92|GUN3_ORYSJ Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1 Back     alignment and function description
>sp|O81416|GUN17_ARATH Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1 Back     alignment and function description
>sp|Q9SRX3|GUN1_ARATH Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1 Back     alignment and function description
>sp|Q6YXT7|GUN19_ORYSJ Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZA06|GUN20_ORYSJ Endoglucanase 20 OS=Oryza sativa subsp. japonica GN=GLU15 PE=2 SV=1 Back     alignment and function description
>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1 Back     alignment and function description
>sp|Q9SZ90|GUN18_ARATH Endoglucanase 18 OS=Arabidopsis thaliana GN=At4g09740 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
359475982486 PREDICTED: endoglucanase 16-like [Vitis 0.981 0.995 0.728 0.0
296081725 972 unnamed protein product [Vitis vinifera] 0.963 0.488 0.730 0.0
147857680468 hypothetical protein VITISV_008555 [Viti 0.924 0.974 0.748 0.0
449453059492 PREDICTED: endoglucanase 16-like [Cucumi 0.945 0.947 0.708 0.0
359475980487 PREDICTED: endoglucanase 16 [Vitis vinif 0.961 0.973 0.696 0.0
255550197484 endo-1,4-beta-glucanase, putative [Ricin 0.979 0.997 0.685 0.0
224088722470 predicted protein [Populus trichocarpa] 0.914 0.959 0.716 0.0
30691701486 endoglucanase 16 [Arabidopsis thaliana] 0.941 0.954 0.706 0.0
297815492488 glycosyl hydrolase family 9 protein [Ara 0.941 0.950 0.703 0.0
7362786483 cellulase-like protein [Arabidopsis thal 0.935 0.954 0.703 0.0
>gi|359475982|ref|XP_002280120.2| PREDICTED: endoglucanase 16-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/487 (72%), Positives = 413/487 (84%), Gaps = 3/487 (0%)

Query: 3   MGTFAKASMAMIALTWPAFFQGLLFTVYANADFDYKDALGKSIIFLEAQRSGRLPPRHRP 62
           MG F +AS A IA+ W A F+G  F +   +D +YKDAL KS+IFLEAQRSG+LP  +R 
Sbjct: 1   MGMFVRASAA-IAVAWLALFEGF-FGLVNGSDINYKDALTKSLIFLEAQRSGKLPANNRL 58

Query: 63  AWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQ 122
            WRGDS LEDGK  N DLVGGYYDAGDNVKYGLPMAFT++TLS SA++Y  ELK+ GEL+
Sbjct: 59  PWRGDSALEDGKLVNADLVGGYYDAGDNVKYGLPMAFTVTTLSWSAIFYESELKATGELE 118

Query: 123 NVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGTE 182
           N+ DAI+WGTDYFLK   RKN+LYVQVGDPVQDHQCW RPE M+TPRTVLMID K PGTE
Sbjct: 119 NMRDAIKWGTDYFLKAYPRKNRLYVQVGDPVQDHQCWMRPENMETPRTVLMIDDKMPGTE 178

Query: 183 IAAETAAAMASASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYND 242
           IAAET+AAMAS+SIVFRGVDR Y+RRLLNKAKLLF FA +HKGTYDGECPFYCS+SGYND
Sbjct: 179 IAAETSAAMASSSIVFRGVDRAYARRLLNKAKLLFEFAKAHKGTYDGECPFYCSFSGYND 238

Query: 243 ELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALA 302
           ELLWAATWLY+ATR P YL+YI+E+SISA VAEFSWDLKYAGAQILLS+ +FE G++ L 
Sbjct: 239 ELLWAATWLYIATRKPKYLKYIQEESISASVAEFSWDLKYAGAQILLSKFYFE-GEKGLE 297

Query: 303 NFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQ 362
            FKNQADS++CSVLP+SPYHQ+Y+TPGG++H RDGAN QYVTGTA LF++Y+++LA+ NQ
Sbjct: 298 TFKNQADSFICSVLPDSPYHQIYLTPGGMVHLRDGANTQYVTGTAHLFAVYSNILAQFNQ 357

Query: 363 KITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVN 422
           K+ CG QQF  + LMAFAK+QMDYLLG NP GRSYMVGFG +PPT+AHHRGASVP     
Sbjct: 358 KVVCGGQQFDHTHLMAFAKQQMDYLLGKNPEGRSYMVGFGNNPPTQAHHRGASVPKLPQG 417

Query: 423 SGVSCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGV 482
           S VSC MSFV +F KN  NPNELTGAI+GGPD++DNF+D+RWD   TEPCTYVNSLA+GV
Sbjct: 418 STVSCAMSFVYWFNKNDANPNELTGAILGGPDRNDNFDDKRWDSSKTEPCTYVNSLAVGV 477

Query: 483 LAKLASH 489
           L+ LA H
Sbjct: 478 LSHLAMH 484

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296081725|emb|CBI20730.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147857680|emb|CAN82881.1| hypothetical protein VITISV_008555 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449453059|ref|XP_004144276.1| PREDICTED: endoglucanase 16-like [Cucumis sativus] gi|449489398|ref|XP_004158300.1| PREDICTED: endoglucanase 16-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359475980|ref|XP_002280101.2| PREDICTED: endoglucanase 16 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255550197|ref|XP_002516149.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223544635|gb|EEF46151.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224088722|ref|XP_002308519.1| predicted protein [Populus trichocarpa] gi|222854495|gb|EEE92042.1| predicted protein [Populus trichocarpa] gi|347466557|gb|AEO97191.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466611|gb|AEO97218.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|429326580|gb|AFZ78630.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|30691701|ref|NP_189972.2| endoglucanase 16 [Arabidopsis thaliana] gi|75161476|sp|Q8VYG3.1|GUN16_ARATH RecName: Full=Endoglucanase 16; AltName: Full=Endo-1,4-beta glucanase 16; Flags: Precursor gi|18175751|gb|AAL59921.1| putative cellulase [Arabidopsis thaliana] gi|332644315|gb|AEE77836.1| endoglucanase 16 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297815492|ref|XP_002875629.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp. lyrata] gi|297321467|gb|EFH51888.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|7362786|emb|CAB83158.1| cellulase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
TAIR|locus:2101099486 GH9A4 "glycosyl hydrolase 9A4" 0.941 0.954 0.680 3.1e-177
TAIR|locus:2118519478 GH9B14 "glycosyl hydrolase 9B1 0.933 0.962 0.474 2.8e-114
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.906 0.892 0.493 1.2e-113
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.933 0.960 0.467 8.4e-113
TAIR|locus:2137824516 GH9B13 "glycosyl hydrolase 9B1 0.916 0.875 0.477 5.9e-112
TAIR|locus:2136073 626 GH9C3 "glycosyl hydrolase 9C3" 0.916 0.722 0.464 6.1e-110
TAIR|locus:2014205 620 GH9C2 "glycosyl hydrolase 9C2" 0.963 0.766 0.445 1.7e-107
TAIR|locus:2017704484 CEL5 "cellulase 5" [Arabidopsi 0.947 0.964 0.452 8.3e-106
TAIR|locus:2825314484 CEL3 "cellulase 3" [Arabidopsi 0.943 0.960 0.448 2.2e-105
TAIR|locus:2059375525 GH9B8 "glycosyl hydrolase 9B8" 0.916 0.860 0.434 1.2e-104
TAIR|locus:2101099 GH9A4 "glycosyl hydrolase 9A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1721 (610.9 bits), Expect = 3.1e-177, P = 3.1e-177
 Identities = 317/466 (68%), Positives = 369/466 (79%)

Query:    24 GLLFTVYANADF-DYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVG 82
             G++  V  N  F +YKDAL KS+IFLEAQRSG+LPP +R  WRGDS L+DGK  NVDL G
Sbjct:    21 GIINIVCVNGTFINYKDALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLVNVDLSG 80

Query:    83 GYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRK 142
             GYYDAGDNVKYGLPMAFTI+TL+ S + Y +EL++ GEL+N   AIRWGTDYFLK +SRK
Sbjct:    81 GYYDAGDNVKYGLPMAFTITTLAWSTITYEKELRATGELENARAAIRWGTDYFLKCASRK 140

Query:   143 NKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGXXXXXXXXXXXXXXXXVFRGVD 202
             N+LYVQVGDP  DHQCWARPE MKTPRTVL I  K PG                VFR VD
Sbjct:   141 NRLYVQVGDPNADHQCWARPENMKTPRTVLEISDKVPGTEIAAEAAAAFAASSIVFRHVD 200

Query:   203 RPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLE 262
               Y+RRLLNKAKLLF  A SHKGTYDGECPFYCS SGYNDEL+WAATWLY ATRN  YL 
Sbjct:   201 HKYARRLLNKAKLLFKLAKSHKGTYDGECPFYCSNSGYNDELIWAATWLYKATRNHLYLS 260

Query:   263 YIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYH 322
             Y+K ++ISA VAEFSWDLKYAGAQIL++++ FE G + L  +K QADS+VCS LP SPYH
Sbjct:   261 YLKFEAISAYVAEFSWDLKYAGAQILITKLIFE-GHKGLDLYKQQADSFVCSNLPGSPYH 319

Query:   323 QVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKK 382
             QV+ TPGG+IH RDGAN+QYVT TA LFS YAD+L KHNQKI+CG  QF S+ LMAFAKK
Sbjct:   320 QVFTTPGGMIHLRDGANSQYVTATAFLFSAYADILQKHNQKISCGSHQFDSTHLMAFAKK 379

Query:   383 QMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPNP 442
             Q+DY+LG NP+GRSYMVGFG +PP +AHHRGASVP+   N+ +SCP+SFV ++ KN+PN 
Sbjct:   380 QIDYILGHNPQGRSYMVGFGPNPPKQAHHRGASVPMHEANAPLSCPLSFVKWYNKNVPNA 439

Query:   443 NELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLAS 488
             NELTGAI+GGPD+ D F D RW    TEPCTY+NS+A+GVLAKLA+
Sbjct:   440 NELTGAILGGPDRQDKFQDLRWTSVYTEPCTYINSIAVGVLAKLAA 485
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
TAIR|locus:2118519 GH9B14 "glycosyl hydrolase 9B14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137824 GH9B13 "glycosyl hydrolase 9B13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017704 CEL5 "cellulase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825314 CEL3 "cellulase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059375 GH9B8 "glycosyl hydrolase 9B8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6K7G9GUN8_ORYSJ3, ., 2, ., 1, ., 40.65780.91480.9001yesno
Q8VYG3GUN16_ARATH3, ., 2, ., 1, ., 40.70600.94110.9547yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.991
3rd Layer3.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00032288001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (486 aa)
(Vitis vinifera)
Predicted Functional Partners:
BG1
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (504 aa)
     •  0.899
GSVIVG00028094001
SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (766 aa)
     •  0.899
GSVIVG00027626001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (262 aa)
     •  0.899
GSVIVG00024156001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (608 aa)
     •  0.899
GSVIVG00017795001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (507 aa)
     •  0.899
GSVIVG00006898001
SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (519 aa)
     •  0.899
GSVIVG00003779001
SubName- Full=Chromosome chr13 scaffold_149, whole genome shotgun sequence; (508 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
PLN02909486 PLN02909, PLN02909, Endoglucanase 0.0
PLN02613498 PLN02613, PLN02613, endoglucanase 0.0
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
PLN02171 629 PLN02171, PLN02171, endoglucanase 1e-174
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 1e-173
PLN02308492 PLN02308, PLN02308, endoglucanase 1e-163
PLN02340 614 PLN02340, PLN02340, endoglucanase 1e-162
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-158
PLN00119489 PLN00119, PLN00119, endoglucanase 1e-156
PLN03009495 PLN03009, PLN03009, cellulase 1e-155
PLN02345469 PLN02345, PLN02345, endoglucanase 1e-149
PLN02175484 PLN02175, PLN02175, endoglucanase 1e-147
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information 
 Score =  831 bits (2149), Expect = 0.0
 Identities = 340/487 (69%), Positives = 401/487 (82%), Gaps = 1/487 (0%)

Query: 3   MGTFAKASMAMIALTWPAFFQGLLFTVYANADFDYKDALGKSIIFLEAQRSGRLPPRHRP 62
               A  +  + ALT    +      V     F+YKDAL KSIIFLEAQRSG+LPP +R 
Sbjct: 1   TSNRAGRANVLAALTLLGLYGIPSLVVAVGTHFNYKDALTKSIIFLEAQRSGKLPPNNRV 60

Query: 63  AWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYHQELKSAGELQ 122
            WRGDS L+DGK ANVDLVGGYYDAGDNVKYGLPMAFT++TL+ S L Y +EL++ GEL+
Sbjct: 61  PWRGDSALDDGKLANVDLVGGYYDAGDNVKYGLPMAFTVTTLAWSTLAYEKELRATGELE 120

Query: 123 NVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGTE 182
           NV  AIRWGTDYFLK +SRKN+LYVQVGDP  DHQCW RPE MKTPRTVL ID KTPGTE
Sbjct: 121 NVRAAIRWGTDYFLKAASRKNRLYVQVGDPNLDHQCWVRPENMKTPRTVLEIDEKTPGTE 180

Query: 183 IAAETAAAMASASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYND 242
           IAAETAAAMA++S+VFR VD  YSRRLLNKAKLLF FA +HKGTYDGECPFYCSYSGYND
Sbjct: 181 IAAETAAAMAASSMVFRHVDHKYSRRLLNKAKLLFKFAKAHKGTYDGECPFYCSYSGYND 240

Query: 243 ELLWAATWLYMATRNPTYLEYIKEDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALA 302
           ELLWAATWLY AT+   YL+YIK ++ISA VAEFSWDLKYAGAQ+LLS++ FE   + L 
Sbjct: 241 ELLWAATWLYKATKKQMYLKYIKHEAISASVAEFSWDLKYAGAQVLLSKLNFEGE-KGLQ 299

Query: 303 NFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQ 362
           ++K QADS+VCSVLP SP+HQV++TPGG+IH RDGAN+QYVT TA LFS+Y+D+L +HNQ
Sbjct: 300 SYKQQADSFVCSVLPGSPFHQVFITPGGMIHLRDGANSQYVTSTAFLFSVYSDILRRHNQ 359

Query: 363 KITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVN 422
           K+ CG+QQF S++LMAFAK+Q+DYLLGANP+GRSYMVGFG +PP + HHRGASVP+   N
Sbjct: 360 KVMCGNQQFDSTRLMAFAKQQIDYLLGANPQGRSYMVGFGPNPPKQPHHRGASVPVLPAN 419

Query: 423 SGVSCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGV 482
           + V+C +SFV +F K+ PNPNELTGAIVGGPD+ DNF D+RW+   TEPCTY+NSLA+GV
Sbjct: 420 TPVNCGLSFVEWFNKDRPNPNELTGAIVGGPDRQDNFVDKRWNSSYTEPCTYINSLAVGV 479

Query: 483 LAKLASH 489
           LAKLA+ 
Sbjct: 480 LAKLAAR 486

Length = 486
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 493
PLN02909486 Endoglucanase 100.0
PLN02340 614 endoglucanase 100.0
PLN02266510 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN03009495 cellulase 100.0
PLN02345469 endoglucanase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.93
KOG2787403 consensus Lanthionine synthetase C-like protein 1 96.72
COG1331667 Highly conserved protein containing a thioredoxin 96.71
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 95.49
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 95.04
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 93.42
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 92.62
cd02892634 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; 90.17
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 86.24
TIGR03463634 osq_cycl 2,3-oxidosqualene cyclase. This model ide 84.78
>PLN02909 Endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=3.8e-124  Score=984.00  Aligned_cols=462  Identities=73%  Similarity=1.245  Sum_probs=432.7

Q ss_pred             hhhhccCChhhHHHHHHHHHHhHHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCccccCchHHHHHHHH
Q 037588           26 LFTVYANADFDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLS  105 (493)
Q Consensus        26 ~~~~~~~~~~~y~~~l~~sl~fy~~QR~G~~p~~~~~~w~~~~~~~dg~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~Ll  105 (493)
                      ...+....+++|.++|++||+||++||||.+|+.++++||++||++||.+.++||+|||||||||+||++|+++++++|+
T Consensus        24 ~~~~~~~~~~nY~~aL~~sl~Fy~aQRsG~lp~~~~~~Wr~ds~l~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~s~~~L~  103 (486)
T PLN02909         24 SLVVAVGTHFNYKDALTKSIIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLVGGYYDAGDNVKYGLPMAFTVTTLA  103 (486)
T ss_pred             hhhhccCCCCcHHHHHHHHHHHHHHhcCcCCCCCCCCCCCcccccccCCccccCCCCCceeCCCCceeCCchHHHHHHHH
Confidence            34446777899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhHHHHhcccChHHHHHHHHHHHHHHHhccCCCCeeEEEeCCCCCCCCCCCCCCCCCCCceEEecCCCCcchHHHH
Q 037588          106 LSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGTEIAA  185 (493)
Q Consensus       106 ~ay~~f~~~~~~~~~~pdlLdE~kwg~D~llk~~~~dg~~y~~vg~~~~dh~~w~~P~~~~~~R~v~~~~~~~p~t~~t~  185 (493)
                      |++++|++.|++.+++||||||+||++|||||||+.+|.||+|||++.+||.+|++||+++++|++|.|+.++|||++++
T Consensus       104 w~~~~y~~~~~~~g~~~d~ldeikw~~D~llk~~~~~~~~y~qVg~~~~Dh~~W~~Pe~~~~~R~~~~i~~~~pgtd~a~  183 (486)
T PLN02909        104 WSTLAYEKELRATGELENVRAAIRWGTDYFLKAASRKNRLYVQVGDPNLDHQCWVRPENMKTPRTVLEIDEKTPGTEIAA  183 (486)
T ss_pred             HHHHHhHHHHhhcCChHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCCCcccCCChhhccCCceeEecCCCCCCcHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccCCCCCcchHHHHHHHHHHHHcCChhHHHHHH
Q 037588          186 ETAAAMASASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIK  265 (493)
Q Consensus       186 ~~AAalA~as~v~~~~d~~~A~~~l~~A~~a~~~a~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTg~~~Y~~~~~  265 (493)
                      ++|||||++|||||++||+||++||++||++|+||+++|+.|....++|.+.++|.||++|||+|||++|||++|+++++
T Consensus       184 ~~AAAlA~as~vfk~~D~~yA~~lL~~Ak~~y~fA~~~~g~y~~~~~~y~s~s~y~DEl~WAAawLy~aTgd~~Yl~~~~  263 (486)
T PLN02909        184 ETAAAMAASSMVFRHVDHKYSRRLLNKAKLLFKFAKAHKGTYDGECPFYCSYSGYNDELLWAATWLYKATKKQMYLKYIK  263 (486)
T ss_pred             HHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCccccCCCcchHHHHHHHHHHHHhCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999877678898768899999999999999999999999998


Q ss_pred             hccccccccccccchhhhHHHHhhcccccccchHHHHHHHHHHHHHHHhhCCCCCCCccccCCCcceeccCCChHHHHHH
Q 037588          266 EDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQYVTG  345 (493)
Q Consensus       266 ~~~~~~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~wg~~~~a~~  345 (493)
                      ..........|+||++..+++++|+++... .+..++.|++.+|.++|..+++++++.+.+||+|+.|...|+|+||+++
T Consensus       264 ~~~~~~~~~~~sWD~k~~g~~~lLa~~~~~-~~~~~~~y~~~ad~~~~~~~~~~~~~~~~~TpgGl~~~~~wgn~rya~~  342 (486)
T PLN02909        264 HEAISASVAEFSWDLKYAGAQVLLSKLNFE-GEKGLQSYKQQADSFVCSVLPGSPFHQVFITPGGMIHLRDGANSQYVTS  342 (486)
T ss_pred             hcccccCCCccCCcccccHHHHHHHHhhcc-cchhHHHHHHHHHHHHHHhccCCCCcccccCCCceeEecCCChHHHHHH
Confidence            754333345699999999999999986543 2345678999999999988888888878999999999999999999999


Q ss_pred             HHHHHHHhHHHHhhcccccccCCCCCChHHHHHHHHhhcccccCCCCCCCceEeecCCCCCCCCCCCCCCCCCcccCCCC
Q 037588          346 TALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGV  425 (493)
Q Consensus       346 ~afl~~~~a~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~NP~~~SyVtG~G~~~p~~pHHr~s~~~~~~~~~~~  425 (493)
                      ++||+++|++++.....++.|++...++++|+++|++|||||||+||+++|||||||.|+|++||||.+|||..+.+..|
T Consensus       343 aafLa~~ya~~l~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~NP~~~SYVVGfG~n~P~~pHHR~as~~~~~~~~~~  422 (486)
T PLN02909        343 TAFLFSVYSDILRRHNQKVMCGNQQFDSTRLMAFAKQQIDYLLGANPQGRSYMVGFGPNPPKQPHHRGASVPVLPANTPV  422 (486)
T ss_pred             HHHHHHHHHHHHhhcccccccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCceEeccCCCCcCCccccccCCCCcccCccc
Confidence            99999999999877667799999889999999999999999999999999999999999999999999999986555789


Q ss_pred             CCCCCccccccCCCCCCCCccceeecCCCCCCCccccCCcccccccccCCchHHHHHHHHHhc
Q 037588          426 SCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLAS  488 (493)
Q Consensus       426 ~c~~g~~~~~~~~~~~~~~~~GalvGGPn~~~~y~D~~~~~~~nEvaid~NA~~v~~la~l~~  488 (493)
                      .|.+||.+|++.+.|||++|+|||||||+.+|.|.|+|.+|++|||||||||+||++||+|..
T Consensus       423 ~c~~g~~~~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y~~nE~a~dyNA~~vg~lA~l~~  485 (486)
T PLN02909        423 NCGLSFVEWFNKDRPNPNELTGAIVGGPDRQDNFVDKRWNSSYTEPCTYINSLAVGVLAKLAA  485 (486)
T ss_pred             CCCCcccccccCCCCCcceeccceecCCCCCCCccccccccccCcceeecchHHHHHHHHHhc
Confidence            999999889999999999999999999999999999999999999999999999999999975

>PLN02340 endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 6e-72
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 6e-67
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 9e-67
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 1e-56
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 1e-54
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 1e-54
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 5e-48
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 1e-39
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 3e-08
1clc_A639 Three-Dimensional Structure Of Endoglucanase D At 1 5e-07
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  268 bits (684), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 170/468 (36%), Positives = 234/468 (50%), Gaps = 54/468 (11%)
Query: 35  FDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYG 94
           +DYK  L  S++F EAQRSGRLP   +  WR DS L D      DL GGY+DAGD VK+G
Sbjct: 3   YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFG 62
Query: 95  LPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQ 154
            PMA+T + L+   + +     SAG L +   A++W TDYF+K  + +N+ Y QVG    
Sbjct: 63  FPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDA 122
Query: 155 DHQCWARPEEMKTPRTVLMIDSKTPGXXXXXXXXXXXXXXXXVFRGVDRPYSRRLLNKAK 214
           DH  W RPE+M   R    ID+  PG                VFR VD  YS  LL  A+
Sbjct: 123 DHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHAR 182
Query: 215 LLFHFANSHKGTYDGECP----FYCSYSGYNDELLWAATWLYMATRNPTYLEYIK----E 266
            LF FAN+++G Y         FY S + Y DEL+WAA WLY AT + TYL   +    E
Sbjct: 183 QLFDFANNYRGKYSDSITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYDE 241
Query: 267 DSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYM 326
             +       +WD K +G Q+LL+++   +  QA   +K+   SYV  ++          
Sbjct: 242 FGLQNWGGGLNWDSKVSGVQVLLAKL---TNKQA---YKDTVQSYVNYLINNQQ-----K 290
Query: 327 TPGGLIH------YRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFA 380
           TP GL++       R  ANA ++                    +   +    +S    FA
Sbjct: 291 TPKGLLYIDMWGTLRHAANAAFIM-------------------LEAAELGLSASSYRQFA 331
Query: 381 KKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMP 440
           + Q+DY LG    GRS++ GFG +PPTR HHR +S P     +  +C     N F    P
Sbjct: 332 QTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPP----APATCDW---NTFNSPDP 382
Query: 441 NPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLAS 488
           N + L+GA+VGGPD++DN+ D+R D    E  T  N+     LA L +
Sbjct: 383 NYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVA 430
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure
>pdb|1CLC|A Chain A, Three-Dimensional Structure Of Endoglucanase D At 1.9 Angstroms Resolution Length = 639 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-158
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-156
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-154
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-153
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-150
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-145
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-136
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-126
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-118
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 1e-67
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
 Score =  461 bits (1188), Expect = e-158
 Identities = 168/469 (35%), Positives = 240/469 (51%), Gaps = 43/469 (9%)

Query: 35  FDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYG 94
           F+Y +AL KS+ F EAQRSG+LP  +R +WRGDSGL DG    +DL GG+YDAGD+VK+G
Sbjct: 4   FNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFG 63

Query: 95  LPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQ 154
            PMAFT + L+  A+   +    +G++  + D +RW  DYF+K     N LYVQVGD   
Sbjct: 64  FPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDA 123

Query: 155 DHQCWARPEEMKTPRTVLMIDSKTPGTEIAAETAAAMASASIVFRGVDRPYSRRLLNKAK 214
           DH+ W   E M   R    +D   PG+++AAETAAAMA++SIVF   D  Y+  L+  AK
Sbjct: 124 DHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAK 183

Query: 215 LLFHFANSHKGTYD---GECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIK------ 265
            L+ FA++++G Y        FY S+SGY DEL+W A WLY AT + +YL   +      
Sbjct: 184 QLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFL 243

Query: 266 ----EDSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPY 321
               +  + +     +WD K  G  +LL++            + + A+ ++         
Sbjct: 244 STEQQTDLRSYRWTIAWDDKSYGTYVLLAKET------GKQKYIDDANRWLDYWTVGVNG 297

Query: 322 HQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAK 381
            +V  +PGG+         +Y   TA +  +YA V+          D      +   FA 
Sbjct: 298 QRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVI----------DDPVRKQRYHDFAV 347

Query: 382 KQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPN 441
           +Q++Y LG NPR  SY+VGFG +PP   HHR A               S+ +       N
Sbjct: 348 RQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH-------------GSWTDSIASPAEN 394

Query: 442 PNELTGAIVGGPD-KHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLASH 489
            + L GA+VGGP   +D + D+R D    E  T  N+     LA L   
Sbjct: 395 RHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEE 443
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 96.72
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.34
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 95.82
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 94.02
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 93.9
3k11_A445 Putative glycosyl hydrolase; structural genomics, 92.85
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 92.39
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 91.87
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 91.02
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 90.89
1nc5_A373 Hypothetical protein YTER; structural genomics, he 88.3
3k11_A445 Putative glycosyl hydrolase; structural genomics, 86.5
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 83.17
3pmm_A382 Putative cytoplasmic protein; structural genomics, 82.32
1w6k_A732 Lanosterol synthase; cyclase, cholesterol, monotop 81.92
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 80.33
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
Probab=100.00  E-value=2.9e-111  Score=890.10  Aligned_cols=416  Identities=32%  Similarity=0.549  Sum_probs=377.2

Q ss_pred             ChhhHHHHHHHHHHhHHHhcCCCCCC-CCCCCCCCCCCCCCCCCcccccccceecCCCCccccCchHHHHHHHHHHHHHh
Q 037588           33 ADFDYKDALGKSIIFLEAQRSGRLPP-RHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYY  111 (493)
Q Consensus        33 ~~~~y~~~l~~sl~fy~~QR~G~~p~-~~~~~w~~~~~~~dg~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~Ll~ay~~f  111 (493)
                      +.++|.++|++||+||++||||++|+ .++++||++||++||++.++||+|||||||||+||++|+++++++|+|+++||
T Consensus         2 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~   81 (441)
T 1ia6_A            2 GTHDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDVGVDLTGGYHDAGDHVKFGLPQGYSAAILGWSLYEF   81 (441)
T ss_dssp             CCCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTTTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHC
T ss_pred             ccchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCCcccCCCCeeeCCCCCeeccchHHHHHHHHHHHHHh
Confidence            46899999999999999999999887 88999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcccChHHHHHHHHHHHHHHHhccCCCCeeEEEeCCCCCCCCCCCCCCCCCCCceE-EecCCCCcchHHHHHHHHH
Q 037588          112 HQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTV-LMIDSKTPGTEIAAETAAA  190 (493)
Q Consensus       112 ~~~~~~~~~~pdlLdE~kwg~D~llk~~~~dg~~y~~vg~~~~dh~~w~~P~~~~~~R~v-~~~~~~~p~t~~t~~~AAa  190 (493)
                      ++.|+..+++||||||||||+|||||||+++|.||+|||++..||.+|++||+++++|++ |.++.++|+|++++++|||
T Consensus        82 ~~~~~~~g~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAa  161 (441)
T 1ia6_A           82 KESFDATGNTTKMLQQLKYFTDYFLKSHPNSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAA  161 (441)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHH
T ss_pred             HHHHhhcCcHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999 9999999999999999999


Q ss_pred             HHHHhhhccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHhcccc
Q 037588          191 MASASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIKEDSIS  270 (493)
Q Consensus       191 lA~as~v~~~~d~~~A~~~l~~A~~a~~~a~~~~~~~~~~~~~Y~s~~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~~~~~  270 (493)
                      ||+||||||++||+||++||++||++|+||+++|+.+. .+++|+| +++.||++|||+|||++||+++|++++++....
T Consensus       162 lAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~-~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~a~~~~~~  239 (441)
T 1ia6_A          162 LTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN-GQSFYQA-TSFGDDLAWAATWLYTATNDSTYITDAEQFITL  239 (441)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC-CTTTSCC-CCSHHHHHHHHHHHHHHHCCTHHHHHHHHHTTC
T ss_pred             HHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC-CCCCCCC-CCchhHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999998754 5789999 999999999999999999999999999875321


Q ss_pred             ---------ccccccccchhhhHHHHhhcccccccchHHHHHHHHHHHHHHHhhCCCCCCCccccCCCcceeccCCChHH
Q 037588          271 ---------AIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGANAQ  341 (493)
Q Consensus       271 ---------~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~wg~~~  341 (493)
                               .....|+||++..++.++|+++..  ...    +++.++.+++.++     ..+++||+|+.|...|||++
T Consensus       240 ~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~--~~~----~~~~~~~~~~~~~-----~~~~~tp~Gl~~~~~WGs~~  308 (441)
T 1ia6_A          240 GNTMNENKMQDKWTMCWDDMYVPAALRLAQITG--KQI----YKDAIEFNFNYWK-----TQVTTTPGGLKWLSNWGVLR  308 (441)
T ss_dssp             ------CGGGCSSCSSSSCCHHHHHHHHHHHHC--CHH----HHHHHHHHHHHHH-----HTSCBCTTSCBCCCSTTHHH
T ss_pred             hhhcccccccCCCcCCccchHHHHHHHHHhccC--cHH----HHHHHHHHHHHHH-----hhcccCCCCceecCCcchHH
Confidence                     124578999999999999887643  223    3444444333332     13678999999989999999


Q ss_pred             HHHHHHHHHHHhHHHHhhcccccccCCCCCChHHHHHHHHhhcccccCCCCCCCceEeecCCCCCCCCCCCCCCCCCccc
Q 037588          342 YVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENV  421 (493)
Q Consensus       342 ~a~~~afl~~~~a~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~NP~~~SyVtG~G~~~p~~pHHr~s~~~~~~~  421 (493)
                      |+++++|+++++++++              ++++|+++|++|||||||+||+++|||||||.|+|++||||.++|+... 
T Consensus       309 ~~~~~a~l~~~~~~~~--------------~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~~~~-  373 (441)
T 1ia6_A          309 YAAAESMVMLVYCKQN--------------PDQSLLDLAKKQVDYILGDNPANMSYIIGYGSNWCIHPHHRAANGYTYA-  373 (441)
T ss_dssp             HHHHHHHHHHHHHHHS--------------CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCBCHHHHCCCCC-
T ss_pred             HHHHHHHHHHHHHhhc--------------CHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCCCcChhhccCCcc-
Confidence            9999999999998863              4689999999999999999999999999999999999999999876521 


Q ss_pred             CCCCCCCCCccccccCCCCCCCCccceeecCCCCCCCccccCCcccccccccCCchHHHHHHHHHhc
Q 037588          422 NSGVSCPMSFVNFFLKNMPNPNELTGAIVGGPDKHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLAS  488 (493)
Q Consensus       422 ~~~~~c~~g~~~~~~~~~~~~~~~~GalvGGPn~~~~y~D~~~~~~~nEvaid~NA~~v~~la~l~~  488 (493)
                                  +++.+.|||++|+|+||||||..|+|.|+|.+|++|||||||||+||++||+|..
T Consensus       374 ------------~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~  428 (441)
T 1ia6_A          374 ------------NGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLVGVLAGAIK  428 (441)
T ss_dssp             --------------CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHHHHHHHHHHHHH
T ss_pred             ------------ccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhHHHHHHHHHHHH
Confidence                        3467889999999999999999999999999999999999999999999999975
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A* Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 493
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-152
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-145
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-141
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-137
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-107
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-104
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  440 bits (1133), Expect = e-152
 Identities = 168/469 (35%), Positives = 241/469 (51%), Gaps = 43/469 (9%)

Query: 35  FDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYG 94
           F+Y +AL KS+ F EAQRSG+LP  +R +WRGDSGL DG    +DL GG+YDAGD+VK+G
Sbjct: 4   FNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFG 63

Query: 95  LPMAFTISTLSLSALYYHQELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQ 154
            PMAFT + L+  A+   +    +G++  + D +RW  DYF+K     N LYVQVGD   
Sbjct: 64  FPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDA 123

Query: 155 DHQCWARPEEMKTPRTVLMIDSKTPGTEIAAETAAAMASASIVFRGVDRPYSRRLLNKAK 214
           DH+ W   E M   R    +D   PG+++AAETAAAMA++SIVF   D  Y+  L+  AK
Sbjct: 124 DHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAK 183

Query: 215 LLFHFANSHKGTYD---GECPFYCSYSGYNDELLWAATWLYMATRNPTYLEYIKE----- 266
            L+ FA++++G Y        FY S+SGY DEL+W A WLY AT + +YL   +      
Sbjct: 184 QLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFL 243

Query: 267 -----DSISAIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPY 321
                  + +     +WD K  G  +LL++      +     + + A+ ++         
Sbjct: 244 STEQQTDLRSYRWTIAWDDKSYGTYVLLAK------ETGKQKYIDDANRWLDYWTVGVNG 297

Query: 322 HQVYMTPGGLIHYRDGANAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAK 381
            +V  +PGG+         +Y   TA +  +YA V+    +K           +   FA 
Sbjct: 298 QRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDPVRK----------QRYHDFAV 347

Query: 382 KQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPLENVNSGVSCPMSFVNFFLKNMPN 441
           +Q++Y LG NPR  SY+VGFG +PP   HHR A               S+ +       N
Sbjct: 348 RQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH-------------GSWTDSIASPAEN 394

Query: 442 PNELTGAIVGGPD-KHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLASH 489
            + L GA+VGGP   +D + D+R D    E  T  N+     LA L   
Sbjct: 395 RHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEE 443
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 95.43
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 92.83
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 87.97
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 86.9
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 82.68
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=2.6e-105  Score=849.49  Aligned_cols=427  Identities=38%  Similarity=0.644  Sum_probs=377.1

Q ss_pred             ChhhHHHHHHHHHHhHHHhcCCCCCCCCCCCCCCCCCCCCCCCcccccccceecCCCCccccCchHHHHHHHHHHHHHhH
Q 037588           33 ADFDYKDALGKSIIFLEAQRSGRLPPRHRPAWRGDSGLEDGKQANVDLVGGYYDAGDNVKYGLPMAFTISTLSLSALYYH  112 (493)
Q Consensus        33 ~~~~y~~~l~~sl~fy~~QR~G~~p~~~~~~w~~~~~~~dg~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~Ll~ay~~f~  112 (493)
                      ++.+|.++|+++|+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++|+
T Consensus         2 ~~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~   81 (460)
T d1tf4a1           2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP   81 (460)
T ss_dssp             CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred             CCCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHCh
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcccChHHHHHHHHHHHHHHHhccCCCCeeEEEeCCCCCCCCCCCCCCCCCCCceEEecCCCCcchHHHHHHHHHHH
Q 037588          113 QELKSAGELQNVMDAIRWGTDYFLKTSSRKNKLYVQVGDPVQDHQCWARPEEMKTPRTVLMIDSKTPGTEIAAETAAAMA  192 (493)
Q Consensus       113 ~~~~~~~~~pdlLdE~kwg~D~llk~~~~dg~~y~~vg~~~~dh~~w~~P~~~~~~R~v~~~~~~~p~t~~t~~~AAalA  192 (493)
                      +.|+++|++||||||+|||+|||+|||+++|.||+|||++..||..|++|+.++.+|+.+.+....|+|++++++||+||
T Consensus        82 ~~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA  161 (460)
T d1tf4a1          82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA  161 (460)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred             HhhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999988999999999999999999988888899999999999999


Q ss_pred             HHhhhccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCC---CC-ccCCCCCcchHHHHHHHHHHHHcCChhHHHHHHhcc
Q 037588          193 SASIVFRGVDRPYSRRLLNKAKLLFHFANSHKGTYDGE---CP-FYCSYSGYNDELLWAATWLYMATRNPTYLEYIKEDS  268 (493)
Q Consensus       193 ~as~v~~~~d~~~A~~~l~~A~~a~~~a~~~~~~~~~~---~~-~Y~s~~~~~De~~wAA~~Ly~aTg~~~Y~~~~~~~~  268 (493)
                      +|||||+++||+||++||++||++|+||+++|+.|.+.   ++ +|++ +++.||++|||+|||++|||++|++++++..
T Consensus       162 ~as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~~~~~~~~-~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~~  240 (460)
T d1tf4a1         162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSW-SGYQDELVWGAYWLYKATGDDSYLAKAEYEY  240 (460)
T ss_dssp             HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCS-SCSHHHHHHHHHHHHHHHCCHHHHHHHHHHG
T ss_pred             HHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCcCCCc-cccchHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence            99999999999999999999999999999999887542   22 3555 8899999999999999999999999998653


Q ss_pred             cc----------ccccccccchhhhHHHHhhcccccccchHHHHHHHHHHHHHHHhhCCCCCCCccccCCCcceeccCCC
Q 037588          269 IS----------AIVAEFSWDLKYAGAQILLSEMFFESGDQALANFKNQADSYVCSVLPESPYHQVYMTPGGLIHYRDGA  338 (493)
Q Consensus       269 ~~----------~~~~~~~Wd~~~~~~~~lla~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~wg  338 (493)
                      ..          .....++|+++..+..++++....      +..+++.++.+++.+........++++++++.|...||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WG  314 (460)
T d1tf4a1         241 DFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETG------KQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTWG  314 (460)
T ss_dssp             GGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHHC------CHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCSSS
T ss_pred             hhcccccccccccccccccccchhHHHHHHHHHHhh------hhHHHHHHHHHHHHHhhhcccccCCcCCCcceecCCCc
Confidence            21          113357899998888877765432      23345566666655444333234678899999999999


Q ss_pred             hHHHHHHHHHHHHHhHHHHhhcccccccCCCCCChHHHHHHHHhhcccccCCCCCCCceEeecCCCCCCCCCCCCCCCCC
Q 037588          339 NAQYVTGTALLFSIYADVLAKHNQKITCGDQQFGSSQLMAFAKKQMDYLLGANPRGRSYMVGFGKDPPTRAHHRGASVPL  418 (493)
Q Consensus       339 ~~~~a~~~afl~~~~a~~~~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~NP~~~SyVtG~G~~~p~~pHHr~s~~~~  418 (493)
                      ++++++|.++++++++++..+          ..++++|+++|++|||||||+||+++|||||+|.|+|++||||.++|+.
T Consensus       315 sn~~~~n~a~~~~~a~~~~~~----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~~  384 (460)
T d1tf4a1         315 ALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSW  384 (460)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTCS
T ss_pred             hHHHHHHHHHHHHHHHHHhcc----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCccccCCC
Confidence            999999999999998876432          1345799999999999999999999999999999999999999988654


Q ss_pred             cccCCCCCCCCCccccccCCCCCCCCccceeecCCC-CCCCccccCCcccccccccCCchHHHHHHHHHhcC
Q 037588          419 ENVNSGVSCPMSFVNFFLKNMPNPNELTGAIVGGPD-KHDNFNDERWDGPMTEPCTYVNSLAIGVLAKLASH  489 (493)
Q Consensus       419 ~~~~~~~~c~~g~~~~~~~~~~~~~~~~GalvGGPn-~~~~y~D~~~~~~~nEvaid~NA~~v~~la~l~~~  489 (493)
                      .+             +...+.|||++++|+|||||| +.+||+|++++|++|||||||||+||++||+|++.
T Consensus       385 ~~-------------~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~  443 (460)
T d1tf4a1         385 TD-------------SIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEE  443 (460)
T ss_dssp             SS-------------CTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHH
T ss_pred             cc-------------ccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            22             345688999999999999999 58999999999999999999999999999999764
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure